Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055336.t1 | XP_003626706.2 | 73.2 | 366 | 88 | 7 | 1 | 360 | 13 | 374 | 1.40E-125 | 459.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055336.t1 | Q9M0B8 | 39.6 | 376 | 190 | 9 | 1 | 358 | 1 | 357 | 3.7e-58 | 226.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055336.t1 | G7LBL0 | 73.2 | 366 | 88 | 7 | 1 | 360 | 13 | 374 | 1.0e-125 | 459.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055336 | MS.gene62756 | 0.849919 | 2.37E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene018396 | MS.gene055336 | PPI |
| MS.gene055336 | MS.gene99888 | PPI |
| MS.gene055336 | MS.gene035645 | PPI |
| MS.gene055336 | MS.gene33586 | PPI |
| MS.gene055336 | MS.gene007962 | PPI |
| MS.gene055336 | MS.gene012466 | PPI |
| MS.gene62998 | MS.gene055336 | PPI |
| MS.gene055336 | MS.gene039955 | PPI |
| MS.gene57955 | MS.gene055336 | PPI |
| MS.gene65952 | MS.gene055336 | PPI |
| MS.gene055336 | MS.gene026616 | PPI |
| MS.gene055336 | MS.gene031882 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055336.t1 | MTR_8g006120 | 70.000 | 390 | 59 | 10 | 1 | 360 | 13 | 374 | 3.20e-163 | 461 |
| MS.gene055336.t1 | MTR_2g065550 | 57.297 | 370 | 135 | 10 | 1 | 359 | 13 | 370 | 6.50e-130 | 377 |
| MS.gene055336.t1 | MTR_8g006010 | 50.820 | 366 | 163 | 9 | 1 | 357 | 13 | 370 | 1.37e-107 | 320 |
| MS.gene055336.t1 | MTR_8g006050 | 47.423 | 388 | 114 | 12 | 1 | 358 | 14 | 341 | 3.14e-97 | 293 |
| MS.gene055336.t1 | MTR_8g006090 | 50.425 | 353 | 156 | 6 | 1 | 342 | 14 | 358 | 1.25e-96 | 291 |
| MS.gene055336.t1 | MTR_8g006090 | 65.888 | 214 | 70 | 2 | 129 | 342 | 68 | 278 | 6.57e-82 | 251 |
| MS.gene055336.t1 | MTR_8g006090 | 43.963 | 323 | 121 | 4 | 1 | 291 | 14 | 308 | 2.02e-72 | 228 |
| MS.gene055336.t1 | MTR_4g129650 | 36.413 | 368 | 201 | 8 | 1 | 358 | 11 | 355 | 8.69e-64 | 207 |
| MS.gene055336.t1 | MTR_4g129650 | 44.595 | 222 | 102 | 5 | 137 | 358 | 48 | 248 | 3.05e-54 | 179 |
| MS.gene055336.t1 | MTR_3g112480 | 31.948 | 385 | 217 | 8 | 2 | 360 | 24 | 389 | 6.90e-52 | 177 |
| MS.gene055336.t1 | MTR_6g081840 | 31.805 | 349 | 221 | 6 | 7 | 345 | 19 | 360 | 3.56e-47 | 164 |
| MS.gene055336.t1 | MTR_3g112480 | 37.083 | 240 | 134 | 3 | 125 | 360 | 36 | 262 | 1.18e-45 | 157 |
| MS.gene055336.t1 | MTR_3g112480 | 37.083 | 240 | 134 | 3 | 125 | 360 | 108 | 334 | 6.32e-45 | 157 |
| MS.gene055336.t1 | MTR_1g023180 | 29.412 | 357 | 222 | 5 | 1 | 334 | 24 | 373 | 3.91e-44 | 157 |
| MS.gene055336.t1 | MTR_3g012420 | 32.845 | 341 | 197 | 9 | 2 | 325 | 21 | 346 | 1.28e-42 | 152 |
| MS.gene055336.t1 | MTR_1g074120 | 32.827 | 329 | 203 | 8 | 3 | 321 | 21 | 341 | 5.00e-41 | 147 |
| MS.gene055336.t1 | MTR_1g074070 | 31.515 | 330 | 210 | 8 | 1 | 321 | 19 | 341 | 1.39e-40 | 146 |
| MS.gene055336.t1 | MTR_2g016710 | 29.859 | 355 | 201 | 11 | 1 | 334 | 11 | 338 | 3.08e-40 | 145 |
| MS.gene055336.t1 | MTR_8g041390 | 30.000 | 370 | 223 | 13 | 2 | 349 | 17 | 372 | 3.11e-40 | 146 |
| MS.gene055336.t1 | MTR_1g051120 | 32.464 | 345 | 213 | 10 | 1 | 334 | 19 | 354 | 3.27e-40 | 145 |
| MS.gene055336.t1 | MTR_3g072500 | 29.589 | 365 | 231 | 12 | 1 | 345 | 23 | 381 | 5.10e-39 | 143 |
| MS.gene055336.t1 | MTR_1g073990 | 34.463 | 354 | 206 | 12 | 1 | 343 | 19 | 357 | 1.06e-38 | 141 |
| MS.gene055336.t1 | MTR_1g030580 | 30.000 | 350 | 222 | 9 | 1 | 336 | 19 | 359 | 2.38e-38 | 141 |
| MS.gene055336.t1 | MTR_1g074160 | 32.229 | 332 | 205 | 9 | 1 | 321 | 16 | 338 | 3.05e-38 | 140 |
| MS.gene055336.t1 | MTR_1g070175 | 30.124 | 322 | 166 | 7 | 21 | 313 | 39 | 330 | 2.12e-37 | 138 |
| MS.gene055336.t1 | MTR_1g074020 | 30.488 | 328 | 188 | 7 | 17 | 323 | 32 | 340 | 3.70e-36 | 134 |
| MS.gene055336.t1 | MTR_5g021160 | 27.841 | 352 | 225 | 6 | 1 | 332 | 10 | 352 | 1.55e-35 | 133 |
| MS.gene055336.t1 | MTR_3g095450 | 28.242 | 347 | 198 | 10 | 1 | 317 | 8 | 333 | 2.61e-35 | 132 |
| MS.gene055336.t1 | MTR_2g102340 | 30.117 | 342 | 182 | 10 | 3 | 314 | 17 | 331 | 2.95e-35 | 132 |
| MS.gene055336.t1 | MTR_0096s0100 | 30.573 | 314 | 209 | 5 | 6 | 313 | 26 | 336 | 3.47e-35 | 132 |
| MS.gene055336.t1 | MTR_3g090550 | 27.528 | 356 | 216 | 9 | 1 | 334 | 9 | 344 | 2.88e-34 | 129 |
| MS.gene055336.t1 | MTR_3g072500 | 33.838 | 198 | 122 | 2 | 157 | 345 | 81 | 278 | 2.98e-34 | 128 |
| MS.gene055336.t1 | MTR_2g007960 | 28.319 | 339 | 200 | 8 | 3 | 314 | 17 | 339 | 4.18e-34 | 130 |
| MS.gene055336.t1 | MTR_3g095420 | 26.190 | 336 | 219 | 6 | 1 | 317 | 10 | 335 | 5.80e-34 | 129 |
| MS.gene055336.t1 | MTR_1g114210 | 26.286 | 350 | 202 | 8 | 3 | 323 | 16 | 338 | 7.49e-34 | 128 |
| MS.gene055336.t1 | MTR_8g092650 | 39.735 | 151 | 91 | 0 | 163 | 313 | 101 | 251 | 7.72e-33 | 124 |
