Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012143.t1 | XP_024629125.1 | 99 | 715 | 5 | 1 | 1 | 715 | 1 | 713 | 0.00E+00 | 1158.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012143.t1 | Q9M1H3 | 75.8 | 724 | 165 | 3 | 1 | 715 | 1 | 723 | 1.8e-282 | 973.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012143.t1 | G7LB54 | 99.0 | 715 | 5 | 1 | 1 | 715 | 54 | 766 | 0.0e+00 | 1158.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene054719 | MS.gene012143 | PPI |
| MS.gene40858 | MS.gene012143 | PPI |
| MS.gene69745 | MS.gene012143 | PPI |
| MS.gene31234 | MS.gene012143 | PPI |
| MS.gene044268 | MS.gene012143 | PPI |
| MS.gene028666 | MS.gene012143 | PPI |
| MS.gene70530 | MS.gene012143 | PPI |
| MS.gene050086 | MS.gene012143 | PPI |
| MS.gene98065 | MS.gene012143 | PPI |
| MS.gene25771 | MS.gene012143 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012143.t1 | MTR_8g075040 | 99.161 | 715 | 4 | 1 | 1 | 715 | 54 | 766 | 0.0 | 1440 |
| MS.gene012143.t1 | MTR_7g018380 | 98.182 | 715 | 13 | 0 | 1 | 715 | 1 | 715 | 0.0 | 1431 |
| MS.gene012143.t1 | MTR_1g066620 | 91.622 | 561 | 45 | 2 | 156 | 715 | 2 | 561 | 0.0 | 1057 |
| MS.gene012143.t1 | MTR_3g080970 | 39.645 | 676 | 358 | 14 | 41 | 705 | 74 | 710 | 1.72e-154 | 465 |
| MS.gene012143.t1 | MTR_2g095440 | 41.155 | 554 | 293 | 6 | 152 | 705 | 62 | 582 | 1.77e-149 | 448 |
| MS.gene012143.t1 | MTR_2g095440 | 40.942 | 552 | 293 | 6 | 154 | 705 | 4 | 522 | 1.53e-148 | 443 |
| MS.gene012143.t1 | MTR_2g095440 | 41.091 | 550 | 291 | 6 | 156 | 705 | 12 | 528 | 1.84e-148 | 443 |
| MS.gene012143.t1 | MTR_4g057795 | 41.155 | 554 | 293 | 7 | 152 | 705 | 62 | 582 | 4.14e-146 | 439 |
| MS.gene012143.t1 | MTR_4g057795 | 40.873 | 504 | 265 | 7 | 202 | 705 | 2 | 472 | 1.36e-129 | 393 |
| MS.gene012143.t1 | MTR_3g095010 | 29.561 | 592 | 366 | 14 | 144 | 715 | 96 | 656 | 5.17e-62 | 220 |
| MS.gene012143.t1 | MTR_1g063170 | 30.332 | 211 | 112 | 7 | 482 | 666 | 393 | 594 | 1.36e-13 | 75.1 |
| MS.gene012143.t1 | MTR_7g102070 | 30.332 | 211 | 112 | 7 | 482 | 666 | 420 | 621 | 2.25e-13 | 74.7 |
| MS.gene012143.t1 | MTR_4g124050 | 31.313 | 198 | 82 | 7 | 493 | 655 | 1055 | 1233 | 2.79e-13 | 74.3 |
| MS.gene012143.t1 | MTR_3g107800 | 31.034 | 203 | 86 | 7 | 488 | 655 | 1026 | 1209 | 1.29e-12 | 72.0 |
| MS.gene012143.t1 | MTR_6g011680 | 31.441 | 229 | 118 | 10 | 488 | 691 | 1008 | 1222 | 2.18e-12 | 71.2 |
| MS.gene012143.t1 | MTR_5g029750 | 28.509 | 228 | 126 | 10 | 488 | 691 | 989 | 1203 | 4.20e-12 | 70.5 |
| MS.gene012143.t1 | MTR_8g022270 | 26.786 | 224 | 135 | 7 | 488 | 691 | 598 | 812 | 1.27e-11 | 68.9 |
| MS.gene012143.t1 | MTR_3g093430 | 30.213 | 235 | 113 | 9 | 488 | 691 | 364 | 578 | 1.32e-11 | 68.9 |
| MS.gene012143.t1 | MTR_8g107410 | 30.144 | 209 | 105 | 6 | 167 | 366 | 34 | 210 | 2.52e-11 | 65.1 |
| MS.gene012143.t1 | MTR_7g079540 | 36.646 | 161 | 78 | 6 | 505 | 643 | 101 | 259 | 2.83e-11 | 65.9 |
| MS.gene012143.t1 | MTR_7g079540 | 36.646 | 161 | 78 | 6 | 505 | 643 | 101 | 259 | 4.18e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012143.t1 | AT3G54540 | 78.404 | 727 | 141 | 6 | 1 | 715 | 1 | 723 | 0.0 | 1136 |
| MS.gene012143.t1 | AT3G54540 | 78.404 | 727 | 141 | 6 | 1 | 715 | 1 | 723 | 0.0 | 1136 |
| MS.gene012143.t1 | AT1G64550 | 39.435 | 672 | 346 | 14 | 52 | 705 | 83 | 711 | 5.80e-156 | 469 |
| MS.gene012143.t1 | AT5G60790 | 41.441 | 555 | 290 | 7 | 152 | 705 | 67 | 587 | 7.54e-147 | 441 |
| MS.gene012143.t1 | AT5G64840 | 28.998 | 569 | 367 | 9 | 145 | 703 | 89 | 630 | 7.44e-65 | 228 |
| MS.gene012143.t1 | AT5G09930 | 30.366 | 573 | 356 | 14 | 144 | 703 | 74 | 616 | 6.18e-62 | 220 |
| MS.gene012143.t1 | AT1G67940 | 32.558 | 215 | 103 | 9 | 161 | 366 | 37 | 218 | 2.75e-13 | 71.2 |
| MS.gene012143.t1 | AT3G28345 | 30.556 | 216 | 124 | 7 | 481 | 673 | 988 | 1200 | 3.79e-13 | 73.9 |
| MS.gene012143.t1 | AT2G36910 | 30.097 | 206 | 109 | 7 | 487 | 666 | 367 | 563 | 4.54e-13 | 73.6 |
| MS.gene012143.t1 | AT3G28390 | 31.718 | 227 | 112 | 10 | 493 | 691 | 985 | 1196 | 6.75e-13 | 73.2 |
| MS.gene012143.t1 | AT3G28860 | 31.222 | 221 | 121 | 9 | 492 | 691 | 1014 | 1224 | 1.97e-11 | 68.2 |
| MS.gene012143.t1 | AT1G70610 | 31.792 | 173 | 104 | 4 | 488 | 646 | 455 | 627 | 2.26e-11 | 67.8 |
| MS.gene012143.t1 | AT1G70610 | 30.337 | 178 | 100 | 5 | 488 | 646 | 274 | 446 | 2.35e-11 | 67.4 |
| MS.gene012143.t1 | AT1G65410 | 27.723 | 202 | 104 | 5 | 166 | 354 | 97 | 269 | 3.09e-11 | 65.9 |
