Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013113.t1 | XP_003602860.2 | 92.7 | 372 | 25 | 2 | 1 | 371 | 1 | 371 | 1.80E-184 | 655.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013113.t1 | Q9FZ95 | 57.9 | 354 | 135 | 2 | 13 | 366 | 1 | 340 | 2.8e-109 | 396.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013113.t1 | G7J4H5 | 92.7 | 372 | 25 | 2 | 1 | 371 | 1 | 371 | 1.3e-184 | 655.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene013113 | MS.gene043890 | PPI |
| MS.gene013113 | MS.gene010157 | PPI |
| MS.gene013113 | MS.gene64133 | PPI |
| MS.gene013113 | MS.gene38573 | PPI |
| MS.gene013113 | MS.gene020463 | PPI |
| MS.gene013113 | MS.gene38616 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013113.t1 | MTR_3g099740 | 92.742 | 372 | 25 | 2 | 1 | 371 | 1 | 371 | 0.0 | 692 |
| MS.gene013113.t1 | MTR_3g099750 | 87.871 | 371 | 44 | 1 | 1 | 371 | 1 | 370 | 0.0 | 665 |
| MS.gene013113.t1 | MTR_5g065080 | 63.315 | 368 | 120 | 5 | 2 | 368 | 10 | 363 | 2.97e-157 | 446 |
| MS.gene013113.t1 | MTR_2g437590 | 37.644 | 348 | 195 | 5 | 14 | 358 | 67 | 395 | 8.67e-72 | 230 |
| MS.gene013113.t1 | MTR_3g058660 | 32.749 | 342 | 220 | 2 | 3 | 344 | 2 | 333 | 1.34e-62 | 204 |
| MS.gene013113.t1 | MTR_2g015470 | 31.429 | 350 | 228 | 3 | 16 | 365 | 42 | 379 | 3.44e-60 | 199 |
| MS.gene013113.t1 | MTR_2g437580 | 33.702 | 362 | 209 | 5 | 1 | 354 | 34 | 372 | 2.91e-55 | 186 |
| MS.gene013113.t1 | MTR_8g024620 | 32.622 | 328 | 202 | 2 | 17 | 344 | 43 | 351 | 6.04e-52 | 177 |
| MS.gene013113.t1 | MTR_8g024620 | 32.622 | 328 | 202 | 2 | 17 | 344 | 54 | 362 | 9.99e-52 | 176 |
| MS.gene013113.t1 | MTR_8g024620 | 32.622 | 328 | 202 | 2 | 17 | 344 | 55 | 363 | 1.02e-51 | 176 |
| MS.gene013113.t1 | MTR_7g080750 | 32.000 | 350 | 200 | 6 | 11 | 351 | 20 | 340 | 1.32e-50 | 173 |
| MS.gene013113.t1 | MTR_4g098900 | 30.836 | 347 | 205 | 8 | 25 | 367 | 44 | 359 | 1.91e-50 | 174 |
| MS.gene013113.t1 | MTR_6g082540 | 33.333 | 153 | 102 | 0 | 197 | 349 | 4 | 156 | 5.02e-25 | 100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013113.t1 | AT1G28220 | 59.475 | 343 | 126 | 3 | 13 | 355 | 1 | 330 | 1.84e-145 | 416 |
| MS.gene013113.t1 | AT2G33750 | 55.398 | 352 | 143 | 2 | 12 | 363 | 2 | 339 | 6.77e-134 | 386 |
| MS.gene013113.t1 | AT1G28230 | 58.601 | 343 | 136 | 2 | 13 | 354 | 1 | 338 | 2.04e-132 | 383 |