| MS.gene055336.t1 | MTR_3g072530 | 28.242 | 347 | 221 | 11 | 4 | 334 | 20 | 354 | 1.17e-32 | 125 |
| MS.gene055336.t1 | MTR_1g038560 | 28.182 | 330 | 205 | 8 | 1 | 313 | 6 | 320 | 1.75e-32 | 124 |
| MS.gene055336.t1 | MTR_2g007970 | 36.458 | 192 | 115 | 3 | 162 | 352 | 180 | 365 | 2.37e-32 | 125 |
| MS.gene055336.t1 | MTR_8g092650 | 39.735 | 151 | 91 | 0 | 163 | 313 | 179 | 329 | 3.95e-32 | 124 |
| MS.gene055336.t1 | MTR_1g030600 | 29.305 | 331 | 220 | 6 | 6 | 326 | 26 | 352 | 4.16e-32 | 124 |
| MS.gene055336.t1 | MTR_6g036450 | 28.367 | 349 | 198 | 9 | 1 | 321 | 19 | 343 | 9.09e-32 | 123 |
| MS.gene055336.t1 | MTR_7g100050 | 28.704 | 324 | 213 | 9 | 1 | 313 | 16 | 332 | 9.10e-32 | 123 |
| MS.gene055336.t1 | MTR_2g007990 | 27.729 | 339 | 207 | 9 | 3 | 321 | 20 | 340 | 1.40e-31 | 123 |
| MS.gene055336.t1 | MTR_8g006090 | 68.932 | 103 | 30 | 1 | 134 | 236 | 73 | 173 | 1.81e-31 | 118 |
| MS.gene055336.t1 | MTR_4g106720 | 27.245 | 323 | 217 | 8 | 2 | 313 | 15 | 330 | 3.05e-31 | 121 |
| MS.gene055336.t1 | MTR_8g006090 | 68.932 | 103 | 30 | 1 | 134 | 236 | 153 | 253 | 3.24e-31 | 120 |
| MS.gene055336.t1 | MTR_8g006090 | 60.000 | 50 | 20 | 0 | 1 | 50 | 14 | 63 | 1.10e-12 | 68.2 |
| MS.gene055336.t1 | MTR_3g072560 | 29.787 | 376 | 228 | 11 | 3 | 356 | 23 | 384 | 5.85e-31 | 121 |
| MS.gene055336.t1 | MTR_4g094340 | 38.158 | 152 | 94 | 0 | 162 | 313 | 112 | 263 | 5.98e-31 | 119 |
| MS.gene055336.t1 | MTR_4g094340 | 34.857 | 175 | 111 | 1 | 162 | 336 | 196 | 367 | 1.56e-30 | 120 |
| MS.gene055336.t1 | MTR_4g094340 | 34.857 | 175 | 111 | 1 | 162 | 336 | 178 | 349 | 1.75e-30 | 119 |
| MS.gene055336.t1 | MTR_1g068630 | 26.769 | 325 | 216 | 8 | 1 | 313 | 18 | 332 | 3.14e-30 | 119 |
| MS.gene055336.t1 | MTR_3g095440 | 26.761 | 355 | 221 | 8 | 1 | 334 | 8 | 344 | 4.73e-30 | 118 |
| MS.gene055336.t1 | MTR_2g016710 | 28.846 | 312 | 181 | 10 | 1 | 291 | 11 | 302 | 4.97e-30 | 117 |
| MS.gene055336.t1 | MTR_4g094342 | 27.760 | 317 | 215 | 6 | 3 | 308 | 18 | 331 | 7.01e-30 | 118 |
| MS.gene055336.t1 | MTR_3g095460 | 37.013 | 154 | 97 | 0 | 160 | 313 | 173 | 326 | 7.58e-30 | 117 |
| MS.gene055336.t1 | MTR_2g027030 | 25.330 | 379 | 225 | 10 | 3 | 352 | 17 | 366 | 2.69e-29 | 116 |
| MS.gene055336.t1 | MTR_4g094352 | 27.907 | 387 | 222 | 10 | 3 | 355 | 17 | 380 | 6.61e-29 | 115 |
| MS.gene055336.t1 | MTR_5g021160 | 29.851 | 201 | 135 | 1 | 138 | 332 | 69 | 269 | 1.44e-28 | 112 |
| MS.gene055336.t1 | MTR_2g007260 | 27.410 | 332 | 211 | 8 | 3 | 314 | 19 | 340 | 2.10e-28 | 114 |
| MS.gene055336.t1 | MTR_5g068790 | 26.300 | 327 | 221 | 5 | 1 | 314 | 21 | 340 | 1.72e-27 | 111 |
| MS.gene055336.t1 | MTR_3g072520 | 27.879 | 330 | 206 | 8 | 3 | 313 | 14 | 330 | 3.94e-27 | 110 |
| MS.gene055336.t1 | MTR_3g019050 | 26.087 | 345 | 197 | 9 | 1 | 314 | 21 | 338 | 2.08e-26 | 108 |
| MS.gene055336.t1 | MTR_5g034990 | 27.063 | 303 | 204 | 5 | 23 | 317 | 39 | 332 | 3.47e-26 | 107 |
| MS.gene055336.t1 | MTR_4g094360 | 28.274 | 336 | 213 | 8 | 3 | 323 | 19 | 341 | 2.42e-25 | 105 |
| MS.gene055336.t1 | MTR_7g111830 | 30.968 | 155 | 107 | 0 | 160 | 314 | 179 | 333 | 3.00e-25 | 105 |
| MS.gene055336.t1 | MTR_0103s0090 | 27.301 | 326 | 219 | 5 | 2 | 317 | 15 | 332 | 4.35e-25 | 104 |
| MS.gene055336.t1 | MTR_4g094360 | 34.225 | 187 | 118 | 2 | 138 | 323 | 112 | 294 | 7.08e-25 | 103 |
| MS.gene055336.t1 | MTR_5g089390 | 25.545 | 321 | 221 | 6 | 2 | 314 | 18 | 328 | 7.51e-25 | 103 |
| MS.gene055336.t1 | MTR_5g069040 | 24.398 | 332 | 223 | 6 | 1 | 314 | 21 | 342 | 1.38e-24 | 103 |
| MS.gene055336.t1 | MTR_1g030400 | 28.571 | 154 | 110 | 0 | 161 | 314 | 179 | 332 | 1.37e-23 | 100 |
| MS.gene055336.t1 | MTR_4g094362 | 38.889 | 144 | 88 | 0 | 170 | 313 | 191 | 334 | 1.74e-23 | 100 |
| MS.gene055336.t1 | MTR_0103s0090 | 31.285 | 179 | 120 | 1 | 139 | 317 | 66 | 241 | 5.22e-23 | 97.4 |
| MS.gene055336.t1 | MTR_5g025290 | 24.776 | 335 | 225 | 9 | 1 | 313 | 14 | 343 | 1.77e-21 | 94.7 |
| MS.gene055336.t1 | MTR_5g025290 | 24.324 | 333 | 229 | 8 | 1 | 313 | 42 | 371 | 2.33e-21 | 94.7 |
| MS.gene055336.t1 | MTR_8g072350 | 24.324 | 333 | 227 | 9 | 2 | 313 | 13 | 341 | 7.85e-21 | 92.8 |
| MS.gene055336.t1 | MTR_5g025370 | 24.044 | 366 | 248 | 9 | 1 | 338 | 13 | 376 | 5.27e-20 | 90.5 |
| MS.gene055336.t1 | MTR_6g007743 | 25.472 | 318 | 210 | 7 | 22 | 325 | 36 | 340 | 1.03e-19 | 89.7 |
| MS.gene055336.t1 | MTR_5g025330 | 23.894 | 339 | 235 | 7 | 1 | 318 | 12 | 348 | 1.71e-19 | 90.1 |
| MS.gene055336.t1 | MTR_1g052205 | 28.889 | 180 | 114 | 3 | 138 | 313 | 45 | 214 | 2.83e-19 | 86.7 |
| MS.gene055336.t1 | MTR_5g034980 | 28.249 | 177 | 123 | 2 | 138 | 313 | 152 | 325 | 1.43e-18 | 86.3 |
| MS.gene055336.t1 | MTR_5g025340 | 22.703 | 370 | 254 | 9 | 1 | 342 | 13 | 378 | 1.51e-18 | 86.3 |