| MS.gene012143.t1 | AT4G25960 | 28.431 | 204 | 113 | 8 | 488 | 666 | 1030 | 1225 | 3.53e-11 | 67.4 |
| MS.gene012143.t1 | AT2G47000 | 28.958 | 259 | 118 | 10 | 488 | 710 | 1042 | 1270 | 5.11e-11 | 67.0 |
| MS.gene012143.t1 | AT2G47000 | 28.958 | 259 | 118 | 10 | 488 | 710 | 1042 | 1270 | 5.11e-11 | 67.0 |
| MS.gene012143.t1 | AT2G47000 | 28.958 | 259 | 118 | 10 | 488 | 710 | 1042 | 1270 | 5.11e-11 | 67.0 |
| MS.gene012143.t1 | AT3G28380 | 28.502 | 207 | 111 | 7 | 488 | 666 | 995 | 1192 | 7.24e-11 | 66.2 |
| MS.gene012143.t1 | AT1G10680 | 26.609 | 233 | 128 | 10 | 488 | 690 | 982 | 1201 | 9.33e-11 | 66.2 |
Find 168 sgRNAs with CRISPR-Local
Find 193 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTGCAAAACTTGGTAAATA+TGG | 0.195660 | 8.4:-29973595 | MS.gene012143:CDS |
| CAGTGTATGCAGAAGCTTTC+GGG | 0.221638 | 8.4:+29975198 | None:intergenic |
| GAAGCTTTCGGGGCAGGTTT+TGG | 0.249610 | 8.4:+29975209 | None:intergenic |
| ATGAAGAACGGAGTCAAATA+TGG | 0.285206 | 8.4:-29973339 | MS.gene012143:CDS |
| GATGCTTTCACTGTTGTAAT+TGG | 0.287671 | 8.4:-29974987 | MS.gene012143:CDS |
| AGGCAAAGAAGGAAGCTCTT+AGG | 0.295120 | 8.4:-29975019 | MS.gene012143:CDS |
| CTCTGCCATGTTGGCAGGTA+TGG | 0.307869 | 8.4:-29975279 | MS.gene012143:CDS |
| TGTTGATGTTGGCATTGATA+TGG | 0.325155 | 8.4:-29973848 | MS.gene012143:CDS |
| GGAAAACGTTATGGTTTGAT+TGG | 0.326176 | 8.4:-29974834 | MS.gene012143:CDS |
| AAAAGCTGATAAGCCTAAAA+AGG | 0.327285 | 8.4:-29975252 | MS.gene012143:CDS |
| TAAGAATATTGATGTCCTTC+TGG | 0.328294 | 8.4:-29974748 | MS.gene012143:CDS |
| ACTTGTGTGGTACCTCTACT+TGG | 0.330518 | 8.4:+29973989 | None:intergenic |
| AGCTGCCCATGTGGCTGAAC+AGG | 0.335346 | 8.4:-29975039 | MS.gene012143:CDS |
| GCCTAAAATCCTCTCGGTTT+GGG | 0.340199 | 8.4:+29973878 | None:intergenic |
| ACCTCAAGTGGCTTCAAATC+TGG | 0.342071 | 8.4:+29975110 | None:intergenic |
| TGCATATCCAGATGATTTGT+AGG | 0.356331 | 8.4:+29973457 | None:intergenic |
| TTGTAATCCTCAAATGTTCC+AGG | 0.358592 | 8.4:+29973286 | None:intergenic |
| ATCTTGTTGAGCCTTGTTCC+CGG | 0.359673 | 8.4:+29974098 | None:intergenic |
| AGAAGGACATCAATATTCTT+AGG | 0.370684 | 8.4:+29974750 | None:intergenic |
| GAATCTTCTAGCTGGTGATT+TGG | 0.379502 | 8.4:-29973773 | MS.gene012143:CDS |
| TCTGTCTCTGCCATGTTGGC+AGG | 0.382181 | 8.4:-29975284 | MS.gene012143:CDS |
| ATATCTCATGGAAAACGTTA+TGG | 0.390477 | 8.4:-29974843 | MS.gene012143:CDS |
| TTGAAAGCAGCTAGAAGAAC+CGG | 0.393435 | 8.4:-29974117 | MS.gene012143:CDS |
| AGCCTAAAATCCTCTCGGTT+TGG | 0.396484 | 8.4:+29973877 | None:intergenic |
| TCAGTGTATGCAGAAGCTTT+CGG | 0.398636 | 8.4:+29975197 | None:intergenic |
| CACTGTTGTAATTGGAAGTC+GGG | 0.401671 | 8.4:-29974979 | MS.gene012143:CDS |
| GTTGCCATCGTTGGGCCTAA+TGG | 0.402218 | 8.4:-29973817 | MS.gene012143:CDS |
| GGTGTGAGTTCAGTGGGTTC+AGG | 0.404849 | 8.4:+29973937 | None:intergenic |
| GGGACTCGTGTTGCCATCGT+TGG | 0.415761 | 8.4:-29973826 | MS.gene012143:CDS |
| CTTCGAACTTCACCTTCACT+TGG | 0.420634 | 8.4:+29973748 | None:intergenic |
| TTACTAAGCCCCTCCTGGTC+TGG | 0.421538 | 8.4:+29973631 | None:intergenic |
| TCTTTGCCTGTTCAGCCACA+TGG | 0.423166 | 8.4:+29975033 | None:intergenic |
| GGCAAAGAAGGAAGCTCTTA+GGG | 0.426538 | 8.4:-29975018 | MS.gene012143:CDS |
| GAAAACGTTATGGTTTGATT+GGG | 0.428668 | 8.4:-29974833 | MS.gene012143:CDS |
| GATCTACAAAATATAGCTTC+TGG | 0.431690 | 8.4:-29974633 | MS.gene012143:CDS |
| CCTGGTTTAGCCTTTGAAGA+TGG | 0.434308 | 8.4:+29975338 | None:intergenic |
| GAGATATTCCCAACACTTTG+TGG | 0.436079 | 8.4:-29973704 | MS.gene012143:CDS |
| GAAGTCAGAAGTTGAGGATA+GGG | 0.442070 | 8.4:-29973726 | MS.gene012143:CDS |
| CCTCCTGATAGTTTGACAAT+GGG | 0.445696 | 8.4:+29973547 | None:intergenic |
| CACTAATCATCTTGACTTGA+GGG | 0.447004 | 8.4:-29974355 | MS.gene012143:CDS |
| TATGCAGAAGCTTTCGGGGC+AGG | 0.452904 | 8.4:+29975203 | None:intergenic |
| GTGTTTCATCCATTGTTAGT+AGG | 0.453766 | 8.4:+29973680 | None:intergenic |
| CTTGCTTACTAAGCCCCTCC+TGG | 0.460120 | 8.4:+29973626 | None:intergenic |
| AGATGAACCTACAAATCATC+TGG | 0.461197 | 8.4:-29973464 | MS.gene012143:CDS |
| AATATAGCTTCTGGTGAAGA+AGG | 0.461252 | 8.4:-29974624 | MS.gene012143:CDS |
| TGATGTCCTTCTGGTTGAGC+AGG | 0.464580 | 8.4:-29974739 | MS.gene012143:CDS |
| GTTGATGTTGGCATTGATAT+GGG | 0.466393 | 8.4:-29973847 | MS.gene012143:CDS |
| AAATTTCCCTGGAACATTTG+AGG | 0.468288 | 8.4:-29973293 | MS.gene012143:CDS |
| TTGATTGGGCCGAATGGAAT+GGG | 0.471197 | 8.4:-29974819 | MS.gene012143:CDS |
| GTGCAAAACTTGGTAAATAT+GGG | 0.472556 | 8.4:-29973594 | MS.gene012143:CDS |
