Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31234.t1 | XP_013465355.1 | 99.6 | 558 | 2 | 0 | 38 | 595 | 33 | 590 | 0.00E+00 | 1114.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31234.t1 | Q9FJH6 | 84.7 | 557 | 85 | 0 | 39 | 595 | 39 | 595 | 4.0e-283 | 974.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31234.t1 | A0A072VMQ2 | 99.6 | 558 | 2 | 0 | 38 | 595 | 33 | 590 | 0.0e+00 | 1114.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene31234 | MS.gene70530 | PPI |
| MS.gene013379 | MS.gene31234 | PPI |
| MS.gene31234 | MS.gene044268 | PPI |
| MS.gene024403 | MS.gene31234 | PPI |
| MS.gene25771 | MS.gene31234 | PPI |
| MS.gene029857 | MS.gene31234 | PPI |
| MS.gene31234 | MS.gene28880 | PPI |
| MS.gene31234 | MS.gene44789 | PPI |
| MS.gene31234 | MS.gene44209 | PPI |
| MS.gene31234 | MS.gene30914 | PPI |
| MS.gene31234 | MS.gene073773 | PPI |
| MS.gene92023 | MS.gene31234 | PPI |
| MS.gene31234 | MS.gene012143 | PPI |
| MS.gene31234 | MS.gene22732 | PPI |
| MS.gene017600 | MS.gene31234 | PPI |
| MS.gene31234 | MS.gene24579 | PPI |
| MS.gene31234 | MS.gene06475 | PPI |
| MS.gene022057 | MS.gene31234 | PPI |
| MS.gene31234 | MS.gene69745 | PPI |
| MS.gene049356 | MS.gene31234 | PPI |
| MS.gene31234 | MS.gene025871 | PPI |
| MS.gene31234 | MS.gene31035 | PPI |
| MS.gene31234 | MS.gene050681 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31234.t1 | MTR_2g095440 | 98.319 | 595 | 5 | 1 | 1 | 595 | 1 | 590 | 0.0 | 1210 |
| MS.gene31234.t1 | MTR_2g095440 | 99.620 | 527 | 2 | 0 | 69 | 595 | 4 | 530 | 0.0 | 1095 |
| MS.gene31234.t1 | MTR_2g095440 | 99.620 | 526 | 2 | 0 | 70 | 595 | 11 | 536 | 0.0 | 1093 |
| MS.gene31234.t1 | MTR_4g057795 | 89.568 | 556 | 58 | 0 | 40 | 595 | 35 | 590 | 0.0 | 1058 |
| MS.gene31234.t1 | MTR_4g057795 | 89.562 | 479 | 50 | 0 | 117 | 595 | 2 | 480 | 0.0 | 914 |
| MS.gene31234.t1 | MTR_3g080970 | 42.486 | 539 | 285 | 6 | 67 | 584 | 173 | 707 | 2.02e-152 | 455 |
| MS.gene31234.t1 | MTR_7g018380 | 40.541 | 555 | 289 | 6 | 67 | 584 | 152 | 702 | 4.07e-147 | 442 |
| MS.gene31234.t1 | MTR_8g075040 | 41.591 | 553 | 284 | 7 | 67 | 584 | 205 | 753 | 3.19e-145 | 438 |
| MS.gene31234.t1 | MTR_1g066620 | 42.000 | 550 | 280 | 10 | 71 | 584 | 2 | 548 | 2.36e-144 | 429 |
| MS.gene31234.t1 | MTR_3g095010 | 30.654 | 535 | 347 | 8 | 65 | 579 | 102 | 632 | 3.81e-70 | 240 |
| MS.gene31234.t1 | MTR_3g095010 | 26.316 | 247 | 149 | 4 | 69 | 311 | 433 | 650 | 2.21e-19 | 92.8 |
| MS.gene31234.t1 | MTR_4g109720 | 26.122 | 245 | 128 | 9 | 384 | 593 | 391 | 617 | 5.56e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31234.t1 | AT5G60790 | 84.588 | 558 | 86 | 0 | 38 | 595 | 38 | 595 | 0.0 | 1013 |
| MS.gene31234.t1 | AT3G54540 | 43.494 | 561 | 271 | 10 | 67 | 588 | 161 | 714 | 8.99e-156 | 464 |
| MS.gene31234.t1 | AT3G54540 | 43.494 | 561 | 271 | 10 | 67 | 588 | 161 | 714 | 8.99e-156 | 464 |
| MS.gene31234.t1 | AT1G64550 | 43.519 | 540 | 279 | 6 | 67 | 584 | 173 | 708 | 2.08e-154 | 461 |
| MS.gene31234.t1 | AT5G64840 | 30.420 | 572 | 373 | 8 | 30 | 579 | 56 | 624 | 5.56e-74 | 250 |
| MS.gene31234.t1 | AT5G64840 | 27.350 | 234 | 139 | 5 | 69 | 299 | 425 | 630 | 1.66e-17 | 86.7 |
| MS.gene31234.t1 | AT5G09930 | 30.380 | 553 | 358 | 9 | 51 | 583 | 69 | 614 | 1.42e-71 | 243 |
| MS.gene31234.t1 | AT5G09930 | 24.066 | 241 | 138 | 4 | 69 | 299 | 411 | 616 | 2.49e-15 | 79.7 |
Find 153 sgRNAs with CRISPR-Local
Find 298 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTCCCAAGATTTCCTTAA+TGG | 0.133001 | 2.4:+7180987 | MS.gene31234:CDS |
| GAAGAAATTTGACCGTATTT+TGG | 0.193189 | 2.4:+7180953 | MS.gene31234:CDS |
| ATCCTTTCTTCCTCATTTCC+AGG | 0.254068 | 2.4:-7181599 | None:intergenic |
| CGCCACCGCTTCATCGAAAA+AGG | 0.264820 | 2.4:+7178130 | MS.gene31234:CDS |
| TCTGAGTTGGAGCTAAATTA+TGG | 0.275758 | 2.4:+7179556 | MS.gene31234:CDS |
| TCCTCTCTCTAGGGATATTC+AGG | 0.283104 | 2.4:+7178241 | MS.gene31234:CDS |
| AGAGCAGCTATTGGGAAGTT+TGG | 0.294434 | 2.4:+7181623 | MS.gene31234:CDS |
| GGAGAAAGAAGCTGAAATTC+TGG | 0.295585 | 2.4:+7179869 | MS.gene31234:CDS |
| CCCACCTGTTCTCCAGTTTG+TGG | 0.300584 | 2.4:+7181316 | MS.gene31234:CDS |
| TGACGAGGAAAGGTTGAAAT+TGG | 0.301469 | 2.4:+7179848 | MS.gene31234:CDS |
| AAGGAATACATTGCACGATT+TGG | 0.328195 | 2.4:+7181155 | MS.gene31234:CDS |
| GATAGTGTTGCTAACGGAAT+TGG | 0.333903 | 2.4:+7178170 | MS.gene31234:CDS |
| ATCAGGTGGCCCATGAGATA+TGG | 0.335843 | 2.4:+7181864 | MS.gene31234:CDS |
| GGTGATTTGGTTCCTTTAGA+TGG | 0.339333 | 2.4:+7181470 | MS.gene31234:CDS |
| GAAGCTTATGACAGGTGATT+TGG | 0.339539 | 2.4:+7181457 | MS.gene31234:CDS |
| TTCTTGTAGATGAGATTATC+AGG | 0.347827 | 2.4:-7181359 | None:intergenic |
| CAGATGGGAAGGTGATATTA+TGG | 0.351979 | 2.4:+7181910 | MS.gene31234:CDS |
| TATTTGTGCAGACACCATTA+AGG | 0.358821 | 2.4:-7181001 | None:intergenic |
| CAGTTTGTGGAGGTGACATT+TGG | 0.361508 | 2.4:+7181329 | MS.gene31234:CDS |
| GAATGGTTGGGTTCATAAAC+AGG | 0.363149 | 2.4:-7180173 | None:intergenic |
| CGTGCTCTTCCCAGCTCCAT+TGG | 0.366938 | 2.4:-7181429 | None:intergenic |
| TGTTCAGACACGTGCTGAAC+TGG | 0.372673 | 2.4:+7181079 | MS.gene31234:CDS |
| GGGATACCAAGGTGATTTGT+AGG | 0.378062 | 2.4:-7180210 | None:intergenic |
| ATGGGATGGTGGCATGGTTC+TGG | 0.379571 | 2.4:+7181817 | MS.gene31234:CDS |
| CTCTGACATGTCTGCGTTGG+AGG | 0.384118 | 2.4:+7179812 | MS.gene31234:CDS |
