Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044268.t1 | XP_003601462.1 | 99.6 | 713 | 3 | 0 | 1 | 713 | 1 | 713 | 0.00E+00 | 1406.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044268.t1 | Q8H0V6 | 83.2 | 714 | 119 | 1 | 1 | 713 | 1 | 714 | 0.0e+00 | 1202.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044268.t1 | G7J816 | 99.6 | 713 | 3 | 0 | 1 | 713 | 1 | 713 | 0.0e+00 | 1406.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene31234 | MS.gene044268 | PPI |
| MS.gene60123 | MS.gene044268 | PPI |
| MS.gene65733 | MS.gene044268 | PPI |
| MS.gene028666 | MS.gene044268 | PPI |
| MS.gene28880 | MS.gene044268 | PPI |
| MS.gene050582 | MS.gene044268 | PPI |
| MS.gene044268 | MS.gene44209 | PPI |
| MS.gene046194 | MS.gene044268 | PPI |
| MS.gene039653 | MS.gene044268 | PPI |
| MS.gene044268 | MS.gene30914 | PPI |
| MS.gene044268 | MS.gene012143 | PPI |
| MS.gene029857 | MS.gene044268 | PPI |
| MS.gene044268 | MS.gene024505 | PPI |
| MS.gene044268 | MS.gene24579 | PPI |
| MS.gene22858 | MS.gene044268 | PPI |
| MS.gene044268 | MS.gene039654 | PPI |
| MS.gene044268 | MS.gene016605 | PPI |
| MS.gene92023 | MS.gene044268 | PPI |
| MS.gene073773 | MS.gene044268 | PPI |
| MS.gene017600 | MS.gene044268 | PPI |
| MS.gene44789 | MS.gene044268 | PPI |
| MS.gene044268 | MS.gene050086 | PPI |
| MS.gene022057 | MS.gene044268 | PPI |
| MS.gene025968 | MS.gene044268 | PPI |
| MS.gene044268 | MS.gene056232 | PPI |
| MS.gene88497 | MS.gene044268 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044268.t1 | MTR_3g080970 | 99.579 | 713 | 3 | 0 | 1 | 713 | 1 | 713 | 0.0 | 1464 |
| MS.gene044268.t1 | MTR_4g057795 | 43.934 | 544 | 280 | 7 | 173 | 712 | 62 | 584 | 1.90e-155 | 463 |
| MS.gene044268.t1 | MTR_2g095440 | 43.043 | 539 | 282 | 7 | 173 | 707 | 62 | 579 | 2.97e-152 | 455 |
| MS.gene044268.t1 | MTR_2g095440 | 42.831 | 537 | 282 | 7 | 175 | 707 | 4 | 519 | 1.86e-151 | 451 |
| MS.gene044268.t1 | MTR_2g095440 | 42.991 | 535 | 280 | 7 | 177 | 707 | 12 | 525 | 5.20e-151 | 450 |
| MS.gene044268.t1 | MTR_7g018380 | 41.696 | 578 | 307 | 9 | 156 | 710 | 135 | 705 | 1.46e-150 | 455 |
| MS.gene044268.t1 | MTR_8g075040 | 41.897 | 580 | 309 | 10 | 152 | 710 | 184 | 756 | 1.46e-148 | 451 |
| MS.gene044268.t1 | MTR_1g066620 | 43.806 | 557 | 283 | 13 | 177 | 710 | 2 | 551 | 1.70e-148 | 444 |
| MS.gene044268.t1 | MTR_4g057795 | 44.376 | 489 | 248 | 6 | 228 | 712 | 6 | 474 | 6.41e-139 | 417 |
| MS.gene044268.t1 | MTR_3g095010 | 28.649 | 555 | 367 | 10 | 166 | 706 | 97 | 636 | 4.23e-59 | 212 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044268.t1 | AT1G64550 | 83.193 | 714 | 119 | 1 | 1 | 713 | 1 | 714 | 0.0 | 1254 |
