Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69745.t1 | XP_003601462.1 | 99.6 | 713 | 3 | 0 | 1 | 713 | 1 | 713 | 0.00E+00 | 1406.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69745.t1 | Q8H0V6 | 83.2 | 714 | 119 | 1 | 1 | 713 | 1 | 714 | 0.0e+00 | 1202.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69745.t1 | G7J816 | 99.6 | 713 | 3 | 0 | 1 | 713 | 1 | 713 | 0.0e+00 | 1406.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene029857 | MS.gene69745 | PPI |
| MS.gene69745 | MS.gene025968 | PPI |
| MS.gene69745 | MS.gene44209 | PPI |
| MS.gene050582 | MS.gene69745 | PPI |
| MS.gene046194 | MS.gene69745 | PPI |
| MS.gene039653 | MS.gene69745 | PPI |
| MS.gene69745 | MS.gene65733 | PPI |
| MS.gene69745 | MS.gene24579 | PPI |
| MS.gene69745 | MS.gene016605 | PPI |
| MS.gene69745 | MS.gene44789 | PPI |
| MS.gene22858 | MS.gene69745 | PPI |
| MS.gene92023 | MS.gene69745 | PPI |
| MS.gene69745 | MS.gene30914 | PPI |
| MS.gene69745 | MS.gene073773 | PPI |
| MS.gene017600 | MS.gene69745 | PPI |
| MS.gene69745 | MS.gene012143 | PPI |
| MS.gene69745 | MS.gene024505 | PPI |
| MS.gene69745 | MS.gene039654 | PPI |
| MS.gene022057 | MS.gene69745 | PPI |
| MS.gene69745 | MS.gene88497 | PPI |
| MS.gene31234 | MS.gene69745 | PPI |
| MS.gene60123 | MS.gene69745 | PPI |
| MS.gene69745 | MS.gene050086 | PPI |
| MS.gene69745 | MS.gene056232 | PPI |
| MS.gene69745 | MS.gene28880 | PPI |
| MS.gene028666 | MS.gene69745 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69745.t1 | MTR_3g080970 | 99.579 | 713 | 3 | 0 | 1 | 713 | 1 | 713 | 0.0 | 1464 |
| MS.gene69745.t1 | MTR_4g057795 | 43.934 | 544 | 280 | 7 | 173 | 712 | 62 | 584 | 1.90e-155 | 463 |
| MS.gene69745.t1 | MTR_2g095440 | 43.043 | 539 | 282 | 7 | 173 | 707 | 62 | 579 | 2.97e-152 | 455 |
| MS.gene69745.t1 | MTR_2g095440 | 42.831 | 537 | 282 | 7 | 175 | 707 | 4 | 519 | 1.86e-151 | 451 |
| MS.gene69745.t1 | MTR_2g095440 | 42.991 | 535 | 280 | 7 | 177 | 707 | 12 | 525 | 5.20e-151 | 450 |
| MS.gene69745.t1 | MTR_7g018380 | 41.696 | 578 | 307 | 9 | 156 | 710 | 135 | 705 | 1.46e-150 | 455 |
| MS.gene69745.t1 | MTR_8g075040 | 41.897 | 580 | 309 | 10 | 152 | 710 | 184 | 756 | 1.46e-148 | 451 |
| MS.gene69745.t1 | MTR_1g066620 | 43.806 | 557 | 283 | 13 | 177 | 710 | 2 | 551 | 1.70e-148 | 444 |
| MS.gene69745.t1 | MTR_4g057795 | 44.376 | 489 | 248 | 6 | 228 | 712 | 6 | 474 | 6.41e-139 | 417 |
| MS.gene69745.t1 | MTR_3g095010 | 28.649 | 555 | 367 | 10 | 166 | 706 | 97 | 636 | 4.23e-59 | 212 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69745.t1 | AT1G64550 | 83.193 | 714 | 119 | 1 | 1 | 713 | 1 | 714 | 0.0 | 1254 |