| MS.gene013113.t1 | AT2G33750 | 53.719 | 363 | 143 | 3 | 12 | 363 | 2 | 350 | 2.46e-130 | 378 |
| MS.gene013113.t1 | AT4G18205 | 36.585 | 328 | 184 | 5 | 37 | 360 | 61 | 368 | 2.03e-57 | 191 |
| MS.gene013113.t1 | AT4G18220 | 33.537 | 328 | 203 | 2 | 28 | 355 | 57 | 369 | 2.61e-57 | 191 |
| MS.gene013113.t1 | AT4G18210 | 30.532 | 357 | 231 | 4 | 1 | 355 | 28 | 369 | 9.17e-53 | 180 |
| MS.gene013113.t1 | AT1G30840 | 32.320 | 362 | 212 | 5 | 17 | 363 | 27 | 370 | 4.52e-52 | 177 |
| MS.gene013113.t1 | AT1G30840 | 32.320 | 362 | 212 | 5 | 17 | 363 | 27 | 370 | 4.52e-52 | 177 |
| MS.gene013113.t1 | AT4G18197 | 35.826 | 321 | 182 | 5 | 37 | 353 | 64 | 364 | 6.06e-51 | 175 |
| MS.gene013113.t1 | AT4G18195 | 31.921 | 354 | 224 | 5 | 3 | 355 | 32 | 369 | 1.60e-49 | 171 |
| MS.gene013113.t1 | AT1G44750 | 30.141 | 355 | 227 | 3 | 11 | 360 | 26 | 364 | 3.48e-45 | 159 |
| MS.gene013113.t1 | AT1G44750 | 30.141 | 355 | 227 | 3 | 11 | 360 | 26 | 364 | 3.48e-45 | 159 |
| MS.gene013113.t1 | AT1G44750 | 30.141 | 355 | 227 | 3 | 11 | 360 | 38 | 376 | 4.70e-45 | 159 |
| MS.gene013113.t1 | AT1G44750 | 33.074 | 257 | 168 | 1 | 108 | 360 | 44 | 300 | 6.56e-44 | 154 |
| MS.gene013113.t1 | AT1G44750 | 33.074 | 257 | 168 | 1 | 108 | 360 | 44 | 300 | 6.56e-44 | 154 |
| MS.gene013113.t1 | AT1G44750 | 33.074 | 257 | 168 | 1 | 108 | 360 | 44 | 300 | 6.56e-44 | 154 |
| MS.gene013113.t1 | AT1G44750 | 33.074 | 257 | 168 | 1 | 108 | 360 | 44 | 300 | 6.56e-44 | 154 |
| MS.gene013113.t1 | AT1G44750 | 33.074 | 257 | 168 | 1 | 108 | 360 | 44 | 300 | 6.56e-44 | 154 |
| MS.gene013113.t1 | AT4G18190 | 31.215 | 362 | 229 | 4 | 3 | 357 | 20 | 368 | 9.01e-43 | 153 |
| MS.gene013113.t1 | AT2G24220 | 34.967 | 306 | 178 | 3 | 34 | 338 | 56 | 341 | 1.34e-40 | 147 |
| MS.gene013113.t1 | AT2G24220 | 34.967 | 306 | 178 | 3 | 34 | 338 | 74 | 359 | 1.65e-40 | 147 |
| MS.gene013113.t1 | AT4G08700 | 27.350 | 351 | 228 | 4 | 12 | 354 | 28 | 359 | 1.28e-38 | 142 |
| MS.gene013113.t1 | AT5G41160 | 27.356 | 329 | 211 | 3 | 34 | 354 | 54 | 362 | 1.36e-34 | 131 |
| MS.gene013113.t1 | AT1G19770 | 27.389 | 314 | 206 | 5 | 47 | 349 | 88 | 390 | 9.22e-26 | 107 |
| MS.gene013113.t1 | AT1G57943 | 24.796 | 367 | 234 | 9 | 11 | 353 | 37 | 385 | 4.18e-19 | 88.6 |
| MS.gene013113.t1 | AT1G57943 | 24.796 | 367 | 234 | 9 | 11 | 353 | 36 | 384 | 4.23e-19 | 88.2 |
| MS.gene013113.t1 | AT1G57980 | 26.882 | 372 | 222 | 11 | 7 | 353 | 35 | 381 | 3.68e-17 | 82.8 |