| GTGCAATGCGAAGGTGATTA+TGG | 0.388699 | 2.4:-7181505 | None:intergenic |
| TTTGTTCCCATCCTCTCTCT+AGG | 0.391658 | 2.4:+7178231 | MS.gene31234:CDS |
| CCATCCGATAAATTTCTCAT+AGG | 0.393413 | 2.4:-7181671 | None:intergenic |
| ATAGTGTTGCTAACGGAATT+GGG | 0.394864 | 2.4:+7178171 | MS.gene31234:CDS |
| TGTCAGAGGCTTCAATTTCC+CGG | 0.399457 | 2.4:-7179797 | None:intergenic |
| TCGATATCTAAATGATTAGT+TGG | 0.399920 | 2.4:-7181761 | None:intergenic |
| GAAAGGATGAGAGCAGCTAT+TGG | 0.409176 | 2.4:+7181614 | MS.gene31234:CDS |
| TCTACGCTACTTACAGCAAT+AGG | 0.411200 | 2.4:+7179726 | MS.gene31234:CDS |
| CTGGTTGGACCCAATGGAGC+TGG | 0.414943 | 2.4:+7181419 | MS.gene31234:CDS |
| TCTACAAGAACATTGACTTC+GGG | 0.415122 | 2.4:+7181372 | MS.gene31234:CDS |
| ACCTCCACAAACTGGAGAAC+AGG | 0.416071 | 2.4:-7181320 | None:intergenic |
| TTCAGACGTTATGGTTTGCT+TGG | 0.417788 | 2.4:+7179684 | MS.gene31234:intron |
| CATAATATCACCTTCCCATC+TGG | 0.420837 | 2.4:-7181909 | None:intergenic |
| ATATCCATGTGGTCTGGAAT+AGG | 0.420995 | 2.4:-7179762 | None:intergenic |
| AGACACCATTAAGGAAATCT+TGG | 0.427382 | 2.4:-7180992 | None:intergenic |
| GATGCCTATGAGAAATTTAT+CGG | 0.431894 | 2.4:+7181667 | MS.gene31234:CDS |
| TGGATATTTATCACCTTAGC+CGG | 0.433721 | 2.4:+7179778 | MS.gene31234:CDS |
| CCCACCTGTACTGCTTCATC+TGG | 0.435159 | 2.4:-7181109 | None:intergenic |
| AATCACCTGTCATAAGCTTC+AGG | 0.435857 | 2.4:-7181454 | None:intergenic |
| ATTGGGAAGTTTGGATTGTC+GGG | 0.439397 | 2.4:+7181632 | MS.gene31234:CDS |
| GGGTCCAACCAGAGCAATCC+TGG | 0.440264 | 2.4:-7181408 | None:intergenic |
| TCTTTATCAGTTACTTTCCA+TGG | 0.449572 | 2.4:+7179514 | MS.gene31234:CDS |
| TCCTTTCTTCCTCATTTCCA+GGG | 0.450321 | 2.4:-7181598 | None:intergenic |
| GACTCCAGGATTGCTCTGGT+TGG | 0.450992 | 2.4:+7181404 | MS.gene31234:CDS |
| CAAATGTCACCTCCACAAAC+TGG | 0.453285 | 2.4:-7181328 | None:intergenic |
| GGATTTCAAGCTGCACCTAA+AGG | 0.456483 | 2.4:+7181931 | MS.gene31234:CDS |
| TATTGGGAAGTTTGGATTGT+CGG | 0.456601 | 2.4:+7181631 | MS.gene31234:CDS |
| TAGCCGAGGCATTGAATGAA+TGG | 0.457369 | 2.4:+7181798 | MS.gene31234:CDS |
| AAAGGATGAGAGCAGCTATT+GGG | 0.460692 | 2.4:+7181615 | MS.gene31234:CDS |
| TTTCTGGTGGATGGAGAATG+AGG | 0.462028 | 2.4:+7180133 | MS.gene31234:CDS |
| CAGCAAGTGAGGCTGTCTAT+AGG | 0.465288 | 2.4:-7181726 | None:intergenic |
| ACCCTGGAAATGAGGAAGAA+AGG | 0.466407 | 2.4:+7181597 | MS.gene31234:CDS |
| GTGCTCTTCCCAGCTCCATT+GGG | 0.466440 | 2.4:-7181428 | None:intergenic |
| TTGTTCCCATCCTCTCTCTA+GGG | 0.473216 | 2.4:+7178232 | MS.gene31234:CDS |
| GAGAAAGAAGCTGAAATTCT+GGG | 0.473580 | 2.4:+7179870 | MS.gene31234:CDS |
| TTTGGTTCCTTTAGATGGCA+TGG | 0.476128 | 2.4:+7181475 | MS.gene31234:CDS |
| TCAGGTGGCCCATGAGATAT+GGG | 0.476686 | 2.4:+7181865 | MS.gene31234:CDS |
| AGGCTTCAATTTCCCGGCTA+AGG | 0.478428 | 2.4:-7179791 | None:intergenic |
| TGATAAATATCCATGTGGTC+TGG | 0.478691 | 2.4:-7179768 | None:intergenic |
| TCTTCTCTTTACTCTGAGCT+TGG | 0.478713 | 2.4:-7181202 | None:intergenic |
| AGCTGAAATTCTGGGAGCAC+AGG | 0.481031 | 2.4:+7179878 | MS.gene31234:CDS |
| TTTAGACTCCAGGATTGCTC+TGG | 0.486928 | 2.4:+7181400 | MS.gene31234:CDS |
| GAATATCCCTAGAGAGAGGA+TGG | 0.495874 | 2.4:-7178238 | None:intergenic |
| CAAGCTGCACCTAAAGGAAA+AGG | 0.496432 | 2.4:+7181937 | MS.gene31234:CDS |
| TCGGGGTCGATTTAGACTCC+AGG | 0.496794 | 2.4:+7181390 | MS.gene31234:CDS |
| TTTGGAAGCATGTGTGTGGC+TGG | 0.497037 | 2.4:+7180920 | MS.gene31234:CDS |
| TGGTTTCAACAAGCAGATGC+AGG | 0.504046 | 2.4:+7180092 | MS.gene31234:CDS |
| AGAACCAGATGAAGCAGTAC+AGG | 0.507231 | 2.4:+7181105 | MS.gene31234:CDS |
| TTGCTTGGATTGAACGGCTG+TGG | 0.511780 | 2.4:+7179699 | MS.gene31234:CDS |
| ATTGCTCTGGTTGGACCCAA+TGG | 0.513877 | 2.4:+7181413 | MS.gene31234:CDS |
| TCATTAGTTGTGACGAGGAA+AGG | 0.515894 | 2.4:+7179838 | MS.gene31234:CDS |
| CGACGAACCATGCCATCTAA+AGG | 0.517489 | 2.4:-7181482 | None:intergenic |
| GTGAAATCACAACCAAAATA+CGG | 0.518081 | 2.4:-7180965 | None:intergenic |
| AGGTTCATCAAGTAGAAGAA+TGG | 0.518332 | 2.4:-7180190 | None:intergenic |
| GACACCATTAAGGAAATCTT+GGG | 0.522650 | 2.4:-7180991 | None:intergenic |
| TCTAATAGTTGATTCTGAGT+TGG | 0.522759 | 2.4:+7179543 | MS.gene31234:CDS |
| CCCTCCTCTCTTTGCAGCGG+CGG | 0.522773 | 2.4:-7178099 | None:intergenic |
| ATCCCATTCATTCAATGCCT+CGG | 0.523753 | 2.4:-7181801 | None:intergenic |
| GAAGCAGTACAGGTGGGAGC+AGG | 0.526521 | 2.4:+7181115 | MS.gene31234:CDS |
| TGGATTGTCGGGTAAAGCAC+AGG | 0.529724 | 2.4:+7181643 | MS.gene31234:CDS |
| AGCCGAGGCATTGAATGAAT+GGG | 0.531518 | 2.4:+7181799 | MS.gene31234:CDS |
| TTATTTATGTTCCAGGAGGA+TGG | 0.532051 | 2.4:+7179976 | MS.gene31234:intron |
| TCATCAAGTAGAAGAATGGT+TGG | 0.533303 | 2.4:-7180186 | None:intergenic |
| CAGCACACACCCATATCTCA+TGG | 0.540856 | 2.4:-7181874 | None:intergenic |
| GCCGCCGCTGCAAAGAGAGG+AGG | 0.541617 | 2.4:+7178098 | MS.gene31234:CDS |
| ATCTACAAGAACATTGACTT+CGG | 0.541734 | 2.4:+7181371 | MS.gene31234:CDS |
| AGCCTCTGACATGTCTGCGT+TGG | 0.547223 | 2.4:+7179809 | MS.gene31234:CDS |
| CAACTATTAGATCATGTCCA+TGG | 0.547850 | 2.4:-7179531 | None:intergenic |
| AAAAGAGTACCCTGGAAATG+AGG | 0.547885 | 2.4:+7181589 | MS.gene31234:CDS |
| TATGGTTTGCTTGGATTGAA+CGG | 0.549563 | 2.4:+7179693 | MS.gene31234:CDS |
| ACCTGTTCTCCAGTTTGTGG+AGG | 0.551730 | 2.4:+7181319 | MS.gene31234:CDS |
| CATCAAGTAGAAGAATGGTT+GGG | 0.553770 | 2.4:-7180185 | None:intergenic |