| MS.gene055336.t1 | MTR_6g007760 | 25.517 | 290 | 191 | 7 | 18 | 293 | 31 | 309 | 1.57e-18 | 85.5 |
| MS.gene055336.t1 | MTR_5g034910 | 29.091 | 165 | 117 | 0 | 162 | 326 | 174 | 338 | 8.53e-18 | 84.0 |
| MS.gene055336.t1 | MTR_1g014510 | 29.651 | 172 | 114 | 2 | 149 | 313 | 161 | 332 | 1.75e-17 | 83.6 |
| MS.gene055336.t1 | MTR_6g007753 | 28.636 | 220 | 143 | 4 | 138 | 351 | 117 | 328 | 2.00e-17 | 84.0 |
| MS.gene055336.t1 | MTR_6g007753 | 28.889 | 180 | 123 | 1 | 138 | 317 | 441 | 615 | 4.54e-15 | 77.0 |
| MS.gene055336.t1 | MTR_4g094360 | 26.645 | 304 | 199 | 7 | 3 | 291 | 19 | 313 | 2.73e-17 | 82.0 |
| MS.gene055336.t1 | MTR_5g034930 | 28.814 | 177 | 122 | 2 | 138 | 313 | 151 | 324 | 3.17e-17 | 82.0 |
| MS.gene055336.t1 | MTR_5g025400 | 23.699 | 346 | 239 | 9 | 1 | 323 | 14 | 357 | 1.71e-16 | 80.5 |
| MS.gene055336.t1 | MTR_6g007747 | 25.962 | 312 | 197 | 5 | 22 | 317 | 36 | 329 | 2.29e-16 | 79.7 |
| MS.gene055336.t1 | MTR_5g012650 | 30.387 | 181 | 111 | 5 | 147 | 320 | 163 | 335 | 5.71e-16 | 78.6 |
| MS.gene055336.t1 | MTR_3g072500 | 27.386 | 241 | 158 | 9 | 1 | 230 | 23 | 257 | 9.73e-16 | 77.0 |
| MS.gene055336.t1 | MTR_6g007740 | 25.152 | 330 | 224 | 6 | 7 | 324 | 21 | 339 | 7.54e-15 | 75.9 |
| MS.gene055336.t1 | MTR_6g007750 | 24.359 | 312 | 205 | 7 | 23 | 317 | 37 | 334 | 3.70e-13 | 70.1 |
| MS.gene055336.t1 | MTR_6g007757 | 25.513 | 341 | 215 | 6 | 22 | 344 | 36 | 355 | 1.57e-12 | 68.6 |
| MS.gene055336.t1 | MTR_3g093450 | 30.000 | 140 | 66 | 4 | 181 | 310 | 59 | 176 | 8.64e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055336.t1 | AT4G30420 | 39.628 | 376 | 190 | 9 | 1 | 358 | 1 | 357 | 9.93e-79 | 246 |
| MS.gene055336.t1 | AT4G30420 | 39.628 | 376 | 190 | 9 | 1 | 358 | 11 | 367 | 1.53e-78 | 246 |
| MS.gene055336.t1 | AT4G28040 | 34.759 | 374 | 203 | 7 | 1 | 358 | 10 | 358 | 1.13e-59 | 196 |
| MS.gene055336.t1 | AT4G28040 | 34.759 | 374 | 203 | 7 | 1 | 358 | 10 | 358 | 1.13e-59 | 196 |
| MS.gene055336.t1 | AT4G28040 | 34.759 | 374 | 203 | 7 | 1 | 358 | 10 | 358 | 1.13e-59 | 196 |
| MS.gene055336.t1 | AT4G28040 | 34.759 | 374 | 203 | 7 | 1 | 358 | 10 | 358 | 1.13e-59 | 196 |
| MS.gene055336.t1 | AT4G28040 | 34.759 | 374 | 203 | 7 | 1 | 358 | 10 | 358 | 1.13e-59 | 196 |
| MS.gene055336.t1 | AT1G75500 | 32.641 | 337 | 207 | 5 | 1 | 322 | 22 | 353 | 2.03e-50 | 173 |
| MS.gene055336.t1 | AT1G75500 | 32.641 | 337 | 207 | 5 | 1 | 322 | 22 | 353 | 2.03e-50 | 173 |
| MS.gene055336.t1 | AT3G18200 | 31.642 | 335 | 211 | 6 | 1 | 325 | 37 | 363 | 1.70e-46 | 162 |
| MS.gene055336.t1 | AT3G53210 | 32.188 | 320 | 203 | 5 | 1 | 311 | 12 | 326 | 1.39e-42 | 152 |
| MS.gene055336.t1 | AT4G08300 | 27.824 | 363 | 247 | 6 | 1 | 351 | 13 | 372 | 1.00e-41 | 150 |
| MS.gene055336.t1 | AT3G18200 | 42.941 | 170 | 95 | 2 | 158 | 325 | 64 | 233 | 1.09e-41 | 146 |
| MS.gene055336.t1 | AT1G21890 | 29.909 | 331 | 208 | 7 | 1 | 313 | 13 | 337 | 4.03e-39 | 143 |
| MS.gene055336.t1 | AT3G53210 | 40.230 | 174 | 103 | 1 | 138 | 311 | 97 | 269 | 1.29e-38 | 140 |
| MS.gene055336.t1 | AT1G43650 | 28.614 | 339 | 226 | 5 | 1 | 331 | 9 | 339 | 2.28e-37 | 137 |
| MS.gene055336.t1 | AT1G09380 | 28.024 | 339 | 193 | 8 | 1 | 310 | 10 | 326 | 2.06e-35 | 133 |
| MS.gene055336.t1 | AT2G39510 | 28.528 | 326 | 211 | 7 | 1 | 313 | 10 | 326 | 7.37e-35 | 131 |
| MS.gene055336.t1 | AT5G07050 | 30.899 | 356 | 216 | 12 | 2 | 336 | 21 | 367 | 1.08e-34 | 132 |
| MS.gene055336.t1 | AT1G44800 | 26.536 | 358 | 225 | 10 | 1 | 336 | 13 | 354 | 7.79e-33 | 126 |
| MS.gene055336.t1 | AT4G08290 | 27.945 | 365 | 230 | 9 | 3 | 346 | 17 | 369 | 9.39e-33 | 126 |
| MS.gene055336.t1 | AT5G13670 | 28.443 | 334 | 203 | 9 | 1 | 313 | 10 | 328 | 1.02e-32 | 125 |
| MS.gene055336.t1 | AT2G40900 | 28.371 | 356 | 222 | 9 | 2 | 336 | 14 | 357 | 3.62e-32 | 124 |
| MS.gene055336.t1 | AT5G64700 | 35.912 | 181 | 109 | 1 | 161 | 341 | 180 | 353 | 4.12e-32 | 124 |
| MS.gene055336.t1 | AT2G37460 | 26.629 | 353 | 223 | 10 | 1 | 337 | 17 | 349 | 1.31e-31 | 123 |
| MS.gene055336.t1 | AT2G37450 | 27.215 | 316 | 201 | 6 | 3 | 313 | 13 | 304 | 1.36e-30 | 119 |
| MS.gene055336.t1 | AT1G11450 | 33.149 | 181 | 118 | 1 | 138 | 318 | 69 | 246 | 4.66e-30 | 116 |
| MS.gene055336.t1 | AT3G56620 | 26.168 | 321 | 212 | 5 | 2 | 310 | 14 | 321 | 1.20e-29 | 117 |
| MS.gene055336.t1 | AT1G11450 | 33.149 | 181 | 118 | 1 | 138 | 318 | 110 | 287 | 1.31e-29 | 115 |
| MS.gene055336.t1 | AT1G11450 | 33.149 | 181 | 118 | 1 | 138 | 318 | 117 | 294 | 1.62e-29 | 115 |
| MS.gene055336.t1 | AT1G11450 | 27.760 | 317 | 188 | 9 | 24 | 318 | 41 | 338 | 2.58e-29 | 116 |
| MS.gene055336.t1 | AT5G40240 | 26.911 | 327 | 220 | 9 | 22 | 335 | 43 | 363 | 4.31e-28 | 113 |