| MS.gene013113.t1 | AT1G57990 | 25.199 | 377 | 237 | 13 | 10 | 364 | 31 | 384 | 4.98e-17 | 82.0 |
| MS.gene013113.t1 | AT1G47603 | 26.271 | 354 | 224 | 9 | 17 | 352 | 49 | 383 | 6.91e-17 | 81.6 |
Find 0 sgRNAs with CRISPR-Local
Find 131 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTCATCTATTTTGTTT+GGG | - | 23849:11762-11781 | MS.gene013113:CDS | 15.0% |
| !! | AACAAAAATCATTTAGTGTT+TGG | + | 23849:12018-12037 | None:intergenic | 20.0% |
| !! | AATTAAAAAAATCACAAGTG+TGG | + | 23849:11854-11873 | None:intergenic | 20.0% |
| !! | AGGTAAGATTACATTAATTA+AGG | - | 23849:11650-11669 | MS.gene013113:intron | 20.0% |
| !! | TTATGAAATTCTATGTTGTA+TGG | - | 23849:11788-11807 | MS.gene013113:CDS | 20.0% |
| !!! | AATAATTGTGATTGAGATTT+TGG | - | 23849:12068-12087 | MS.gene013113:CDS | 20.0% |
| !!! | ATTAATTAAGGTTGTGTTTT+TGG | - | 23849:11662-11681 | MS.gene013113:intron | 20.0% |
| !!! | ATTATATTTAGTTTTTCTGC+AGG | + | 23849:11160-11179 | None:intergenic | 20.0% |
| !!! | CTATTTTCATCTATTTTGTT+TGG | - | 23849:11761-11780 | MS.gene013113:CDS | 20.0% |
| !!! | TTATATTTAGTTTTTCTGCA+GGG | + | 23849:11159-11178 | None:intergenic | 20.0% |
| ! | AAAAATTCCAAGCAGAAAAA+GGG | - | 23849:12304-12323 | MS.gene013113:CDS | 25.0% |
| ! | ATAACAAGAGAATAAGTGAT+GGG | + | 23849:11556-11575 | None:intergenic | 25.0% |
| !! | AGAGATTGGATTTTATTAAG+TGG | - | 23849:11938-11957 | MS.gene013113:CDS | 25.0% |
| !! | GATTGCAAACAATGATTTTA+AGG | - | 23849:11630-11649 | MS.gene013113:intron | 25.0% |
| !!! | GATTTTGGATTTGAAATTGT+AGG | - | 23849:12083-12102 | MS.gene013113:CDS | 25.0% |
| !!! | TATATTTAGTTTTTCTGCAG+GGG | + | 23849:11158-11177 | None:intergenic | 25.0% |
| AAAATTCCAAGCAGAAAAAG+GGG | - | 23849:12305-12324 | MS.gene013113:CDS | 30.0% | |
| AAGCTGAGATGCTATAATTA+AGG | + | 23849:11293-11312 | None:intergenic | 30.0% | |
| CATAACAAGAGAATAAGTGA+TGG | + | 23849:11557-11576 | None:intergenic | 30.0% | |
| CATCACTTATTCTCTTGTTA+TGG | - | 23849:11555-11574 | MS.gene013113:intron | 30.0% | |
| GAAAAATTCCAAGCAGAAAA+AGG | - | 23849:12303-12322 | MS.gene013113:CDS | 30.0% | |
| TCTGCAAAACAATATGCAAT+TGG | - | 23849:11448-11467 | MS.gene013113:intron | 30.0% | |
| TGCTATAATTAAGGAAGAAG+TGG | + | 23849:11284-11303 | None:intergenic | 30.0% | |
| TTAATTATAGCATCTCAGCT+TGG | - | 23849:11292-11311 | MS.gene013113:intron | 30.0% | |