| MS.gene69745.t1 | AT3G54540 | 41.483 | 634 | 316 | 14 | 123 | 711 | 91 | 714 | 1.39e-155 | 468 |
| MS.gene69745.t1 | AT3G54540 | 41.483 | 634 | 316 | 14 | 123 | 711 | 91 | 714 | 1.39e-155 | 468 |
| MS.gene69745.t1 | AT5G60790 | 42.647 | 544 | 287 | 6 | 173 | 712 | 67 | 589 | 1.24e-152 | 456 |
| MS.gene69745.t1 | AT5G64840 | 28.727 | 550 | 355 | 10 | 175 | 706 | 98 | 628 | 2.94e-63 | 224 |
| MS.gene69745.t1 | AT5G09930 | 27.145 | 571 | 386 | 12 | 148 | 703 | 56 | 611 | 7.08e-59 | 211 |
| MS.gene69745.t1 | AT5G09930 | 32.692 | 104 | 70 | 0 | 320 | 423 | 511 | 614 | 6.32e-12 | 69.3 |
| MS.gene69745.t1 | AT4G33460 | 32.394 | 142 | 90 | 3 | 516 | 653 | 58 | 197 | 1.34e-11 | 66.2 |
Find 182 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCAAACGGAGCGGCATTC+AGG | 0.223394 | 3.4:-77052030 | None:intergenic |
| GCGCACCAATTATAAGTTTC+AGG | 0.227149 | 3.4:+77058675 | MS.gene69745:CDS |
| CTGGAGGGCCCATTCTATTT+AGG | 0.229690 | 3.4:+77058862 | MS.gene69745:CDS |
| TTGAATCATACTTGGTTAAA+TGG | 0.234380 | 3.4:+77056097 | MS.gene69745:CDS |
| CGAGGTCACTTGGGTTCTTT+TGG | 0.235399 | 3.4:+77060298 | MS.gene69745:CDS |
| TTCTACCTGAAACTTATAAT+TGG | 0.273984 | 3.4:-77058680 | None:intergenic |
| CATTGAGAGAGCCCAGCTTC+TGG | 0.284632 | 3.4:+77055316 | MS.gene69745:CDS |
| TTGATCTCCATGCCGTCTTA+TGG | 0.292656 | 3.4:+77056073 | MS.gene69745:CDS |
| AGCAAACTTTCGGATAAGTT+TGG | 0.323532 | 3.4:+77052051 | MS.gene69745:CDS |
| TATTTAGGAATTTGAACTTT+GGG | 0.326994 | 3.4:+77058877 | MS.gene69745:CDS |
| GGTTCTGTTACGCTCTCTTT+TGG | 0.327023 | 3.4:+77054545 | MS.gene69745:CDS |
| GTGTAATATTTGACAATTCC+TGG | 0.335856 | 3.4:-77055234 | None:intergenic |
| ACCGGCTCCGGTTTCTTCTT+CGG | 0.337080 | 3.4:-77052162 | None:intergenic |
| GAAGATATTACACTCATCTT+AGG | 0.341513 | 3.4:+77061987 | MS.gene69745:CDS |
| CTCCGTTTGCAGCAAACTTT+CGG | 0.342316 | 3.4:+77052041 | MS.gene69745:CDS |
| TTAACGATGTAACTTACTAT+TGG | 0.347119 | 3.4:-77051907 | None:intergenic |
| TGAGATTTAGAACCTCTCTT+TGG | 0.359474 | 3.4:-77052251 | None:intergenic |
| GGGGAACTACAGCCAAGTTC+TGG | 0.367827 | 3.4:+77059230 | MS.gene69745:CDS |
| TCAGTAGTTCACGAGGTTAT+AGG | 0.367986 | 3.4:+77051859 | MS.gene69745:CDS |
| ATTCCTGGGAATGCCGTCTA+TGG | 0.376767 | 3.4:-77055219 | None:intergenic |
| AGCTCATTTAATAGCCAAAC+AGG | 0.379561 | 3.4:+77055346 | MS.gene69745:CDS |
| CACGATGAGCATCTCATCTC+TGG | 0.391097 | 3.4:+77061892 | MS.gene69745:CDS |
| ACTATACTTAAGTTAATTGC+TGG | 0.394054 | 3.4:+77059209 | MS.gene69745:CDS |
| GTTGCCTTCTTCTGCATCTC+AGG | 0.394494 | 3.4:-77055863 | None:intergenic |