| MS.gene055336.t1 | AT5G40240 | 26.911 | 327 | 220 | 9 | 22 | 335 | 43 | 363 | 4.31e-28 | 113 |
| MS.gene055336.t1 | AT5G40240 | 26.911 | 327 | 220 | 9 | 22 | 335 | 57 | 377 | 6.27e-28 | 113 |
| MS.gene055336.t1 | AT5G40230 | 26.404 | 356 | 240 | 8 | 2 | 344 | 24 | 370 | 6.51e-28 | 112 |
| MS.gene055336.t1 | AT4G01430 | 29.756 | 205 | 143 | 1 | 138 | 341 | 17 | 221 | 6.55e-28 | 109 |
| MS.gene055336.t1 | AT1G21890 | 27.832 | 309 | 199 | 7 | 1 | 291 | 13 | 315 | 1.07e-27 | 111 |
| MS.gene055336.t1 | AT3G30340 | 31.646 | 158 | 108 | 0 | 164 | 321 | 180 | 337 | 3.66e-27 | 110 |
| MS.gene055336.t1 | AT1G11460 | 27.707 | 314 | 185 | 9 | 24 | 314 | 41 | 335 | 4.23e-27 | 110 |
| MS.gene055336.t1 | AT1G01070 | 35.028 | 177 | 114 | 1 | 138 | 314 | 114 | 289 | 4.32e-27 | 109 |
| MS.gene055336.t1 | AT3G28050 | 27.247 | 356 | 231 | 10 | 2 | 345 | 15 | 354 | 5.21e-27 | 110 |
| MS.gene055336.t1 | AT4G01440 | 24.852 | 338 | 222 | 4 | 3 | 321 | 11 | 335 | 1.06e-26 | 109 |
| MS.gene055336.t1 | AT1G01070 | 35.227 | 176 | 113 | 1 | 138 | 313 | 161 | 335 | 1.40e-26 | 108 |
| MS.gene055336.t1 | AT4G01440 | 29.442 | 197 | 126 | 1 | 125 | 321 | 44 | 227 | 1.51e-26 | 106 |
| MS.gene055336.t1 | AT4G01440 | 29.442 | 197 | 126 | 1 | 125 | 321 | 44 | 227 | 1.51e-26 | 106 |
| MS.gene055336.t1 | AT4G01430 | 29.756 | 205 | 143 | 1 | 138 | 341 | 154 | 358 | 2.18e-26 | 108 |
| MS.gene055336.t1 | AT2G37450 | 30.508 | 177 | 108 | 2 | 138 | 313 | 70 | 232 | 6.35e-24 | 99.8 |
| MS.gene055336.t1 | AT2G37450 | 30.508 | 177 | 108 | 2 | 138 | 313 | 103 | 265 | 1.02e-23 | 99.8 |
| MS.gene055336.t1 | AT4G01440 | 23.473 | 311 | 206 | 4 | 3 | 294 | 11 | 308 | 5.41e-21 | 92.8 |
| MS.gene055336.t1 | AT3G53210 | 28.112 | 249 | 165 | 5 | 1 | 240 | 12 | 255 | 8.34e-21 | 90.9 |
| MS.gene055336.t1 | AT1G70260 | 24.490 | 343 | 228 | 7 | 1 | 323 | 14 | 345 | 8.80e-21 | 92.8 |
| MS.gene055336.t1 | AT5G47470 | 32.919 | 161 | 100 | 3 | 164 | 319 | 221 | 378 | 1.96e-20 | 92.0 |
| MS.gene055336.t1 | AT4G15540 | 27.168 | 346 | 220 | 6 | 2 | 334 | 20 | 346 | 2.14e-20 | 91.3 |
| MS.gene055336.t1 | AT4G15540 | 27.168 | 346 | 220 | 6 | 2 | 334 | 20 | 346 | 2.14e-20 | 91.3 |
| MS.gene055336.t1 | AT1G25270 | 26.074 | 326 | 220 | 6 | 1 | 313 | 5 | 322 | 2.43e-20 | 91.3 |
| MS.gene055336.t1 | AT5G47470 | 32.919 | 161 | 100 | 3 | 164 | 319 | 221 | 378 | 2.81e-20 | 91.7 |
| MS.gene055336.t1 | AT5G47470 | 32.716 | 162 | 101 | 3 | 164 | 320 | 193 | 351 | 2.93e-20 | 91.3 |
| MS.gene055336.t1 | AT5G45370 | 24.024 | 333 | 228 | 8 | 2 | 313 | 23 | 351 | 2.07e-19 | 89.0 |
| MS.gene055336.t1 | AT5G45370 | 24.024 | 333 | 228 | 8 | 2 | 313 | 23 | 351 | 2.07e-19 | 89.0 |
| MS.gene055336.t1 | AT1G60050 | 22.376 | 362 | 261 | 5 | 1 | 345 | 15 | 373 | 2.64e-19 | 88.6 |
| MS.gene055336.t1 | AT3G45870 | 32.168 | 143 | 96 | 1 | 166 | 308 | 42 | 183 | 2.96e-19 | 86.3 |
| MS.gene055336.t1 | AT1G11450 | 25.862 | 290 | 174 | 9 | 24 | 291 | 41 | 311 | 3.94e-19 | 87.4 |
| MS.gene055336.t1 | AT1G68170 | 32.500 | 160 | 105 | 1 | 158 | 314 | 175 | 334 | 9.48e-19 | 87.0 |
| MS.gene055336.t1 | AT1G68170 | 32.500 | 160 | 105 | 1 | 158 | 314 | 165 | 324 | 1.05e-18 | 86.7 |
| MS.gene055336.t1 | AT3G45870 | 32.168 | 143 | 96 | 1 | 166 | 308 | 118 | 259 | 1.24e-18 | 85.9 |
| MS.gene055336.t1 | AT3G45870 | 32.168 | 143 | 96 | 1 | 166 | 308 | 193 | 334 | 2.70e-18 | 85.9 |
| MS.gene055336.t1 | AT5G45370 | 23.750 | 320 | 221 | 8 | 2 | 313 | 23 | 327 | 9.23e-18 | 84.0 |
| MS.gene055336.t1 | AT5G45370 | 23.301 | 309 | 190 | 7 | 2 | 308 | 23 | 286 | 1.06e-17 | 83.2 |
| MS.gene055336.t1 | AT4G01430 | 30.323 | 155 | 107 | 1 | 138 | 291 | 154 | 308 | 2.11e-17 | 82.4 |
| MS.gene055336.t1 | AT3G28070 | 28.877 | 187 | 120 | 5 | 161 | 345 | 55 | 230 | 2.15e-17 | 80.9 |
| MS.gene055336.t1 | AT3G28070 | 29.412 | 187 | 119 | 5 | 161 | 345 | 92 | 267 | 4.40e-17 | 80.5 |
| MS.gene055336.t1 | AT4G19185 | 24.159 | 327 | 225 | 7 | 2 | 308 | 24 | 347 | 1.09e-16 | 81.3 |
| MS.gene055336.t1 | AT3G28070 | 28.877 | 187 | 120 | 5 | 161 | 345 | 184 | 359 | 1.62e-16 | 80.1 |
| MS.gene055336.t1 | AT4G19185 | 31.250 | 144 | 98 | 1 | 165 | 308 | 127 | 269 | 1.90e-16 | 79.7 |
| MS.gene055336.t1 | AT5G40210 | 24.316 | 329 | 212 | 7 | 2 | 318 | 16 | 319 | 4.98e-16 | 78.6 |
| MS.gene055336.t1 | AT5G45370 | 27.568 | 185 | 118 | 4 | 138 | 308 | 62 | 244 | 1.78e-15 | 76.3 |
| MS.gene055336.t1 | AT5G45370 | 27.568 | 185 | 118 | 4 | 138 | 308 | 62 | 244 | 1.78e-15 | 76.3 |
| MS.gene055336.t1 | AT3G28080 | 28.859 | 149 | 104 | 2 | 166 | 313 | 60 | 207 | 3.46e-15 | 74.7 |
| MS.gene055336.t1 | AT3G28130 | 25.683 | 183 | 132 | 4 | 133 | 313 | 27 | 207 | 4.79e-15 | 73.9 |
| MS.gene055336.t1 | AT3G28080 | 28.859 | 149 | 104 | 2 | 166 | 313 | 97 | 244 | 7.57e-15 | 74.3 |
