Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62756.t1 | XP_003626706.2 | 93.6 | 343 | 18 | 4 | 1 | 343 | 36 | 374 | 1.20E-166 | 595.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62756.t1 | Q9M0B8 | 51.3 | 343 | 156 | 4 | 1 | 341 | 24 | 357 | 1.0e-89 | 331.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62756.t1 | G7LBL0 | 93.6 | 343 | 18 | 4 | 1 | 343 | 36 | 374 | 8.6e-167 | 595.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055336 | MS.gene62756 | 0.849919 | 2.37E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene007962 | MS.gene62756 | PPI |
| MS.gene33586 | MS.gene62756 | PPI |
| MS.gene62756 | MS.gene99888 | PPI |
| MS.gene62998 | MS.gene62756 | PPI |
| MS.gene026616 | MS.gene62756 | PPI |
| MS.gene57955 | MS.gene62756 | PPI |
| MS.gene62756 | MS.gene012466 | PPI |
| MS.gene65952 | MS.gene62756 | PPI |
| MS.gene018396 | MS.gene62756 | PPI |
| MS.gene035645 | MS.gene62756 | PPI |
| MS.gene031882 | MS.gene62756 | PPI |
| MS.gene62756 | MS.gene039955 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62756.t1 | MTR_8g006120 | 93.586 | 343 | 18 | 4 | 1 | 343 | 36 | 374 | 0.0 | 586 |
| MS.gene62756.t1 | MTR_2g065550 | 73.392 | 342 | 82 | 7 | 1 | 341 | 36 | 369 | 1.65e-171 | 481 |
| MS.gene62756.t1 | MTR_8g006010 | 69.501 | 341 | 85 | 6 | 1 | 341 | 36 | 357 | 2.73e-160 | 453 |
| MS.gene62756.t1 | MTR_8g006050 | 68.639 | 338 | 83 | 7 | 6 | 341 | 25 | 341 | 1.58e-155 | 440 |
| MS.gene62756.t1 | MTR_8g006090 | 73.231 | 325 | 84 | 2 | 1 | 325 | 37 | 358 | 1.19e-153 | 436 |
| MS.gene62756.t1 | MTR_8g006090 | 75.912 | 274 | 64 | 1 | 1 | 274 | 37 | 308 | 2.64e-134 | 385 |
| MS.gene62756.t1 | MTR_8g006090 | 72.242 | 281 | 75 | 2 | 45 | 325 | 1 | 278 | 2.90e-125 | 360 |
| MS.gene62756.t1 | MTR_4g129650 | 49.563 | 343 | 150 | 7 | 1 | 341 | 34 | 355 | 3.35e-110 | 326 |
| MS.gene62756.t1 | MTR_8g006090 | 76.712 | 219 | 49 | 1 | 1 | 219 | 37 | 253 | 1.40e-100 | 298 |
| MS.gene62756.t1 | MTR_4g129650 | 47.584 | 269 | 120 | 6 | 73 | 341 | 1 | 248 | 2.60e-79 | 243 |
| MS.gene62756.t1 | MTR_6g081840 | 39.275 | 331 | 194 | 3 | 1 | 329 | 36 | 361 | 4.60e-73 | 231 |
| MS.gene62756.t1 | MTR_8g006090 | 76.000 | 175 | 40 | 1 | 45 | 219 | 1 | 173 | 9.19e-73 | 225 |
| MS.gene62756.t1 | MTR_3g112480 | 37.845 | 362 | 184 | 7 | 1 | 341 | 46 | 387 | 6.45e-71 | 226 |
| MS.gene62756.t1 | MTR_2g016710 | 37.224 | 317 | 187 | 3 | 1 | 317 | 34 | 338 | 1.23e-66 | 214 |
| MS.gene62756.t1 | MTR_1g023180 | 35.435 | 333 | 193 | 3 | 1 | 317 | 47 | 373 | 2.44e-65 | 212 |
| MS.gene62756.t1 | MTR_1g074120 | 38.689 | 305 | 181 | 3 | 1 | 304 | 42 | 341 | 4.61e-65 | 210 |
| MS.gene62756.t1 | MTR_1g073990 | 40.673 | 327 | 182 | 6 | 1 | 326 | 42 | 357 | 5.90e-65 | 209 |
| MS.gene62756.t1 | MTR_1g074070 | 37.377 | 305 | 185 | 3 | 1 | 304 | 42 | 341 | 2.31e-64 | 208 |
| MS.gene62756.t1 | MTR_1g074160 | 38.689 | 305 | 181 | 4 | 1 | 304 | 39 | 338 | 3.43e-64 | 207 |
| MS.gene62756.t1 | MTR_3g112480 | 37.539 | 317 | 164 | 5 | 43 | 341 | 32 | 332 | 4.81e-64 | 206 |
| MS.gene62756.t1 | MTR_8g041390 | 34.535 | 333 | 198 | 7 | 1 | 317 | 39 | 367 | 3.00e-63 | 206 |
| MS.gene62756.t1 | MTR_1g038560 | 35.647 | 317 | 195 | 3 | 1 | 317 | 29 | 336 | 7.76e-63 | 203 |
| MS.gene62756.t1 | MTR_1g070175 | 35.314 | 303 | 189 | 3 | 1 | 303 | 42 | 337 | 1.06e-62 | 204 |
| MS.gene62756.t1 | MTR_3g012420 | 37.942 | 311 | 183 | 6 | 1 | 308 | 43 | 346 | 1.50e-62 | 204 |
| MS.gene62756.t1 | MTR_2g007960 | 36.893 | 309 | 176 | 4 | 1 | 297 | 38 | 339 | 1.73e-62 | 204 |
| MS.gene62756.t1 | MTR_1g114210 | 35.621 | 306 | 193 | 2 | 1 | 306 | 37 | 338 | 5.84e-61 | 199 |
| MS.gene62756.t1 | MTR_2g102340 | 37.919 | 298 | 180 | 3 | 1 | 297 | 38 | 331 | 5.06e-60 | 197 |
| MS.gene62756.t1 | MTR_1g051120 | 35.423 | 319 | 198 | 5 | 1 | 317 | 42 | 354 | 6.00e-60 | 196 |
| MS.gene62756.t1 | MTR_0096s0100 | 37.374 | 297 | 181 | 3 | 1 | 296 | 44 | 336 | 1.00e-59 | 196 |
| MS.gene62756.t1 | MTR_1g068630 | 35.354 | 297 | 186 | 4 | 1 | 296 | 41 | 332 | 7.11e-59 | 194 |
| MS.gene62756.t1 | MTR_1g074020 | 37.217 | 309 | 188 | 3 | 1 | 308 | 39 | 342 | 8.25e-59 | 193 |
| MS.gene62756.t1 | MTR_3g072500 | 32.941 | 340 | 214 | 5 | 1 | 329 | 46 | 382 | 8.43e-59 | 194 |
| MS.gene62756.t1 | MTR_1g030580 | 35.843 | 332 | 201 | 5 | 1 | 327 | 42 | 366 | 9.95e-59 | 194 |
| MS.gene62756.t1 | MTR_6g036450 | 35.370 | 311 | 185 | 5 | 1 | 304 | 42 | 343 | 5.14e-58 | 192 |
| MS.gene62756.t1 | MTR_3g072530 | 35.692 | 325 | 191 | 6 | 1 | 317 | 40 | 354 | 6.53e-58 | 191 |
| MS.gene62756.t1 | MTR_1g030600 | 37.025 | 316 | 185 | 4 | 1 | 309 | 44 | 352 | 1.15e-57 | 191 |
| MS.gene62756.t1 | MTR_3g095420 | 33.663 | 303 | 198 | 2 | 1 | 300 | 33 | 335 | 7.28e-57 | 189 |
| MS.gene62756.t1 | MTR_2g007990 | 34.700 | 317 | 181 | 5 | 1 | 306 | 41 | 342 | 1.10e-56 | 189 |