| CTATTTAGGAATTTGAACTT+TGG | 0.399684 | 3.4:+77058876 | MS.gene69745:CDS |
| CTTATGGCTTGAATCATACT+TGG | 0.400266 | 3.4:+77056089 | MS.gene69745:CDS |
| GCTGTTGAGGCGCTGATTCA+AGG | 0.402591 | 3.4:+77061720 | MS.gene69745:CDS |
| GCAAACTTTCGGATAAGTTT+GGG | 0.402709 | 3.4:+77052052 | MS.gene69745:CDS |
| GGTCATGATCTCATTCTTGA+TGG | 0.405003 | 3.4:+77054524 | MS.gene69745:CDS |
| ACAAGGGCACTGATGCGAAC+GGG | 0.405045 | 3.4:+77055562 | MS.gene69745:CDS |
| CCAATTGCATTTGGCGGAGA+TGG | 0.405699 | 3.4:+77054397 | MS.gene69745:CDS |
| GTTTCGGATGAATGAGGGTT+TGG | 0.410635 | 3.4:+77052125 | MS.gene69745:CDS |
| TTCAGTCAGCACCATGTTGA+TGG | 0.411812 | 3.4:+77059715 | MS.gene69745:CDS |
| TCATCAAGAAGCAACATATC+AGG | 0.412688 | 3.4:-77055947 | None:intergenic |
| GAGCTTCTTCCTCCAGAAGC+TGG | 0.414736 | 3.4:-77055328 | None:intergenic |
| GTTCAAATTCCTAAATAGAA+TGG | 0.416086 | 3.4:-77058871 | None:intergenic |
| GGAGCGGCATTCAGGGAAAT+CGG | 0.420688 | 3.4:-77052022 | None:intergenic |
| GGCGAAGTACCAATTGCATT+TGG | 0.422768 | 3.4:+77054388 | MS.gene69745:intron |
| GTAGATTTACCGATACCATT+TGG | 0.424990 | 3.4:-77059188 | None:intergenic |
| CTGTGCAGTGATGCATCATT+TGG | 0.425194 | 3.4:+77058834 | MS.gene69745:intron |
| CAACCCATGTACACTTTGTC+AGG | 0.431364 | 3.4:+77060343 | MS.gene69745:CDS |
| AGGGAAATCGGGAACGCATC+CGG | 0.435142 | 3.4:-77052010 | None:intergenic |
| GAAGCCTTGCAGCACCGTTT+CGG | 0.435696 | 3.4:+77052109 | MS.gene69745:CDS |
| GAGATGGAAGCGGTGAGAGC+AGG | 0.443078 | 3.4:+77054413 | MS.gene69745:CDS |
| ATCCGAAAGTTTGCTGCAAA+CGG | 0.444920 | 3.4:-77052043 | None:intergenic |
| TAAGTTTGGGAAGCATGGTT+TGG | 0.445253 | 3.4:+77052065 | MS.gene69745:CDS |
| AATCTCAACGCAGGGCTTGT+TGG | 0.446907 | 3.4:+77055146 | MS.gene69745:intron |
| TTCAAATTCCTAAATAGAAT+GGG | 0.447245 | 3.4:-77058870 | None:intergenic |
| ACGCCCTCTTGGCATTATAT+CGG | 0.448088 | 3.4:-77058270 | None:intergenic |
| GTTTCAGGCTCTGGATCGAC+TGG | 0.448248 | 3.4:+77058483 | MS.gene69745:intron |
| TGGAAAACTTACAAGATGAT+TGG | 0.451286 | 3.4:-77060536 | None:intergenic |
| AGCGGACCATCCACCGGCTC+CGG | 0.452908 | 3.4:-77052174 | None:intergenic |
| GCAGGGCTTGTTGGTAGAAA+CGG | 0.453343 | 3.4:+77055155 | MS.gene69745:intron |
| GAACAGCACACGAACCTGTT+TGG | 0.453729 | 3.4:-77055360 | None:intergenic |
| CCATCTCCGCCAAATGCAAT+TGG | 0.455176 | 3.4:-77054397 | None:intergenic |
| CGGAAGACAGTTCCAGAACT+TGG | 0.459759 | 3.4:-77059242 | None:intergenic |
| TGCAAACGGAGCGGCATTCA+GGG | 0.460739 | 3.4:-77052029 | None:intergenic |
| CTAAATAGAATGGGCCCTCC+AGG | 0.462066 | 3.4:-77058861 | None:intergenic |