| MS.gene055336.t1 | AT3G28080 | 28.859 | 149 | 104 | 2 | 166 | 313 | 97 | 244 | 7.57e-15 | 74.3 |
| MS.gene055336.t1 | AT3G28080 | 28.859 | 149 | 104 | 2 | 166 | 313 | 97 | 244 | 7.57e-15 | 74.3 |
| MS.gene055336.t1 | AT3G28080 | 28.859 | 149 | 104 | 2 | 166 | 313 | 97 | 244 | 7.57e-15 | 74.3 |
| MS.gene055336.t1 | AT3G28130 | 25.683 | 183 | 132 | 4 | 133 | 313 | 66 | 246 | 9.90e-15 | 73.9 |
| MS.gene055336.t1 | AT3G28130 | 25.683 | 183 | 132 | 4 | 133 | 313 | 66 | 246 | 9.90e-15 | 73.9 |
| MS.gene055336.t1 | AT3G28100 | 26.705 | 176 | 119 | 4 | 166 | 340 | 186 | 352 | 1.86e-14 | 73.9 |
| MS.gene055336.t1 | AT3G28080 | 28.859 | 149 | 104 | 2 | 166 | 313 | 186 | 333 | 2.64e-14 | 73.6 |
| MS.gene055336.t1 | AT3G28130 | 22.185 | 302 | 218 | 7 | 23 | 313 | 37 | 332 | 3.14e-14 | 73.6 |
| MS.gene055336.t1 | AT3G28080 | 28.859 | 149 | 104 | 2 | 166 | 313 | 178 | 325 | 3.28e-14 | 73.6 |
| MS.gene055336.t1 | AT4G01450 | 28.710 | 310 | 184 | 9 | 24 | 315 | 35 | 325 | 4.75e-13 | 70.1 |
| MS.gene055336.t1 | AT3G45870 | 30.159 | 126 | 87 | 1 | 166 | 291 | 118 | 242 | 1.50e-12 | 67.4 |
| MS.gene055336.t1 | AT3G45870 | 30.159 | 126 | 87 | 1 | 166 | 291 | 118 | 242 | 1.50e-12 | 67.4 |
| MS.gene055336.t1 | AT3G45870 | 30.159 | 126 | 87 | 1 | 166 | 291 | 193 | 317 | 1.70e-12 | 68.2 |
| MS.gene055336.t1 | AT4G01450 | 27.622 | 286 | 170 | 9 | 24 | 291 | 35 | 301 | 1.13e-11 | 65.9 |
Find 65 sgRNAs with CRISPR-Local
Find 115 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCATTGTCCCCACTATTT+TGG | 0.190725 | 8.2:+83781550 | None:intergenic |
| ATCAATTCTTTGCTTCAATT+TGG | 0.217860 | 8.2:-83780989 | MS.gene055336:CDS |
| TTATTCTTGACCTCACTAAT+TGG | 0.247020 | 8.2:-83782131 | MS.gene055336:CDS |
| AATTGATCTTCCACACATTC+AGG | 0.277827 | 8.2:+83781005 | None:intergenic |
| AGGCTTGTATACTGTACTTT+GGG | 0.280415 | 8.2:-83780552 | MS.gene055336:CDS |
| ACTGTGTTGCCTGGTCAATT+TGG | 0.328526 | 8.2:-83781371 | MS.gene055336:CDS |
| AGAGTTTATATATGCAGGTT+TGG | 0.333917 | 8.2:-83782392 | MS.gene055336:CDS |
| TCTACATTATTTAGTAGCTT+TGG | 0.345668 | 8.2:+83781483 | None:intergenic |
| ATGTAATTTGTTAGCTTGAT+TGG | 0.346431 | 8.2:-83780593 | MS.gene055336:intron |
| GTTCTTCCAAATGATGAGTT+TGG | 0.347202 | 8.2:+83780411 | None:intergenic |
| GCTGTAAATGACAAGTAATT+AGG | 0.355735 | 8.2:+83781088 | None:intergenic |
| ATATATGCAGGTTTGGGTAT+TGG | 0.362080 | 8.2:-83782385 | MS.gene055336:CDS |
| GAGTTTATATATGCAGGTTT+GGG | 0.373910 | 8.2:-83782391 | MS.gene055336:CDS |
| TTATTGCCAAACTCATCATT+TGG | 0.381055 | 8.2:-83780417 | MS.gene055336:CDS |
| TTGATAGAGTTTATATATGC+AGG | 0.392453 | 8.2:-83782397 | MS.gene055336:CDS |
| CTTGCCATGATTGACTTTGA+AGG | 0.404722 | 8.2:+83781450 | None:intergenic |
| GGTGCAATTGGAATGATCAT+AGG | 0.408144 | 8.2:-83780572 | MS.gene055336:CDS |
| TTTGTAATAGCAGCCTTTGT+AGG | 0.408588 | 8.2:-83781717 | MS.gene055336:CDS |
| TCATTAATAATCATCAACTT+TGG | 0.411929 | 8.2:+83780485 | None:intergenic |
| AAGAACTATAGCCAAAATAG+TGG | 0.417858 | 8.2:-83781561 | MS.gene055336:CDS |
| TATTCTTGACCTCACTAATT+GGG | 0.424692 | 8.2:-83782130 | MS.gene055336:CDS |
| GTTAGCTTGATTGGTGCAAT+TGG | 0.428885 | 8.2:-83780584 | MS.gene055336:intron |
| CTATTGCATTGTTGAATTGA+AGG | 0.441515 | 8.2:-83781508 | MS.gene055336:CDS |
| TAGGCTTGTATACTGTACTT+TGG | 0.445695 | 8.2:-83780553 | MS.gene055336:CDS |
| TCTTTGAAATGCACCAAGCT+TGG | 0.450004 | 8.2:+83780812 | None:intergenic |
| CTAGTAGTGATAATGAGAAT+TGG | 0.451386 | 8.2:-83781422 | MS.gene055336:CDS |
| TATTGCATTGTTGAATTGAA+GGG | 0.455203 | 8.2:-83781507 | MS.gene055336:CDS |
| TTTCTTGACAGGAGAAACTC+TGG | 0.478361 | 8.2:-83782188 | MS.gene055336:intron |
| TTAGGATGGCTTGCATAAGC+TGG | 0.480462 | 8.2:+83781106 | None:intergenic |
| TTGAGTAATGTGGACTAAGC+AGG | 0.493281 | 8.2:+83780380 | None:intergenic |
| GATAATGAGAATTGGTTGCT+TGG | 0.497928 | 8.2:-83781414 | MS.gene055336:CDS |
| ATTATTAATGAGACAGAGGA+AGG | 0.498746 | 8.2:-83780473 | MS.gene055336:CDS |
| GCTATTACAAATGTAACTGC+TGG | 0.501198 | 8.2:+83781729 | None:intergenic |
| GTGGACTAAGCAGGTAATAG+AGG | 0.502105 | 8.2:+83780389 | None:intergenic |
| TGCTATCTTGTTGCTTCATG+AGG | 0.504097 | 8.2:-83780731 | MS.gene055336:CDS |
| GTCACAATTAATGTGAAAAG+AGG | 0.504645 | 8.2:+83780760 | None:intergenic |
| TTGTAATAGCAGCCTTTGTA+GGG | 0.505236 | 8.2:-83781716 | MS.gene055336:intron |
| CTACCTTCCAATAATGGCTA+TGG | 0.528631 | 8.2:-83782422 | None:intergenic |
| TATACCTTCAAAGTCAATCA+TGG | 0.529801 | 8.2:-83781454 | MS.gene055336:CDS |
| AGAACTATAGCCAAAATAGT+GGG | 0.530722 | 8.2:-83781560 | MS.gene055336:CDS |
| CTTCATGAGGAAATATACAT+TGG | 0.532240 | 8.2:-83780718 | MS.gene055336:CDS |
| CGGTACACAACAAATACCCT+AGG | 0.540219 | 8.2:+83782331 | None:intergenic |