| GTTGACTTGCCCATTCCATT+CGG | 0.473068 | 8.4:+29974810 | None:intergenic |
| CAAAATCCTTTAGTGGCGGC+TGG | 0.473137 | 8.4:-29974443 | MS.gene012143:CDS |
| CTGGTTGAGCAGGAGGTAGT+TGG | 0.476330 | 8.4:-29974729 | MS.gene012143:CDS |
| CATCCTCCAGCCGCCACTAA+AGG | 0.476753 | 8.4:+29974437 | None:intergenic |
| TAGTAGGTCCACAAAGTGTT+GGG | 0.476791 | 8.4:+29973696 | None:intergenic |
| AGGCTCTCAGATGTTGATGT+TGG | 0.477753 | 8.4:-29973859 | MS.gene012143:CDS |
| TATCAGGAGGGCAGAAAGCT+CGG | 0.480167 | 8.4:-29973534 | MS.gene012143:CDS |
| CAAATATGGGTTGTTGAAGA+TGG | 0.482826 | 8.4:-29973325 | MS.gene012143:CDS |
| TCACTGTTGTAATTGGAAGT+CGG | 0.487149 | 8.4:-29974980 | MS.gene012143:CDS |
| CCCTCCTGATAGTTTGACAA+TGG | 0.490991 | 8.4:+29973546 | None:intergenic |
| ATCAGGAGGGCAGAAAGCTC+GGG | 0.492201 | 8.4:-29973533 | MS.gene012143:CDS |
| GGACTCGTGTTGCCATCGTT+GGG | 0.492382 | 8.4:-29973825 | MS.gene012143:CDS |
| TGATGCATTGGCTGATGCGC+TGG | 0.493126 | 8.4:-29973428 | MS.gene012143:CDS |
| AGTCGGGCTTCAGTGCTTGA+TGG | 0.496702 | 8.4:-29974963 | MS.gene012143:CDS |
| CCTCAAGTCAAGATGATTAG+TGG | 0.497140 | 8.4:+29974356 | None:intergenic |
| AGATGATACTAATGAGGAAG+AGG | 0.497593 | 8.4:-29974592 | MS.gene012143:CDS |
| TGTGGCTGAACAGGCAAAGA+AGG | 0.499430 | 8.4:-29975030 | MS.gene012143:CDS |
| ATCGTTGGGCCTAATGGTGC+TGG | 0.501366 | 8.4:-29973811 | MS.gene012143:CDS |
| CGTCCTACAAAATCCTTTAG+TGG | 0.502520 | 8.4:-29974450 | MS.gene012143:CDS |
| TTGAAACTTCATTTCTATCG+TGG | 0.502609 | 8.4:-29974219 | MS.gene012143:CDS |
| TTCGAAGAAGTCAGAAGTTG+AGG | 0.502896 | 8.4:-29973732 | MS.gene012143:CDS |
| TAGCAAAGATGTTTCTAAGA+AGG | 0.504069 | 8.4:-29975315 | MS.gene012143:CDS |
| CAAAAGCAAGAGCAAGGGTA+AGG | 0.506561 | 8.4:-29974028 | MS.gene012143:CDS |
| GAGGCTGTTCGTGCAAAACT+TGG | 0.509140 | 8.4:-29973604 | MS.gene012143:CDS |
| AGAAGTCAGAAGTTGAGGAT+AGG | 0.509662 | 8.4:-29973727 | MS.gene012143:CDS |
| TACTAATGAGGAAGAGGATG+CGG | 0.509848 | 8.4:-29974586 | MS.gene012143:CDS |
| CTTTGCCTGTTCAGCCACAT+GGG | 0.510208 | 8.4:+29975034 | None:intergenic |
| TTAGTAGGTCCACAAAGTGT+TGG | 0.510313 | 8.4:+29973695 | None:intergenic |
| TCGCTGCTGCGAACTTAGCT+CGG | 0.512299 | 8.4:+29974064 | None:intergenic |
| TTTGATTGGGCCGAATGGAA+TGG | 0.517459 | 8.4:-29974820 | MS.gene012143:CDS |
| TCTTGCTTGGAGGAAGATAC+CGG | 0.518263 | 8.4:-29974775 | MS.gene012143:CDS |
| TATGAACAATTACAACTGAT+GGG | 0.518809 | 8.4:-29974543 | MS.gene012143:CDS |
| GTATGAACAATTACAACTGA+TGG | 0.520659 | 8.4:-29974544 | MS.gene012143:CDS |
| GTTCAGTGGGTTCAGGAAAG+TGG | 0.522874 | 8.4:+29973944 | None:intergenic |
| GATGCGCTGGATGAATTCAC+TGG | 0.525230 | 8.4:-29973415 | MS.gene012143:CDS |
| TGTCCTTCTGGTTGAGCAGG+AGG | 0.526914 | 8.4:-29974736 | MS.gene012143:CDS |
| TAAGCCCCTCCTGGTCTGGA+TGG | 0.527473 | 8.4:+29973635 | None:intergenic |
| AGACGAAGAAGGTACTGAAC+AGG | 0.533085 | 8.4:+29973658 | None:intergenic |
| TTAGAAACATCTTTGCTACC+TGG | 0.537424 | 8.4:+29975320 | None:intergenic |
| AGCTTCTGGTGAAGAAGGCA+TGG | 0.539788 | 8.4:-29974619 | MS.gene012143:CDS |
| TGGAACATTTGAGGATTACA+AGG | 0.541220 | 8.4:-29973284 | MS.gene012143:CDS |
| TATGCAAAGTATTGATGCAT+TGG | 0.543005 | 8.4:-29973440 | MS.gene012143:CDS |
| GGCACTGTTAGAAATTTCCC+TGG | 0.544696 | 8.4:-29973304 | MS.gene012143:CDS |
| ACTAATGAGGAAGAGGATGC+GGG | 0.545085 | 8.4:-29974585 | MS.gene012143:CDS |
| AGTGGAGGTGTGAGTTCAGT+GGG | 0.547635 | 8.4:+29973931 | None:intergenic |
| GAACAAGGCTCAACAAGATA+AGG | 0.549422 | 8.4:-29974094 | MS.gene012143:CDS |
| AGCTAGAAGAACCGGGAACA+AGG | 0.549535 | 8.4:-29974109 | MS.gene012143:CDS |
| TGAAGAACGGAGTCAAATAT+GGG | 0.551908 | 8.4:-29973338 | MS.gene012143:CDS |
| ACTTCAGTGAAGATATCTCA+TGG | 0.554865 | 8.4:-29974855 | MS.gene012143:CDS |
| CGTCTCCATCCAGACCAGGA+GGG | 0.561023 | 8.4:-29973640 | MS.gene012143:CDS |
| TGAGTCTGAAGAGGAGCAAG+AGG | 0.562122 | 8.4:-29975144 | MS.gene012143:CDS |
| TATGGTTTGATTGGGCCGAA+TGG | 0.562765 | 8.4:-29974825 | MS.gene012143:CDS |
| GTCTCCATCCAGACCAGGAG+GGG | 0.564083 | 8.4:-29973639 | MS.gene012143:CDS |
| AATGAAGTTTCAAATCATGC+AGG | 0.564833 | 8.4:+29974229 | None:intergenic |
| ACATCAATATTCTTAGGTAC+CGG | 0.565113 | 8.4:+29974756 | None:intergenic |
| TTCATCCATACCTGCCAACA+TGG | 0.566109 | 8.4:+29975274 | None:intergenic |
| CTTTGTGGACCTACTAACAA+TGG | 0.566897 | 8.4:-29973689 | MS.gene012143:CDS |
| TAGAAGAGTACTTGTGTCGT+TGG | 0.567745 | 8.4:-29974320 | MS.gene012143:CDS |
| TCTTCGTCTCCATCCAGACC+AGG | 0.570272 | 8.4:-29973644 | MS.gene012143:CDS |