| AGATAGTGAAATTATCCATA+TGG | 0.465348 | 3.4:-77054493 | None:intergenic |
| CACTGTGAAGGATATCCATA+TGG | 0.468849 | 3.4:+77054478 | MS.gene69745:CDS |
| TGAAGATTGAAAGGAGGAAG+AGG | 0.469188 | 3.4:+77052217 | MS.gene69745:CDS |
| GATAATTTCACTATCTCTGT+TGG | 0.470849 | 3.4:+77054500 | MS.gene69745:CDS |
| GGTGCGCCTGGTCTATCATC+TGG | 0.471714 | 3.4:-77058659 | None:intergenic |
| AGCTTCTTCCTCCAGAAGCT+GGG | 0.476084 | 3.4:-77055327 | None:intergenic |
| TCGTGCTTCACACACGCAAC+AGG | 0.477388 | 3.4:-77054440 | None:intergenic |
| CTGGAAGTGTGGAGGAGCTA+TGG | 0.480426 | 3.4:+77061911 | MS.gene69745:CDS |
| TTGAACAAGGGACGCCCTCT+TGG | 0.481635 | 3.4:-77058281 | None:intergenic |
| GATGCATCATTTGGTTATCC+TGG | 0.482876 | 3.4:+77058843 | MS.gene69745:CDS |
| GGAGATCTCCTCGTCGCCGC+CGG | 0.484288 | 3.4:+77051991 | MS.gene69745:CDS |
| CTATACTTAAGTTAATTGCT+GGG | 0.484866 | 3.4:+77059210 | MS.gene69745:CDS |
| CAGGGCTTGTTGGTAGAAAC+GGG | 0.486158 | 3.4:+77055156 | MS.gene69745:intron |
| CATATAAAGAAGAGGATTTG+AGG | 0.494310 | 3.4:-77059749 | None:intergenic |
| GCTGCAAGGCTTCTTACCGT+TGG | 0.494682 | 3.4:-77052099 | None:intergenic |
| TATACCTGACAAAGTGTACA+TGG | 0.498928 | 3.4:-77060347 | None:intergenic |
| TTTGCAGTGGTTGGACCAAA+TGG | 0.509188 | 3.4:+77059173 | MS.gene69745:intron |
| TGTAATATTTGACAATTCCT+GGG | 0.512737 | 3.4:-77055233 | None:intergenic |
| CCTGGTCTATCATCTGGAGT+GGG | 0.512756 | 3.4:-77058653 | None:intergenic |
| GAGCGGCATTCAGGGAAATC+GGG | 0.512789 | 3.4:-77052021 | None:intergenic |
| GCGTGTGTGAAGCACGAGGC+TGG | 0.512904 | 3.4:+77054446 | MS.gene69745:CDS |
| CTCTCCTGAGATGCAGAAGA+AGG | 0.514610 | 3.4:+77055859 | MS.gene69745:CDS |
| TGAAGCTCCGAAGAAGAAAC+CGG | 0.517022 | 3.4:+77052155 | MS.gene69745:CDS |
| AAACTTATAATTGGTGCGCC+TGG | 0.520729 | 3.4:-77058671 | None:intergenic |
| GCCGACGAGGATTTCGACTT+CGG | 0.522954 | 3.4:+77051937 | MS.gene69745:CDS |
| GACTTCGGCCTCGACGGCGA+AGG | 0.524522 | 3.4:+77051952 | MS.gene69745:CDS |
| CCTTGATTCTAGATTGAACA+AGG | 0.531578 | 3.4:-77058294 | None:intergenic |
| AGATGGAAGCGGTGAGAGCA+GGG | 0.532113 | 3.4:+77054414 | MS.gene69745:CDS |
| CTTAAAAGTTATCTTCGCAA+AGG | 0.533247 | 3.4:-77060482 | None:intergenic |
| TCGGATAAGTTTGGGAAGCA+TGG | 0.536309 | 3.4:+77052060 | MS.gene69745:CDS |
| GTGAAGCACGAGGCTGGTGG+TGG | 0.537830 | 3.4:+77054452 | MS.gene69745:CDS |
| CATCATTTGGTTATCCTGGA+GGG | 0.538782 | 3.4:+77058847 | MS.gene69745:CDS |
| TGGGAAGCATGGTTTGGTGA+AGG | 0.541915 | 3.4:+77052071 | MS.gene69745:CDS |
| ATACCATGAGAATGCCTCCT+TGG | 0.542842 | 3.4:-77061755 | None:intergenic |
| ATATCGGAACTTGTCAATGA+AGG | 0.546404 | 3.4:-77058254 | None:intergenic |