| MS.gene62756.t1 | MTR_2g027030 | 35.577 | 312 | 190 | 4 | 1 | 309 | 38 | 341 | 3.01e-56 | 187 |
| MS.gene62756.t1 | MTR_4g106720 | 35.197 | 304 | 178 | 3 | 1 | 296 | 38 | 330 | 6.68e-56 | 186 |
| MS.gene62756.t1 | MTR_2g016710 | 36.861 | 274 | 168 | 2 | 1 | 274 | 34 | 302 | 1.28e-55 | 184 |
| MS.gene62756.t1 | MTR_2g007970 | 36.364 | 319 | 192 | 5 | 1 | 317 | 38 | 347 | 2.95e-55 | 185 |
| MS.gene62756.t1 | MTR_5g021160 | 32.817 | 323 | 206 | 3 | 1 | 315 | 33 | 352 | 3.00e-55 | 184 |
| MS.gene62756.t1 | MTR_7g100050 | 35.354 | 297 | 188 | 3 | 1 | 296 | 39 | 332 | 8.75e-55 | 184 |
| MS.gene62756.t1 | MTR_3g095460 | 33.443 | 305 | 201 | 2 | 1 | 304 | 31 | 334 | 8.85e-55 | 182 |
| MS.gene62756.t1 | MTR_3g072560 | 36.364 | 297 | 182 | 3 | 1 | 296 | 44 | 334 | 1.59e-53 | 181 |
| MS.gene62756.t1 | MTR_3g095450 | 34.713 | 314 | 180 | 5 | 1 | 300 | 31 | 333 | 6.13e-53 | 178 |
| MS.gene62756.t1 | MTR_3g090550 | 33.645 | 321 | 201 | 6 | 1 | 317 | 32 | 344 | 2.26e-52 | 176 |
| MS.gene62756.t1 | MTR_7g111830 | 32.248 | 307 | 192 | 4 | 1 | 297 | 33 | 333 | 2.56e-52 | 177 |
| MS.gene62756.t1 | MTR_3g112480 | 36.232 | 276 | 142 | 5 | 84 | 341 | 1 | 260 | 4.39e-52 | 173 |
| MS.gene62756.t1 | MTR_8g092650 | 34.884 | 301 | 189 | 3 | 1 | 296 | 31 | 329 | 5.72e-52 | 176 |
| MS.gene62756.t1 | MTR_4g094340 | 33.333 | 321 | 206 | 4 | 1 | 319 | 35 | 349 | 7.29e-52 | 175 |
| MS.gene62756.t1 | MTR_4g094340 | 33.333 | 321 | 206 | 4 | 1 | 319 | 53 | 367 | 1.06e-51 | 176 |
| MS.gene62756.t1 | MTR_4g094342 | 34.014 | 294 | 190 | 2 | 1 | 291 | 39 | 331 | 3.02e-51 | 174 |
| MS.gene62756.t1 | MTR_3g072500 | 33.929 | 280 | 172 | 4 | 61 | 329 | 2 | 279 | 3.91e-51 | 172 |
| MS.gene62756.t1 | MTR_2g007260 | 35.065 | 308 | 182 | 4 | 1 | 297 | 40 | 340 | 2.40e-50 | 173 |
| MS.gene62756.t1 | MTR_4g094352 | 34.195 | 348 | 214 | 5 | 1 | 338 | 38 | 380 | 6.67e-50 | 171 |
| MS.gene62756.t1 | MTR_5g034990 | 34.667 | 300 | 189 | 3 | 1 | 300 | 40 | 332 | 3.95e-49 | 168 |
| MS.gene62756.t1 | MTR_4g094340 | 35.338 | 266 | 166 | 3 | 53 | 316 | 19 | 280 | 1.29e-48 | 165 |
| MS.gene62756.t1 | MTR_0103s0090 | 35.000 | 300 | 191 | 2 | 1 | 300 | 37 | 332 | 1.62e-48 | 167 |
| MS.gene62756.t1 | MTR_3g072520 | 35.017 | 297 | 191 | 2 | 1 | 296 | 35 | 330 | 8.57e-48 | 166 |
| MS.gene62756.t1 | MTR_4g094362 | 34.228 | 298 | 191 | 3 | 1 | 296 | 40 | 334 | 1.39e-45 | 160 |
| MS.gene62756.t1 | MTR_4g094360 | 34.304 | 309 | 193 | 4 | 1 | 306 | 40 | 341 | 2.52e-45 | 159 |
| MS.gene62756.t1 | MTR_1g030400 | 28.713 | 303 | 207 | 4 | 1 | 297 | 33 | 332 | 6.80e-45 | 157 |
| MS.gene62756.t1 | MTR_3g095440 | 32.298 | 322 | 205 | 4 | 1 | 317 | 31 | 344 | 3.17e-44 | 155 |
| MS.gene62756.t1 | MTR_3g019050 | 32.526 | 289 | 191 | 3 | 10 | 297 | 53 | 338 | 1.18e-43 | 155 |
| MS.gene62756.t1 | MTR_8g092650 | 34.802 | 227 | 142 | 2 | 75 | 296 | 26 | 251 | 1.52e-43 | 151 |
| MS.gene62756.t1 | MTR_5g021160 | 30.483 | 269 | 181 | 1 | 53 | 315 | 1 | 269 | 1.53e-43 | 152 |
| MS.gene62756.t1 | MTR_5g025370 | 30.612 | 343 | 214 | 6 | 1 | 321 | 36 | 376 | 2.16e-43 | 154 |
| MS.gene62756.t1 | MTR_5g025290 | 32.692 | 312 | 189 | 7 | 1 | 296 | 37 | 343 | 4.83e-43 | 153 |
| MS.gene62756.t1 | MTR_5g025290 | 32.692 | 312 | 189 | 7 | 1 | 296 | 65 | 371 | 5.10e-43 | 154 |
| MS.gene62756.t1 | MTR_0103s0090 | 35.537 | 242 | 153 | 1 | 59 | 300 | 3 | 241 | 1.80e-42 | 149 |
| MS.gene62756.t1 | MTR_5g068790 | 31.849 | 292 | 195 | 3 | 8 | 297 | 51 | 340 | 6.06e-42 | 150 |
| MS.gene62756.t1 | MTR_5g069040 | 30.717 | 293 | 199 | 3 | 8 | 297 | 51 | 342 | 4.37e-41 | 148 |
| MS.gene62756.t1 | MTR_4g094360 | 34.375 | 256 | 163 | 2 | 52 | 306 | 43 | 294 | 1.01e-40 | 146 |
| MS.gene62756.t1 | MTR_6g007760 | 34.643 | 280 | 172 | 4 | 1 | 276 | 37 | 309 | 1.28e-40 | 145 |
| MS.gene62756.t1 | MTR_5g025340 | 30.548 | 347 | 215 | 7 | 1 | 325 | 36 | 378 | 1.87e-40 | 146 |
| MS.gene62756.t1 | MTR_5g034980 | 29.966 | 297 | 203 | 3 | 1 | 296 | 33 | 325 | 2.09e-40 | 145 |
| MS.gene62756.t1 | MTR_5g034910 | 31.290 | 310 | 208 | 3 | 1 | 309 | 33 | 338 | 7.06e-40 | 144 |
| MS.gene62756.t1 | MTR_5g089390 | 30.375 | 293 | 186 | 4 | 10 | 297 | 49 | 328 | 1.69e-39 | 143 |
| MS.gene62756.t1 | MTR_5g025400 | 30.031 | 323 | 207 | 5 | 1 | 306 | 37 | 357 | 2.21e-39 | 143 |
| MS.gene62756.t1 | MTR_5g025330 | 29.747 | 316 | 205 | 4 | 1 | 301 | 35 | 348 | 8.39e-39 | 145 |
| MS.gene62756.t1 | MTR_8g072350 | 29.677 | 310 | 201 | 5 | 1 | 296 | 35 | 341 | 1.45e-38 | 141 |
| MS.gene62756.t1 | MTR_5g034930 | 30.976 | 297 | 200 | 3 | 1 | 296 | 32 | 324 | 1.77e-38 | 140 |
| MS.gene62756.t1 | MTR_6g007743 | 30.323 | 310 | 205 | 4 | 1 | 307 | 38 | 339 | 7.16e-38 | 139 |
| MS.gene62756.t1 | MTR_4g094360 | 33.213 | 277 | 179 | 3 | 1 | 274 | 40 | 313 | 1.11e-36 | 134 |