| ACTTCAATAAGCTGCAGAAG+TGG | 0.570862 | 8.4:+29973913 | None:intergenic |
| AGCTAAGTTCGCAGCAGCGA+AGG | 0.573676 | 8.4:-29974061 | MS.gene012143:CDS |
| CCACTAATCATCTTGACTTG+AGG | 0.575501 | 8.4:-29974356 | MS.gene012143:CDS |
| TTGACTTGAGGGCTGTTCTG+TGG | 0.576261 | 8.4:-29974344 | MS.gene012143:CDS |
| GGGGTAAGATGGTTATGACT+AGG | 0.577561 | 8.4:+29973568 | None:intergenic |
| GAAAAGCAAAAGCAAGAGCA+AGG | 0.587820 | 8.4:-29974034 | MS.gene012143:CDS |
| ACACTGCTGAATCTTCTAGC+TGG | 0.589769 | 8.4:-29973781 | MS.gene012143:CDS |
| GGATGCAGGTCCATCTTCAA+AGG | 0.590519 | 8.4:-29975348 | MS.gene012143:CDS |
| TTCAGACTCATCATCATCAG+AGG | 0.591473 | 8.4:+29975157 | None:intergenic |
| TGATGATGATGAGTCTGAAG+AGG | 0.592511 | 8.4:-29975153 | MS.gene012143:CDS |
| TAGAGGTACCACACAAGTGG+AGG | 0.593380 | 8.4:-29973984 | MS.gene012143:CDS |
| AAGTGGAGGTGTGAGTTCAG+TGG | 0.595199 | 8.4:+29973930 | None:intergenic |
| GCCAGATTTGAAGCCACTTG+AGG | 0.595553 | 8.4:-29975111 | MS.gene012143:CDS |
| CTTGTGTGGTACCTCTACTT+GGG | 0.597963 | 8.4:+29973990 | None:intergenic |
| CCATCTTCAAAGGCTAAACC+AGG | 0.598127 | 8.4:-29975338 | MS.gene012143:CDS |
| CTCAAGTCAAGATGATTAGT+GGG | 0.599587 | 8.4:+29974357 | None:intergenic |
| GGATAAAGATGATACTAATG+AGG | 0.600793 | 8.4:-29974598 | MS.gene012143:CDS |
| CTGAGAGCCTAAAATCCTCT+CGG | 0.603865 | 8.4:+29973872 | None:intergenic |
| TTGATGTTGGCATTGATATG+GGG | 0.604870 | 8.4:-29973846 | MS.gene012143:CDS |
| GTGTCGTTGGAAGAAAACTT+TGG | 0.605012 | 8.4:-29974307 | MS.gene012143:CDS |
| CTGTAGTCCCTCCACTTGTG+TGG | 0.605482 | 8.4:+29973976 | None:intergenic |
| AAGTAGAGGTACCACACAAG+TGG | 0.606298 | 8.4:-29973987 | MS.gene012143:CDS |
| TCATCGAGCAATAATAGAGT+GGG | 0.608704 | 8.4:+29974381 | None:intergenic |
| TCGTTGGAAGAAAACTTTGG+TGG | 0.608839 | 8.4:-29974304 | MS.gene012143:CDS |
| TCAATAAGCTGCAGAAGTGG+AGG | 0.610264 | 8.4:+29973916 | None:intergenic |
| GGTGATTTGGTTCCAAGTGA+AGG | 0.610276 | 8.4:-29973760 | MS.gene012143:CDS |
| GAGCAAGGGTAAGGTTGATG+AGG | 0.613167 | 8.4:-29974019 | MS.gene012143:CDS |
| AGGAGCAAGAGGAAAAGCAT+AGG | 0.613429 | 8.4:-29975133 | MS.gene012143:CDS |
| TCAGACTCATCATCATCAGA+GGG | 0.613503 | 8.4:+29975158 | None:intergenic |
| TGTAATCCTCAAATGTTCCA+GGG | 0.613886 | 8.4:+29973287 | None:intergenic |
| TTCATCGAGCAATAATAGAG+TGG | 0.615022 | 8.4:+29974380 | None:intergenic |
| GGAGGGGCTTAGTAAGCAAG+AGG | 0.616783 | 8.4:-29973623 | MS.gene012143:CDS |
| CCCATTGTCAAACTATCAGG+AGG | 0.619312 | 8.4:-29973547 | MS.gene012143:CDS |
| TCAGCAATAGACACCTCAAG+TGG | 0.621486 | 8.4:+29975098 | None:intergenic |
| CTCCTGATAGTTTGACAATG+GGG | 0.626825 | 8.4:+29973548 | None:intergenic |
| CTACCTCCTGCTCAACCAGA+AGG | 0.630434 | 8.4:+29974733 | None:intergenic |
| AATCCTTTAGTGGCGGCTGG+AGG | 0.632477 | 8.4:-29974440 | MS.gene012143:CDS |
| TGAAAGCAGCTAGAAGAACC+GGG | 0.637063 | 8.4:-29974116 | MS.gene012143:CDS |
| GGTCTGGATGGAGACGAAGA+AGG | 0.643717 | 8.4:+29973647 | None:intergenic |
| GGCTCAACAAGATAAGGTGA+AGG | 0.644665 | 8.4:-29974088 | MS.gene012143:CDS |
| TCGTCTCCATCCAGACCAGG+AGG | 0.645629 | 8.4:-29973641 | MS.gene012143:CDS |
| TAAAATGTGAGGTCTTGACA+TGG | 0.645742 | 8.4:+29973492 | None:intergenic |
| TCATCTAACAATAAAATGTG+AGG | 0.647891 | 8.4:+29973481 | None:intergenic |
| TCCTGATAGTTTGACAATGG+GGG | 0.650226 | 8.4:+29973549 | None:intergenic |
| TGAGGATGAGACCCAAGTAG+AGG | 0.652669 | 8.4:-29974001 | MS.gene012143:CDS |
| AGAGGTACCACACAAGTGGA+GGG | 0.653345 | 8.4:-29973983 | MS.gene012143:CDS |
| GACTCATCATCATCAGAGGG+AGG | 0.655723 | 8.4:+29975161 | None:intergenic |
| AGGAGGGCAGAAAGCTCGGG+TGG | 0.658600 | 8.4:-29973530 | MS.gene012143:CDS |
| CCTACAAAATCCTTTAGTGG+CGG | 0.660892 | 8.4:-29974447 | MS.gene012143:CDS |
| AAAAGCAAAAGCAAGAGCAA+GGG | 0.661346 | 8.4:-29974033 | MS.gene012143:CDS |
| ATGAACAATTACAACTGATG+GGG | 0.661536 | 8.4:-29974542 | MS.gene012143:CDS |
| AGCACCATTAGGCCCAACGA+TGG | 0.661552 | 8.4:+29973813 | None:intergenic |
| AGTGTATGCAGAAGCTTTCG+GGG | 0.663149 | 8.4:+29975199 | None:intergenic |
| GCGCTGGATGAATTCACTGG+TGG | 0.669802 | 8.4:-29973412 | MS.gene012143:CDS |
| CCATTGTCAAACTATCAGGA+GGG | 0.684004 | 8.4:-29973546 | MS.gene012143:CDS |
| GTGTCTGTGATGATGAAGAA+CGG | 0.698431 | 8.4:-29973351 | MS.gene012143:CDS |
| CAAGTGGAGGGACTACAGCG+TGG | 0.701926 | 8.4:-29973971 | MS.gene012143:CDS |
| TCAGTGCTTGATGGAGACGA+TGG | 0.702484 | 8.4:-29974954 | MS.gene012143:CDS |
| CTTCAGTTACCCAAACCGAG+AGG | 0.710739 | 8.4:-29973887 | MS.gene012143:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TATGAACAATTACAACTGAT+GGG | - | chr8.4:29974068-29974087 | MS.gene012143:CDS | 25.0% |