| ATTACTTGTCATTTACAGCA+TGG | 0.541204 | 8.2:-83781084 | MS.gene055336:CDS |
| TGTAACTGCTGGAACAAGGT+TGG | 0.541791 | 8.2:+83781740 | None:intergenic |
| TTTGCAGGGTTTGAGCCCTA+GGG | 0.543458 | 8.2:-83782347 | MS.gene055336:CDS |
| GATGATTATTAATGAGACAG+AGG | 0.548661 | 8.2:-83780477 | MS.gene055336:CDS |
| GGGACAATGATATGTATAAG+TGG | 0.560003 | 8.2:-83781539 | MS.gene055336:CDS |
| AGCAACAGGAGCAAGAAGAA+TGG | 0.560164 | 8.2:+83782294 | None:intergenic |
| ATGAGGAAATATACATTGGA+AGG | 0.568135 | 8.2:-83780714 | MS.gene055336:intron |
| CAAAATGAGCCAAATTGACC+AGG | 0.569290 | 8.2:+83781362 | None:intergenic |
| TAACATTCTATCTCCAAGCT+TGG | 0.571991 | 8.2:-83780825 | MS.gene055336:CDS |
| CAAATGTAACTGCTGGAACA+AGG | 0.576764 | 8.2:+83781736 | None:intergenic |
| TGCTGGAACAAGGTTGGACA+TGG | 0.579813 | 8.2:+83781746 | None:intergenic |
| TCACAATTAATGTGAAAAGA+GGG | 0.589292 | 8.2:+83780761 | None:intergenic |
| GGCTTGTATACTGTACTTTG+GGG | 0.593434 | 8.2:-83780551 | MS.gene055336:CDS |
| AGTAATTACGTACCCTACAA+AGG | 0.606201 | 8.2:+83781704 | None:intergenic |
| GCTTGGTGCATTTCAAAGAG+AGG | 0.611097 | 8.2:-83780808 | MS.gene055336:CDS |
| TAAATGACAAGTAATTAGGA+TGG | 0.617968 | 8.2:+83781092 | None:intergenic |
| TTATTAATGAGACAGAGGAA+GGG | 0.651566 | 8.2:-83780472 | MS.gene055336:CDS |
| GGAAACTAACCCAATTAGTG+AGG | 0.656012 | 8.2:+83782121 | None:intergenic |
| GAATGGTTGCAATAGCATGA+CGG | 0.671471 | 8.2:+83782311 | None:intergenic |
| TTAAACATAGCAGAGAAGAG+AGG | 0.674281 | 8.2:+83780784 | None:intergenic |
| TTGAATCAGACCTGAATGTG+TGG | 0.674327 | 8.2:-83781015 | MS.gene055336:CDS |
| GAACTATAGCCAAAATAGTG+GGG | 0.681705 | 8.2:-83781559 | MS.gene055336:CDS |
| GGTACACAACAAATACCCTA+GGG | 0.684227 | 8.2:+83782332 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACATTGAATCAAAATTTATT+GGG | - | chr8.2:83780813-83780832 | MS.gene055336:CDS | 15.0% |
| !! | AGAAAAACTCTTTAAATTTA+AGG | + | chr8.2:83780649-83780668 | None:intergenic | 15.0% |
| !! | TAAAGAATAATTTCCTTATT+AGG | + | chr8.2:83780878-83780897 | None:intergenic | 15.0% |
| !! | TACATTGAATCAAAATTTAT+TGG | - | chr8.2:83780812-83780831 | MS.gene055336:CDS | 15.0% |
| !!! | AGTAGTAATTACATTTTATA+GGG | - | chr8.2:83781938-83781957 | MS.gene055336:intron | 15.0% |
| !!! | TAGTAGTAATTACATTTTAT+AGG | - | chr8.2:83781937-83781956 | MS.gene055336:intron | 15.0% |
| !! | AATACTATTATACTACAGAA+TGG | - | chr8.2:83781197-83781216 | MS.gene055336:intron | 20.0% |
| !! | ATAAATTAATACATCATCAG+TGG | - | chr8.2:83781905-83781924 | MS.gene055336:intron | 20.0% |
| !! | ATACCCTCAAAAAATAAATT+TGG | + | chr8.2:83781008-83781027 | None:intergenic | 20.0% |
| !! | ATATTATTATTACCAGAGAA+TGG | + | chr8.2:83780706-83780725 | None:intergenic | 20.0% |
| !! | CTTATCTCAAATTGAATTAT+AGG | - | chr8.2:83782154-83782173 | MS.gene055336:CDS | 20.0% |
| !! | TACCCTCAAAAAATAAATTT+GGG | + | chr8.2:83781007-83781026 | None:intergenic | 20.0% |
| !! | TCATAAAATCTTACTACTTT+AGG | - | chr8.2:83780944-83780963 | MS.gene055336:intron | 20.0% |
| !! | TCATTAATAATCATCAACTT+TGG | + | chr8.2:83782321-83782340 | None:intergenic | 20.0% |
| !! | TGTAATTACTACTACTAATT+AGG | + | chr8.2:83781931-83781950 | None:intergenic | 20.0% |
| !!! | CGAATGTGTTTTTTAATTAT+TGG | - | chr8.2:83781163-83781182 | MS.gene055336:intron | 20.0% |
| !!! | TATTTCTTTTTTTTCTTGAC+AGG | - | chr8.2:83780604-83780623 | MS.gene055336:intron | 20.0% |
| !!! | TTCCCAAATTTATTTTTTGA+GGG | - | chr8.2:83781002-83781021 | MS.gene055336:CDS | 20.0% |
| !!! | TTTCCCAAATTTATTTTTTG+AGG | - | chr8.2:83781001-83781020 | MS.gene055336:CDS | 20.0% |
| ! | ATCAATTCTTTGCTTCAATT+TGG | - | chr8.2:83781814-83781833 | MS.gene055336:intron | 25.0% |
| ! | CATATTTACACTACTCATTA+CGG | - | chr8.2:83780731-83780750 | MS.gene055336:CDS | 25.0% |
| ! | TAAATGACAAGTAATTAGGA+TGG | + | chr8.2:83781714-83781733 | None:intergenic | 25.0% |
| ! | TATATGTGTCATAATGTACT+AGG | - | chr8.2:83781507-83781526 | MS.gene055336:CDS | 25.0% |
| ! | TATCATATTATACTTTCCTC+AGG | - | chr8.2:83781672-83781691 | MS.gene055336:intron | 25.0% |
| ! | TATTGCATTGTTGAATTGAA+GGG | - | chr8.2:83781296-83781315 | MS.gene055336:intron | 25.0% |
| ! | TCACAATTAATGTGAAAAGA+GGG | + | chr8.2:83782045-83782064 | None:intergenic | 25.0% |
| ! | TCTACATTATTTAGTAGCTT+TGG | + | chr8.2:83781323-83781342 | None:intergenic | 25.0% |
| ! | TTGATAGAGTTTATATATGC+AGG | - | chr8.2:83780406-83780425 | MS.gene055336:CDS | 25.0% |
| !! | TACATTTTATAGGGAATCAT+GGG | - | chr8.2:83781947-83781966 | MS.gene055336:intron | 25.0% |
| !! | TTACATTTTATAGGGAATCA+TGG | - | chr8.2:83781946-83781965 | MS.gene055336:intron | 25.0% |
| !!! | ACAAGAATTGTATTTTTGCA+GGG | - | chr8.2:83780442-83780461 | MS.gene055336:CDS | 25.0% |