| MS.gene62756.t1 | MTR_1g074160 | 36.000 | 225 | 138 | 4 | 1 | 224 | 39 | 258 | 3.95e-36 | 132 |
| MS.gene62756.t1 | MTR_6g007747 | 34.768 | 302 | 185 | 4 | 1 | 300 | 38 | 329 | 1.56e-35 | 132 |
| MS.gene62756.t1 | MTR_1g014510 | 29.104 | 268 | 189 | 1 | 29 | 296 | 66 | 332 | 1.24e-34 | 132 |
| MS.gene62756.t1 | MTR_5g012650 | 29.677 | 310 | 203 | 6 | 1 | 303 | 34 | 335 | 3.66e-34 | 129 |
| MS.gene62756.t1 | MTR_3g072500 | 33.178 | 214 | 138 | 3 | 1 | 212 | 46 | 256 | 5.18e-34 | 126 |
| MS.gene62756.t1 | MTR_5g021160 | 31.858 | 226 | 149 | 2 | 1 | 224 | 33 | 255 | 1.15e-33 | 125 |
| MS.gene62756.t1 | MTR_6g007750 | 32.119 | 302 | 198 | 4 | 1 | 300 | 38 | 334 | 1.82e-33 | 127 |
| MS.gene62756.t1 | MTR_2g102340 | 36.620 | 213 | 130 | 3 | 1 | 212 | 64 | 272 | 2.09e-32 | 123 |
| MS.gene62756.t1 | MTR_6g007753 | 31.488 | 289 | 190 | 3 | 14 | 300 | 333 | 615 | 6.90e-31 | 123 |
| MS.gene62756.t1 | MTR_6g007753 | 30.040 | 253 | 163 | 4 | 88 | 334 | 84 | 328 | 3.96e-25 | 106 |
| MS.gene62756.t1 | MTR_6g007740 | 29.355 | 310 | 208 | 4 | 1 | 307 | 38 | 339 | 4.79e-30 | 119 |
| MS.gene62756.t1 | MTR_6g007757 | 32.036 | 334 | 204 | 7 | 1 | 327 | 38 | 355 | 7.30e-30 | 117 |
| MS.gene62756.t1 | MTR_5g034970 | 28.956 | 297 | 193 | 4 | 1 | 296 | 33 | 312 | 3.26e-29 | 115 |
| MS.gene62756.t1 | MTR_1g052205 | 27.016 | 248 | 158 | 4 | 90 | 324 | 14 | 251 | 6.35e-28 | 109 |
| MS.gene62756.t1 | MTR_4g100840 | 25.545 | 321 | 219 | 6 | 1 | 310 | 40 | 351 | 1.15e-27 | 111 |
| MS.gene62756.t1 | MTR_4g094340 | 33.953 | 215 | 137 | 3 | 1 | 213 | 35 | 246 | 1.23e-26 | 106 |
| MS.gene62756.t1 | MTR_4g094340 | 33.953 | 215 | 137 | 3 | 1 | 213 | 53 | 264 | 1.87e-26 | 106 |
| MS.gene62756.t1 | MTR_3g095440 | 30.702 | 228 | 151 | 3 | 1 | 223 | 31 | 256 | 3.31e-26 | 105 |
| MS.gene62756.t1 | MTR_3g072530 | 31.102 | 254 | 124 | 6 | 1 | 212 | 40 | 284 | 8.87e-26 | 105 |
| MS.gene62756.t1 | MTR_3g072500 | 32.759 | 174 | 112 | 3 | 1 | 172 | 46 | 216 | 1.92e-23 | 97.1 |
| MS.gene62756.t1 | MTR_1g051120 | 31.792 | 173 | 113 | 3 | 1 | 172 | 42 | 210 | 1.38e-22 | 94.4 |
| MS.gene62756.t1 | MTR_1g051120 | 31.395 | 172 | 113 | 3 | 1 | 171 | 42 | 209 | 1.67e-21 | 92.8 |
| MS.gene62756.t1 | MTR_4g094342 | 32.044 | 181 | 119 | 2 | 1 | 178 | 39 | 218 | 1.71e-20 | 89.7 |
| MS.gene62756.t1 | MTR_4g094340 | 35.057 | 174 | 108 | 3 | 1 | 172 | 53 | 223 | 2.61e-20 | 88.6 |
| MS.gene62756.t1 | MTR_5g034980 | 29.439 | 214 | 146 | 3 | 1 | 213 | 33 | 242 | 6.52e-20 | 89.0 |
| MS.gene62756.t1 | MTR_6g007757 | 31.507 | 219 | 131 | 5 | 1 | 212 | 38 | 244 | 8.04e-18 | 82.4 |
| MS.gene62756.t1 | MTR_4g094348 | 34.400 | 125 | 71 | 2 | 56 | 171 | 2 | 124 | 2.35e-16 | 76.3 |
| MS.gene62756.t1 | MTR_1g014790 | 35.433 | 127 | 68 | 2 | 59 | 178 | 46 | 165 | 3.18e-14 | 70.9 |
| MS.gene62756.t1 | MTR_3g093450 | 27.692 | 195 | 88 | 6 | 109 | 293 | 25 | 176 | 1.49e-11 | 63.2 |
| MS.gene62756.t1 | MTR_1g068720 | 32.000 | 125 | 78 | 3 | 177 | 296 | 101 | 223 | 3.46e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62756.t1 | AT4G30420 | 51.312 | 343 | 156 | 4 | 1 | 341 | 24 | 357 | 1.37e-121 | 355 |
| MS.gene62756.t1 | AT4G30420 | 51.312 | 343 | 156 | 4 | 1 | 341 | 34 | 367 | 2.33e-121 | 355 |
| MS.gene62756.t1 | AT4G28040 | 43.732 | 343 | 174 | 5 | 1 | 341 | 33 | 358 | 5.46e-93 | 281 |
| MS.gene62756.t1 | AT4G28040 | 43.732 | 343 | 174 | 5 | 1 | 341 | 33 | 358 | 5.46e-93 | 281 |
| MS.gene62756.t1 | AT4G28040 | 43.732 | 343 | 174 | 5 | 1 | 341 | 33 | 358 | 5.46e-93 | 281 |
| MS.gene62756.t1 | AT4G28040 | 43.732 | 343 | 174 | 5 | 1 | 341 | 33 | 358 | 5.46e-93 | 281 |
| MS.gene62756.t1 | AT4G28040 | 43.732 | 343 | 174 | 5 | 1 | 341 | 33 | 358 | 5.46e-93 | 281 |
| MS.gene62756.t1 | AT1G75500 | 39.482 | 309 | 181 | 2 | 1 | 304 | 45 | 352 | 3.60e-72 | 229 |
| MS.gene62756.t1 | AT1G75500 | 39.482 | 309 | 181 | 2 | 1 | 304 | 45 | 352 | 3.60e-72 | 229 |
| MS.gene62756.t1 | AT3G18200 | 38.387 | 310 | 183 | 4 | 1 | 308 | 60 | 363 | 2.18e-71 | 227 |
| MS.gene62756.t1 | AT3G53210 | 40.136 | 294 | 174 | 2 | 1 | 294 | 35 | 326 | 1.27e-69 | 222 |
| MS.gene62756.t1 | AT4G08300 | 33.333 | 342 | 215 | 5 | 1 | 334 | 36 | 372 | 2.59e-62 | 203 |
| MS.gene62756.t1 | AT1G21890 | 36.964 | 303 | 183 | 2 | 1 | 296 | 36 | 337 | 8.06e-62 | 202 |
| MS.gene62756.t1 | AT3G53210 | 41.393 | 244 | 142 | 1 | 51 | 294 | 27 | 269 | 2.56e-61 | 199 |
| MS.gene62756.t1 | AT5G64700 | 36.228 | 334 | 190 | 7 | 1 | 324 | 33 | 353 | 3.67e-59 | 194 |
| MS.gene62756.t1 | AT2G37460 | 33.540 | 322 | 200 | 5 | 1 | 320 | 40 | 349 | 6.54e-58 | 192 |
| MS.gene62756.t1 | AT1G09380 | 34.915 | 295 | 189 | 2 | 1 | 293 | 33 | 326 | 9.07e-57 | 189 |
| MS.gene62756.t1 | AT2G39510 | 34.343 | 297 | 191 | 3 | 1 | 296 | 33 | 326 | 1.85e-56 | 188 |