| TTTGATCTCTCCATAGAAAT+AGG | + | 23849:12364-12383 | None:intergenic | 30.0% | |
| !!! | TGCAATTGGTTTTTTAACCA+CGG | - | 23849:11462-11481 | MS.gene013113:intron | 30.0% |
| AAATAGAGACGCATTATGAG+GGG | + | 23849:10992-11011 | None:intergenic | 35.0% | |
| AATTGTCTCATATTAGCCCT+AGG | - | 23849:10953-10972 | MS.gene013113:CDS | 35.0% | |
| ACGTGGTTTAGAAATAGAGA+TGG | - | 23849:12407-12426 | MS.gene013113:CDS | 35.0% | |
| ATTAAGGAAGAAGTGGAAAC+TGG | + | 23849:11277-11296 | None:intergenic | 35.0% | |
| CGTGGTTTAGAAATAGAGAT+GGG | - | 23849:12408-12427 | MS.gene013113:CDS | 35.0% | |
| GAAATAGAGACGCATTATGA+GGG | + | 23849:10993-11012 | None:intergenic | 35.0% | |
| GAAATTGTAGGTGATTCCAA+GGG | - | 23849:12095-12114 | MS.gene013113:CDS | 35.0% | |
| GAAGAAAATAGGTGGTTTCA+TGG | + | 23849:11185-11204 | None:intergenic | 35.0% | |
| GGTTTCGTACAATTAGAGAT+TGG | - | 23849:11924-11943 | MS.gene013113:CDS | 35.0% | |
| GTCACTTGTACTTTCTCTTT+GGG | - | 23849:12329-12348 | MS.gene013113:CDS | 35.0% | |
| TAGAGTAGTTGAACCTATGA+AGG | - | 23849:11965-11984 | MS.gene013113:CDS | 35.0% | |
| TCACTTGTACTTTCTCTTTG+GGG | - | 23849:12330-12349 | MS.gene013113:CDS | 35.0% | |
| TCCAACAGTAAGCAAAACAA+TGG | + | 23849:11380-11399 | None:intergenic | 35.0% | |
| TGAAATAGAGACGCATTATG+AGG | + | 23849:10994-11013 | None:intergenic | 35.0% | |
| TGAAATTGTAGGTGATTCCA+AGG | - | 23849:12094-12113 | MS.gene013113:CDS | 35.0% | |
| TGAGACAATTTACGATGAGA+AGG | + | 23849:10943-10962 | None:intergenic | 35.0% | |
| TTGGATGTATGAGATTGTGA+GGG | + | 23849:11086-11105 | None:intergenic | 35.0% | |
| TTGTGCTTCATCGTTATTGT+CGG | - | 23849:12221-12240 | MS.gene013113:CDS | 35.0% | |
| ! | TGGCTTTTAATGCGTTAATG+TGG | - | 23849:12163-12182 | MS.gene013113:CDS | 35.0% |
| ! | TGTCACTTGTACTTTCTCTT+TGG | - | 23849:12328-12347 | MS.gene013113:CDS | 35.0% |
| AAGCACTTACTATGTTGTGC+TGG | - | 23849:12143-12162 | MS.gene013113:CDS | 40.0% | |
| AGAGATGGGTCAAACTATAG+AGG | - | 23849:12422-12441 | MS.gene013113:CDS | 40.0% | |
| AGAGCAGAAAAGAAGAAACG+TGG | - | 23849:12390-12409 | MS.gene013113:CDS | 40.0% | |
| AGATGGGTCAAACTATAGAG+GGG | - | 23849:12424-12443 | MS.gene013113:CDS | 40.0% | |
| ATATTAGCCCTAGGTAACTC+CGG | - | 23849:10962-10981 | MS.gene013113:CDS | 40.0% | |
| ATGCGTCTCTATTTCATCCA+CGG | - | 23849:10998-11017 | MS.gene013113:CDS | 40.0% | |
| CACTTGTACTTTCTCTTTGG+GGG | - | 23849:12331-12350 | MS.gene013113:CDS | 40.0% | |