| CCTTGTTCAATCTAGAATCA+AGG | 0.547740 | 3.4:+77058294 | MS.gene69745:CDS |
| GCATTTGGCGGAGATGGAAG+CGG | 0.549745 | 3.4:+77054403 | MS.gene69745:CDS |
| ATGCCATAGACGGCATTCCC+AGG | 0.550487 | 3.4:+77055216 | MS.gene69745:CDS |
| TCATCAAGCAATATTATATG+TGG | 0.550810 | 3.4:-77060508 | None:intergenic |
| GTTGCTTCTTGATGAGCCTA+CGG | 0.554646 | 3.4:+77055955 | MS.gene69745:CDS |
| GCGATAAGTTGAAGATTGAA+AGG | 0.557317 | 3.4:+77052208 | MS.gene69745:CDS |
| GATGCGAACGGGGCAGTGAA+AGG | 0.557433 | 3.4:+77055573 | MS.gene69745:CDS |
| AATTTCACTATCTCTGTTGG+TGG | 0.557567 | 3.4:+77054503 | MS.gene69745:CDS |
| TATACTCAGCGAAGGTGCCA+TGG | 0.559357 | 3.4:-77061963 | None:intergenic |
| AAACCCTCATTCATCCGAAA+CGG | 0.559447 | 3.4:-77052123 | None:intergenic |
| GACAAGGGCACTGATGCGAA+CGG | 0.560701 | 3.4:+77055561 | MS.gene69745:CDS |
| GATTTCGACTTCGGCCTCGA+CGG | 0.563886 | 3.4:+77051946 | MS.gene69745:CDS |
| AAACTTACAAGATGATTGGA+TGG | 0.564229 | 3.4:-77060532 | None:intergenic |
| TATAAATTACCTTGGCAGAA+CGG | 0.565102 | 3.4:-77059262 | None:intergenic |
| AGCACCGTTTCGGATGAATG+AGG | 0.566933 | 3.4:+77052119 | MS.gene69745:CDS |
| TCCGAAGAAGAAACCGGAGC+CGG | 0.567539 | 3.4:+77052161 | MS.gene69745:CDS |
| CCCACTCCAGATGATAGACC+AGG | 0.568463 | 3.4:+77058653 | MS.gene69745:CDS |
| TCAGCGAAGGTGCCATGGAA+TGG | 0.568500 | 3.4:-77061958 | None:intergenic |
| CAACGCATCATATAAAGAAG+AGG | 0.568867 | 3.4:-77059757 | None:intergenic |
| GAATGGTGCCACTCTACCCT+CGG | 0.569604 | 3.4:-77061941 | None:intergenic |
| GAAGGTGCTTTCGATGCCCT+CGG | 0.569894 | 3.4:+77051970 | MS.gene69745:CDS |
| AAGAAACCGGAGCCGGTGGA+TGG | 0.570965 | 3.4:+77052168 | MS.gene69745:CDS |
| GCACCGTTTCGGATGAATGA+GGG | 0.573232 | 3.4:+77052120 | MS.gene69745:CDS |
| GCGTTCAAGAGCTCATATGC+AGG | 0.575845 | 3.4:+77056402 | MS.gene69745:CDS |
| GCATCATTTGGTTATCCTGG+AGG | 0.576224 | 3.4:+77058846 | MS.gene69745:CDS |
| GGTAGAGTGGCACCATTCCA+TGG | 0.577765 | 3.4:+77061946 | MS.gene69745:CDS |
| AACTGTCTTCCGTTCTGCCA+AGG | 0.579369 | 3.4:+77059253 | MS.gene69745:CDS |
| CACGTTGAGCAAGAAGTCGT+TGG | 0.580243 | 3.4:+77055254 | MS.gene69745:CDS |
| GTGGTTGGACCAAATGGTAT+CGG | 0.580615 | 3.4:+77059179 | MS.gene69745:intron |
| GAAGTACCAATTGCATTTGG+CGG | 0.583190 | 3.4:+77054391 | MS.gene69745:CDS |
| GACAAAAGCGGACCATCCAC+CGG | 0.588243 | 3.4:-77052180 | None:intergenic |
| CAAGGGCACTGATGCGAACG+GGG | 0.588851 | 3.4:+77055563 | MS.gene69745:CDS |
| GCCTGGTCTATCATCTGGAG+TGG | 0.590672 | 3.4:-77058654 | None:intergenic |
| GAAAGATGAACGCCAAAGAG+AGG | 0.591817 | 3.4:+77052239 | MS.gene69745:CDS |