| GCTGCCGCCGCTGCAAAGAG+AGG | 0.556803 | 2.4:+7178095 | MS.gene31234:CDS |
| ATATCTGATCGGACATGCAC+GGG | 0.557255 | 2.4:+7178203 | MS.gene31234:CDS |
| GGAGCAGATTGCCTCAATGA+AGG | 0.557274 | 2.4:+7181136 | MS.gene31234:CDS |
| TGGTTGGACCCAATGGAGCT+GGG | 0.558985 | 2.4:+7181420 | MS.gene31234:CDS |
| TGCAATGTATTCCTTCATTG+AGG | 0.559633 | 2.4:-7181147 | None:intergenic |
| CCGCCGCTGCAAAGAGAGGA+GGG | 0.562371 | 2.4:+7178099 | MS.gene31234:CDS |
| AAAGGCGTCGGAGAAGGCGG+TGG | 0.562809 | 2.4:+7178148 | MS.gene31234:CDS |
| AGTTGGAGCTAAATTATGGA+AGG | 0.564374 | 2.4:+7179560 | MS.gene31234:CDS |
| ACCAGATGAAGCAGTACAGG+TGG | 0.568916 | 2.4:+7181108 | MS.gene31234:CDS |
| ACGTTCCTGAAGCTTATGAC+AGG | 0.572055 | 2.4:+7181449 | MS.gene31234:CDS |
| CGCTGCAAAGAGAGGAGGGA+AGG | 0.574075 | 2.4:+7178103 | MS.gene31234:CDS |
| CTGATCAAACAGTGACCAGA+TGG | 0.574106 | 2.4:+7181894 | MS.gene31234:CDS |
| CCTATGAGAAATTTATCGGA+TGG | 0.574573 | 2.4:+7181671 | MS.gene31234:CDS |
| GGATATTTATCACCTTAGCC+GGG | 0.580006 | 2.4:+7179779 | MS.gene31234:CDS |
| GATATCTGATCGGACATGCA+CGG | 0.582650 | 2.4:+7178202 | MS.gene31234:CDS |
| CACAAACTGGAGAACAGGTG+GGG | 0.584349 | 2.4:-7181315 | None:intergenic |
| TCCACAAACTGGAGAACAGG+TGG | 0.586563 | 2.4:-7181317 | None:intergenic |
| ATGTTCCAGGAGGATGGTGG+TGG | 0.591374 | 2.4:+7179982 | MS.gene31234:intron |
| TACATTGCACGATTTGGCCA+TGG | 0.600697 | 2.4:+7181161 | MS.gene31234:CDS |
| TTTATGTTCCAGGAGGATGG+TGG | 0.602285 | 2.4:+7179979 | MS.gene31234:intron |
| CCACAAACTGGAGAACAGGT+GGG | 0.611917 | 2.4:-7181316 | None:intergenic |
| GAATGAATGGGATGGTGGCA+TGG | 0.612616 | 2.4:+7181811 | MS.gene31234:CDS |
| CTGCACCTAAAGGAAAAGGC+GGG | 0.612988 | 2.4:+7181941 | MS.gene31234:CDS |
| GAAATTTATCGGATGGACAA+AGG | 0.614374 | 2.4:+7181678 | MS.gene31234:CDS |
| TCATCTAATAGCAGCAAGTG+AGG | 0.614956 | 2.4:-7181737 | None:intergenic |
| GCGCGGTGGACTTACAGAGA+AGG | 0.616834 | 2.4:+7181241 | MS.gene31234:CDS |
| TAGATTTGGAAGCATGTGTG+TGG | 0.617264 | 2.4:+7180916 | MS.gene31234:intron |
| TAGTGTTGCTAACGGAATTG+GGG | 0.617899 | 2.4:+7178172 | MS.gene31234:CDS |
| GCTTCCTATTCCAGACCACA+TGG | 0.623990 | 2.4:+7179758 | MS.gene31234:CDS |
| GCTGCACCTAAAGGAAAAGG+CGG | 0.625202 | 2.4:+7181940 | MS.gene31234:CDS |
| ACAAACTGGAGAACAGGTGG+GGG | 0.628419 | 2.4:-7181314 | None:intergenic |
| AGCACACACCCATATCTCAT+GGG | 0.630239 | 2.4:-7181873 | None:intergenic |
| CAAACAGTGACCAGATGGGA+AGG | 0.631024 | 2.4:+7181899 | MS.gene31234:CDS |
| AATATCCCTAGAGAGAGGAT+GGG | 0.632152 | 2.4:-7178237 | None:intergenic |
| GACAATTGACTCGTTAGCCG+AGG | 0.636847 | 2.4:+7181784 | MS.gene31234:CDS |
| CGGTGGACTTACAGAGAAGG+TGG | 0.640373 | 2.4:+7181244 | MS.gene31234:CDS |
| GGGATATTCAGATATCTGAT+CGG | 0.640506 | 2.4:+7178192 | MS.gene31234:CDS |
| GATGAACCTACAAATCACCT+TGG | 0.641091 | 2.4:+7180204 | MS.gene31234:CDS |
| GGAGTCGCGTGATCTTTGCA+TGG | 0.644084 | 2.4:+7181699 | MS.gene31234:CDS |
| GGTGAAATTGTGCAATGCGA+AGG | 0.646343 | 2.4:-7181514 | None:intergenic |
| TGATCAAACAGTGACCAGAT+GGG | 0.653848 | 2.4:+7181895 | MS.gene31234:CDS |
| CTACAAGAACATTGACTTCG+GGG | 0.653950 | 2.4:+7181373 | MS.gene31234:CDS |
| CTTCCCTCCTCTCTTTGCAG+CGG | 0.655854 | 2.4:-7178102 | None:intergenic |
| ACCTGAATATCCCTAGAGAG+AGG | 0.657445 | 2.4:-7178242 | None:intergenic |
| GGCTGTCATTAGTTGTGACG+AGG | 0.658773 | 2.4:+7179833 | MS.gene31234:CDS |
| CCAGATGAAGCAGTACAGGT+GGG | 0.659061 | 2.4:+7181109 | MS.gene31234:CDS |
| GCGGTGGATAGTGTTGCTAA+CGG | 0.662681 | 2.4:+7178164 | MS.gene31234:CDS |
| CTCCAACGCAGACATGTCAG+AGG | 0.671580 | 2.4:-7179811 | None:intergenic |
| GCATTGAATGAATGGGATGG+TGG | 0.687430 | 2.4:+7181806 | MS.gene31234:CDS |
| TTTATGATAAAAGAGTACCC+TGG | 0.697631 | 2.4:+7181581 | MS.gene31234:CDS |
| GAGGCATTGAATGAATGGGA+TGG | 0.699572 | 2.4:+7181803 | MS.gene31234:CDS |
| GGAAGCATGTGTGTGGCTGG+AGG | 0.706083 | 2.4:+7180923 | MS.gene31234:CDS |
| AATGGTTGGGTTCATAAACA+GGG | 0.707136 | 2.4:-7180172 | None:intergenic |
| TAAGGTGATAAATATCCATG+TGG | 0.717137 | 2.4:-7179773 | None:intergenic |
| GGTCTGGAATAGGAAGCTCA+CGG | 0.726335 | 2.4:-7179752 | None:intergenic |
| GTTTCCCCACATCAACAAAG+CGG | 0.731629 | 2.4:-7181289 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATAAATATTTGTAGATT+TGG | + | chr2.4:7180902-7180921 | MS.gene31234:intron | 10.0% |
| !!! | AGATTTAATTAATTGTTATT+CGG | + | chr2.4:7178312-7178331 | MS.gene31234:intron | 10.0% |
| !! | GACAATTAAATGTATTTATA+TGG | - | chr2.4:7179426-7179445 | None:intergenic | 15.0% |
| !! | TAATAATTAATTGAGAATCT+GGG | - | chr2.4:7179177-7179196 | None:intergenic | 15.0% |
| !! | TTAATAATTAATTGAGAATC+TGG | - | chr2.4:7179178-7179197 | None:intergenic | 15.0% |
| !! | TTCAATATTGAACAATAAAA+AGG | + | chr2.4:7179391-7179410 | MS.gene31234:intron | 15.0% |
| !!! | AAAAAAACTAACACAATTTT+TGG | - | chr2.4:7178553-7178572 | None:intergenic | 15.0% |
| !!! | AATTATTAATCCCATATTTT+CGG | + | chr2.4:7179189-7179208 | MS.gene31234:intron | 15.0% |
| !!! | ACTTTTATTAACAAAATTAC+GGG | + | chr2.4:7178624-7178643 | MS.gene31234:intron | 15.0% |
| !!! | AGAAGCTTTTTTTTTTTTTT+TGG | - | chr2.4:7178753-7178772 | None:intergenic | 15.0% |
| !!! | CTTTTTTTTTTTTTTTGGAA+TGG | - | chr2.4:7178748-7178767 | None:intergenic | 15.0% |
| !!! | GACTTTTATTAACAAAATTA+CGG | + | chr2.4:7178623-7178642 | MS.gene31234:intron | 15.0% |