| GACGACTATCTATACGCATA+TGG | - | 23849:11238-11257 | MS.gene013113:intron | 40.0% | |
| GAGATGGGTCAAACTATAGA+GGG | - | 23849:12423-12442 | MS.gene013113:CDS | 40.0% | |
| GTATAGATAGTCGTCAAGAC+CGG | + | 23849:11233-11252 | None:intergenic | 40.0% | |
| GTTGGATGTATGAGATTGTG+AGG | + | 23849:11087-11106 | None:intergenic | 40.0% | |
| TAGAAGAGAGTCTCCTTCAT+AGG | + | 23849:11981-12000 | None:intergenic | 40.0% | |
| TGGATGTATGAGATTGTGAG+GGG | + | 23849:11085-11104 | None:intergenic | 40.0% | |
| TGTGCTTCATCGTTATTGTC+GGG | - | 23849:12222-12241 | MS.gene013113:CDS | 40.0% | |
| TTATAAACCAACTCAACCGC+AGG | + | 23849:11520-11539 | None:intergenic | 40.0% | |
| TTCTCCTAGCCCAAAATTTC+TGG | + | 23849:12124-12143 | None:intergenic | 40.0% | |
| ! | AATGTGGCAAGCGTTTTTCT+TGG | - | 23849:12179-12198 | MS.gene013113:CDS | 40.0% |
| ! | ACGTTTCTTCTTTTCTGCTC+TGG | + | 23849:12391-12410 | None:intergenic | 40.0% |
| ! | ATGTGGCAAGCGTTTTTCTT+GGG | - | 23849:12180-12199 | MS.gene013113:CDS | 40.0% |
| ! | CAAGGGAAGCCAGAAATTTT+GGG | - | 23849:12112-12131 | MS.gene013113:CDS | 40.0% |
| ! | TGCTGTGTTGTTACCACTAA+CGG | - | 23849:12254-12273 | MS.gene013113:CDS | 40.0% |
| !! | GCCATTGTTTTGCTTACTGT+TGG | - | 23849:11376-11395 | MS.gene013113:intron | 40.0% |
| !! | GGGTTTGTGTCCTATTTCTA+TGG | - | 23849:12351-12370 | MS.gene013113:CDS | 40.0% |
| !! | TCACAAGTGTGGTGTTGTAT+CGG | + | 23849:11843-11862 | None:intergenic | 40.0% |
| !!! | GTATGGATTTGTTTTGCCTG+CGG | - | 23849:11501-11520 | MS.gene013113:intron | 40.0% |
| AATGAGCATCAAGGGGAAAC+CGG | + | 23849:11062-11081 | None:intergenic | 45.0% | |
| AGCATCTCAGCTTGGTTTCA+CGG | - | 23849:11300-11319 | MS.gene013113:intron | 45.0% | |
| TATACGCATATGGCGTTGCT+CGG | - | 23849:11248-11267 | MS.gene013113:intron | 45.0% | |
| ! | CCAAGGGAAGCCAGAAATTT+TGG | - | 23849:12111-12130 | MS.gene013113:CDS | 45.0% |
| ! | GAAGCCAGAAATTTTGGGCT+AGG | - | 23849:12117-12136 | MS.gene013113:CDS | 45.0% |
| ! | GCGTTTTTCTTGGGAGCTAT+TGG | - | 23849:12189-12208 | MS.gene013113:CDS | 45.0% |
| ! | GTTACCACTAACGGAAGTGT+TGG | - | 23849:12263-12282 | MS.gene013113:CDS | 45.0% |
| ! | GTTGCTGCTTCTGCATTGTA+TGG | - | 23849:11484-11503 | MS.gene013113:intron | 45.0% |
| ! | GTTTTGCTTACTGTTGGAGC+TGG | - | 23849:11382-11401 | MS.gene013113:intron | 45.0% |
| ! | TACTGTTGGAGCTGGTGTTT+TGG | - | 23849:11390-11409 | MS.gene013113:intron | 45.0% |