| MS.gene62756.t1 | AT4G08290 | 34.925 | 335 | 207 | 4 | 1 | 328 | 38 | 368 | 3.01e-56 | 187 |
| MS.gene62756.t1 | AT3G18200 | 39.076 | 238 | 138 | 3 | 73 | 308 | 1 | 233 | 5.94e-56 | 183 |
| MS.gene62756.t1 | AT5G07050 | 33.432 | 338 | 193 | 8 | 1 | 319 | 43 | 367 | 2.83e-55 | 186 |
| MS.gene62756.t1 | AT2G40900 | 33.225 | 307 | 196 | 4 | 1 | 306 | 36 | 334 | 3.46e-55 | 185 |
| MS.gene62756.t1 | AT1G44800 | 32.407 | 324 | 209 | 4 | 1 | 319 | 36 | 354 | 1.63e-54 | 183 |
| MS.gene62756.t1 | AT5G13670 | 34.304 | 309 | 177 | 6 | 1 | 296 | 33 | 328 | 2.45e-54 | 182 |
| MS.gene62756.t1 | AT1G11450 | 33.784 | 296 | 185 | 4 | 10 | 301 | 6 | 294 | 1.60e-52 | 176 |
| MS.gene62756.t1 | AT1G11450 | 33.115 | 305 | 193 | 4 | 1 | 301 | 41 | 338 | 1.99e-52 | 177 |
| MS.gene62756.t1 | AT3G30340 | 33.007 | 306 | 199 | 3 | 1 | 304 | 36 | 337 | 6.39e-52 | 176 |
| MS.gene62756.t1 | AT1G43650 | 33.333 | 315 | 202 | 3 | 1 | 314 | 32 | 339 | 1.68e-51 | 174 |
| MS.gene62756.t1 | AT1G11450 | 33.447 | 293 | 184 | 4 | 13 | 301 | 2 | 287 | 6.04e-51 | 171 |
| MS.gene62756.t1 | AT4G01440 | 32.026 | 306 | 201 | 3 | 1 | 304 | 35 | 335 | 1.65e-50 | 172 |
| MS.gene62756.t1 | AT5G40240 | 32.710 | 321 | 211 | 4 | 1 | 318 | 45 | 363 | 3.10e-50 | 172 |
| MS.gene62756.t1 | AT5G40240 | 32.710 | 321 | 211 | 4 | 1 | 318 | 45 | 363 | 3.10e-50 | 172 |
| MS.gene62756.t1 | AT1G11460 | 34.426 | 305 | 182 | 6 | 1 | 297 | 41 | 335 | 3.93e-50 | 171 |
| MS.gene62756.t1 | AT5G40240 | 32.710 | 321 | 211 | 4 | 1 | 318 | 59 | 377 | 5.99e-50 | 171 |
| MS.gene62756.t1 | AT1G21890 | 35.231 | 281 | 174 | 2 | 1 | 274 | 36 | 315 | 6.46e-50 | 170 |
| MS.gene62756.t1 | AT5G40230 | 32.727 | 330 | 214 | 4 | 1 | 327 | 46 | 370 | 6.54e-50 | 171 |
| MS.gene62756.t1 | AT1G01070 | 34.228 | 298 | 191 | 4 | 1 | 296 | 41 | 335 | 8.19e-49 | 168 |
| MS.gene62756.t1 | AT3G28050 | 34.940 | 332 | 198 | 7 | 1 | 328 | 37 | 354 | 1.27e-48 | 167 |
| MS.gene62756.t1 | AT3G56620 | 32.765 | 293 | 190 | 3 | 1 | 293 | 36 | 321 | 1.58e-48 | 167 |
| MS.gene62756.t1 | AT4G01430 | 30.699 | 329 | 219 | 4 | 1 | 324 | 34 | 358 | 1.59e-48 | 167 |
| MS.gene62756.t1 | AT3G53210 | 38.117 | 223 | 136 | 2 | 1 | 223 | 35 | 255 | 1.38e-47 | 162 |
| MS.gene62756.t1 | AT1G11450 | 33.871 | 248 | 160 | 2 | 55 | 301 | 2 | 246 | 9.72e-46 | 157 |
| MS.gene62756.t1 | AT1G01070 | 35.294 | 255 | 163 | 2 | 44 | 297 | 36 | 289 | 2.16e-45 | 157 |
| MS.gene62756.t1 | AT5G47470 | 33.225 | 307 | 189 | 5 | 1 | 302 | 55 | 350 | 3.44e-45 | 158 |
| MS.gene62756.t1 | AT5G47470 | 33.225 | 307 | 189 | 5 | 1 | 302 | 83 | 378 | 3.84e-45 | 159 |
| MS.gene62756.t1 | AT5G47470 | 33.225 | 307 | 189 | 5 | 1 | 302 | 83 | 378 | 4.07e-45 | 159 |
| MS.gene62756.t1 | AT4G01440 | 30.824 | 279 | 186 | 3 | 1 | 277 | 35 | 308 | 3.69e-44 | 154 |
| MS.gene62756.t1 | AT4G15540 | 33.333 | 318 | 198 | 3 | 1 | 317 | 42 | 346 | 7.09e-43 | 152 |
| MS.gene62756.t1 | AT4G15540 | 33.333 | 318 | 198 | 3 | 1 | 317 | 42 | 346 | 7.09e-43 | 152 |
| MS.gene62756.t1 | AT1G11450 | 31.655 | 278 | 179 | 4 | 1 | 274 | 41 | 311 | 2.05e-41 | 147 |
| MS.gene62756.t1 | AT5G45370 | 30.645 | 310 | 198 | 5 | 1 | 296 | 45 | 351 | 3.38e-41 | 148 |
| MS.gene62756.t1 | AT5G45370 | 30.645 | 310 | 198 | 5 | 1 | 296 | 45 | 351 | 3.38e-41 | 148 |
| MS.gene62756.t1 | AT2G37450 | 32.215 | 298 | 173 | 5 | 1 | 296 | 34 | 304 | 3.17e-40 | 144 |
| MS.gene62756.t1 | AT5G45370 | 30.640 | 297 | 191 | 5 | 1 | 296 | 45 | 327 | 3.67e-39 | 142 |
| MS.gene62756.t1 | AT3G45870 | 30.667 | 300 | 197 | 3 | 1 | 291 | 37 | 334 | 4.86e-39 | 142 |
| MS.gene62756.t1 | AT4G01430 | 30.526 | 285 | 195 | 3 | 1 | 283 | 34 | 317 | 9.80e-39 | 140 |
| MS.gene62756.t1 | AT1G70260 | 29.073 | 313 | 211 | 5 | 1 | 306 | 37 | 345 | 3.10e-38 | 140 |
| MS.gene62756.t1 | AT4G01440 | 30.736 | 231 | 154 | 2 | 76 | 304 | 1 | 227 | 3.32e-36 | 132 |
| MS.gene62756.t1 | AT4G01440 | 30.736 | 231 | 154 | 2 | 76 | 304 | 1 | 227 | 3.32e-36 | 132 |
| MS.gene62756.t1 | AT4G19185 | 28.803 | 309 | 205 | 3 | 1 | 296 | 46 | 352 | 4.74e-36 | 135 |
| MS.gene62756.t1 | AT1G68170 | 30.100 | 299 | 205 | 3 | 1 | 297 | 38 | 334 | 1.58e-35 | 132 |
| MS.gene62756.t1 | AT1G68170 | 30.100 | 299 | 205 | 3 | 1 | 297 | 28 | 324 | 1.78e-35 | 132 |
| MS.gene62756.t1 | AT5G40210 | 30.263 | 304 | 187 | 5 | 1 | 301 | 38 | 319 | 2.07e-35 | 132 |
| MS.gene62756.t1 | AT5G64700 | 35.193 | 233 | 135 | 6 | 1 | 223 | 33 | 259 | 4.03e-35 | 129 |
| MS.gene62756.t1 | AT1G60050 | 27.515 | 338 | 235 | 5 | 1 | 329 | 38 | 374 | 1.31e-34 | 130 |
| MS.gene62756.t1 | AT4G01430 | 30.769 | 221 | 152 | 1 | 105 | 324 | 1 | 221 | 3.23e-33 | 123 |
| MS.gene62756.t1 | AT4G01450 | 31.208 | 298 | 198 | 2 | 1 | 298 | 35 | 325 | 4.12e-33 | 126 |