| !!! | GTTATTGATTAGTTTAATTT+TGG | + | chr2.4:7178282-7178301 | MS.gene31234:intron | 15.0% |
| !!! | TACATTAACATCTAATTTTA+TGG | + | chr2.4:7180655-7180674 | MS.gene31234:intron | 15.0% |
| !!! | TCAAAATCAATTTTTGTATT+AGG | + | chr2.4:7178992-7179011 | MS.gene31234:intron | 15.0% |
| !! | AGAATTATGTTGAAATTTGA+AGG | - | chr2.4:7179057-7179076 | None:intergenic | 20.0% |
| !! | ATTCTTACTGTAATATTTGT+TGG | + | chr2.4:7179637-7179656 | MS.gene31234:intron | 20.0% |
| !! | GAACATAAATAAATAAAGTG+TGG | - | chr2.4:7179968-7179987 | None:intergenic | 20.0% |
| !! | TAAGTCAGAAGATATAAATA+TGG | - | chr2.4:7179601-7179620 | None:intergenic | 20.0% |
| !! | TTTGTTCTTTATGTTATGTA+TGG | + | chr2.4:7178352-7178371 | MS.gene31234:intron | 20.0% |
| !!! | AAAAAAAAGCTTCTCTTTTA+AGG | + | chr2.4:7178759-7178778 | MS.gene31234:intron | 20.0% |
| !!! | ACACTTCAAATTATTTTTCA+TGG | - | chr2.4:7178967-7178986 | None:intergenic | 20.0% |
| !!! | ACTTTATTTATTTATGTTCC+AGG | + | chr2.4:7179969-7179988 | MS.gene31234:intron | 20.0% |
| !!! | ATTAACATCTAATTTTATGG+AGG | + | chr2.4:7180658-7180677 | MS.gene31234:intron | 20.0% |
| !!! | TTTTTCAATTGAAAATGATC+TGG | + | chr2.4:7179085-7179104 | MS.gene31234:intron | 20.0% |
| ! | AAAAACATTGCAAGATATGA+AGG | - | chr2.4:7180799-7180818 | None:intergenic | 25.0% |
| ! | AAAACATTGCAAGATATGAA+GGG | - | chr2.4:7180798-7180817 | None:intergenic | 25.0% |
| ! | ATATCTTCTGACTTATGAAT+AGG | + | chr2.4:7179606-7179625 | MS.gene31234:intron | 25.0% |
| ! | CAGTCATAATAATCAGAATT+AGG | - | chr2.4:7178936-7178955 | None:intergenic | 25.0% |
| ! | GTATGCTTTGATAAAACATT+TGG | + | chr2.4:7180490-7180509 | MS.gene31234:intron | 25.0% |
| ! | TCAGACTAAATTCAATGTAT+TGG | + | chr2.4:7180760-7180779 | MS.gene31234:intron | 25.0% |
| ! | TCGATATCTAAATGATTAGT+TGG | - | chr2.4:7181764-7181783 | None:intergenic | 25.0% |
| ! | TCTATGACTTGAGTTTATAA+AGG | - | chr2.4:7178605-7178624 | None:intergenic | 25.0% |
| ! | TTATTTATTTATGTTCCAGG+AGG | + | chr2.4:7179972-7179991 | MS.gene31234:intron | 25.0% |
| ! | TTTCAACATAATTCTTGTCT+TGG | + | chr2.4:7179062-7179081 | MS.gene31234:intron | 25.0% |
| !! | AAAGCATCATCATAACTAAA+AGG | - | chr2.4:7180741-7180760 | None:intergenic | 25.0% |
| !! | AATGAAAGAGTTACTCTTTT+CGG | - | chr2.4:7180242-7180261 | None:intergenic | 25.0% |
| !! | ACTGTTTTCATAATCTATTC+TGG | + | chr2.4:7178787-7178806 | MS.gene31234:intron | 25.0% |
| !! | GTTGTATTCTATTGACATTT+TGG | + | chr2.4:7179467-7179486 | MS.gene31234:intron | 25.0% |
| !!! | ATAAACAGAGATTTTGACAT+GGG | - | chr2.4:7179347-7179366 | None:intergenic | 25.0% |
| !!! | TAACTTATTTTCAGACGTTA+TGG | + | chr2.4:7179675-7179694 | MS.gene31234:intron | 25.0% |
| !!! | TTTTTAATTGAAGGTCACAT+GGG | + | chr2.4:7180345-7180364 | MS.gene31234:intron | 25.0% |
| !!! | TTTTTTAATTGAAGGTCACA+TGG | + | chr2.4:7180344-7180363 | MS.gene31234:intron | 25.0% |
| AAAAAGCTGAAGTTCTATAC+TGG | + | chr2.4:7181041-7181060 | MS.gene31234:CDS | 30.0% | |
| AAATAGAAGATGCAAGTGAA+TGG | - | chr2.4:7180601-7180620 | None:intergenic | 30.0% | |
| ATCCATGTCTTATACTTGAT+AGG | - | chr2.4:7180396-7180415 | None:intergenic | 30.0% | |
| CATATATTGCATTGTATCTC+TGG | + | chr2.4:7179125-7179144 | MS.gene31234:intron | 30.0% | |
| GATGCCTATGAGAAATTTAT+CGG | + | chr2.4:7181667-7181686 | MS.gene31234:CDS | 30.0% | |
| GTGAAATCACAACCAAAATA+CGG | - | chr2.4:7180968-7180987 | None:intergenic | 30.0% | |
| GTTTGAAAAATTACCACCAA+GGG | - | chr2.4:7178914-7178933 | None:intergenic | 30.0% | |
| TAAATTATTGTAGCTAGCGT+GGG | + | chr2.4:7179255-7179274 | MS.gene31234:intron | 30.0% | |
| TAAGGTGATAAATATCCATG+TGG | - | chr2.4:7179776-7179795 | None:intergenic | 30.0% | |
| TAAGTGCTTATGCTATAATC+TGG | - | chr2.4:7178673-7178692 | None:intergenic | 30.0% | |
| TCAATGCATAAAACATGACA+AGG | - | chr2.4:7180287-7180306 | None:intergenic | 30.0% | |
| TGTCCTTATAGTCTAATCTT+TGG | + | chr2.4:7180841-7180860 | MS.gene31234:intron | 30.0% | |
| TTCTTGTAGATGAGATTATC+AGG | - | chr2.4:7181362-7181381 | None:intergenic | 30.0% | |
| TTGATGCTTTGTATCATCAT+GGG | + | chr2.4:7180545-7180564 | MS.gene31234:intron | 30.0% | |
| TTTCATAAGTTCTTACCGAA+CGG | + | chr2.4:7178837-7178856 | MS.gene31234:intron | 30.0% | |
| TTTGATGCTTTGTATCATCA+TGG | + | chr2.4:7180544-7180563 | MS.gene31234:intron | 30.0% | |
| ! | AACAATGAACAGAGTTGATT+TGG | + | chr2.4:7178443-7178462 | MS.gene31234:intron | 30.0% |
| ! | ATATAGTCTTGGGTAGTTAT+CGG | + | chr2.4:7180710-7180729 | MS.gene31234:intron | 30.0% |
| ! | ATGAAAGAGTTACTCTTTTC+GGG | - | chr2.4:7180241-7180260 | None:intergenic | 30.0% |
| ! | GAAGAAATTTGACCGTATTT+TGG | + | chr2.4:7180953-7180972 | MS.gene31234:CDS | 30.0% |
| ! | GGTACTCTTTTATCATAAAC+TGG | - | chr2.4:7181580-7181599 | None:intergenic | 30.0% |
| ! | TCTAATAGTTGATTCTGAGT+TGG | + | chr2.4:7179543-7179562 | MS.gene31234:CDS | 30.0% |
| ! | TCTTTATCAGTTACTTTCCA+TGG | + | chr2.4:7179514-7179533 | MS.gene31234:CDS | 30.0% |
| ! | TGATTTTAGGCTCATAAATC+AGG | + | chr2.4:7181847-7181866 | MS.gene31234:CDS | 30.0% |
| !! | ATCTACAAGAACATTGACTT+CGG | + | chr2.4:7181371-7181390 | MS.gene31234:CDS | 30.0% |
| !! | CATAAACAGAGATTTTGACA+TGG | - | chr2.4:7179348-7179367 | None:intergenic | 30.0% |
| !! | GCTGAAATTTTATTTGGTCT+TGG | + | chr2.4:7180072-7180091 | MS.gene31234:CDS | 30.0% |
| !! | GGATGATTAGTTCTTTTGTA+GGG | + | chr2.4:7178373-7178392 | MS.gene31234:intron | 30.0% |