| ! | TAGTTTTTCTGCAGGGGAGA+TGG | + | 23849:11152-11171 | None:intergenic | 45.0% |
| ! | TGTTTTGCAGAAACACCAGC+AGG | + | 23849:11439-11458 | None:intergenic | 45.0% |
| !! | CCAAAATTTCTGGCTTCCCT+TGG | + | 23849:12114-12133 | None:intergenic | 45.0% |
| AAGGCGGCTGCGAAGAAAAT+AGG | + | 23849:11196-11215 | None:intergenic | 50.0% | |
| ACTGCCAACACTTCCGTTAG+TGG | + | 23849:12270-12289 | None:intergenic | 50.0% | |
| CGAAACCTAGACCTAGACAC+CGG | + | 23849:11911-11930 | None:intergenic | 50.0% | |
| CGTCTCTATTTCATCCACGG+TGG | - | 23849:11001-11020 | MS.gene013113:CDS | 50.0% | |
| GAAACCTAGACCTAGACACC+GGG | + | 23849:11910-11929 | None:intergenic | 50.0% | |
| GCCACTCTCTTCTGTGTCAT+AGG | - | 23849:11604-11623 | MS.gene013113:intron | 50.0% | |
| GCCTATGACACAGAAGAGAG+TGG | + | 23849:11608-11627 | None:intergenic | 50.0% | |
| GTGAGGGGAATGAGCATCAA+GGG | + | 23849:11070-11089 | None:intergenic | 50.0% | |
| TCACATGTTAGTGTCGTGCC+CGG | - | 23849:11889-11908 | MS.gene013113:CDS | 50.0% | |
| TGAGGGGAATGAGCATCAAG+GGG | + | 23849:11069-11088 | None:intergenic | 50.0% | |
| TGTGAGGGGAATGAGCATCA+AGG | + | 23849:11071-11090 | None:intergenic | 50.0% | |
| ! | GTGACACCCCTTTTTCTGCT+TGG | + | 23849:12314-12333 | None:intergenic | 50.0% |
| ! | TGTTTTGCCTGCGGTTGAGT+TGG | - | 23849:11510-11529 | MS.gene013113:intron | 50.0% |
| !! | TGTGGTGTTGTATCGGACAC+TGG | + | 23849:11836-11855 | None:intergenic | 50.0% |
| ACCGGTGAGGATTCCGACAA+AGG | + | 23849:11215-11234 | None:intergenic | 55.0% | |
| ACGAGTAGTGATCGTCCTGC+TGG | - | 23849:11421-11440 | MS.gene013113:intron | 55.0% | |
| ACGCATTATGAGGGGACCAC+CGG | + | 23849:10984-11003 | None:intergenic | 55.0% | |
| CAATGCAGAAGCAGCAACCG+TGG | + | 23849:11482-11501 | None:intergenic | 55.0% | |
| GATAGTCGTCAAGACCGGTG+AGG | + | 23849:11228-11247 | None:intergenic | 55.0% | |
| GCCTTTGTCGGAATCCTCAC+CGG | - | 23849:11211-11230 | MS.gene013113:CDS | 55.0% | |
| GCGGCTGCGAAGAAAATAGG+TGG | + | 23849:11193-11212 | None:intergenic | 55.0% | |
| GGTGAGGATTCCGACAAAGG+CGG | + | 23849:11212-11231 | None:intergenic | 55.0% | |
| TTAGCCCTAGGTAACTCCGG+TGG | - | 23849:10965-10984 | MS.gene013113:CDS | 55.0% | |
| TTCTGCAGGGGAGATGGAGA+TGG | + | 23849:11146-11165 | None:intergenic | 55.0% | |
| TTCTTCGCAGCCGCCTTTGT+CGG | - | 23849:11199-11218 | MS.gene013113:CDS | 55.0% | |