| MS.gene62756.t1 | AT2G37450 | 33.047 | 233 | 149 | 3 | 66 | 296 | 5 | 232 | 4.87e-33 | 124 |
| MS.gene62756.t1 | AT3G45870 | 29.474 | 285 | 190 | 3 | 1 | 276 | 37 | 319 | 1.48e-32 | 124 |
| MS.gene62756.t1 | AT3G28130 | 29.195 | 298 | 206 | 5 | 1 | 296 | 38 | 332 | 6.97e-32 | 122 |
| MS.gene62756.t1 | AT3G28070 | 29.779 | 272 | 176 | 7 | 61 | 329 | 9 | 268 | 9.86e-32 | 120 |
| MS.gene62756.t1 | AT4G19185 | 28.077 | 260 | 173 | 2 | 50 | 296 | 16 | 274 | 1.08e-31 | 121 |
| MS.gene62756.t1 | AT4G16620 | 28.242 | 347 | 218 | 7 | 1 | 341 | 37 | 358 | 1.14e-31 | 122 |
| MS.gene62756.t1 | AT4G01450 | 29.927 | 274 | 185 | 2 | 1 | 274 | 35 | 301 | 2.51e-31 | 121 |
| MS.gene62756.t1 | AT5G45370 | 28.800 | 250 | 162 | 4 | 61 | 296 | 2 | 249 | 2.63e-31 | 119 |
| MS.gene62756.t1 | AT5G45370 | 28.800 | 250 | 162 | 4 | 61 | 296 | 2 | 249 | 2.63e-31 | 119 |
| MS.gene62756.t1 | AT3G28130 | 29.167 | 240 | 166 | 4 | 59 | 296 | 9 | 246 | 3.93e-31 | 119 |
| MS.gene62756.t1 | AT3G28130 | 29.167 | 240 | 166 | 4 | 59 | 296 | 9 | 246 | 3.93e-31 | 119 |
| MS.gene62756.t1 | AT3G28070 | 29.412 | 272 | 177 | 7 | 61 | 329 | 101 | 360 | 5.20e-31 | 120 |
| MS.gene62756.t1 | AT1G25270 | 28.283 | 297 | 210 | 2 | 1 | 296 | 28 | 322 | 2.73e-30 | 118 |
| MS.gene62756.t1 | AT4G08290 | 35.349 | 215 | 132 | 2 | 1 | 212 | 38 | 248 | 6.59e-30 | 115 |
| MS.gene62756.t1 | AT3G28100 | 28.395 | 324 | 221 | 5 | 1 | 323 | 39 | 352 | 1.62e-29 | 116 |
| MS.gene62756.t1 | AT3G28080 | 28.148 | 270 | 184 | 4 | 61 | 329 | 9 | 269 | 1.25e-28 | 112 |
| MS.gene62756.t1 | AT3G28080 | 28.148 | 270 | 184 | 4 | 61 | 329 | 9 | 269 | 1.25e-28 | 112 |
| MS.gene62756.t1 | AT3G28080 | 28.148 | 270 | 184 | 4 | 61 | 329 | 9 | 269 | 1.25e-28 | 112 |
| MS.gene62756.t1 | AT3G28080 | 28.148 | 270 | 184 | 4 | 61 | 329 | 9 | 269 | 1.25e-28 | 112 |
| MS.gene62756.t1 | AT3G28080 | 28.148 | 270 | 184 | 4 | 61 | 329 | 90 | 350 | 6.44e-28 | 112 |
| MS.gene62756.t1 | AT3G28080 | 28.148 | 270 | 184 | 4 | 61 | 329 | 98 | 358 | 7.01e-28 | 112 |
| MS.gene62756.t1 | AT4G01440 | 29.646 | 226 | 152 | 3 | 1 | 224 | 35 | 255 | 8.66e-28 | 110 |
| MS.gene62756.t1 | AT1G43650 | 34.101 | 217 | 129 | 5 | 1 | 213 | 32 | 238 | 3.91e-27 | 108 |
| MS.gene62756.t1 | AT2G37450 | 32.075 | 212 | 137 | 3 | 87 | 296 | 59 | 265 | 7.52e-27 | 108 |
| MS.gene62756.t1 | AT5G45370 | 29.091 | 220 | 140 | 4 | 91 | 296 | 74 | 291 | 5.94e-26 | 106 |
| MS.gene62756.t1 | AT3G45870 | 29.524 | 210 | 138 | 2 | 91 | 291 | 51 | 259 | 1.40e-25 | 104 |
| MS.gene62756.t1 | AT3G30340 | 30.531 | 226 | 151 | 3 | 1 | 224 | 36 | 257 | 9.21e-25 | 102 |
| MS.gene62756.t1 | AT4G24980 | 28.378 | 296 | 137 | 7 | 1 | 293 | 12 | 235 | 1.28e-24 | 101 |
| MS.gene62756.t1 | AT3G45870 | 29.614 | 233 | 153 | 3 | 1 | 224 | 37 | 267 | 2.37e-24 | 100 |
| MS.gene62756.t1 | AT3G28070 | 27.984 | 243 | 160 | 7 | 90 | 329 | 1 | 231 | 5.00e-24 | 99.0 |
| MS.gene62756.t1 | AT3G28130 | 27.273 | 209 | 148 | 4 | 90 | 296 | 1 | 207 | 2.24e-23 | 97.1 |
| MS.gene62756.t1 | AT4G16620 | 27.305 | 282 | 174 | 7 | 66 | 341 | 5 | 261 | 4.61e-22 | 94.4 |
| MS.gene62756.t1 | AT4G16620 | 27.305 | 282 | 174 | 7 | 66 | 341 | 5 | 261 | 4.61e-22 | 94.4 |
| MS.gene62756.t1 | AT4G01450 | 29.048 | 210 | 142 | 2 | 1 | 210 | 35 | 237 | 7.25e-22 | 93.6 |
| MS.gene62756.t1 | AT3G28070 | 29.032 | 217 | 148 | 5 | 61 | 274 | 101 | 314 | 3.17e-21 | 92.8 |
| MS.gene62756.t1 | AT3G28080 | 26.556 | 241 | 167 | 4 | 90 | 329 | 1 | 232 | 1.18e-20 | 89.7 |
| MS.gene62756.t1 | AT4G16620 | 33.505 | 194 | 119 | 3 | 1 | 191 | 37 | 223 | 1.35e-19 | 87.4 |
| MS.gene62756.t1 | AT4G01450 | 30.168 | 179 | 118 | 2 | 1 | 179 | 35 | 206 | 1.53e-19 | 87.0 |
| MS.gene62756.t1 | AT3G45870 | 31.944 | 144 | 97 | 1 | 148 | 291 | 41 | 183 | 2.14e-19 | 86.3 |
| MS.gene62756.t1 | AT3G45870 | 27.979 | 193 | 129 | 2 | 91 | 274 | 51 | 242 | 2.49e-19 | 86.3 |
| MS.gene62756.t1 | AT3G45870 | 27.979 | 193 | 129 | 2 | 91 | 274 | 51 | 242 | 2.49e-19 | 86.3 |
| MS.gene62756.t1 | AT3G28080 | 25.651 | 269 | 138 | 4 | 61 | 329 | 9 | 215 | 3.61e-19 | 85.1 |
| MS.gene62756.t1 | AT3G28080 | 25.651 | 269 | 138 | 4 | 61 | 329 | 98 | 304 | 1.43e-18 | 85.1 |
| MS.gene62756.t1 | AT3G45870 | 27.397 | 146 | 96 | 2 | 88 | 224 | 1 | 145 | 6.46e-13 | 66.2 |
| MS.gene62756.t1 | AT3G28130 | 27.232 | 224 | 159 | 4 | 1 | 222 | 38 | 259 | 8.54e-13 | 68.2 |
| MS.gene62756.t1 | AT3G28130 | 31.214 | 173 | 116 | 3 | 1 | 172 | 38 | 208 | 1.33e-11 | 63.9 |
| MS.gene62756.t1 | AT3G28100 | 30.208 | 192 | 133 | 1 | 1 | 192 | 39 | 229 | 1.75e-11 | 63.9 |
| MS.gene62756.t1 | AT3G45870 | 27.273 | 143 | 94 | 2 | 91 | 224 | 51 | 192 | 4.35e-11 | 62.0 |
| MS.gene62756.t1 | AT3G28100 | 28.037 | 214 | 152 | 2 | 1 | 213 | 39 | 251 | 7.89e-11 | 62.4 |
Find 61 sgRNAs with CRISPR-Local