| CATTAATAATTGCATCAACA+TGG | 0.594015 | 3.4:-77058507 | None:intergenic |
| GTAGGACTTGGATGCTGTTG+AGG | 0.594285 | 3.4:+77061707 | MS.gene69745:intron |
| AGTATTAAGAACACACTGCA+AGG | 0.599569 | 3.4:-77055291 | None:intergenic |
| GCATCTCATCTCTGGAAGTG+TGG | 0.601929 | 3.4:+77061900 | MS.gene69745:CDS |
| CGAAAGCACCTTCGCCGTCG+AGG | 0.604583 | 3.4:-77051960 | None:intergenic |
| GATTGTATCCGAGGGTAGAG+TGG | 0.606856 | 3.4:+77061933 | MS.gene69745:CDS |
| ATTCCAAGGAGGCATTCTCA+TGG | 0.606975 | 3.4:+77061752 | MS.gene69745:CDS |
| AATGCCGTCTATGGCATGCA+TGG | 0.608499 | 3.4:-77055210 | None:intergenic |
| ATGAATGAGGGTTTGGATGA+CGG | 0.609893 | 3.4:+77052132 | MS.gene69745:CDS |
| AACAACCTTCTTGAGGCACA+TGG | 0.610321 | 3.4:+77055187 | MS.gene69745:CDS |
| ATTCAAGCCATAAGACGGCA+TGG | 0.612908 | 3.4:-77056080 | None:intergenic |
| GGAGCTATGGATTGTATCCG+AGG | 0.613164 | 3.4:+77061924 | MS.gene69745:CDS |
| TCATCCGAAACGGTGCTGCA+AGG | 0.615311 | 3.4:-77052113 | None:intergenic |
| GAAGAAGAAACCGGAGCCGG+TGG | 0.615475 | 3.4:+77052164 | MS.gene69745:CDS |
| ATCTGAGGACAGTACTGACA+AGG | 0.616605 | 3.4:+77055545 | MS.gene69745:CDS |
| CTTGTTGGTAGAAACGGGAC+GGG | 0.619268 | 3.4:+77055161 | MS.gene69745:CDS |
| GTTCCGATATAATGCCAAGA+GGG | 0.619421 | 3.4:+77058267 | MS.gene69745:CDS |
| GTATGATTCAAGCCATAAGA+CGG | 0.619514 | 3.4:-77056085 | None:intergenic |
| AGACGGCATGGAGATCAAGA+TGG | 0.621817 | 3.4:-77056068 | None:intergenic |
| ATGGCCATGCATGCCATAGA+CGG | 0.621836 | 3.4:+77055206 | MS.gene69745:CDS |
| GAACGCATCCGGCGGCGACG+AGG | 0.624290 | 3.4:-77051999 | None:intergenic |
| TATACTTAAGTTAATTGCTG+GGG | 0.624643 | 3.4:+77059211 | MS.gene69745:CDS |
| GGCGACGAGGAGATCTCCGA+GGG | 0.629004 | 3.4:-77051986 | None:intergenic |
| CATGGCCATGTGCCTCAAGA+AGG | 0.629295 | 3.4:-77055192 | None:intergenic |
| TTTCAGGCTCTGGATCGACT+GGG | 0.640002 | 3.4:+77058484 | MS.gene69745:intron |
| GGCTTGAGCAAATATACAAG+AGG | 0.640033 | 3.4:+77055613 | MS.gene69745:CDS |
| GCTTGTTGGTAGAAACGGGA+CGG | 0.640562 | 3.4:+77055160 | MS.gene69745:CDS |
| TCTCATCTCTGGAAGTGTGG+AGG | 0.644641 | 3.4:+77061903 | MS.gene69745:CDS |
| CTGGTCTATCATCTGGAGTG+GGG | 0.646160 | 3.4:-77058652 | None:intergenic |
| ATAAGTTGAAGATTGAAAGG+AGG | 0.647143 | 3.4:+77052211 | MS.gene69745:CDS |
| TATCTTCTTATACTCAGCGA+AGG | 0.649071 | 3.4:-77061971 | None:intergenic |
| TGAGAGAGCCCAGCTTCTGG+AGG | 0.650248 | 3.4:+77055319 | MS.gene69745:CDS |
| ACGAGCAGCGTCCATACTTG+CGG | 0.653892 | 3.4:+77055668 | MS.gene69745:CDS |
| GAAATCGGGAACGCATCCGG+CGG | 0.656003 | 3.4:-77052007 | None:intergenic |