| !! | ATGGAGATGGTGGTGGATGG+TGG | + | 23849:11133-11152 | None:intergenic | 55.0% |
| !! | GAGATGGAGATGGTGGTGGA+TGG | + | 23849:11136-11155 | None:intergenic | 55.0% |
| AGGGGAAACCGGCGGTTTCA+AGG | + | 23849:11051-11070 | None:intergenic | 60.0% | |
| GAAACCGGCGGTTTCAAGGC+AGG | + | 23849:11047-11066 | None:intergenic | 60.0% | |
| GAGCATCAAGGGGAAACCGG+CGG | + | 23849:11059-11078 | None:intergenic | 60.0% | |
| GGGACCACCGGAGTTACCTA+GGG | + | 23849:10972-10991 | None:intergenic | 60.0% | |
| TAGTGTCGTGCCCGGTGTCT+AGG | - | 23849:11897-11916 | MS.gene013113:CDS | 60.0% | |
| TGCAGGGGAGATGGAGATGG+TGG | + | 23849:11143-11162 | None:intergenic | 60.0% | |
| ! | AGGGGAGATGGAGATGGTGG+TGG | + | 23849:11140-11159 | None:intergenic | 60.0% |
| !! | GAGATGGTGGTGGATGGTGG+AGG | + | 23849:11130-11149 | None:intergenic | 60.0% |
| !! | TGGATGGTGGAGGATGGTGG+CGG | + | 23849:11120-11139 | None:intergenic | 60.0% |
| !! | TGGTGGATGGTGGAGGATGG+TGG | + | 23849:11123-11142 | None:intergenic | 60.0% |
| !! | TGGTGGTGGATGGTGGAGGA+TGG | + | 23849:11126-11145 | None:intergenic | 60.0% |
| ACCGGCGGTTTCAAGGCAGG+CGG | + | 23849:11044-11063 | None:intergenic | 65.0% | |
| AGGCGGAGAGCCAGACACGT+TGG | + | 23849:11027-11046 | None:intergenic | 65.0% | |
| CGTGCCCGGTGTCTAGGTCT+AGG | - | 23849:11903-11922 | MS.gene013113:CDS | 65.0% | |
| GGGGACCACCGGAGTTACCT+AGG | + | 23849:10973-10992 | None:intergenic | 65.0% | |
| TCCACGGTGGCCAACGTGTC+TGG | - | 23849:11014-11033 | MS.gene013113:CDS | 65.0% | |
| TCCGCCTGCCTTGAAACCGC+CGG | - | 23849:11040-11059 | MS.gene013113:CDS | 65.0% | |
| !! | GTGGAGGATGGTGGCGGTGA+CGG | + | 23849:11114-11133 | None:intergenic | 65.0% |
| GCCAGACACGTTGGCCACCG+TGG | + | 23849:11018-11037 | None:intergenic | 70.0% | |
| ! | GGTGGCGGTGACGGCAGCGT+TGG | + | 23849:11105-11124 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 23849 | gene | 10893 | 12461 | 10893 | ID=MS.gene013113 |
| 23849 | mRNA | 10893 | 12461 | 10893 | ID=MS.gene013113.t1;Parent=MS.gene013113 |
| 23849 | exon | 11703 | 12461 | 11703 | ID=MS.gene013113.t1.exon1;Parent=MS.gene013113.t1 |
| 23849 | CDS | 11703 | 12461 | 11703 | ID=cds.MS.gene013113.t1;Parent=MS.gene013113.t1 |
| 23849 | exon | 10893 | 11249 | 10893 | ID=MS.gene013113.t1.exon2;Parent=MS.gene013113.t1 |
| 23849 | CDS | 10893 | 11249 | 10893 | ID=cds.MS.gene013113.t1;Parent=MS.gene013113.t1 |
| Gene Sequence |
| Protein sequence |