Find 87 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCATTGTCCCCACTATTT+TGG | 0.190725 | 8.4:+80690979 | None:intergenic |
| ATCAATTCTTTGCTTCAATT+TGG | 0.217860 | 8.4:-80690429 | MS.gene62756:CDS |
| TTATTCTTGACCTCACTAAT+TGG | 0.247020 | 8.4:-80691378 | MS.gene62756:CDS |
| AATTGATCTTCCACACATTC+AGG | 0.277827 | 8.4:+80690445 | None:intergenic |
| AGGCTTGTATACTGTACTTT+GGG | 0.280415 | 8.4:-80689995 | MS.gene62756:CDS |
| ACTGTGTTGCCTGGTCAATT+TGG | 0.328526 | 8.4:-80690805 | MS.gene62756:CDS |
| TCTACATTATTTAGTAGCTT+TGG | 0.345668 | 8.4:+80690917 | None:intergenic |
| ATGTAATTTGTTAGCTTGAT+TGG | 0.346431 | 8.4:-80690036 | MS.gene62756:intron |
| GTTCTTCCAAATGATGAGTT+TGG | 0.347202 | 8.4:+80689854 | None:intergenic |
| GCTGTAAATGACAAGTAATT+AGG | 0.355735 | 8.4:+80690528 | None:intergenic |
| TTATTGCCAAACTCATCATT+TGG | 0.389599 | 8.4:-80689860 | MS.gene62756:CDS |
| CTTGCCATGATTGACTTTGA+AGG | 0.404722 | 8.4:+80690884 | None:intergenic |
| TTTGTAATAGCAGCCTTTGT+AGG | 0.408588 | 8.4:-80691146 | MS.gene62756:CDS |
| TCATTAATAATCATCAACTT+TGG | 0.411929 | 8.4:+80689928 | None:intergenic |
| GGTGCAATTGGAGTGATCAT+AGG | 0.416497 | 8.4:-80690015 | MS.gene62756:CDS |
| AAGAACTATAGCCAAAATAG+TGG | 0.417858 | 8.4:-80690990 | MS.gene62756:CDS |
| TATTCTTGACCTCACTAATT+GGG | 0.424692 | 8.4:-80691377 | MS.gene62756:intron |
| TTACATTTCATAGGGAATCA+TGG | 0.432571 | 8.4:-80690300 | MS.gene62756:intron |
| GTTAGCTTGATTGGTGCAAT+TGG | 0.442208 | 8.4:-80690027 | MS.gene62756:intron |
| TAGGCTTGTATACTGTACTT+TGG | 0.445695 | 8.4:-80689996 | MS.gene62756:CDS |
| TCTTTGAAATGCACCAAGCT+TGG | 0.450004 | 8.4:+80690255 | None:intergenic |
| CTAGTAGTGATAATGCGAAT+TGG | 0.462237 | 8.4:-80690856 | MS.gene62756:CDS |
| AGTATCTATTGCATTGTTGA+AGG | 0.465625 | 8.4:-80690942 | MS.gene62756:CDS |
| TTAGGATGGCTTGCATAAGC+TGG | 0.480462 | 8.4:+80690546 | None:intergenic |
| TACATTTCATAGGGAATCAT+GGG | 0.488615 | 8.4:-80690299 | MS.gene62756:intron |
| ATTATTAATGAGACAGAGGA+AGG | 0.498746 | 8.4:-80689916 | MS.gene62756:CDS |
| GCTATTACAAATGTAACTGC+TGG | 0.501198 | 8.4:+80691158 | None:intergenic |
| TTTCTTGACAGGAGAAACTC+TGG | 0.503537 | 8.4:-80691435 | MS.gene62756:intron |
| TGCTATCTTGTTGCTTCATG+AGG | 0.504097 | 8.4:-80690174 | MS.gene62756:CDS |
| GTCACAATTAATGTGAAAAG+AGG | 0.504645 | 8.4:+80690203 | None:intergenic |
| TTGTAATAGCAGCCTTTGTA+GGG | 0.505236 | 8.4:-80691145 | MS.gene62756:intron |
| GTGGACTAAGCATGTAATAG+AGG | 0.527589 | 8.4:+80689832 | None:intergenic |
| TATACCTTCAAAGTCAATCA+TGG | 0.529801 | 8.4:-80690888 | MS.gene62756:CDS |
| AGAACTATAGCCAAAATAGT+GGG | 0.530722 | 8.4:-80690989 | MS.gene62756:CDS |
| GATAATGCGAATTGGTTGCT+TGG | 0.531604 | 8.4:-80690848 | MS.gene62756:CDS |
| CTTCATGAGGAAATATACAT+TGG | 0.532240 | 8.4:-80690161 | MS.gene62756:CDS |
| CGGTACACAACAAATACCCT+AGG | 0.540219 | 8.4:+80691578 | None:intergenic |
| ATTACTTGTCATTTACAGCA+TGG | 0.541204 | 8.4:-80690524 | MS.gene62756:CDS |
| TGTAACTGCTGGAACAAGGT+TGG | 0.541791 | 8.4:+80691169 | None:intergenic |
| TTTGCAGGGTTTGAGCCCTA+GGG | 0.543458 | 8.4:-80691594 | None:intergenic |
| GATGATTATTAATGAGACAG+AGG | 0.548661 | 8.4:-80689920 | MS.gene62756:CDS |
| GGGACAATGATATGTATAAG+TGG | 0.560003 | 8.4:-80690968 | MS.gene62756:CDS |
| AGCAACAGGAGCAAGAAGAA+TGG | 0.560164 | 8.4:+80691541 | None:intergenic |
| GTATCTATTGCATTGTTGAA+GGG | 0.561664 | 8.4:-80690941 | MS.gene62756:CDS |
| ATGAGGAAATATACATTGGA+AGG | 0.568135 | 8.4:-80690157 | MS.gene62756:intron |
| CAAAATGAGCCAAATTGACC+AGG | 0.569290 | 8.4:+80690796 | None:intergenic |
| TAACATTCTATCTCCAAGCT+TGG | 0.571991 | 8.4:-80690268 | MS.gene62756:CDS |
| CAAATGTAACTGCTGGAACA+AGG | 0.576764 | 8.4:+80691165 | None:intergenic |
| TGCTGGAACAAGGTTGGACA+TGG | 0.579813 | 8.4:+80691175 | None:intergenic |
| TCACAATTAATGTGAAAAGA+GGG | 0.589292 | 8.4:+80690204 | None:intergenic |
| GGCTTGTATACTGTACTTTG+GGG | 0.593434 | 8.4:-80689994 | MS.gene62756:CDS |
| AGTAATTACGTACCCTACAA+AGG | 0.606201 | 8.4:+80691133 | None:intergenic |
| GCTTGGTGCATTTCAAAGAG+AGG | 0.611097 | 8.4:-80690251 | MS.gene62756:CDS |
| TAAATGACAAGTAATTAGGA+TGG | 0.617968 | 8.4:+80690532 | None:intergenic |
| TTATTAATGAGACAGAGGAA+GGG | 0.651566 | 8.4:-80689915 | MS.gene62756:CDS |
| GGAAACTAACCCAATTAGTG+AGG | 0.656012 | 8.4:+80691368 | None:intergenic |
| GAATGGTTGCAATAGCATGA+CGG | 0.671471 | 8.4:+80691558 | None:intergenic |
| TTAAACATAGCAGAGAAGAG+AGG | 0.674281 | 8.4:+80690227 | None:intergenic |
| TTGAATCAGACCTGAATGTG+TGG | 0.674327 | 8.4:-80690455 | MS.gene62756:CDS |
| GAACTATAGCCAAAATAGTG+GGG | 0.681705 | 8.4:-80690988 | MS.gene62756:CDS |
| GGTACACAACAAATACCCTA+GGG | 0.684227 | 8.4:+80691579 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATCAAAATTTATTTTTTGA+GGG | - | chr8.4:80690194-80690213 | MS.gene62756:CDS | 10.0% |