| !! | TGCTTTGAGTAAAGTTTTCT+TGG | + | chr2.4:7180466-7180485 | MS.gene31234:intron | 30.0% |
| !! | TGGATGATTAGTTCTTTTGT+AGG | + | chr2.4:7178372-7178391 | MS.gene31234:intron | 30.0% |
| !! | TTCTGGTTAGTCATGATTTT+AGG | + | chr2.4:7181834-7181853 | MS.gene31234:CDS | 30.0% |
| !! | TTTATGATAAAAGAGTACCC+TGG | + | chr2.4:7181581-7181600 | MS.gene31234:CDS | 30.0% |
| !!! | AATTTTTGGTGCTGAAAAAC+GGG | - | chr2.4:7178539-7178558 | None:intergenic | 30.0% |
| !!! | CAATTTTTGGTGCTGAAAAA+CGG | - | chr2.4:7178540-7178559 | None:intergenic | 30.0% |
| !!! | GACTCGTGTTTTTTAATTGA+AGG | + | chr2.4:7180336-7180355 | MS.gene31234:intron | 30.0% |
| AAGGAATACATTGCACGATT+TGG | + | chr2.4:7181155-7181174 | MS.gene31234:CDS | 35.0% | |
| AATGGTTGGGTTCATAAACA+GGG | - | chr2.4:7180175-7180194 | None:intergenic | 35.0% | |
| ACGAACAAACTAGAACTAGA+AGG | - | chr2.4:7180429-7180448 | None:intergenic | 35.0% | |
| AGACACCATTAAGGAAATCT+TGG | - | chr2.4:7180995-7181014 | None:intergenic | 35.0% | |
| AGAGAAGACTCTTGCAAAAA+TGG | + | chr2.4:7181217-7181236 | MS.gene31234:CDS | 35.0% | |
| AGGTTCATCAAGTAGAAGAA+TGG | - | chr2.4:7180193-7180212 | None:intergenic | 35.0% | |
| AGTTGGAGCTAAATTATGGA+AGG | + | chr2.4:7179560-7179579 | MS.gene31234:CDS | 35.0% | |
| CAACTATTAGATCATGTCCA+TGG | - | chr2.4:7179534-7179553 | None:intergenic | 35.0% | |
| CATCAAGTAGAAGAATGGTT+GGG | - | chr2.4:7180188-7180207 | None:intergenic | 35.0% | |
| CCATCCGATAAATTTCTCAT+AGG | - | chr2.4:7181674-7181693 | None:intergenic | 35.0% | |
| CCGTAAAAGCAAAACAACTT+GGG | - | chr2.4:7179939-7179958 | None:intergenic | 35.0% | |
| CCTATGAGAAATTTATCGGA+TGG | + | chr2.4:7181671-7181690 | MS.gene31234:CDS | 35.0% | |
| CGAACAAACTAGAACTAGAA+GGG | - | chr2.4:7180428-7180447 | None:intergenic | 35.0% | |
| CGACCAAAGATTAGACTATA+AGG | - | chr2.4:7180847-7180866 | None:intergenic | 35.0% | |
| CTAAATTATTGTAGCTAGCG+TGG | + | chr2.4:7179254-7179273 | MS.gene31234:intron | 35.0% | |
| CTTGACTGAAAAACTAGACT+TGG | + | chr2.4:7181541-7181560 | MS.gene31234:CDS | 35.0% | |
| CTTTACTCAAAGCAACATAG+AGG | - | chr2.4:7180460-7180479 | None:intergenic | 35.0% | |
| GAAATATTACCTACCTCTGA+AGG | - | chr2.4:7179374-7179393 | None:intergenic | 35.0% | |
| GAAATTTATCGGATGGACAA+AGG | + | chr2.4:7181678-7181697 | MS.gene31234:CDS | 35.0% | |
| GACACCATTAAGGAAATCTT+GGG | - | chr2.4:7180994-7181013 | None:intergenic | 35.0% | |
| GAGAAAGAAGCTGAAATTCT+GGG | + | chr2.4:7179870-7179889 | MS.gene31234:CDS | 35.0% | |
| GCCAAAATGATTTCACTCTT+CGG | - | chr2.4:7178494-7178513 | None:intergenic | 35.0% | |
| GCGTTACATTTATCCAATCA+GGG | - | chr2.4:7178516-7178535 | None:intergenic | 35.0% | |
| GCTTTGATAAAACATTTGGC+AGG | + | chr2.4:7180494-7180513 | MS.gene31234:intron | 35.0% | |
| GGGATATTCAGATATCTGAT+CGG | + | chr2.4:7178192-7178211 | MS.gene31234:CDS | 35.0% | |
| GGTTTGAAAAATTACCACCA+AGG | - | chr2.4:7178915-7178934 | None:intergenic | 35.0% | |
| GTTGAAATTTGAAGGACACA+AGG | - | chr2.4:7179049-7179068 | None:intergenic | 35.0% | |
| TAAGCACTTATAAACCCGTT+CGG | - | chr2.4:7178855-7178874 | None:intergenic | 35.0% | |
| TATTGGGAAGTTTGGATTGT+CGG | + | chr2.4:7181631-7181650 | MS.gene31234:CDS | 35.0% | |
| TATTTGTGCAGACACCATTA+AGG | - | chr2.4:7181004-7181023 | None:intergenic | 35.0% | |
| TCATCAAGTAGAAGAATGGT+TGG | - | chr2.4:7180189-7180208 | None:intergenic | 35.0% | |
| TCCGTAAAAGCAAAACAACT+TGG | - | chr2.4:7179940-7179959 | None:intergenic | 35.0% | |
| TCGTACTCTGATATAGTCTT+GGG | + | chr2.4:7180700-7180719 | MS.gene31234:intron | 35.0% | |
| TCTGGAAAAAAAGAGAGAAC+TGG | + | chr2.4:7179143-7179162 | MS.gene31234:intron | 35.0% | |
| TCTGTTTATGAATCCTTCAG+AGG | + | chr2.4:7179358-7179377 | MS.gene31234:intron | 35.0% | |
| TGATAAATATCCATGTGGTC+TGG | - | chr2.4:7179771-7179790 | None:intergenic | 35.0% | |
| TGCAATGTATTCCTTCATTG+AGG | - | chr2.4:7181150-7181169 | None:intergenic | 35.0% | |
| TGCCTATCAAGTATAAGACA+TGG | + | chr2.4:7180391-7180410 | MS.gene31234:intron | 35.0% | |
| TGGATATTTATCACCTTAGC+CGG | + | chr2.4:7179778-7179797 | MS.gene31234:CDS | 35.0% | |
| TTATTTATGTTCCAGGAGGA+TGG | + | chr2.4:7179976-7179995 | MS.gene31234:intron | 35.0% | |
| TTCATAAGTTCTTACCGAAC+GGG | + | chr2.4:7178838-7178857 | MS.gene31234:intron | 35.0% | |
| TTCGTACTCTGATATAGTCT+TGG | + | chr2.4:7180699-7180718 | MS.gene31234:intron | 35.0% | |
| TTTATGAATCCTTCAGAGGT+AGG | + | chr2.4:7179362-7179381 | MS.gene31234:intron | 35.0% | |
| TTTGGTCGTATATCATAGCT+GGG | + | chr2.4:7180859-7180878 | MS.gene31234:intron | 35.0% | |
| ! | AAGAAGACACGTGATTTTTC+TGG | + | chr2.4:7180117-7180136 | MS.gene31234:CDS | 35.0% |
| ! | ATAGTGTTGCTAACGGAATT+GGG | + | chr2.4:7178171-7178190 | MS.gene31234:CDS | 35.0% |
| ! | CACTTGAACGAGTTTTTGAA+CGG | + | chr2.4:7180010-7180029 | MS.gene31234:CDS | 35.0% |
| ! | TCCGAAGAGTGAAATCATTT+TGG | + | chr2.4:7178490-7178509 | MS.gene31234:intron | 35.0% |
| ! | TCTGAGTTGGAGCTAAATTA+TGG | + | chr2.4:7179556-7179575 | MS.gene31234:CDS | 35.0% |
| ! | TGAAAGAGTTACTCTTTTCG+GGG | - | chr2.4:7180240-7180259 | None:intergenic | 35.0% |
| ! | TTTTAGGCTCATAAATCAGG+TGG | + | chr2.4:7181850-7181869 | MS.gene31234:CDS | 35.0% |
| !! | CCCAAGTTGTTTTGCTTTTA+CGG | + | chr2.4:7179936-7179955 | MS.gene31234:intron | 35.0% |
| !! | CGTGCTGCTGAAATTTTATT+TGG | + | chr2.4:7180066-7180085 | MS.gene31234:CDS | 35.0% |