| ! | TCATCTAACAATAAAATGTG+AGG | + | chr8.4:29975133-29975152 | None:intergenic | 25.0% |
| !! | AACGATAGAAAATTTTTCTG+TGG | - | chr8.4:29973704-29973723 | MS.gene012143:CDS | 25.0% |
| AAAAGCTGATAAGCCTAAAA+AGG | - | chr8.4:29973359-29973378 | MS.gene012143:CDS | 30.0% | |
| AATGAAGTTTCAAATCATGC+AGG | + | chr8.4:29974385-29974404 | None:intergenic | 30.0% | |
| ACATCAATATTCTTAGGTAC+CGG | + | chr8.4:29973858-29973877 | None:intergenic | 30.0% | |
| AGAAGGACATCAATATTCTT+AGG | + | chr8.4:29973864-29973883 | None:intergenic | 30.0% | |
| ATATCTCATGGAAAACGTTA+TGG | - | chr8.4:29973768-29973787 | MS.gene012143:CDS | 30.0% | |
| ATGAACAATTACAACTGATG+GGG | - | chr8.4:29974069-29974088 | MS.gene012143:CDS | 30.0% | |
| GAAAACGTTATGGTTTGATT+GGG | - | chr8.4:29973778-29973797 | MS.gene012143:CDS | 30.0% | |
| GATCTACAAAATATAGCTTC+TGG | - | chr8.4:29973978-29973997 | MS.gene012143:CDS | 30.0% | |
| GGATAAAGATGATACTAATG+AGG | - | chr8.4:29974013-29974032 | MS.gene012143:CDS | 30.0% | |
| GTATGAACAATTACAACTGA+TGG | - | chr8.4:29974067-29974086 | MS.gene012143:CDS | 30.0% | |
| GTGCAAAACTTGGTAAATAT+GGG | - | chr8.4:29975017-29975036 | MS.gene012143:CDS | 30.0% | |
| TAAGAATATTGATGTCCTTC+TGG | - | chr8.4:29973863-29973882 | MS.gene012143:CDS | 30.0% | |
| TTGAAACTTCATTTCTATCG+TGG | - | chr8.4:29974392-29974411 | MS.gene012143:CDS | 30.0% | |
| ! | TAGCAAAGATGTTTCTAAGA+AGG | - | chr8.4:29973296-29973315 | MS.gene012143:CDS | 30.0% |
| ! | TTATTCGAAGATGCCTTTTT+AGG | + | chr8.4:29973375-29973394 | None:intergenic | 30.0% |
| !! | AATTTTGATGCTTTTGAGAG+TGG | - | chr8.4:29974416-29974435 | MS.gene012143:CDS | 30.0% |
| !! | ATTTTGATGCTTTTGAGAGT+GGG | - | chr8.4:29974417-29974436 | MS.gene012143:CDS | 30.0% |
| !! | TAAAAAGGCATCTTCGAATA+AGG | - | chr8.4:29973374-29973393 | MS.gene012143:CDS | 30.0% |
| !! | TATGCAAAGTATTGATGCAT+TGG | - | chr8.4:29975171-29975190 | MS.gene012143:CDS | 30.0% |
| AAAAGCAAAAGCAAGAGCAA+GGG | - | chr8.4:29974578-29974597 | MS.gene012143:CDS | 35.0% | |
| AAATTTCCCTGGAACATTTG+AGG | - | chr8.4:29975318-29975337 | MS.gene012143:CDS | 35.0% | |
| AATATAGCTTCTGGTGAAGA+AGG | - | chr8.4:29973987-29974006 | MS.gene012143:CDS | 35.0% | |
| ACTTCAGTGAAGATATCTCA+TGG | - | chr8.4:29973756-29973775 | MS.gene012143:CDS | 35.0% | |
| AGATGAACCTACAAATCATC+TGG | - | chr8.4:29975147-29975166 | MS.gene012143:CDS | 35.0% | |
| AGATGATACTAATGAGGAAG+AGG | - | chr8.4:29974019-29974038 | MS.gene012143:CDS | 35.0% | |
| ATGAAGAACGGAGTCAAATA+TGG | - | chr8.4:29975272-29975291 | MS.gene012143:CDS | 35.0% | |
| CGTGCAAAACTTGGTAAATA+TGG | - | chr8.4:29975016-29975035 | MS.gene012143:CDS | 35.0% | |
| CTCAAGTCAAGATGATTAGT+GGG | + | chr8.4:29974257-29974276 | None:intergenic | 35.0% | |
| GATGCTTTCACTGTTGTAAT+TGG | - | chr8.4:29973624-29973643 | MS.gene012143:CDS | 35.0% | |
| GGAAAACGTTATGGTTTGAT+TGG | - | chr8.4:29973777-29973796 | MS.gene012143:CDS | 35.0% | |
| GTGTTTCATCCATTGTTAGT+AGG | + | chr8.4:29974934-29974953 | None:intergenic | 35.0% | |
| TAAAATGTGAGGTCTTGACA+TGG | + | chr8.4:29975122-29975141 | None:intergenic | 35.0% | |
| TCACTGTTGTAATTGGAAGT+CGG | - | chr8.4:29973631-29973650 | MS.gene012143:CDS | 35.0% | |
| TCATCGAGCAATAATAGAGT+GGG | + | chr8.4:29974233-29974252 | None:intergenic | 35.0% | |
| TGAAGAACGGAGTCAAATAT+GGG | - | chr8.4:29975273-29975292 | MS.gene012143:CDS | 35.0% | |
| TGGAACATTTGAGGATTACA+AGG | - | chr8.4:29975327-29975346 | MS.gene012143:CDS | 35.0% | |
| TGTAATCCTCAAATGTTCCA+GGG | + | chr8.4:29975327-29975346 | None:intergenic | 35.0% | |
| TTAGAAACATCTTTGCTACC+TGG | + | chr8.4:29973294-29973313 | None:intergenic | 35.0% | |
| TTCATCGAGCAATAATAGAG+TGG | + | chr8.4:29974234-29974253 | None:intergenic | 35.0% | |
| TTGTAATCCTCAAATGTTCC+AGG | + | chr8.4:29975328-29975347 | None:intergenic | 35.0% | |
| ! | AAAATTTTTCTGTGGCTGCT+CGG | - | chr8.4:29973712-29973731 | MS.gene012143:CDS | 35.0% |
| ! | CAAATATGGGTTGTTGAAGA+TGG | - | chr8.4:29975286-29975305 | MS.gene012143:CDS | 35.0% |
| ! | CACTAAAGGATTTTGTAGGA+CGG | + | chr8.4:29974163-29974182 | None:intergenic | 35.0% |
| ! | CACTAATCATCTTGACTTGA+GGG | - | chr8.4:29974256-29974275 | MS.gene012143:CDS | 35.0% |
| ! | TGCATATCCAGATGATTTGT+AGG | + | chr8.4:29975157-29975176 | None:intergenic | 35.0% |
| !! | GTTGATGTTGGCATTGATAT+GGG | - | chr8.4:29974764-29974783 | MS.gene012143:CDS | 35.0% |