| !! | AAATGTAATTACTACTAATT+AGG | + | chr8.4:80691112-80691131 | None:intergenic | 15.0% |
| !! | AGAAAAACTCTTTAAATTTA+AGG | + | chr8.4:80690023-80690042 | None:intergenic | 15.0% |
| !! | ATATTATTATTACTAGAGAA+TGG | + | chr8.4:80690080-80690099 | None:intergenic | 15.0% |
| !!! | GAATCAAAATTTATTTTTTG+AGG | - | chr8.4:80690193-80690212 | MS.gene62756:CDS | 15.0% |
| !! | AATACTATTATACTACAGAA+TGG | - | chr8.4:80690389-80690408 | MS.gene62756:intron | 20.0% |
| !! | AGTAGTAATTACATTTCATA+GGG | - | chr8.4:80691116-80691135 | MS.gene62756:intron | 20.0% |
| !! | ATAAATTAATACATCATCAG+TGG | - | chr8.4:80691086-80691105 | MS.gene62756:intron | 20.0% |
| !! | TAGTAGTAATTACATTTCAT+AGG | - | chr8.4:80691115-80691134 | MS.gene62756:intron | 20.0% |
| !! | TCATTAATAATCATCAACTT+TGG | + | chr8.4:80691499-80691518 | None:intergenic | 20.0% |
| !!! | CGAATGTGTTTTTTAATTAT+TGG | - | chr8.4:80690355-80690374 | MS.gene62756:intron | 20.0% |
| ! | ATCAATTCTTTGCTTCAATT+TGG | - | chr8.4:80690995-80691014 | MS.gene62756:CDS | 25.0% |
| ! | CATATTTACACTACTCATTA+CGG | - | chr8.4:80690105-80690124 | MS.gene62756:intron | 25.0% |
| ! | CTTATCTCAAATTGAATTAC+AGG | - | chr8.4:80691332-80691351 | MS.gene62756:intron | 25.0% |
| ! | TAAATGACAAGTAATTAGGA+TGG | + | chr8.4:80690895-80690914 | None:intergenic | 25.0% |
| ! | TATATGTGTCATAATGTACT+AGG | - | chr8.4:80690692-80690711 | MS.gene62756:intron | 25.0% |
| ! | TATCATATTATACTTTCCTC+AGG | - | chr8.4:80690853-80690872 | MS.gene62756:CDS | 25.0% |
| ! | TCACAATTAATGTGAAAAGA+GGG | + | chr8.4:80691223-80691242 | None:intergenic | 25.0% |
| ! | TCTACATTATTTAGTAGCTT+TGG | + | chr8.4:80690510-80690529 | None:intergenic | 25.0% |
| !!! | ATGTAATTTGTTAGCTTGAT+TGG | - | chr8.4:80691388-80691407 | MS.gene62756:CDS | 25.0% |
| !!! | TATTTCTTTTGTTTCTTGAC+AGG | - | chr8.4:80689978-80689997 | MS.gene62756:CDS | 25.0% |
| AAGAACTATAGCCAAAATAG+TGG | - | chr8.4:80690434-80690453 | MS.gene62756:CDS | 30.0% | |
| AGAACTATAGCCAAAATAGT+GGG | - | chr8.4:80690435-80690454 | MS.gene62756:CDS | 30.0% | |
| AGTATCTATTGCATTGTTGA+AGG | - | chr8.4:80690482-80690501 | MS.gene62756:CDS | 30.0% | |
| ATAAAGCAATGAAAGAGAAG+TGG | + | chr8.4:80689938-80689957 | None:intergenic | 30.0% | |
| ATGAGGAAATATACATTGGA+AGG | - | chr8.4:80691267-80691286 | MS.gene62756:intron | 30.0% | |
| ATTATTAATGAGACAGAGGA+AGG | - | chr8.4:80691508-80691527 | MS.gene62756:intron | 30.0% | |
| CTTCATGAGGAAATATACAT+TGG | - | chr8.4:80691263-80691282 | MS.gene62756:intron | 30.0% | |
| GATGATTATTAATGAGACAG+AGG | - | chr8.4:80691504-80691523 | MS.gene62756:intron | 30.0% | |
| GATTTGTGTTTATCATGTCA+TGG | - | chr8.4:80690144-80690163 | MS.gene62756:intron | 30.0% | |
| GCTGTAAATGACAAGTAATT+AGG | + | chr8.4:80690899-80690918 | None:intergenic | 30.0% | |
| GTATCTATTGCATTGTTGAA+GGG | - | chr8.4:80690483-80690502 | MS.gene62756:CDS | 30.0% | |
| GTCACAATTAATGTGAAAAG+AGG | + | chr8.4:80691224-80691243 | None:intergenic | 30.0% | |
| TACATTTCATAGGGAATCAT+GGG | - | chr8.4:80691125-80691144 | MS.gene62756:intron | 30.0% | |
| TATACCTTCAAAGTCAATCA+TGG | - | chr8.4:80690536-80690555 | MS.gene62756:CDS | 30.0% | |
| TATTCTTGACCTCACTAATT+GGG | - | chr8.4:80690047-80690066 | MS.gene62756:intron | 30.0% | |
| TTACATTTCATAGGGAATCA+TGG | - | chr8.4:80691124-80691143 | MS.gene62756:intron | 30.0% | |
| TTATTAATGAGACAGAGGAA+GGG | - | chr8.4:80691509-80691528 | MS.gene62756:intron | 30.0% | |
| TTATTCTTGACCTCACTAAT+TGG | - | chr8.4:80690046-80690065 | MS.gene62756:intron | 30.0% | |
| TTATTGCCAAACTCATCATT+TGG | - | chr8.4:80691564-80691583 | MS.gene62756:CDS | 30.0% | |
| ! | ATTACTTGTCATTTACAGCA+TGG | - | chr8.4:80690900-80690919 | MS.gene62756:CDS | 30.0% |
| ! | TGCATTTTATATGCAGTATG+TGG | - | chr8.4:80691019-80691038 | MS.gene62756:CDS | 30.0% |
| ! | TGTCATAATGTACTAGGTTT+TGG | - | chr8.4:80690698-80690717 | MS.gene62756:intron | 30.0% |
| AATTGATCTTCCACACATTC+AGG | + | chr8.4:80690982-80691001 | None:intergenic | 35.0% | |
| AGAACCTCTATTACATGCTT+AGG | - | chr8.4:80691588-80691607 | MS.gene62756:CDS | 35.0% | |
| AGGCTTGTATACTGTACTTT+GGG | - | chr8.4:80691429-80691448 | MS.gene62756:intron | 35.0% | |
| AGTAATTACGTACCCTACAA+AGG | + | chr8.4:80690294-80690313 | None:intergenic | 35.0% | |
| GAACCTCTATTACATGCTTA+GGG | - | chr8.4:80691589-80691608 | MS.gene62756:CDS | 35.0% | |
| GAACTATAGCCAAAATAGTG+GGG | - | chr8.4:80690436-80690455 | MS.gene62756:CDS | 35.0% | |
| GCTATTACAAATGTAACTGC+TGG | + | chr8.4:80690269-80690288 | None:intergenic | 35.0% | |
| GGGACAATGATATGTATAAG+TGG | - | chr8.4:80690456-80690475 | MS.gene62756:CDS | 35.0% | |
| GTTCTTCCAAATGATGAGTT+TGG | + | chr8.4:80691573-80691592 | None:intergenic | 35.0% | |