| !!! | ATGTAATTTGTTAGCTTGAT+TGG | - | chr8.2:83782210-83782229 | MS.gene055336:intron | 25.0% |
| AAGAACTATAGCCAAAATAG+TGG | - | chr8.2:83781242-83781261 | MS.gene055336:intron | 30.0% | |
| AGAACTATAGCCAAAATAGT+GGG | - | chr8.2:83781243-83781262 | MS.gene055336:intron | 30.0% | |
| AGAGTTTATATATGCAGGTT+TGG | - | chr8.2:83780411-83780430 | MS.gene055336:CDS | 30.0% | |
| ATAAAGCAATGAAAGAGAAG+TGG | + | chr8.2:83780564-83780583 | None:intergenic | 30.0% | |
| ATGAGGAAATATACATTGGA+AGG | - | chr8.2:83782089-83782108 | MS.gene055336:intron | 30.0% | |
| ATTATTAATGAGACAGAGGA+AGG | - | chr8.2:83782330-83782349 | MS.gene055336:CDS | 30.0% | |
| CTATTGCATTGTTGAATTGA+AGG | - | chr8.2:83781295-83781314 | MS.gene055336:intron | 30.0% | |
| CTCTTTAAGCATTCCTAATA+AGG | - | chr8.2:83780862-83780881 | MS.gene055336:intron | 30.0% | |
| CTTCATGAGGAAATATACAT+TGG | - | chr8.2:83782085-83782104 | MS.gene055336:intron | 30.0% | |
| GAGTTTATATATGCAGGTTT+GGG | - | chr8.2:83780412-83780431 | MS.gene055336:CDS | 30.0% | |
| GATGATTATTAATGAGACAG+AGG | - | chr8.2:83782326-83782345 | MS.gene055336:CDS | 30.0% | |
| GCTGTAAATGACAAGTAATT+AGG | + | chr8.2:83781718-83781737 | None:intergenic | 30.0% | |
| GTCACAATTAATGTGAAAAG+AGG | + | chr8.2:83782046-83782065 | None:intergenic | 30.0% | |
| TATACCTTCAAAGTCAATCA+TGG | - | chr8.2:83781349-83781368 | MS.gene055336:intron | 30.0% | |
| TATTCTTGACCTCACTAATT+GGG | - | chr8.2:83780673-83780692 | MS.gene055336:intron | 30.0% | |
| TTATTAATGAGACAGAGGAA+GGG | - | chr8.2:83782331-83782350 | MS.gene055336:CDS | 30.0% | |
| TTATTCTTGACCTCACTAAT+TGG | - | chr8.2:83780672-83780691 | MS.gene055336:intron | 30.0% | |
| TTATTGCCAAACTCATCATT+TGG | - | chr8.2:83782386-83782405 | MS.gene055336:CDS | 30.0% | |
| ! | ATTACTTGTCATTTACAGCA+TGG | - | chr8.2:83781719-83781738 | MS.gene055336:CDS | 30.0% |
| ! | CTAGTAGTGATAATGAGAAT+TGG | - | chr8.2:83781381-83781400 | MS.gene055336:CDS | 30.0% |
| ! | TGATTTGTGTTATCATGTCA+TGG | - | chr8.2:83780769-83780788 | MS.gene055336:CDS | 30.0% |
| ! | TGCATTTTATATGCAGTATG+TGG | - | chr8.2:83781838-83781857 | MS.gene055336:intron | 30.0% |
| ! | TGTCATAATGTACTAGGTTT+TGG | - | chr8.2:83781513-83781532 | MS.gene055336:CDS | 30.0% |
| !! | CACAAGAATTGTATTTTTGC+AGG | - | chr8.2:83780441-83780460 | MS.gene055336:CDS | 30.0% |
| AATTGATCTTCCACACATTC+AGG | + | chr8.2:83781801-83781820 | None:intergenic | 35.0% | |
| AGGCTTGTATACTGTACTTT+GGG | - | chr8.2:83782251-83782270 | MS.gene055336:intron | 35.0% | |
| AGTAATTACGTACCCTACAA+AGG | + | chr8.2:83781102-83781121 | None:intergenic | 35.0% | |
| ATATATGCAGGTTTGGGTAT+TGG | - | chr8.2:83780418-83780437 | MS.gene055336:CDS | 35.0% | |
| GAACTATAGCCAAAATAGTG+GGG | - | chr8.2:83781244-83781263 | MS.gene055336:intron | 35.0% | |
| GATAATGAGAATTGGTTGCT+TGG | - | chr8.2:83781389-83781408 | MS.gene055336:CDS | 35.0% | |
| GCTATTACAAATGTAACTGC+TGG | + | chr8.2:83781077-83781096 | None:intergenic | 35.0% | |
| GGGACAATGATATGTATAAG+TGG | - | chr8.2:83781264-83781283 | MS.gene055336:intron | 35.0% | |
| GTTCTTCCAAATGATGAGTT+TGG | + | chr8.2:83782395-83782414 | None:intergenic | 35.0% | |
| TAACATTCTATCTCCAAGCT+TGG | - | chr8.2:83781978-83781997 | MS.gene055336:intron | 35.0% | |
| TACCCTGAAAAATAAGCAAC+AGG | + | chr8.2:83780526-83780545 | None:intergenic | 35.0% | |
| TAGGCTTGTATACTGTACTT+TGG | - | chr8.2:83782250-83782269 | MS.gene055336:intron | 35.0% | |
| TTAAACATAGCAGAGAAGAG+AGG | + | chr8.2:83782022-83782041 | None:intergenic | 35.0% | |
| TTGTAATAGCAGCCTTTGTA+GGG | - | chr8.2:83781087-83781106 | MS.gene055336:CDS | 35.0% | |
| TTTGTAATAGCAGCCTTTGT+AGG | - | chr8.2:83781086-83781105 | MS.gene055336:CDS | 35.0% | |
| ! | CTTGGATGTCTTTGTCTTTT+AGG | - | chr8.2:83781407-83781426 | MS.gene055336:CDS | 35.0% |
| ! | TATCATTGTCCCCACTATTT+TGG | + | chr8.2:83781256-83781275 | None:intergenic | 35.0% |
| !! | CTCCTGTTGCTTATTTTTCA+GGG | - | chr8.2:83780521-83780540 | MS.gene055336:CDS | 35.0% |
| CAAAATGAGCCAAATTGACC+AGG | + | chr8.2:83781444-83781463 | None:intergenic | 40.0% | |
| CAAATGTAACTGCTGGAACA+AGG | + | chr8.2:83781070-83781089 | None:intergenic | 40.0% | |
| GAATGGTTGCAATAGCATGA+CGG | + | chr8.2:83780495-83780514 | None:intergenic | 40.0% | |
| GGAAACTAACCCAATTAGTG+AGG | + | chr8.2:83780685-83780704 | None:intergenic | 40.0% | |
| GGCTTGTATACTGTACTTTG+GGG | - | chr8.2:83782252-83782271 | MS.gene055336:intron | 40.0% | |
| GGTACACAACAAATACCCTA+GGG | + | chr8.2:83780474-83780493 | None:intergenic | 40.0% | |
| GGTGCAATTGGAATGATCAT+AGG | - | chr8.2:83782231-83782250 | MS.gene055336:intron | 40.0% | |
| TTGAATCAGACCTGAATGTG+TGG | - | chr8.2:83781788-83781807 | MS.gene055336:intron | 40.0% | |