| MS.gene044268.t1 | AT3G54540 | 41.483 | 634 | 316 | 14 | 123 | 711 | 91 | 714 | 1.39e-155 | 468 |
| MS.gene044268.t1 | AT3G54540 | 41.483 | 634 | 316 | 14 | 123 | 711 | 91 | 714 | 1.39e-155 | 468 |
| MS.gene044268.t1 | AT5G60790 | 42.647 | 544 | 287 | 6 | 173 | 712 | 67 | 589 | 1.24e-152 | 456 |
| MS.gene044268.t1 | AT5G64840 | 28.727 | 550 | 355 | 10 | 175 | 706 | 98 | 628 | 2.94e-63 | 224 |
| MS.gene044268.t1 | AT5G09930 | 27.145 | 571 | 386 | 12 | 148 | 703 | 56 | 611 | 7.08e-59 | 211 |
| MS.gene044268.t1 | AT5G09930 | 32.692 | 104 | 70 | 0 | 320 | 423 | 511 | 614 | 6.32e-12 | 69.3 |
| MS.gene044268.t1 | AT4G33460 | 32.394 | 142 | 90 | 3 | 516 | 653 | 58 | 197 | 1.34e-11 | 66.2 |
Find 183 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCAAACGGAGCGGCATTC+AGG | 0.223394 | 3.3:-68575316 | None:intergenic |
| GCGCACCAATTATAAGTTTC+AGG | 0.227149 | 3.3:+68581913 | MS.gene044268:CDS |
| CTGGAGGGCCCATTCTATTT+AGG | 0.229690 | 3.3:+68582100 | MS.gene044268:CDS |
| TTGAATCATACTTGGTTAAA+TGG | 0.234380 | 3.3:+68579384 | MS.gene044268:CDS |
| CGAGGTCACTTGGGTTCTTT+TGG | 0.235399 | 3.3:+68583536 | MS.gene044268:CDS |
| TTCTACCTGAAACTTATAAT+TGG | 0.273984 | 3.3:-68581918 | None:intergenic |
| CATTGAGAGAGCCCAGCTTC+TGG | 0.284632 | 3.3:+68578603 | MS.gene044268:CDS |
| TTGATCTCCATGCCGTCTTA+TGG | 0.292656 | 3.3:+68579360 | MS.gene044268:CDS |
| AGCAAACTTTCGGATAAGTT+TGG | 0.323532 | 3.3:+68575337 | MS.gene044268:CDS |
| TATTTAGGAATTTGAACTTT+GGG | 0.326994 | 3.3:+68582115 | MS.gene044268:CDS |
| GGTTCTGTTACGCTCTCTTT+TGG | 0.327023 | 3.3:+68577832 | MS.gene044268:CDS |
| GTGTAATATTTGACAATTCC+TGG | 0.335856 | 3.3:-68578521 | None:intergenic |
| ACCGGCTCCGGTTTCTTCTT+CGG | 0.337080 | 3.3:-68575448 | None:intergenic |
| GAAGATATTACACTCATCTT+AGG | 0.341513 | 3.3:+68585228 | MS.gene044268:CDS |
| CTCCGTTTGCAGCAAACTTT+CGG | 0.342316 | 3.3:+68575327 | MS.gene044268:CDS |
| TTAACGATGTAACTTACTAT+TGG | 0.347119 | 3.3:-68575193 | None:intergenic |
| TGAGATTTAGAACCTCTCTT+TGG | 0.359474 | 3.3:-68575537 | None:intergenic |
| GGGGAACTACAGCCAAGTTC+TGG | 0.367827 | 3.3:+68582468 | MS.gene044268:CDS |
| TCAGTAGTTCACGAGGTTAT+AGG | 0.367986 | 3.3:+68575145 | MS.gene044268:CDS |
| ATTCCTGGGAATGCCGTCTA+TGG | 0.376767 | 3.3:-68578506 | None:intergenic |
| AGCTCATTTAATAGCCAAAC+AGG | 0.379561 | 3.3:+68578633 | MS.gene044268:CDS |
| CACGATGAGCATCTCATCTC+TGG | 0.391097 | 3.3:+68585133 | MS.gene044268:CDS |
| ACTATACTTAAGTTAATTGC+TGG | 0.394054 | 3.3:+68582447 | MS.gene044268:CDS |
| GTTGCCTTCTTCTGCATCTC+AGG | 0.394494 | 3.3:-68579150 | None:intergenic |