| !! | CTAGTTCTAGTTTGTTCGTT+GGG | + | chr2.4:7180430-7180449 | MS.gene31234:intron | 35.0% |
| !! | TATGGTTTGCTTGGATTGAA+CGG | + | chr2.4:7179693-7179712 | MS.gene31234:CDS | 35.0% |
| !! | TCTACAAGAACATTGACTTC+GGG | + | chr2.4:7181372-7181391 | MS.gene31234:CDS | 35.0% |
| !! | TCTAGTTCTAGTTTGTTCGT+TGG | + | chr2.4:7180429-7180448 | MS.gene31234:intron | 35.0% |
| !!! | ATTTTTGGTGCTGAAAAACG+GGG | - | chr2.4:7178538-7178557 | None:intergenic | 35.0% |
| !!! | TCAGCTTTTTGTTTTGCATG+TGG | - | chr2.4:7181031-7181050 | None:intergenic | 35.0% |
| AAAGGATGAGAGCAGCTATT+GGG | + | chr2.4:7181615-7181634 | MS.gene31234:CDS | 40.0% | |
| AATATCCCTAGAGAGAGGAT+GGG | - | chr2.4:7178240-7178259 | None:intergenic | 40.0% | |
| AATCACCTGTCATAAGCTTC+AGG | - | chr2.4:7181457-7181476 | None:intergenic | 40.0% | |
| ATCCCATTCATTCAATGCCT+CGG | - | chr2.4:7181804-7181823 | None:intergenic | 40.0% | |
| ATCCTTTCTTCCTCATTTCC+AGG | - | chr2.4:7181602-7181621 | None:intergenic | 40.0% | |
| ATGCCAGTGTCCGAAAATAT+GGG | - | chr2.4:7179202-7179221 | None:intergenic | 40.0% | |
| ATTGGGAAGTTTGGATTGTC+GGG | + | chr2.4:7181632-7181651 | MS.gene31234:CDS | 40.0% | |
| CACTCCCAAGATTTCCTTAA+TGG | + | chr2.4:7180987-7181006 | MS.gene31234:CDS | 40.0% | |
| CAGATGGGAAGGTGATATTA+TGG | + | chr2.4:7181910-7181929 | MS.gene31234:CDS | 40.0% | |
| CATAATATCACCTTCCCATC+TGG | - | chr2.4:7181912-7181931 | None:intergenic | 40.0% | |
| CTTTGGTCGTATATCATAGC+TGG | + | chr2.4:7180858-7180877 | MS.gene31234:intron | 40.0% | |
| GAAAAAAGCTGCTCAGAAGA+AGG | + | chr2.4:7178073-7178092 | MS.gene31234:CDS | 40.0% | |
| GAAGCTTATGACAGGTGATT+TGG | + | chr2.4:7181457-7181476 | MS.gene31234:CDS | 40.0% | |
| GAATGGTTGGGTTCATAAAC+AGG | - | chr2.4:7180176-7180195 | None:intergenic | 40.0% | |
| GATGAACCTACAAATCACCT+TGG | + | chr2.4:7180204-7180223 | MS.gene31234:CDS | 40.0% | |
| GGAGAAAGAAGCTGAAATTC+TGG | + | chr2.4:7179869-7179888 | MS.gene31234:CDS | 40.0% | |
| GGATATTTATCACCTTAGCC+GGG | + | chr2.4:7179779-7179798 | MS.gene31234:CDS | 40.0% | |
| GGCGTTACATTTATCCAATC+AGG | - | chr2.4:7178517-7178536 | None:intergenic | 40.0% | |
| TATGCCAGTGTCCGAAAATA+TGG | - | chr2.4:7179203-7179222 | None:intergenic | 40.0% | |
| TCATCTAATAGCAGCAAGTG+AGG | - | chr2.4:7181740-7181759 | None:intergenic | 40.0% | |
| TCATTAGTTGTGACGAGGAA+AGG | + | chr2.4:7179838-7179857 | MS.gene31234:CDS | 40.0% | |
| TCCTTTCTTCCTCATTTCCA+GGG | - | chr2.4:7181601-7181620 | None:intergenic | 40.0% | |
| TCTACGCTACTTACAGCAAT+AGG | + | chr2.4:7179726-7179745 | MS.gene31234:CDS | 40.0% | |
| TCTTCTCTTTACTCTGAGCT+TGG | - | chr2.4:7181205-7181224 | None:intergenic | 40.0% | |
| TGACGAGGAAAGGTTGAAAT+TGG | + | chr2.4:7179848-7179867 | MS.gene31234:CDS | 40.0% | |
| TGATCAAACAGTGACCAGAT+GGG | + | chr2.4:7181895-7181914 | MS.gene31234:CDS | 40.0% | |
| ! | AAGACACGTGATTTTTCTGG+TGG | + | chr2.4:7180120-7180139 | MS.gene31234:CDS | 40.0% |
| ! | AATCCCATATTTTCGGACAC+TGG | + | chr2.4:7179196-7179215 | MS.gene31234:intron | 40.0% |
| ! | AATTTCAGCAGCACGCTTTT+CGG | - | chr2.4:7180061-7180080 | None:intergenic | 40.0% |
| ! | ATAAACCCGCCTTTTCCTTT+AGG | - | chr2.4:7181949-7181968 | None:intergenic | 40.0% |
| ! | ATATCCATGTGGTCTGGAAT+AGG | - | chr2.4:7179765-7179784 | None:intergenic | 40.0% |
| ! | GATAGTGTTGCTAACGGAAT+TGG | + | chr2.4:7178170-7178189 | MS.gene31234:CDS | 40.0% |
| ! | TAGATTTGGAAGCATGTGTG+TGG | + | chr2.4:7180916-7180935 | MS.gene31234:intron | 40.0% |
| ! | TAGTGTTGCTAACGGAATTG+GGG | + | chr2.4:7178172-7178191 | MS.gene31234:CDS | 40.0% |
| ! | TTTGGTTCCTTTAGATGGCA+TGG | + | chr2.4:7181475-7181494 | MS.gene31234:CDS | 40.0% |
| !! | AAAAGAGTACCCTGGAAATG+AGG | + | chr2.4:7181589-7181608 | MS.gene31234:CDS | 40.0% |
| !! | AGATTTTGACATGGGCTACA+TGG | - | chr2.4:7179339-7179358 | None:intergenic | 40.0% |
| !! | AGTTTTCCGCTTTGTTGATG+TGG | + | chr2.4:7181283-7181302 | MS.gene31234:CDS | 40.0% |
| !! | CTACAAGAACATTGACTTCG+GGG | + | chr2.4:7181373-7181392 | MS.gene31234:CDS | 40.0% |
| !! | CTAGTTTTTCAGTCAAGTGC+TGG | - | chr2.4:7181538-7181557 | None:intergenic | 40.0% |
| !! | GAAATCATTTTGGCCCTGAT+TGG | + | chr2.4:7178500-7178519 | MS.gene31234:intron | 40.0% |
| !! | GGTGATTTGGTTCCTTTAGA+TGG | + | chr2.4:7181470-7181489 | MS.gene31234:CDS | 40.0% |
| !! | GTTTTCCGCTTTGTTGATGT+GGG | + | chr2.4:7181284-7181303 | MS.gene31234:CDS | 40.0% |
| !! | TTCAGACGTTATGGTTTGCT+TGG | + | chr2.4:7179684-7179703 | MS.gene31234:intron | 40.0% |
| !! | TTTTCCGCTTTGTTGATGTG+GGG | + | chr2.4:7181285-7181304 | MS.gene31234:CDS | 40.0% |
| AAGTGAATCCATCAGACCCT+TGG | + | chr2.4:7178895-7178914 | MS.gene31234:intron | 45.0% | |
| AATTACCACCAAGGGTCTGA+TGG | - | chr2.4:7178906-7178925 | None:intergenic | 45.0% | |
| ACCCTGGAAATGAGGAAGAA+AGG | + | chr2.4:7181597-7181616 | MS.gene31234:CDS | 45.0% | |
| ACCTGAATATCCCTAGAGAG+AGG | - | chr2.4:7178245-7178264 | None:intergenic | 45.0% | |
| ACGTTCCTGAAGCTTATGAC+AGG | + | chr2.4:7181449-7181468 | MS.gene31234:CDS | 45.0% | |
| ACTCTTGCAAAAATGGAGCG+CGG | + | chr2.4:7181224-7181243 | MS.gene31234:CDS | 45.0% | |
| AGAACCAGATGAAGCAGTAC+AGG | + | chr2.4:7181105-7181124 | MS.gene31234:CDS | 45.0% | |
| AGAGCAGCTATTGGGAAGTT+TGG | + | chr2.4:7181623-7181642 | MS.gene31234:CDS | 45.0% | |
| AGCACACACCCATATCTCAT+GGG | - | chr2.4:7181876-7181895 | None:intergenic | 45.0% | |