| !! | TGTTGATGTTGGCATTGATA+TGG | - | chr8.4:29974763-29974782 | MS.gene012143:CDS | 35.0% |
| !! | TTGATGTTGGCATTGATATG+GGG | - | chr8.4:29974765-29974784 | MS.gene012143:CDS | 35.0% |
| !!! | TCAAAGATTTTAGCTGGTCT+GGG | - | chr8.4:29974116-29974135 | MS.gene012143:CDS | 35.0% |
| AAGAAAAAGTCAGAGGATGC+AGG | - | chr8.4:29973249-29973268 | MS.gene012143:CDS | 40.0% | |
| ACTTCAATAAGCTGCAGAAG+TGG | + | chr8.4:29974701-29974720 | None:intergenic | 40.0% | |
| AGAAGTCAGAAGTTGAGGAT+AGG | - | chr8.4:29974884-29974903 | MS.gene012143:CDS | 40.0% | |
| CACTGTTGTAATTGGAAGTC+GGG | - | chr8.4:29973632-29973651 | MS.gene012143:CDS | 40.0% | |
| CCATTGTCAAACTATCAGGA+GGG | - | chr8.4:29975065-29975084 | MS.gene012143:CDS | 40.0% | |
| CCTACAAAATCCTTTAGTGG+CGG | - | chr8.4:29974164-29974183 | MS.gene012143:CDS | 40.0% | |
| CCTCAAGTCAAGATGATTAG+TGG | + | chr8.4:29974258-29974277 | None:intergenic | 40.0% | |
| CCTCCTGATAGTTTGACAAT+GGG | + | chr8.4:29975067-29975086 | None:intergenic | 40.0% | |
| CGTCCTACAAAATCCTTTAG+TGG | - | chr8.4:29974161-29974180 | MS.gene012143:CDS | 40.0% | |
| CTCCTGATAGTTTGACAATG+GGG | + | chr8.4:29975066-29975085 | None:intergenic | 40.0% | |
| CTTTGTGGACCTACTAACAA+TGG | - | chr8.4:29974922-29974941 | MS.gene012143:CDS | 40.0% | |
| GAAAAGCAAAAGCAAGAGCA+AGG | - | chr8.4:29974577-29974596 | MS.gene012143:CDS | 40.0% | |
| GAACAAGGCTCAACAAGATA+AGG | - | chr8.4:29974517-29974536 | MS.gene012143:CDS | 40.0% | |
| GAAGTCAGAAGTTGAGGATA+GGG | - | chr8.4:29974885-29974904 | MS.gene012143:CDS | 40.0% | |
| GAGATATTCCCAACACTTTG+TGG | - | chr8.4:29974907-29974926 | MS.gene012143:CDS | 40.0% | |
| TACTAATGAGGAAGAGGATG+CGG | - | chr8.4:29974025-29974044 | MS.gene012143:CDS | 40.0% | |
| TCAGACTCATCATCATCAGA+GGG | + | chr8.4:29973456-29973475 | None:intergenic | 40.0% | |
| TCAGTGTATGCAGAAGCTTT+CGG | + | chr8.4:29973417-29973436 | None:intergenic | 40.0% | |
| TCCTGATAGTTTGACAATGG+GGG | + | chr8.4:29975065-29975084 | None:intergenic | 40.0% | |
| TCGTTGGAAGAAAACTTTGG+TGG | - | chr8.4:29974307-29974326 | MS.gene012143:CDS | 40.0% | |
| TTAGTAGGTCCACAAAGTGT+TGG | + | chr8.4:29974919-29974938 | None:intergenic | 40.0% | |
| TTCAGACTCATCATCATCAG+AGG | + | chr8.4:29973457-29973476 | None:intergenic | 40.0% | |
| TTCGAAGAAGTCAGAAGTTG+AGG | - | chr8.4:29974879-29974898 | MS.gene012143:CDS | 40.0% | |
| TTGAAAGCAGCTAGAAGAAC+CGG | - | chr8.4:29974494-29974513 | MS.gene012143:CDS | 40.0% | |
| ! | AAATTTTTCTGTGGCTGCTC+GGG | - | chr8.4:29973713-29973732 | MS.gene012143:CDS | 40.0% |
| ! | CCACTAATCATCTTGACTTG+AGG | - | chr8.4:29974255-29974274 | MS.gene012143:CDS | 40.0% |
| ! | GAATCTTCTAGCTGGTGATT+TGG | - | chr8.4:29974838-29974857 | MS.gene012143:CDS | 40.0% |
| ! | GGTTTTACAAAGGACATGCA+GGG | - | chr8.4:29974137-29974156 | MS.gene012143:CDS | 40.0% |
| ! | GTAGATTTTCCAGCACCATT+AGG | + | chr8.4:29974812-29974831 | None:intergenic | 40.0% |
| ! | GTGTCGTTGGAAGAAAACTT+TGG | - | chr8.4:29974304-29974323 | MS.gene012143:CDS | 40.0% |
| ! | GTGTCTGTGATGATGAAGAA+CGG | - | chr8.4:29975260-29975279 | MS.gene012143:CDS | 40.0% |
| ! | TAGTAGGTCCACAAAGTGTT+GGG | + | chr8.4:29974918-29974937 | None:intergenic | 40.0% |
| ! | TGATGATGATGAGTCTGAAG+AGG | - | chr8.4:29973458-29973477 | MS.gene012143:CDS | 40.0% |
| !! | CAAGCGTCAAAGATTTTAGC+TGG | - | chr8.4:29974110-29974129 | MS.gene012143:CDS | 40.0% |
| !! | TAGAAGAGTACTTGTGTCGT+TGG | - | chr8.4:29974291-29974310 | MS.gene012143:CDS | 40.0% |
| !!! | AGATATTTTAGCTGCCCATG+TGG | - | chr8.4:29973563-29973582 | MS.gene012143:CDS | 40.0% |
| !!! | CACTTTTGAAGCTTCTTGCT+TGG | - | chr8.4:29973823-29973842 | MS.gene012143:CDS | 40.0% |
| !!! | GTCAAAGATTTTAGCTGGTC+TGG | - | chr8.4:29974115-29974134 | MS.gene012143:CDS | 40.0% |
| !!! | TTTTGAAGCTTCTTGCTTGG+AGG | - | chr8.4:29973826-29973845 | MS.gene012143:CDS | 40.0% |
| ACACTGCTGAATCTTCTAGC+TGG | - | chr8.4:29974830-29974849 | MS.gene012143:CDS | 45.0% | |
| ACCCCCATTGTCAAACTATC+AGG | - | chr8.4:29975061-29975080 | MS.gene012143:CDS | 45.0% | |
| ACCTCAAGTGGCTTCAAATC+TGG | + | chr8.4:29973504-29973523 | None:intergenic | 45.0% | |
| ACTAATGAGGAAGAGGATGC+GGG | - | chr8.4:29974026-29974045 | MS.gene012143:CDS | 45.0% | |
| ACTTGTGTGGTACCTCTACT+TGG | + | chr8.4:29974625-29974644 | None:intergenic | 45.0% | |
| AGCCTAAAATCCTCTCGGTT+TGG | + | chr8.4:29974737-29974756 | None:intergenic | 45.0% | |
| AGGCAAAGAAGGAAGCTCTT+AGG | - | chr8.4:29973592-29973611 | MS.gene012143:CDS | 45.0% | |
| AGGCTCTCAGATGTTGATGT+TGG | - | chr8.4:29974752-29974771 | MS.gene012143:CDS | 45.0% | |