| CTATTTAGGAATTTGAACTT+TGG | 0.399684 | 3.3:+68582114 | MS.gene044268:CDS |
| CTTATGGCTTGAATCATACT+TGG | 0.400266 | 3.3:+68579376 | MS.gene044268:CDS |
| GCTGTTGAGGCGCTGATTCA+AGG | 0.402591 | 3.3:+68584961 | MS.gene044268:CDS |
| GCAAACTTTCGGATAAGTTT+GGG | 0.402709 | 3.3:+68575338 | MS.gene044268:CDS |
| GGTCATGATCTCATTCTTGA+TGG | 0.405003 | 3.3:+68577811 | MS.gene044268:CDS |
| ACAAGGGCACTGATGCGAAC+GGG | 0.405045 | 3.3:+68578849 | MS.gene044268:CDS |
| CCAATTGCATTTGGCGGAGA+TGG | 0.405699 | 3.3:+68577684 | MS.gene044268:CDS |
| GTTTCGGATGAATGAGGGTT+TGG | 0.410635 | 3.3:+68575411 | MS.gene044268:CDS |
| TTCAGTCAGCACCATGTTGA+TGG | 0.411812 | 3.3:+68582953 | MS.gene044268:CDS |
| TCATCAAGAAGCAACATATC+AGG | 0.412688 | 3.3:-68579234 | None:intergenic |
| GAGCTTCTTCCTCCAGAAGC+TGG | 0.414736 | 3.3:-68578615 | None:intergenic |
| GGAGATCTCCTCGTCGCCGC+TGG | 0.415089 | 3.3:+68575277 | MS.gene044268:CDS |
| GTTCAAATTCCTAAATAGAA+TGG | 0.416086 | 3.3:-68582109 | None:intergenic |
| GGAGCGGCATTCAGGGAAAT+CGG | 0.420688 | 3.3:-68575308 | None:intergenic |
| GGCGAAGTACCAATTGCATT+TGG | 0.422768 | 3.3:+68577675 | MS.gene044268:intron |
| GTAGATTTACCGATACCATT+TGG | 0.424990 | 3.3:-68582426 | None:intergenic |
| CTGTGCAGTGATGCATCATT+TGG | 0.425194 | 3.3:+68582072 | MS.gene044268:intron |
| CAACCCATGTACACTTTGTC+AGG | 0.431364 | 3.3:+68583581 | MS.gene044268:CDS |
| GAAGCCTTGCAGCACCGTTT+CGG | 0.435696 | 3.3:+68575395 | MS.gene044268:CDS |
| GAGATGGAAGCGGTGAGAGC+AGG | 0.443078 | 3.3:+68577700 | MS.gene044268:CDS |
| ATCCGAAAGTTTGCTGCAAA+CGG | 0.444920 | 3.3:-68575329 | None:intergenic |
| TAAGTTTGGGAAGCATGGTT+TGG | 0.445253 | 3.3:+68575351 | MS.gene044268:CDS |
| AATCTCAACGCAGGGCTTGT+TGG | 0.446907 | 3.3:+68578433 | MS.gene044268:intron |
| TTCAAATTCCTAAATAGAAT+GGG | 0.447245 | 3.3:-68582108 | None:intergenic |
| ACGCCCTCTTGGCATTATAT+CGG | 0.448088 | 3.3:-68581508 | None:intergenic |
| GTTTCAGGCTCTGGATCGAC+TGG | 0.448248 | 3.3:+68581721 | MS.gene044268:intron |
| TGGAAAACTTACAAGATGAT+TGG | 0.451286 | 3.3:-68583774 | None:intergenic |
| AGCGGACCATCCACCGGCTC+CGG | 0.452908 | 3.3:-68575460 | None:intergenic |
| GCAGGGCTTGTTGGTAGAAA+CGG | 0.453343 | 3.3:+68578442 | MS.gene044268:intron |
| GAACAGCACACGAACCTGTT+TGG | 0.453729 | 3.3:-68578647 | None:intergenic |
| CCATCTCCGCCAAATGCAAT+TGG | 0.455176 | 3.3:-68577684 | None:intergenic |
| CGGAAGACAGTTCCAGAACT+TGG | 0.459759 | 3.3:-68582480 | None:intergenic |
| TGCAAACGGAGCGGCATTCA+GGG | 0.460739 | 3.3:-68575315 | None:intergenic |
| CTAAATAGAATGGGCCCTCC+AGG | 0.462066 | 3.3:-68582099 | None:intergenic |
| AGATAGTGAAATTATCCATA+TGG | 0.465348 | 3.3:-68577780 | None:intergenic |