| TTTGGTGAAGGCGAAACCAA+CGG | 0.658701 | 3.4:+77052083 | MS.gene69745:CDS |
| GCCGAAGTCGAAATCCTCGT+CGG | 0.662237 | 3.4:-77051938 | None:intergenic |
| AGTCGAAATCCTCGTCGGCG+AGG | 0.663263 | 3.4:-77051933 | None:intergenic |
| TGTCTGTTAGAGGGAATCTG+AGG | 0.669440 | 3.4:+77055530 | MS.gene69745:intron |
| TGGTGGTGGTCACACTGTGA+AGG | 0.671121 | 3.4:+77054466 | MS.gene69745:CDS |
| GAAGCTGAAGATGACAGAGG+TGG | 0.678417 | 3.4:+77051831 | None:intergenic |
| CGTTAACGTCCTCGCCGACG+AGG | 0.679637 | 3.4:+77051924 | MS.gene69745:CDS |
| TGTGTGAAGCACGAGGCTGG+TGG | 0.684119 | 3.4:+77054449 | MS.gene69745:CDS |
| AAAGTTTGCTGCAAACGGAG+CGG | 0.685855 | 3.4:-77052038 | None:intergenic |
| GAGCTATGGATTGTATCCGA+GGG | 0.688117 | 3.4:+77061925 | MS.gene69745:CDS |
| AAGGAGATGCTATTTCACAA+AGG | 0.688418 | 3.4:+77055592 | MS.gene69745:CDS |
| ATACCTGACAAAGTGTACAT+GGG | 0.689854 | 3.4:-77060346 | None:intergenic |
| GTTGAAGCTGAAGATGACAG+AGG | 0.696326 | 3.4:+77051828 | None:intergenic |
| ATAAGTCAAGTCCATCAACA+TGG | 0.704139 | 3.4:-77059726 | None:intergenic |
| TTATCGCGTTCAGACAAAAG+CGG | 0.705329 | 3.4:-77052192 | None:intergenic |
| GGCGAGATCAGTAGTTCACG+AGG | 0.707353 | 3.4:+77051852 | MS.gene69745:CDS |
| CTTGATTCTAGATTGAACAA+GGG | 0.709521 | 3.4:-77058293 | None:intergenic |
| TGTTGCGTGTGTGAAGCACG+AGG | 0.713473 | 3.4:+77054442 | MS.gene69745:CDS |
| TCTGAGGACAGTACTGACAA+GGG | 0.720650 | 3.4:+77055546 | MS.gene69745:CDS |
| AGTTCCGATATAATGCCAAG+AGG | 0.723283 | 3.4:+77058266 | MS.gene69745:CDS |
| CGGCGACGAGGAGATCTCCG+AGG | 0.725892 | 3.4:-77051987 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 77051841 | 77062008 | 77051841 | ID=MS.gene69745 |
| chr3.4 | mRNA | 77051841 | 77062008 | 77051841 | ID=MS.gene69745.t1;Parent=MS.gene69745 |
| chr3.4 | exon | 77051841 | 77052260 | 77051841 | ID=MS.gene69745.t1.exon1;Parent=MS.gene69745.t1 |
| chr3.4 | CDS | 77051841 | 77052260 | 77051841 | ID=cds.MS.gene69745.t1;Parent=MS.gene69745.t1 |
| chr3.4 | exon | 77054389 | 77054578 | 77054389 | ID=MS.gene69745.t1.exon2;Parent=MS.gene69745.t1 |
| chr3.4 | CDS | 77054389 | 77054578 | 77054389 | ID=cds.MS.gene69745.t1;Parent=MS.gene69745.t1 |
| chr3.4 | exon | 77055159 | 77055367 | 77055159 | ID=MS.gene69745.t1.exon3;Parent=MS.gene69745.t1 |
| chr3.4 | CDS | 77055159 | 77055367 | 77055159 | ID=cds.MS.gene69745.t1;Parent=MS.gene69745.t1 |
| chr3.4 | exon | 77055540 | 77055689 | 77055540 | ID=MS.gene69745.t1.exon4;Parent=MS.gene69745.t1 |
| chr3.4 | CDS | 77055540 | 77055689 | 77055540 | ID=cds.MS.gene69745.t1;Parent=MS.gene69745.t1 |
| chr3.4 | exon | 77055848 | 77055976 | 77055848 | ID=MS.gene69745.t1.exon5;Parent=MS.gene69745.t1 |