| AGTGTATGCAGAAGCTTTCG+GGG | + | chr8.4:29973415-29973434 | None:intergenic | 45.0% | |
| CAAAAGCAAGAGCAAGGGTA+AGG | - | chr8.4:29974583-29974602 | MS.gene012143:CDS | 45.0% | |
| CAGTGTATGCAGAAGCTTTC+GGG | + | chr8.4:29973416-29973435 | None:intergenic | 45.0% | |
| CCATCTTCAAAGGCTAAACC+AGG | - | chr8.4:29973273-29973292 | MS.gene012143:CDS | 45.0% | |
| CCCATTGTCAAACTATCAGG+AGG | - | chr8.4:29975064-29975083 | MS.gene012143:CDS | 45.0% | |
| CCCTCCTGATAGTTTGACAA+TGG | + | chr8.4:29975068-29975087 | None:intergenic | 45.0% | |
| CTGAGAGCCTAAAATCCTCT+CGG | + | chr8.4:29974742-29974761 | None:intergenic | 45.0% | |
| CTTCGAACTTCACCTTCACT+TGG | + | chr8.4:29974866-29974885 | None:intergenic | 45.0% | |
| CTTGTGTGGTACCTCTACTT+GGG | + | chr8.4:29974624-29974643 | None:intergenic | 45.0% | |
| GCCTAAAATCCTCTCGGTTT+GGG | + | chr8.4:29974736-29974755 | None:intergenic | 45.0% | |
| GGCAAAGAAGGAAGCTCTTA+GGG | - | chr8.4:29973593-29973612 | MS.gene012143:CDS | 45.0% | |
| GGCACTGTTAGAAATTTCCC+TGG | - | chr8.4:29975307-29975326 | MS.gene012143:CDS | 45.0% | |
| GGCTCAACAAGATAAGGTGA+AGG | - | chr8.4:29974523-29974542 | MS.gene012143:CDS | 45.0% | |
| GGGGTAAGATGGTTATGACT+AGG | + | chr8.4:29975046-29975065 | None:intergenic | 45.0% | |
| GTTTGACAATGGGGGTAAGA+TGG | + | chr8.4:29975057-29975076 | None:intergenic | 45.0% | |
| TATGGTTTGATTGGGCCGAA+TGG | - | chr8.4:29973786-29973805 | MS.gene012143:CDS | 45.0% | |
| TCAATAAGCTGCAGAAGTGG+AGG | + | chr8.4:29974698-29974717 | None:intergenic | 45.0% | |
| TCAGCAATAGACACCTCAAG+TGG | + | chr8.4:29973516-29973535 | None:intergenic | 45.0% | |
| TCTTGCTTGGAGGAAGATAC+CGG | - | chr8.4:29973836-29973855 | MS.gene012143:CDS | 45.0% | |
| TGAAAGCAGCTAGAAGAACC+GGG | - | chr8.4:29974495-29974514 | MS.gene012143:CDS | 45.0% | |
| TTCATCCATACCTGCCAACA+TGG | + | chr8.4:29973340-29973359 | None:intergenic | 45.0% | |
| TTGATTGGGCCGAATGGAAT+GGG | - | chr8.4:29973792-29973811 | MS.gene012143:CDS | 45.0% | |
| TTTGATTGGGCCGAATGGAA+TGG | - | chr8.4:29973791-29973810 | MS.gene012143:CDS | 45.0% | |
| ! | AATTTTTCTGTGGCTGCTCG+GGG | - | chr8.4:29973714-29973733 | MS.gene012143:CDS | 45.0% |
| ! | ACCCAAACCGAGAGGATTTT+AGG | - | chr8.4:29974732-29974751 | MS.gene012143:CDS | 45.0% |
| ! | AGGAGCAAGAGGAAAAGCAT+AGG | - | chr8.4:29973478-29973497 | MS.gene012143:CDS | 45.0% |
| ! | CCGCCACTAAAGGATTTTGT+AGG | + | chr8.4:29974167-29974186 | None:intergenic | 45.0% |
| ! | CCTGGTTTAGCCTTTGAAGA+TGG | + | chr8.4:29973276-29973295 | None:intergenic | 45.0% |
| ! | GGGTTTTACAAAGGACATGC+AGG | - | chr8.4:29974136-29974155 | MS.gene012143:CDS | 45.0% |
| ! | GTTTTCTGTCTCTGCCATGT+TGG | - | chr8.4:29973323-29973342 | MS.gene012143:CDS | 45.0% |
| !! | AAGTAGAGGTACCACACAAG+TGG | - | chr8.4:29974624-29974643 | MS.gene012143:CDS | 45.0% |
| !! | AGACGAAGAAGGTACTGAAC+AGG | + | chr8.4:29974956-29974975 | None:intergenic | 45.0% |
| !! | AGCTGGTCTGGGTTTTACAA+AGG | - | chr8.4:29974127-29974146 | MS.gene012143:CDS | 45.0% |
| !! | ATCTTGTTGAGCCTTGTTCC+CGG | + | chr8.4:29974516-29974535 | None:intergenic | 45.0% |
| !! | GGTGATTTGGTTCCAAGTGA+AGG | - | chr8.4:29974851-29974870 | MS.gene012143:CDS | 45.0% |
| !! | GTTGACTTGCCCATTCCATT+CGG | + | chr8.4:29973804-29973823 | None:intergenic | 45.0% |
| AGCTAGAAGAACCGGGAACA+AGG | - | chr8.4:29974502-29974521 | MS.gene012143:CDS | 50.0% | |
| AGCTTCTGGTGAAGAAGGCA+TGG | - | chr8.4:29973992-29974011 | MS.gene012143:CDS | 50.0% | |
| CAAAATCCTTTAGTGGCGGC+TGG | - | chr8.4:29974168-29974187 | MS.gene012143:CDS | 50.0% | |
| CTTCAGTTACCCAAACCGAG+AGG | - | chr8.4:29974724-29974743 | MS.gene012143:CDS | 50.0% | |
| CTTTGCCTGTTCAGCCACAT+GGG | + | chr8.4:29973580-29973599 | None:intergenic | 50.0% | |
| GACTCATCATCATCAGAGGG+AGG | + | chr8.4:29973453-29973472 | None:intergenic | 50.0% | |
| GAGGCTGTTCGTGCAAAACT+TGG | - | chr8.4:29975007-29975026 | MS.gene012143:CDS | 50.0% | |
| GATGCGCTGGATGAATTCAC+TGG | - | chr8.4:29975196-29975215 | MS.gene012143:CDS | 50.0% | |
| GGATGCAGGTCCATCTTCAA+AGG | - | chr8.4:29973263-29973282 | MS.gene012143:CDS | 50.0% | |
| TATCAGGAGGGCAGAAAGCT+CGG | - | chr8.4:29975077-29975096 | MS.gene012143:CDS | 50.0% | |
| TCAGTGCTTGATGGAGACGA+TGG | - | chr8.4:29973657-29973676 | MS.gene012143:CDS | 50.0% | |
| TCTTTGCCTGTTCAGCCACA+TGG | + | chr8.4:29973581-29973600 | None:intergenic | 50.0% | |
| TGAGGATGAGACCCAAGTAG+AGG | - | chr8.4:29974610-29974629 | MS.gene012143:CDS | 50.0% | |