| CACTGTGAAGGATATCCATA+TGG | 0.468849 | 3.3:+68577765 | MS.gene044268:CDS |
| TGAAGATTGAAAGGAGGAAG+AGG | 0.469188 | 3.3:+68575503 | MS.gene044268:CDS |
| GATAATTTCACTATCTCTGT+TGG | 0.470849 | 3.3:+68577787 | MS.gene044268:CDS |
| GGTGCGCCTGGTCTATCATC+TGG | 0.471714 | 3.3:-68581897 | None:intergenic |
| AGCTTCTTCCTCCAGAAGCT+GGG | 0.476084 | 3.3:-68578614 | None:intergenic |
| TCGTGCTTCACACACGCAAC+AGG | 0.477388 | 3.3:-68577727 | None:intergenic |
| CTGGAAGTGTGGAGGAGCTA+TGG | 0.480426 | 3.3:+68585152 | MS.gene044268:CDS |
| TTGAACAAGGGACGCCCTCT+TGG | 0.481635 | 3.3:-68581519 | None:intergenic |
| GATGCATCATTTGGTTATCC+TGG | 0.482876 | 3.3:+68582081 | MS.gene044268:CDS |
| CTATACTTAAGTTAATTGCT+GGG | 0.484866 | 3.3:+68582448 | MS.gene044268:CDS |
| CAGGGCTTGTTGGTAGAAAC+GGG | 0.486158 | 3.3:+68578443 | MS.gene044268:intron |
| CATATAAAGAAGAGGATTTG+AGG | 0.494310 | 3.3:-68582987 | None:intergenic |
| GCTGCAAGGCTTCTTACCGT+TGG | 0.494682 | 3.3:-68575385 | None:intergenic |
| CAAGGTCTTGTGTTATTCCA+AGG | 0.495588 | 3.3:+68584979 | MS.gene044268:CDS |
| TATACCTGACAAAGTGTACA+TGG | 0.498928 | 3.3:-68583585 | None:intergenic |
| TTTGCAGTGGTTGGACCAAA+TGG | 0.509188 | 3.3:+68582411 | MS.gene044268:intron |
| TGTAATATTTGACAATTCCT+GGG | 0.512737 | 3.3:-68578520 | None:intergenic |
| CCTGGTCTATCATCTGGAGT+GGG | 0.512756 | 3.3:-68581891 | None:intergenic |
| GAGCGGCATTCAGGGAAATC+GGG | 0.512789 | 3.3:-68575307 | None:intergenic |
| GCGTGTGTGAAGCACGAGGC+TGG | 0.512904 | 3.3:+68577733 | MS.gene044268:CDS |
| CTCTCCTGAGATGCAGAAGA+AGG | 0.514610 | 3.3:+68579146 | MS.gene044268:CDS |
| TGAAGCTCCGAAGAAGAAAC+CGG | 0.517022 | 3.3:+68575441 | MS.gene044268:CDS |
| AAACTTATAATTGGTGCGCC+TGG | 0.520729 | 3.3:-68581909 | None:intergenic |
| GCCGACGAGGATTTCGACTT+CGG | 0.522954 | 3.3:+68575223 | MS.gene044268:CDS |
| GACTTCGGCCTCGACGGCGA+AGG | 0.524522 | 3.3:+68575238 | MS.gene044268:CDS |
| CCTTGATTCTAGATTGAACA+AGG | 0.531578 | 3.3:-68581532 | None:intergenic |
| AGATGGAAGCGGTGAGAGCA+GGG | 0.532113 | 3.3:+68577701 | MS.gene044268:CDS |
| CTTAAAAGTTATCTTCGCAA+AGG | 0.533247 | 3.3:-68583720 | None:intergenic |
| TCGGATAAGTTTGGGAAGCA+TGG | 0.536309 | 3.3:+68575346 | MS.gene044268:CDS |
| GTGAAGCACGAGGCTGGTGG+TGG | 0.537830 | 3.3:+68577739 | MS.gene044268:CDS |
| CATCATTTGGTTATCCTGGA+GGG | 0.538782 | 3.3:+68582085 | MS.gene044268:CDS |
| TGGGAAGCATGGTTTGGTGA+AGG | 0.541915 | 3.3:+68575357 | MS.gene044268:CDS |
| ATACCATGAGAATGCCTCCT+TGG | 0.542842 | 3.3:-68584996 | None:intergenic |
| ATATCGGAACTTGTCAATGA+AGG | 0.546404 | 3.3:-68581492 | None:intergenic |