| TAACATTCTATCTCCAAGCT+TGG | - | chr8.4:80691156-80691175 | MS.gene62756:CDS | 35.0% | |
| TACCCTGAAAAATAAGCAAC+AGG | + | chr8.4:80689900-80689919 | None:intergenic | 35.0% | |
| TAGGCTTGTATACTGTACTT+TGG | - | chr8.4:80691428-80691447 | MS.gene62756:intron | 35.0% | |
| TTAAACATAGCAGAGAAGAG+AGG | + | chr8.4:80691200-80691219 | None:intergenic | 35.0% | |
| TTGTAATAGCAGCCTTTGTA+GGG | - | chr8.4:80690279-80690298 | MS.gene62756:CDS | 35.0% | |
| TTTGTAATAGCAGCCTTTGT+AGG | - | chr8.4:80690278-80690297 | MS.gene62756:CDS | 35.0% | |
| ! | CTAGTAGTGATAATGCGAAT+TGG | - | chr8.4:80690568-80690587 | MS.gene62756:intron | 35.0% |
| ! | CTTGGATGTCTTTGTCTTTT+AGG | - | chr8.4:80690594-80690613 | MS.gene62756:intron | 35.0% |
| ! | TATCATTGTCCCCACTATTT+TGG | + | chr8.4:80690448-80690467 | None:intergenic | 35.0% |
| !! | CTCCTGTTGCTTATTTTTCA+GGG | - | chr8.4:80689895-80689914 | MS.gene62756:CDS | 35.0% |
| CAAAATGAGCCAAATTGACC+AGG | + | chr8.4:80690631-80690650 | None:intergenic | 40.0% | |
| CAAATGTAACTGCTGGAACA+AGG | + | chr8.4:80690262-80690281 | None:intergenic | 40.0% | |
| GAATGGTTGCAATAGCATGA+CGG | + | chr8.4:80689869-80689888 | None:intergenic | 40.0% | |
| GATAATGCGAATTGGTTGCT+TGG | - | chr8.4:80690576-80690595 | MS.gene62756:intron | 40.0% | |
| GGAAACTAACCCAATTAGTG+AGG | + | chr8.4:80690059-80690078 | None:intergenic | 40.0% | |
| GGCTTGTATACTGTACTTTG+GGG | - | chr8.4:80691430-80691449 | MS.gene62756:intron | 40.0% | |
| GGTACACAACAAATACCCTA+GGG | + | chr8.4:80689848-80689867 | None:intergenic | 40.0% | |
| TTGAATCAGACCTGAATGTG+TGG | - | chr8.4:80690969-80690988 | MS.gene62756:CDS | 40.0% | |
| TTTCTTGACAGGAGAAACTC+TGG | - | chr8.4:80689989-80690008 | MS.gene62756:CDS | 40.0% | |
| ! | CTTGCCATGATTGACTTTGA+AGG | + | chr8.4:80690543-80690562 | None:intergenic | 40.0% |
| ! | GTTAGCTTGATTGGTGCAAT+TGG | - | chr8.4:80691397-80691416 | MS.gene62756:CDS | 40.0% |
| ! | TGCTATCTTGTTGCTTCATG+AGG | - | chr8.4:80691250-80691269 | MS.gene62756:intron | 40.0% |
| !! | GCTCCTGTTGCTTATTTTTC+AGG | - | chr8.4:80689894-80689913 | MS.gene62756:CDS | 40.0% |
| !! | GTCAATTTGGCTCATTTTGC+AGG | - | chr8.4:80690632-80690651 | MS.gene62756:intron | 40.0% |
| !! | TCTTTGAAATGCACCAAGCT+TGG | + | chr8.4:80691172-80691191 | None:intergenic | 40.0% |
| !! | TTTTAGGAAACTGTGTTGCC+TGG | - | chr8.4:80690610-80690629 | MS.gene62756:intron | 40.0% |
| ACTGTGTTGCCTGGTCAATT+TGG | - | chr8.4:80690619-80690638 | MS.gene62756:intron | 45.0% | |
| AGCAACAGGAGCAAGAAGAA+TGG | + | chr8.4:80689886-80689905 | None:intergenic | 45.0% | |
| CGGTACACAACAAATACCCT+AGG | + | chr8.4:80689849-80689868 | None:intergenic | 45.0% | |
| GGTGCAATTGGAGTGATCAT+AGG | - | chr8.4:80691409-80691428 | MS.gene62756:CDS | 45.0% | |
| TGTAACTGCTGGAACAAGGT+TGG | + | chr8.4:80690258-80690277 | None:intergenic | 45.0% | |
| ! | TTAGGATGGCTTGCATAAGC+TGG | + | chr8.4:80690881-80690900 | None:intergenic | 45.0% |
| !! | GCTTGGTGCATTTCAAAGAG+AGG | - | chr8.4:80691173-80691192 | MS.gene62756:CDS | 45.0% |
| CTTGCATAAGCTGGAACCTG+AGG | + | chr8.4:80690872-80690891 | None:intergenic | 50.0% | |
| TGCTGGAACAAGGTTGGACA+TGG | + | chr8.4:80690252-80690271 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 80689837 | 80691609 | 80689837 | ID=MS.gene62756 |
| chr8.4 | mRNA | 80689837 | 80691609 | 80689837 | ID=MS.gene62756.t1;Parent=MS.gene62756 |
| chr8.4 | exon | 80691530 | 80691609 | 80691530 | ID=MS.gene62756.t1.exon1;Parent=MS.gene62756.t1 |
| chr8.4 | CDS | 80691530 | 80691609 | 80691530 | ID=cds.MS.gene62756.t1;Parent=MS.gene62756.t1 |
| chr8.4 | exon | 80691378 | 80691446 | 80691378 | ID=MS.gene62756.t1.exon2;Parent=MS.gene62756.t1 |
| chr8.4 | CDS | 80691378 | 80691446 | 80691378 | ID=cds.MS.gene62756.t1;Parent=MS.gene62756.t1 |
| chr8.4 | exon | 80691146 | 80691262 | 80691146 | ID=MS.gene62756.t1.exon3;Parent=MS.gene62756.t1 |
| chr8.4 | CDS | 80691146 | 80691262 | 80691146 | ID=cds.MS.gene62756.t1;Parent=MS.gene62756.t1 |
| chr8.4 | exon | 80690793 | 80691039 | 80690793 | ID=MS.gene62756.t1.exon4;Parent=MS.gene62756.t1 |
| chr8.4 | CDS | 80690793 | 80691039 | 80690793 | ID=cds.MS.gene62756.t1;Parent=MS.gene62756.t1 |
| chr8.4 | exon | 80690413 | 80690571 | 80690413 | ID=MS.gene62756.t1.exon5;Parent=MS.gene62756.t1 |
| chr8.4 | CDS | 80690413 | 80690571 | 80690413 | ID=cds.MS.gene62756.t1;Parent=MS.gene62756.t1 |
| chr8.4 | exon | 80690158 | 80690309 | 80690158 | ID=MS.gene62756.t1.exon6;Parent=MS.gene62756.t1 |
| chr8.4 | CDS | 80690158 | 80690309 | 80690158 | ID=cds.MS.gene62756.t1;Parent=MS.gene62756.t1 |
| chr8.4 | exon | 80689837 | 80690044 | 80689837 | ID=MS.gene62756.t1.exon7;Parent=MS.gene62756.t1 |
| chr8.4 | CDS | 80689837 | 80690044 | 80689837 | ID=cds.MS.gene62756.t1;Parent=MS.gene62756.t1 |
| Gene Sequence |
| Protein sequence |