| TGAGTCTGAAGAGGAGCAAG+AGG | - | chr8.4:29973467-29973486 | MS.gene012143:CDS | 50.0% | |
| TGTGGCTGAACAGGCAAAGA+AGG | - | chr8.4:29973581-29973600 | MS.gene012143:CDS | 50.0% | |
| ! | AAGTGGAGGTGTGAGTTCAG+TGG | + | chr8.4:29974684-29974703 | None:intergenic | 50.0% |
| ! | AGTGGAGGTGTGAGTTCAGT+GGG | + | chr8.4:29974683-29974702 | None:intergenic | 50.0% |
| ! | GCCAGATTTGAAGCCACTTG+AGG | - | chr8.4:29973500-29973519 | MS.gene012143:CDS | 50.0% |
| ! | GTTCAGTGGGTTCAGGAAAG+TGG | + | chr8.4:29974670-29974689 | None:intergenic | 50.0% |
| ! | TGATGTCCTTCTGGTTGAGC+AGG | - | chr8.4:29973872-29973891 | MS.gene012143:CDS | 50.0% |
| ! | TTGACTTGAGGGCTGTTCTG+TGG | - | chr8.4:29974267-29974286 | MS.gene012143:CDS | 50.0% |
| !! | AGAGGTACCACACAAGTGGA+GGG | - | chr8.4:29974628-29974647 | MS.gene012143:CDS | 50.0% |
| !! | GAGCAAGGGTAAGGTTGATG+AGG | - | chr8.4:29974592-29974611 | MS.gene012143:CDS | 50.0% |
| !! | TAGAGGTACCACACAAGTGG+AGG | - | chr8.4:29974627-29974646 | MS.gene012143:CDS | 50.0% |
| AATCCTTTAGTGGCGGCTGG+AGG | - | chr8.4:29974171-29974190 | MS.gene012143:CDS | 55.0% | |
| AGCACCATTAGGCCCAACGA+TGG | + | chr8.4:29974801-29974820 | None:intergenic | 55.0% | |
| AGCTAAGTTCGCAGCAGCGA+AGG | - | chr8.4:29974550-29974569 | MS.gene012143:CDS | 55.0% | |
| AGTCGGGCTTCAGTGCTTGA+TGG | - | chr8.4:29973648-29973667 | MS.gene012143:CDS | 55.0% | |
| ATCAGGAGGGCAGAAAGCTC+GGG | - | chr8.4:29975078-29975097 | MS.gene012143:CDS | 55.0% | |
| ATCGTTGGGCCTAATGGTGC+TGG | - | chr8.4:29974800-29974819 | MS.gene012143:CDS | 55.0% | |
| CTACCTCCTGCTCAACCAGA+AGG | + | chr8.4:29973881-29973900 | None:intergenic | 55.0% | |
| CTCTGCCATGTTGGCAGGTA+TGG | - | chr8.4:29973332-29973351 | MS.gene012143:CDS | 55.0% | |
| CTGGTTGAGCAGGAGGTAGT+TGG | - | chr8.4:29973882-29973901 | MS.gene012143:CDS | 55.0% | |
| CTGTAGTCCCTCCACTTGTG+TGG | + | chr8.4:29974638-29974657 | None:intergenic | 55.0% | |
| CTTGCTTACTAAGCCCCTCC+TGG | + | chr8.4:29974988-29975007 | None:intergenic | 55.0% | |
| GCGCTGGATGAATTCACTGG+TGG | - | chr8.4:29975199-29975218 | MS.gene012143:CDS | 55.0% | |
| GGACTCGTGTTGCCATCGTT+GGG | - | chr8.4:29974786-29974805 | MS.gene012143:CDS | 55.0% | |
| GGAGGGGCTTAGTAAGCAAG+AGG | - | chr8.4:29974988-29975007 | MS.gene012143:CDS | 55.0% | |
| GGTCTGGATGGAGACGAAGA+AGG | + | chr8.4:29974967-29974986 | None:intergenic | 55.0% | |
| GTTGCCATCGTTGGGCCTAA+TGG | - | chr8.4:29974794-29974813 | MS.gene012143:CDS | 55.0% | |
| TATGCAGAAGCTTTCGGGGC+AGG | + | chr8.4:29973411-29973430 | None:intergenic | 55.0% | |
| TCGCTGCTGCGAACTTAGCT+CGG | + | chr8.4:29974550-29974569 | None:intergenic | 55.0% | |
| TCTGTCTCTGCCATGTTGGC+AGG | - | chr8.4:29973327-29973346 | MS.gene012143:CDS | 55.0% | |
| TCTTCGTCTCCATCCAGACC+AGG | - | chr8.4:29974967-29974986 | MS.gene012143:CDS | 55.0% | |
| TTACTAAGCCCCTCCTGGTC+TGG | + | chr8.4:29974983-29975002 | None:intergenic | 55.0% | |
| ! | GAAGCTTTCGGGGCAGGTTT+TGG | + | chr8.4:29973405-29973424 | None:intergenic | 55.0% |
| ! | GGTGTGAGTTCAGTGGGTTC+AGG | + | chr8.4:29974677-29974696 | None:intergenic | 55.0% |
| ! | TGTCCTTCTGGTTGAGCAGG+AGG | - | chr8.4:29973875-29973894 | MS.gene012143:CDS | 55.0% |
| !! | TGATGCATTGGCTGATGCGC+TGG | - | chr8.4:29975183-29975202 | MS.gene012143:CDS | 55.0% |
| AGCTGCCCATGTGGCTGAAC+AGG | - | chr8.4:29973572-29973591 | MS.gene012143:CDS | 60.0% | |
| CAAGTGGAGGGACTACAGCG+TGG | - | chr8.4:29974640-29974659 | MS.gene012143:CDS | 60.0% | |
| CATCCTCCAGCCGCCACTAA+AGG | + | chr8.4:29974177-29974196 | None:intergenic | 60.0% | |
| CGTCTCCATCCAGACCAGGA+GGG | - | chr8.4:29974971-29974990 | MS.gene012143:CDS | 60.0% | |
| GGGACTCGTGTTGCCATCGT+TGG | - | chr8.4:29974785-29974804 | MS.gene012143:CDS | 60.0% | |
| GTCTCCATCCAGACCAGGAG+GGG | - | chr8.4:29974972-29974991 | MS.gene012143:CDS | 60.0% | |
| TAAGCCCCTCCTGGTCTGGA+TGG | + | chr8.4:29974979-29974998 | None:intergenic | 60.0% | |
| TCGTCTCCATCCAGACCAGG+AGG | - | chr8.4:29974970-29974989 | MS.gene012143:CDS | 60.0% | |
| AGGAGGGCAGAAAGCTCGGG+TGG | - | chr8.4:29975081-29975100 | MS.gene012143:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 29973243 | 29975390 | 29973243 | ID=MS.gene012143 |
| chr8.4 | mRNA | 29973243 | 29975390 | 29973243 | ID=MS.gene012143.t1;Parent=MS.gene012143 |
| chr8.4 | exon | 29973243 | 29975390 | 29973243 | ID=MS.gene012143.t1.exon1;Parent=MS.gene012143.t1 |
| chr8.4 | CDS | 29973243 | 29975390 | 29973243 | ID=cds.MS.gene012143.t1;Parent=MS.gene012143.t1 |
| Gene Sequence |
| Protein sequence |