| CCTTGTTCAATCTAGAATCA+AGG | 0.547740 | 3.3:+68581532 | MS.gene044268:CDS |
| GCATTTGGCGGAGATGGAAG+CGG | 0.549745 | 3.3:+68577690 | MS.gene044268:CDS |
| ATGCCATAGACGGCATTCCC+AGG | 0.550487 | 3.3:+68578503 | MS.gene044268:CDS |
| TCATCAAGCAATATTATATG+TGG | 0.550810 | 3.3:-68583746 | None:intergenic |
| GTTGCTTCTTGATGAGCCTA+CGG | 0.554646 | 3.3:+68579242 | MS.gene044268:CDS |
| GCGATAAGTTGAAGATTGAA+AGG | 0.557317 | 3.3:+68575494 | MS.gene044268:CDS |
| GATGCGAACGGGGCAGTGAA+AGG | 0.557433 | 3.3:+68578860 | MS.gene044268:CDS |
| AATTTCACTATCTCTGTTGG+TGG | 0.557567 | 3.3:+68577790 | MS.gene044268:CDS |
| TATACTCAGCGAAGGTGCCA+TGG | 0.559357 | 3.3:-68585204 | None:intergenic |
| AAACCCTCATTCATCCGAAA+CGG | 0.559447 | 3.3:-68575409 | None:intergenic |
| GACAAGGGCACTGATGCGAA+CGG | 0.560701 | 3.3:+68578848 | MS.gene044268:CDS |
| GATTTCGACTTCGGCCTCGA+CGG | 0.563886 | 3.3:+68575232 | MS.gene044268:CDS |
| AAACTTACAAGATGATTGGA+TGG | 0.564229 | 3.3:-68583770 | None:intergenic |
| TATAAATTACCTTGGCAGAA+CGG | 0.565102 | 3.3:-68582500 | None:intergenic |
| AGCACCGTTTCGGATGAATG+AGG | 0.566933 | 3.3:+68575405 | MS.gene044268:CDS |
| TCCGAAGAAGAAACCGGAGC+CGG | 0.567539 | 3.3:+68575447 | MS.gene044268:CDS |
| CCCACTCCAGATGATAGACC+AGG | 0.568463 | 3.3:+68581891 | MS.gene044268:CDS |
| TCAGCGAAGGTGCCATGGAA+TGG | 0.568500 | 3.3:-68585199 | None:intergenic |
| CAACGCATCATATAAAGAAG+AGG | 0.568867 | 3.3:-68582995 | None:intergenic |
| GAATGGTGCCACTCTACCCT+CGG | 0.569604 | 3.3:-68585182 | None:intergenic |
| GAAGGTGCTTTCGATGCCCT+CGG | 0.569894 | 3.3:+68575256 | MS.gene044268:CDS |
| AAGAAACCGGAGCCGGTGGA+TGG | 0.570965 | 3.3:+68575454 | MS.gene044268:CDS |
| GCACCGTTTCGGATGAATGA+GGG | 0.573232 | 3.3:+68575406 | MS.gene044268:CDS |
| GCGTTCAAGAGCTCATATGC+AGG | 0.575845 | 3.3:+68579689 | MS.gene044268:CDS |
| GCATCATTTGGTTATCCTGG+AGG | 0.576224 | 3.3:+68582084 | MS.gene044268:CDS |
| GGTAGAGTGGCACCATTCCA+TGG | 0.577765 | 3.3:+68585187 | MS.gene044268:CDS |
| AACTGTCTTCCGTTCTGCCA+AGG | 0.579369 | 3.3:+68582491 | MS.gene044268:CDS |
| CACGTTGAGCAAGAAGTCGT+TGG | 0.580243 | 3.3:+68578541 | MS.gene044268:CDS |
| GTGGTTGGACCAAATGGTAT+CGG | 0.580615 | 3.3:+68582417 | MS.gene044268:intron |
| GAAGTACCAATTGCATTTGG+CGG | 0.583190 | 3.3:+68577678 | MS.gene044268:CDS |
| GACAAAAGCGGACCATCCAC+CGG | 0.588243 | 3.3:-68575466 | None:intergenic |
| CAAGGGCACTGATGCGAACG+GGG | 0.588851 | 3.3:+68578850 | MS.gene044268:CDS |
| GCCTGGTCTATCATCTGGAG+TGG | 0.590672 | 3.3:-68581892 | None:intergenic |
| GAAAGATGAACGCCAAAGAG+AGG | 0.591817 | 3.3:+68575525 | MS.gene044268:CDS |
| CATTAATAATTGCATCAACA+TGG | 0.594015 | 3.3:-68581745 | None:intergenic |