| ATATCTGATCGGACATGCAC+GGG | + | chr2.4:7178203-7178222 | MS.gene31234:CDS | 45.0% | |
| CAAATGTCACCTCCACAAAC+TGG | - | chr2.4:7181331-7181350 | None:intergenic | 45.0% | |
| CAAGCTGCACCTAAAGGAAA+AGG | + | chr2.4:7181937-7181956 | MS.gene31234:CDS | 45.0% | |
| CAGTTTGTGGAGGTGACATT+TGG | + | chr2.4:7181329-7181348 | MS.gene31234:CDS | 45.0% | |
| CTGATCAAACAGTGACCAGA+TGG | + | chr2.4:7181894-7181913 | MS.gene31234:CDS | 45.0% | |
| GAAAGGATGAGAGCAGCTAT+TGG | + | chr2.4:7181614-7181633 | MS.gene31234:CDS | 45.0% | |
| GAACACCTAGTCAAGCAGTT+GGG | + | chr2.4:7179293-7179312 | MS.gene31234:intron | 45.0% | |
| GAATATCCCTAGAGAGAGGA+TGG | - | chr2.4:7178241-7178260 | None:intergenic | 45.0% | |
| GATATCTGATCGGACATGCA+CGG | + | chr2.4:7178202-7178221 | MS.gene31234:CDS | 45.0% | |
| GCATTGAATGAATGGGATGG+TGG | + | chr2.4:7181806-7181825 | MS.gene31234:CDS | 45.0% | |
| GGATTTCAAGCTGCACCTAA+AGG | + | chr2.4:7181931-7181950 | MS.gene31234:CDS | 45.0% | |
| GGTGAAATTGTGCAATGCGA+AGG | - | chr2.4:7181517-7181536 | None:intergenic | 45.0% | |
| GTGCAATGCGAAGGTGATTA+TGG | - | chr2.4:7181508-7181527 | None:intergenic | 45.0% | |
| GTTTCCCCACATCAACAAAG+CGG | - | chr2.4:7181292-7181311 | None:intergenic | 45.0% | |
| TGAACACCTAGTCAAGCAGT+TGG | + | chr2.4:7179292-7179311 | MS.gene31234:intron | 45.0% | |
| TGGTTTCAACAAGCAGATGC+AGG | + | chr2.4:7180092-7180111 | MS.gene31234:CDS | 45.0% | |
| TGTCAGAGGCTTCAATTTCC+CGG | - | chr2.4:7179800-7179819 | None:intergenic | 45.0% | |
| TTGTTCCCATCCTCTCTCTA+GGG | + | chr2.4:7178232-7178251 | MS.gene31234:CDS | 45.0% | |
| TTTAGACTCCAGGATTGCTC+TGG | + | chr2.4:7181400-7181419 | MS.gene31234:CDS | 45.0% | |
| TTTATGTTCCAGGAGGATGG+TGG | + | chr2.4:7179979-7179998 | MS.gene31234:intron | 45.0% | |
| TTTGTTCCCATCCTCTCTCT+AGG | + | chr2.4:7178231-7178250 | MS.gene31234:CDS | 45.0% | |
| ! | GGGATACCAAGGTGATTTGT+AGG | - | chr2.4:7180213-7180232 | None:intergenic | 45.0% |
| ! | TACATTGCACGATTTGGCCA+TGG | + | chr2.4:7181161-7181180 | MS.gene31234:CDS | 45.0% |
| ! | TCCTCTCTCTAGGGATATTC+AGG | + | chr2.4:7178241-7178260 | MS.gene31234:CDS | 45.0% |
| ! | TGAACGAGTTTTTGAACGGC+TGG | + | chr2.4:7180014-7180033 | MS.gene31234:CDS | 45.0% |
| ! | TTTCTGGTGGATGGAGAATG+AGG | + | chr2.4:7180133-7180152 | MS.gene31234:CDS | 45.0% |
| ! | TTTTGAACGGCTGGAAGCTA+TGG | + | chr2.4:7180023-7180042 | MS.gene31234:CDS | 45.0% |
| !! | AGCCGAGGCATTGAATGAAT+GGG | + | chr2.4:7181799-7181818 | MS.gene31234:CDS | 45.0% |
| !! | AGTTACTCTTTTCGGGGAAG+AGG | - | chr2.4:7180234-7180253 | None:intergenic | 45.0% |
| !! | CACGTGATTTTTCTGGTGGA+TGG | + | chr2.4:7180124-7180143 | MS.gene31234:CDS | 45.0% |
| !! | GAGGCATTGAATGAATGGGA+TGG | + | chr2.4:7181803-7181822 | MS.gene31234:CDS | 45.0% |
| !! | GTTACTCTTTTCGGGGAAGA+GGG | - | chr2.4:7180233-7180252 | None:intergenic | 45.0% |
| !! | TAGCCGAGGCATTGAATGAA+TGG | + | chr2.4:7181798-7181817 | MS.gene31234:CDS | 45.0% |
| !! | TTCTAGTTTGTTCGTTGGGC+AGG | + | chr2.4:7180434-7180453 | MS.gene31234:intron | 45.0% |
| !!! | CTGAGCAGCTTTTTTCTTGC+TGG | - | chr2.4:7178069-7178088 | None:intergenic | 45.0% |
| !!! | GAGCTAGTTTTGCTGATCCA+TGG | - | chr2.4:7181181-7181200 | None:intergenic | 45.0% |
| ACAAACTGGAGAACAGGTGG+GGG | - | chr2.4:7181317-7181336 | None:intergenic | 50.0% | |
| ACCAGATGAAGCAGTACAGG+TGG | + | chr2.4:7181108-7181127 | MS.gene31234:CDS | 50.0% | |
| ACCTCCACAAACTGGAGAAC+AGG | - | chr2.4:7181323-7181342 | None:intergenic | 50.0% | |
| ACCTGTTCTCCAGTTTGTGG+AGG | + | chr2.4:7181319-7181338 | MS.gene31234:CDS | 50.0% | |
| AGGCTTCAATTTCCCGGCTA+AGG | - | chr2.4:7179794-7179813 | None:intergenic | 50.0% | |
| ATCAGGTGGCCCATGAGATA+TGG | + | chr2.4:7181864-7181883 | MS.gene31234:CDS | 50.0% | |
| ATTGCTCTGGTTGGACCCAA+TGG | + | chr2.4:7181413-7181432 | MS.gene31234:CDS | 50.0% | |
| CAAACAGTGACCAGATGGGA+AGG | + | chr2.4:7181899-7181918 | MS.gene31234:CDS | 50.0% | |
| CACAAACTGGAGAACAGGTG+GGG | - | chr2.4:7181318-7181337 | None:intergenic | 50.0% | |
| CAGCAAGTGAGGCTGTCTAT+AGG | - | chr2.4:7181729-7181748 | None:intergenic | 50.0% | |
| CAGCACACACCCATATCTCA+TGG | - | chr2.4:7181877-7181896 | None:intergenic | 50.0% | |
| CCACAAACTGGAGAACAGGT+GGG | - | chr2.4:7181319-7181338 | None:intergenic | 50.0% | |
| CCAGATGAAGCAGTACAGGT+GGG | + | chr2.4:7181109-7181128 | MS.gene31234:CDS | 50.0% | |
| CGACGAACCATGCCATCTAA+AGG | - | chr2.4:7181485-7181504 | None:intergenic | 50.0% | |
| CTGCACCTAAAGGAAAAGGC+GGG | + | chr2.4:7181941-7181960 | MS.gene31234:CDS | 50.0% | |
| GCTGCACCTAAAGGAAAAGG+CGG | + | chr2.4:7181940-7181959 | MS.gene31234:CDS | 50.0% | |
| GCTTCCTATTCCAGACCACA+TGG | + | chr2.4:7179758-7179777 | MS.gene31234:CDS | 50.0% | |
| GGAGCAGATTGCCTCAATGA+AGG | + | chr2.4:7181136-7181155 | MS.gene31234:CDS | 50.0% | |
| GGCTGTCATTAGTTGTGACG+AGG | + | chr2.4:7179833-7179852 | MS.gene31234:CDS | 50.0% | |
| GGCTGTGCTGTATTGTGCTT+TGG | + | chr2.4:7180566-7180585 | MS.gene31234:intron | 50.0% | |
| TCAGGTGGCCCATGAGATAT+GGG | + | chr2.4:7181865-7181884 | MS.gene31234:CDS | 50.0% | |
| TCCACAAACTGGAGAACAGG+TGG | - | chr2.4:7181320-7181339 | None:intergenic | 50.0% | |
| TGAATCCATCAGACCCTTGG+TGG | + | chr2.4:7178898-7178917 | MS.gene31234:intron | 50.0% | |
| TGGATTGTCGGGTAAAGCAC+AGG | + | chr2.4:7181643-7181662 | MS.gene31234:CDS | 50.0% | |