| chr3.4 | CDS | 77055848 | 77055976 | 77055848 | ID=cds.MS.gene69745.t1;Parent=MS.gene69745.t1 |
| chr3.4 | exon | 77056066 | 77056167 | 77056066 | ID=MS.gene69745.t1.exon6;Parent=MS.gene69745.t1 |
| chr3.4 | CDS | 77056066 | 77056167 | 77056066 | ID=cds.MS.gene69745.t1;Parent=MS.gene69745.t1 |
| chr3.4 | exon | 77056277 | 77056423 | 77056277 | ID=MS.gene69745.t1.exon7;Parent=MS.gene69745.t1 |
| chr3.4 | CDS | 77056277 | 77056423 | 77056277 | ID=cds.MS.gene69745.t1;Parent=MS.gene69745.t1 |
| chr3.4 | exon | 77058253 | 77058315 | 77058253 | ID=MS.gene69745.t1.exon8;Parent=MS.gene69745.t1 |
| chr3.4 | CDS | 77058253 | 77058315 | 77058253 | ID=cds.MS.gene69745.t1;Parent=MS.gene69745.t1 |
| chr3.4 | exon | 77058490 | 77058536 | 77058490 | ID=MS.gene69745.t1.exon9;Parent=MS.gene69745.t1 |
| chr3.4 | CDS | 77058490 | 77058536 | 77058490 | ID=cds.MS.gene69745.t1;Parent=MS.gene69745.t1 |
| chr3.4 | exon | 77058637 | 77058696 | 77058637 | ID=MS.gene69745.t1.exon10;Parent=MS.gene69745.t1 |
| chr3.4 | CDS | 77058637 | 77058696 | 77058637 | ID=cds.MS.gene69745.t1;Parent=MS.gene69745.t1 |
| chr3.4 | exon | 77058842 | 77058924 | 77058842 | ID=MS.gene69745.t1.exon11;Parent=MS.gene69745.t1 |
| chr3.4 | CDS | 77058842 | 77058924 | 77058842 | ID=cds.MS.gene69745.t1;Parent=MS.gene69745.t1 |
| chr3.4 | exon | 77059180 | 77059274 | 77059180 | ID=MS.gene69745.t1.exon12;Parent=MS.gene69745.t1 |
| chr3.4 | CDS | 77059180 | 77059274 | 77059180 | ID=cds.MS.gene69745.t1;Parent=MS.gene69745.t1 |
| chr3.4 | exon | 77059700 | 77059786 | 77059700 | ID=MS.gene69745.t1.exon13;Parent=MS.gene69745.t1 |
| chr3.4 | CDS | 77059700 | 77059786 | 77059700 | ID=cds.MS.gene69745.t1;Parent=MS.gene69745.t1 |
| chr3.4 | exon | 77060277 | 77060364 | 77060277 | ID=MS.gene69745.t1.exon14;Parent=MS.gene69745.t1 |
| chr3.4 | CDS | 77060277 | 77060364 | 77060277 | ID=cds.MS.gene69745.t1;Parent=MS.gene69745.t1 |
| chr3.4 | exon | 77060461 | 77060546 | 77060461 | ID=MS.gene69745.t1.exon15;Parent=MS.gene69745.t1 |
| chr3.4 | CDS | 77060461 | 77060546 | 77060461 | ID=cds.MS.gene69745.t1;Parent=MS.gene69745.t1 |
| chr3.4 | exon | 77061711 | 77061773 | 77061711 | ID=MS.gene69745.t1.exon16;Parent=MS.gene69745.t1 |
| chr3.4 | CDS | 77061711 | 77061773 | 77061711 | ID=cds.MS.gene69745.t1;Parent=MS.gene69745.t1 |
| chr3.4 | exon | 77061886 | 77062008 | 77061886 | ID=MS.gene69745.t1.exon17;Parent=MS.gene69745.t1 |
| chr3.4 | CDS | 77061886 | 77062008 | 77061886 | ID=cds.MS.gene69745.t1;Parent=MS.gene69745.t1 |
| Gene Sequence |
| Protein sequence |