| GTAGGACTTGGATGCTGTTG+AGG | 0.594285 | 3.3:+68584948 | MS.gene044268:intron |
| AGTATTAAGAACACACTGCA+AGG | 0.599569 | 3.3:-68578578 | None:intergenic |
| GCATCTCATCTCTGGAAGTG+TGG | 0.601929 | 3.3:+68585141 | MS.gene044268:CDS |
| CGAAAGCACCTTCGCCGTCG+AGG | 0.604583 | 3.3:-68575246 | None:intergenic |
| GATTGTATCCGAGGGTAGAG+TGG | 0.606856 | 3.3:+68585174 | MS.gene044268:CDS |
| AATGCCGTCTATGGCATGCA+TGG | 0.608499 | 3.3:-68578497 | None:intergenic |
| ATGAATGAGGGTTTGGATGA+CGG | 0.609893 | 3.3:+68575418 | MS.gene044268:CDS |
| AACAACCTTCTTGAGGCACA+TGG | 0.610321 | 3.3:+68578474 | MS.gene044268:CDS |
| ATTCAAGCCATAAGACGGCA+TGG | 0.612908 | 3.3:-68579367 | None:intergenic |
| GGAGCTATGGATTGTATCCG+AGG | 0.613164 | 3.3:+68585165 | MS.gene044268:CDS |
| TCATCCGAAACGGTGCTGCA+AGG | 0.615311 | 3.3:-68575399 | None:intergenic |
| GAAGAAGAAACCGGAGCCGG+TGG | 0.615475 | 3.3:+68575450 | MS.gene044268:CDS |
| ATTCCAAGGAGGCATTCTCA+TGG | 0.616346 | 3.3:+68584993 | MS.gene044268:CDS |
| ATCTGAGGACAGTACTGACA+AGG | 0.616605 | 3.3:+68578832 | MS.gene044268:CDS |
| CTTGTTGGTAGAAACGGGAC+GGG | 0.619268 | 3.3:+68578448 | MS.gene044268:CDS |
| GTTCCGATATAATGCCAAGA+GGG | 0.619421 | 3.3:+68581505 | MS.gene044268:CDS |
| GTATGATTCAAGCCATAAGA+CGG | 0.619514 | 3.3:-68579372 | None:intergenic |
| AGACGGCATGGAGATCAAGA+TGG | 0.621817 | 3.3:-68579355 | None:intergenic |
| ATGGCCATGCATGCCATAGA+CGG | 0.621836 | 3.3:+68578493 | MS.gene044268:CDS |
| GAACGCATCCAGCGGCGACG+AGG | 0.624290 | 3.3:-68575285 | None:intergenic |
| TATACTTAAGTTAATTGCTG+GGG | 0.624643 | 3.3:+68582449 | MS.gene044268:CDS |
| CATGGCCATGTGCCTCAAGA+AGG | 0.629295 | 3.3:-68578479 | None:intergenic |
| GGCGACGAGGAGATCTCCGA+GGG | 0.631024 | 3.3:-68575272 | None:intergenic |
| TTTCAGGCTCTGGATCGACT+GGG | 0.640002 | 3.3:+68581722 | MS.gene044268:intron |
| GGCTTGAGCAAATATACAAG+AGG | 0.640033 | 3.3:+68578900 | MS.gene044268:CDS |
| GCTTGTTGGTAGAAACGGGA+CGG | 0.640562 | 3.3:+68578447 | MS.gene044268:CDS |
| TCTCATCTCTGGAAGTGTGG+AGG | 0.644641 | 3.3:+68585144 | MS.gene044268:CDS |
| CTGGTCTATCATCTGGAGTG+GGG | 0.646160 | 3.3:-68581890 | None:intergenic |
| ATAAGTTGAAGATTGAAAGG+AGG | 0.647143 | 3.3:+68575497 | MS.gene044268:CDS |
| TATCTTCTTATACTCAGCGA+AGG | 0.649071 | 3.3:-68585212 | None:intergenic |
| TGAGAGAGCCCAGCTTCTGG+AGG | 0.650248 | 3.3:+68578606 | MS.gene044268:CDS |
| ACGAGCAGCGTCCATACTTG+CGG | 0.653892 | 3.3:+68578955 | MS.gene044268:CDS |
| TTTGGTGAAGGCGAAACCAA+CGG | 0.658701 | 3.3:+68575369 | MS.gene044268:CDS |
| GCCGAAGTCGAAATCCTCGT+CGG | 0.662237 | 3.3:-68575224 | None:intergenic |