| TGTTCAGACACGTGCTGAAC+TGG | + | chr2.4:7181079-7181098 | MS.gene31234:CDS | 50.0% | |
| TTGCTTGGATTGAACGGCTG+TGG | + | chr2.4:7179699-7179718 | MS.gene31234:CDS | 50.0% | |
| ! | AGCTGAAATTCTGGGAGCAC+AGG | + | chr2.4:7179878-7179897 | MS.gene31234:CDS | 50.0% |
| ! | CGCTTCATCGAAAAAGGCGT+CGG | + | chr2.4:7178136-7178155 | MS.gene31234:CDS | 50.0% |
| ! | GAATGAATGGGATGGTGGCA+TGG | + | chr2.4:7181811-7181830 | MS.gene31234:CDS | 50.0% |
| ! | GCGGTGGATAGTGTTGCTAA+CGG | + | chr2.4:7178164-7178183 | MS.gene31234:CDS | 50.0% |
| ! | GGTCTGGAATAGGAAGCTCA+CGG | - | chr2.4:7179755-7179774 | None:intergenic | 50.0% |
| ! | TTTGGAAGCATGTGTGTGGC+TGG | + | chr2.4:7180920-7180939 | MS.gene31234:CDS | 50.0% |
| !! | ATCGAAAAAGGCGTCGGAGA+AGG | + | chr2.4:7178142-7178161 | MS.gene31234:CDS | 50.0% |
| !! | GACAATTGACTCGTTAGCCG+AGG | + | chr2.4:7181784-7181803 | MS.gene31234:CDS | 50.0% |
| !!! | CGACGCCTTTTTCGATGAAG+CGG | - | chr2.4:7178138-7178157 | None:intergenic | 50.0% |
| !!! | CTTTTTCGATGAAGCGGTGG+CGG | - | chr2.4:7178132-7178151 | None:intergenic | 50.0% |
| ACCAGCCCAACTGCTTGACT+AGG | - | chr2.4:7179301-7179320 | None:intergenic | 55.0% | |
| ACCTAGTCAAGCAGTTGGGC+TGG | + | chr2.4:7179297-7179316 | MS.gene31234:intron | 55.0% | |
| AGCCTCTGACATGTCTGCGT+TGG | + | chr2.4:7179809-7179828 | MS.gene31234:CDS | 55.0% | |
| CCCACCTGTACTGCTTCATC+TGG | - | chr2.4:7181112-7181131 | None:intergenic | 55.0% | |
| CCCACCTGTTCTCCAGTTTG+TGG | + | chr2.4:7181316-7181335 | MS.gene31234:CDS | 55.0% | |
| CGCCACCGCTTCATCGAAAA+AGG | + | chr2.4:7178130-7178149 | MS.gene31234:CDS | 55.0% | |
| CTCCAACGCAGACATGTCAG+AGG | - | chr2.4:7179814-7179833 | None:intergenic | 55.0% | |
| CTCTGACATGTCTGCGTTGG+AGG | + | chr2.4:7179812-7179831 | MS.gene31234:CDS | 55.0% | |
| CTTCCCTCCTCTCTTTGCAG+CGG | - | chr2.4:7178105-7178124 | None:intergenic | 55.0% | |
| CTTGCAAAAATGGAGCGCGG+TGG | + | chr2.4:7181227-7181246 | MS.gene31234:CDS | 55.0% | |
| GACTCCAGGATTGCTCTGGT+TGG | + | chr2.4:7181404-7181423 | MS.gene31234:CDS | 55.0% | |
| GGAGTCGCGTGATCTTTGCA+TGG | + | chr2.4:7181699-7181718 | MS.gene31234:CDS | 55.0% | |
| GTGCTCTTCCCAGCTCCATT+GGG | - | chr2.4:7181431-7181450 | None:intergenic | 55.0% | |
| TGGTTGGACCCAATGGAGCT+GGG | + | chr2.4:7181420-7181439 | MS.gene31234:CDS | 55.0% | |
| TTCGGGGAAGAGGGATACCA+AGG | - | chr2.4:7180224-7180243 | None:intergenic | 55.0% | |
| ! | ATGGGATGGTGGCATGGTTC+TGG | + | chr2.4:7181817-7181836 | MS.gene31234:CDS | 55.0% |
| ! | ATGTTCCAGGAGGATGGTGG+TGG | + | chr2.4:7179982-7180001 | MS.gene31234:intron | 55.0% |
| ! | CGGTGGACTTACAGAGAAGG+TGG | + | chr2.4:7181244-7181263 | MS.gene31234:CDS | 55.0% |
| ! | TCGGGGTCGATTTAGACTCC+AGG | + | chr2.4:7181390-7181409 | MS.gene31234:CDS | 55.0% |
| !! | AGCAGTTGGGCTGGTAGCAA+TGG | + | chr2.4:7179306-7179325 | MS.gene31234:intron | 55.0% |
| !! | GAAAAAGGCGTCGGAGAAGG+CGG | + | chr2.4:7178145-7178164 | MS.gene31234:CDS | 55.0% |
| !!! | CGCCTTTTTCGATGAAGCGG+TGG | - | chr2.4:7178135-7178154 | None:intergenic | 55.0% |
| CGCTGCAAAGAGAGGAGGGA+AGG | + | chr2.4:7178103-7178122 | MS.gene31234:CDS | 60.0% | |
| CGTGCTCTTCCCAGCTCCAT+TGG | - | chr2.4:7181432-7181451 | None:intergenic | 60.0% | |
| CTGGTTGGACCCAATGGAGC+TGG | + | chr2.4:7181419-7181438 | MS.gene31234:CDS | 60.0% | |
| CTTCACCACCACCATCCTCC+TGG | - | chr2.4:7179990-7180009 | None:intergenic | 60.0% | |
| GAAGCAGTACAGGTGGGAGC+AGG | + | chr2.4:7181115-7181134 | MS.gene31234:CDS | 60.0% | |
| GGGTCCAACCAGAGCAATCC+TGG | - | chr2.4:7181411-7181430 | None:intergenic | 60.0% | |
| ! | GCGCGGTGGACTTACAGAGA+AGG | + | chr2.4:7181241-7181260 | MS.gene31234:CDS | 60.0% |
| ! | GGAAGCATGTGTGTGGCTGG+AGG | + | chr2.4:7180923-7180942 | MS.gene31234:CDS | 60.0% |
| CCCTCCTCTCTTTGCAGCGG+CGG | - | chr2.4:7178102-7178121 | None:intergenic | 65.0% | |
| CCGCCGCTGCAAAGAGAGGA+GGG | + | chr2.4:7178099-7178118 | MS.gene31234:CDS | 65.0% | |
| !! | AAAGGCGTCGGAGAAGGCGG+TGG | + | chr2.4:7178148-7178167 | MS.gene31234:CDS | 65.0% |
| GCCGCCGCTGCAAAGAGAGG+AGG | + | chr2.4:7178098-7178117 | MS.gene31234:CDS | 70.0% | |
| GCTGCCGCCGCTGCAAAGAG+AGG | + | chr2.4:7178095-7178114 | MS.gene31234:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 7178053 | 7181976 | 7178053 | ID=MS.gene31234 |
| chr2.4 | mRNA | 7178053 | 7181976 | 7178053 | ID=MS.gene31234.t1;Parent=MS.gene31234 |
| chr2.4 | exon | 7178053 | 7178262 | 7178053 | ID=MS.gene31234.t1.exon1;Parent=MS.gene31234.t1 |
| chr2.4 | CDS | 7178053 | 7178262 | 7178053 | ID=cds.MS.gene31234.t1;Parent=MS.gene31234.t1 |
| chr2.4 | exon | 7179508 | 7179581 | 7179508 | ID=MS.gene31234.t1.exon2;Parent=MS.gene31234.t1 |
| chr2.4 | CDS | 7179508 | 7179581 | 7179508 | ID=cds.MS.gene31234.t1;Parent=MS.gene31234.t1 |
| chr2.4 | exon | 7179689 | 7179899 | 7179689 | ID=MS.gene31234.t1.exon3;Parent=MS.gene31234.t1 |
| chr2.4 | CDS | 7179689 | 7179899 | 7179689 | ID=cds.MS.gene31234.t1;Parent=MS.gene31234.t1 |
| chr2.4 | exon | 7179991 | 7180225 | 7179991 | ID=MS.gene31234.t1.exon4;Parent=MS.gene31234.t1 |
| chr2.4 | CDS | 7179991 | 7180225 | 7179991 | ID=cds.MS.gene31234.t1;Parent=MS.gene31234.t1 |
| chr2.4 | exon | 7180919 | 7181976 | 7180919 | ID=MS.gene31234.t1.exon5;Parent=MS.gene31234.t1 |
| chr2.4 | CDS | 7180919 | 7181976 | 7180919 | ID=cds.MS.gene31234.t1;Parent=MS.gene31234.t1 |
| Gene Sequence |
| Protein sequence |