| TTTCTTGACAGGAGAAACTC+TGG | - | chr8.2:83780615-83780634 | MS.gene055336:intron | 40.0% | |
| ! | CTTGCCATGATTGACTTTGA+AGG | + | chr8.2:83781356-83781375 | None:intergenic | 40.0% |
| ! | GTTAGCTTGATTGGTGCAAT+TGG | - | chr8.2:83782219-83782238 | MS.gene055336:intron | 40.0% |
| ! | TGCTATCTTGTTGCTTCATG+AGG | - | chr8.2:83782072-83782091 | MS.gene055336:intron | 40.0% |
| !! | GCTCCTGTTGCTTATTTTTC+AGG | - | chr8.2:83780520-83780539 | MS.gene055336:CDS | 40.0% |
| !! | GTCAATTTGGCTCATTTTGC+AGG | - | chr8.2:83781445-83781464 | MS.gene055336:CDS | 40.0% |
| !! | TCTTTGAAATGCACCAAGCT+TGG | + | chr8.2:83781994-83782013 | None:intergenic | 40.0% |
| !! | TTGGGTTAGTTTCCATTCTC+TGG | - | chr8.2:83780691-83780710 | MS.gene055336:intron | 40.0% |
| !! | TTTTAGGAAACTGTGTTGCC+TGG | - | chr8.2:83781423-83781442 | MS.gene055336:CDS | 40.0% |
| ACTGTGTTGCCTGGTCAATT+TGG | - | chr8.2:83781432-83781451 | MS.gene055336:CDS | 45.0% | |
| AGCAACAGGAGCAAGAAGAA+TGG | + | chr8.2:83780512-83780531 | None:intergenic | 45.0% | |
| CGGTACACAACAAATACCCT+AGG | + | chr8.2:83780475-83780494 | None:intergenic | 45.0% | |
| TGTAACTGCTGGAACAAGGT+TGG | + | chr8.2:83781066-83781085 | None:intergenic | 45.0% | |
| ! | TTAGGATGGCTTGCATAAGC+TGG | + | chr8.2:83781700-83781719 | None:intergenic | 45.0% |
| !! | GCTTGGTGCATTTCAAAGAG+AGG | - | chr8.2:83781995-83782014 | MS.gene055336:intron | 45.0% |
| AAATGTTAACGAGTGCCCCC+GGG | + | chr8.2:83780984-83781003 | None:intergenic | 50.0% | |
| CTTGCATAAGCTGGAACCTG+AGG | + | chr8.2:83781691-83781710 | None:intergenic | 50.0% | |
| GAAATGTTAACGAGTGCCCC+CGG | + | chr8.2:83780985-83781004 | None:intergenic | 50.0% | |
| TGCTGGAACAAGGTTGGACA+TGG | + | chr8.2:83781060-83781079 | None:intergenic | 50.0% | |
| TTTGCAGGGTTTGAGCCCTA+GGG | - | chr8.2:83780456-83780475 | MS.gene055336:CDS | 50.0% | |
| ! | TTTTGCAGGGTTTGAGCCCT+AGG | - | chr8.2:83780455-83780474 | MS.gene055336:CDS | 50.0% |
| !! | AATGCTTAAAGAGTGCCCCG+GGG | + | chr8.2:83780855-83780874 | None:intergenic | 50.0% |
| !! | GAATGCTTAAAGAGTGCCCC+GGG | + | chr8.2:83780856-83780875 | None:intergenic | 50.0% |
| !! | GGAATGCTTAAAGAGTGCCC+CGG | + | chr8.2:83780857-83780876 | None:intergenic | 50.0% |
| !! | TAGGTGCTTAAAGAGTGCCC+CGG | - | chr8.2:83780963-83780982 | MS.gene055336:intron | 50.0% |
| AATGTTAACGAGTGCCCCCG+GGG | + | chr8.2:83780983-83781002 | None:intergenic | 55.0% | |
| TCTTGTTAACGAGTGCCCCC+GGG | - | chr8.2:83780836-83780855 | MS.gene055336:CDS | 55.0% | |
| ! | GTCTTGTTAACGAGTGCCCC+CGG | - | chr8.2:83780835-83780854 | MS.gene055336:CDS | 55.0% |
| !! | AGGTGCTTAAAGAGTGCCCC+GGG | - | chr8.2:83780964-83780983 | MS.gene055336:intron | 55.0% |
| !! | ATGCTTAAAGAGTGCCCCGG+GGG | + | chr8.2:83780854-83780873 | None:intergenic | 55.0% |
| CTTGTTAACGAGTGCCCCCG+GGG | - | chr8.2:83780837-83780856 | MS.gene055336:CDS | 60.0% | |
| !! | GGTGCTTAAAGAGTGCCCCG+GGG | - | chr8.2:83780965-83780984 | MS.gene055336:intron | 60.0% |
| !! | GTGCTTAAAGAGTGCCCCGG+GGG | - | chr8.2:83780966-83780985 | MS.gene055336:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 83780394 | 83782431 | 83780394 | ID=MS.gene055336 |
| chr8.2 | mRNA | 83780394 | 83782431 | 83780394 | ID=MS.gene055336.t1;Parent=MS.gene055336 |
| chr8.2 | exon | 83782279 | 83782431 | 83782279 | ID=MS.gene055336.t1.exon1;Parent=MS.gene055336.t1 |
| chr8.2 | CDS | 83782279 | 83782431 | 83782279 | ID=cds.MS.gene055336.t1;Parent=MS.gene055336.t1 |
| chr8.2 | exon | 83782127 | 83782199 | 83782127 | ID=MS.gene055336.t1.exon2;Parent=MS.gene055336.t1 |
| chr8.2 | CDS | 83782127 | 83782199 | 83782127 | ID=cds.MS.gene055336.t1;Parent=MS.gene055336.t1 |
| chr8.2 | exon | 83781717 | 83781802 | 83781717 | ID=MS.gene055336.t1.exon3;Parent=MS.gene055336.t1 |
| chr8.2 | CDS | 83781717 | 83781802 | 83781717 | ID=cds.MS.gene055336.t1;Parent=MS.gene055336.t1 |
| chr8.2 | exon | 83781359 | 83781610 | 83781359 | ID=MS.gene055336.t1.exon4;Parent=MS.gene055336.t1 |
| chr8.2 | CDS | 83781359 | 83781610 | 83781359 | ID=cds.MS.gene055336.t1;Parent=MS.gene055336.t1 |
| chr8.2 | exon | 83780973 | 83781131 | 83780973 | ID=MS.gene055336.t1.exon5;Parent=MS.gene055336.t1 |
| chr8.2 | CDS | 83780973 | 83781131 | 83780973 | ID=cds.MS.gene055336.t1;Parent=MS.gene055336.t1 |
| chr8.2 | exon | 83780715 | 83780866 | 83780715 | ID=MS.gene055336.t1.exon6;Parent=MS.gene055336.t1 |
| chr8.2 | CDS | 83780715 | 83780866 | 83780715 | ID=cds.MS.gene055336.t1;Parent=MS.gene055336.t1 |
| chr8.2 | exon | 83780394 | 83780601 | 83780394 | ID=MS.gene055336.t1.exon7;Parent=MS.gene055336.t1 |
| chr8.2 | CDS | 83780394 | 83780601 | 83780394 | ID=cds.MS.gene055336.t1;Parent=MS.gene055336.t1 |
| Gene Sequence |
| Protein sequence |