| AGTCGAAATCCTCGTCGGCG+AGG | 0.663263 | 3.3:-68575219 | None:intergenic |
| GAAATCGGGAACGCATCCAG+CGG | 0.668511 | 3.3:-68575293 | None:intergenic |
| TGTCTGTTAGAGGGAATCTG+AGG | 0.669440 | 3.3:+68578817 | MS.gene044268:intron |
| TGGTGGTGGTCACACTGTGA+AGG | 0.671121 | 3.3:+68577753 | MS.gene044268:CDS |
| GAAGCTGAAGATGACAGAGG+TGG | 0.678417 | 3.3:+68575117 | None:intergenic |
| CGTTAACGTCCTCGCCGACG+AGG | 0.679637 | 3.3:+68575210 | MS.gene044268:CDS |
| TGTGTGAAGCACGAGGCTGG+TGG | 0.684119 | 3.3:+68577736 | MS.gene044268:CDS |
| AAAGTTTGCTGCAAACGGAG+CGG | 0.685855 | 3.3:-68575324 | None:intergenic |
| GAGCTATGGATTGTATCCGA+GGG | 0.688117 | 3.3:+68585166 | MS.gene044268:CDS |
| AAGGAGATGCTATTTCACAA+AGG | 0.688418 | 3.3:+68578879 | MS.gene044268:CDS |
| ATACCTGACAAAGTGTACAT+GGG | 0.689854 | 3.3:-68583584 | None:intergenic |
| GTTGAAGCTGAAGATGACAG+AGG | 0.696326 | 3.3:+68575114 | None:intergenic |
| ATAAGTCAAGTCCATCAACA+TGG | 0.704139 | 3.3:-68582964 | None:intergenic |
| GGTCTTGTGTTATTCCAAGG+AGG | 0.704483 | 3.3:+68584982 | MS.gene044268:CDS |
| TTATCGCGTTCAGACAAAAG+CGG | 0.705329 | 3.3:-68575478 | None:intergenic |
| GGCGAGATCAGTAGTTCACG+AGG | 0.707353 | 3.3:+68575138 | MS.gene044268:CDS |
| CTTGATTCTAGATTGAACAA+GGG | 0.709521 | 3.3:-68581531 | None:intergenic |
| TGTTGCGTGTGTGAAGCACG+AGG | 0.713473 | 3.3:+68577729 | MS.gene044268:CDS |
| TCTGAGGACAGTACTGACAA+GGG | 0.720650 | 3.3:+68578833 | MS.gene044268:CDS |
| AGTTCCGATATAATGCCAAG+AGG | 0.723283 | 3.3:+68581504 | MS.gene044268:CDS |
| CGGCGACGAGGAGATCTCCG+AGG | 0.727911 | 3.3:-68575273 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 68575127 | 68585249 | 68575127 | ID=MS.gene044268 |
| chr3.3 | mRNA | 68575127 | 68585249 | 68575127 | ID=MS.gene044268.t1;Parent=MS.gene044268 |
| chr3.3 | exon | 68575127 | 68575546 | 68575127 | ID=MS.gene044268.t1.exon1;Parent=MS.gene044268.t1 |
| chr3.3 | CDS | 68575127 | 68575546 | 68575127 | ID=cds.MS.gene044268.t1;Parent=MS.gene044268.t1 |
| chr3.3 | exon | 68577676 | 68577865 | 68577676 | ID=MS.gene044268.t1.exon2;Parent=MS.gene044268.t1 |
| chr3.3 | CDS | 68577676 | 68577865 | 68577676 | ID=cds.MS.gene044268.t1;Parent=MS.gene044268.t1 |
| chr3.3 | exon | 68578446 | 68578654 | 68578446 | ID=MS.gene044268.t1.exon3;Parent=MS.gene044268.t1 |
| chr3.3 | CDS | 68578446 | 68578654 | 68578446 | ID=cds.MS.gene044268.t1;Parent=MS.gene044268.t1 |
| chr3.3 | exon | 68578827 | 68578976 | 68578827 | ID=MS.gene044268.t1.exon4;Parent=MS.gene044268.t1 |
| chr3.3 | CDS | 68578827 | 68578976 | 68578827 | ID=cds.MS.gene044268.t1;Parent=MS.gene044268.t1 |
| chr3.3 | exon | 68579135 | 68579263 | 68579135 | ID=MS.gene044268.t1.exon5;Parent=MS.gene044268.t1 |
| chr3.3 | CDS | 68579135 | 68579263 | 68579135 | ID=cds.MS.gene044268.t1;Parent=MS.gene044268.t1 |
| chr3.3 | exon | 68579353 | 68579454 | 68579353 | ID=MS.gene044268.t1.exon6;Parent=MS.gene044268.t1 |
| chr3.3 | CDS | 68579353 | 68579454 | 68579353 | ID=cds.MS.gene044268.t1;Parent=MS.gene044268.t1 |
| chr3.3 | exon | 68579564 | 68579710 | 68579564 | ID=MS.gene044268.t1.exon7;Parent=MS.gene044268.t1 |
| chr3.3 | CDS | 68579564 | 68579710 | 68579564 | ID=cds.MS.gene044268.t1;Parent=MS.gene044268.t1 |
| chr3.3 | exon | 68581491 | 68581553 | 68581491 | ID=MS.gene044268.t1.exon8;Parent=MS.gene044268.t1 |
| chr3.3 | CDS | 68581491 | 68581553 | 68581491 | ID=cds.MS.gene044268.t1;Parent=MS.gene044268.t1 |
| chr3.3 | exon | 68581728 | 68581774 | 68581728 | ID=MS.gene044268.t1.exon9;Parent=MS.gene044268.t1 |
| chr3.3 | CDS | 68581728 | 68581774 | 68581728 | ID=cds.MS.gene044268.t1;Parent=MS.gene044268.t1 |
| chr3.3 | exon | 68581875 | 68581934 | 68581875 | ID=MS.gene044268.t1.exon10;Parent=MS.gene044268.t1 |
| chr3.3 | CDS | 68581875 | 68581934 | 68581875 | ID=cds.MS.gene044268.t1;Parent=MS.gene044268.t1 |
| chr3.3 | exon | 68582080 | 68582162 | 68582080 | ID=MS.gene044268.t1.exon11;Parent=MS.gene044268.t1 |
| chr3.3 | CDS | 68582080 | 68582162 | 68582080 | ID=cds.MS.gene044268.t1;Parent=MS.gene044268.t1 |
| chr3.3 | exon | 68582418 | 68582512 | 68582418 | ID=MS.gene044268.t1.exon12;Parent=MS.gene044268.t1 |
| chr3.3 | CDS | 68582418 | 68582512 | 68582418 | ID=cds.MS.gene044268.t1;Parent=MS.gene044268.t1 |
| chr3.3 | exon | 68582938 | 68583024 | 68582938 | ID=MS.gene044268.t1.exon13;Parent=MS.gene044268.t1 |
| chr3.3 | CDS | 68582938 | 68583024 | 68582938 | ID=cds.MS.gene044268.t1;Parent=MS.gene044268.t1 |
| chr3.3 | exon | 68583515 | 68583602 | 68583515 | ID=MS.gene044268.t1.exon14;Parent=MS.gene044268.t1 |
| chr3.3 | CDS | 68583515 | 68583602 | 68583515 | ID=cds.MS.gene044268.t1;Parent=MS.gene044268.t1 |
| chr3.3 | exon | 68583699 | 68583784 | 68583699 | ID=MS.gene044268.t1.exon15;Parent=MS.gene044268.t1 |
| chr3.3 | CDS | 68583699 | 68583784 | 68583699 | ID=cds.MS.gene044268.t1;Parent=MS.gene044268.t1 |
| chr3.3 | exon | 68584952 | 68585014 | 68584952 | ID=MS.gene044268.t1.exon16;Parent=MS.gene044268.t1 |
| chr3.3 | CDS | 68584952 | 68585014 | 68584952 | ID=cds.MS.gene044268.t1;Parent=MS.gene044268.t1 |
| chr3.3 | exon | 68585127 | 68585249 | 68585127 | ID=MS.gene044268.t1.exon17;Parent=MS.gene044268.t1 |
| chr3.3 | CDS | 68585127 | 68585249 | 68585127 | ID=cds.MS.gene044268.t1;Parent=MS.gene044268.t1 |
| Gene Sequence |
| Protein sequence |
