Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene013286.t1 | XP_003602659.1 | 91.7 | 360 | 27 | 1 | 15 | 374 | 27 | 383 | 2.00E-191 | 678.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene013286.t1 | Q94AQ6 | 74.6 | 346 | 88 | 0 | 29 | 374 | 28 | 373 | 4.9e-154 | 545.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene013286.t1 | G8A1N0 | 91.7 | 360 | 27 | 1 | 15 | 374 | 27 | 383 | 1.4e-191 | 678.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene039628 | MS.gene013286 | PPI |
MS.gene013286 | MS.gene88462 | PPI |
MS.gene61079 | MS.gene013286 | PPI |
MS.gene013286 | MS.gene93729 | PPI |
MS.gene63929 | MS.gene013286 | PPI |
MS.gene046213 | MS.gene013286 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene013286.t1 | MTR_3g096710 | 91.667 | 360 | 27 | 1 | 15 | 374 | 27 | 383 | 0.0 | 672 |
MS.gene013286.t1 | MTR_3g096710 | 90.675 | 311 | 26 | 1 | 15 | 325 | 27 | 334 | 0.0 | 598 |
MS.gene013286.t1 | MTR_3g096710 | 90.645 | 310 | 26 | 1 | 15 | 324 | 27 | 333 | 0.0 | 597 |
MS.gene013286.t1 | MTR_3g096710 | 89.219 | 269 | 26 | 1 | 15 | 283 | 27 | 292 | 0.0 | 515 |
MS.gene013286.t1 | MTR_3g096710 | 92.181 | 243 | 19 | 0 | 83 | 325 | 14 | 256 | 2.42e-171 | 478 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene013286.t1 | AT5G09230 | 74.000 | 350 | 91 | 0 | 25 | 374 | 27 | 376 | 0.0 | 555 |
MS.gene013286.t1 | AT5G09230 | 74.000 | 350 | 91 | 0 | 25 | 374 | 5 | 354 | 0.0 | 555 |
MS.gene013286.t1 | AT5G09230 | 74.000 | 350 | 91 | 0 | 25 | 374 | 24 | 373 | 0.0 | 555 |
MS.gene013286.t1 | AT5G09230 | 74.000 | 350 | 91 | 0 | 25 | 374 | 24 | 373 | 0.0 | 555 |
MS.gene013286.t1 | AT5G09230 | 72.757 | 301 | 82 | 0 | 25 | 325 | 24 | 324 | 3.47e-169 | 475 |
MS.gene013286.t1 | AT5G09230 | 80.000 | 245 | 49 | 0 | 130 | 374 | 27 | 271 | 7.14e-149 | 421 |
MS.gene013286.t1 | AT5G09230 | 80.000 | 245 | 49 | 0 | 130 | 374 | 27 | 271 | 7.14e-149 | 421 |
Find 96 sgRNAs with CRISPR-Local
Find 387 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGGATACCTATCGACATTT+TGG | 0.150792 | 3.4:+87499654 | None:intergenic |
GGCAGAAGCAATTGAAAATT+TGG | 0.197656 | 3.4:-87498258 | MS.gene013286:CDS |
AATTGCTGACCTTTGGATTA+AGG | 0.201173 | 3.4:+87499419 | None:intergenic |
TGGCTCACCTGGTGGGTTAT+TGG | 0.229869 | 3.4:+87500411 | None:intergenic |
CCTAATGGTGCTTATAGTTC+TGG | 0.247110 | 3.4:-87500441 | MS.gene013286:CDS |
GCCGAGCCAGGAGGAGATAT+TGG | 0.270807 | 3.4:-87499784 | MS.gene013286:CDS |
TCTTTGTAGAAGCTTATTTC+AGG | 0.271782 | 3.4:-87499455 | MS.gene013286:CDS |
TGAGAACACCATTGCACTTC+TGG | 0.276909 | 3.4:+87498126 | None:intergenic |
TCGTTTACCGGGAAGGTTCC+GGG | 0.277593 | 3.4:+87501588 | None:intergenic |
ATACAGAAGGTTGACATCTT+TGG | 0.302545 | 3.4:+87501500 | None:intergenic |
GATATAAACCGTCCTCCTTT+TGG | 0.309502 | 3.4:+87501660 | None:intergenic |
ACAGTCCCATGTAATTCTAA+TGG | 0.310751 | 3.4:+87499511 | None:intergenic |
GCCATATCGGCTCTTTCCTT+TGG | 0.319141 | 3.4:+87496954 | None:intergenic |
TAATGTCATGAGGGATAAAA+AGG | 0.331600 | 3.4:-87501550 | MS.gene013286:CDS |
ATCGTTTACCGGGAAGGTTC+CGG | 0.336419 | 3.4:+87501587 | None:intergenic |
ATTATTTATTTCAGCCCTAA+TGG | 0.338167 | 3.4:-87500456 | MS.gene013286:intron |
ATTGCTGACCTTTGGATTAA+GGG | 0.339352 | 3.4:+87499420 | None:intergenic |
ATCTGCTGCTCATTGTGCTT+TGG | 0.346640 | 3.4:-87499717 | MS.gene013286:CDS |
CCAGAACTATAAGCACCATT+AGG | 0.359965 | 3.4:+87500441 | None:intergenic |
CATTGCACTTCTGGCAGGTT+GGG | 0.375793 | 3.4:+87498135 | None:intergenic |
TCCAAAGGAAAGAGCCGATA+TGG | 0.377429 | 3.4:-87496955 | MS.gene013286:CDS |
AGATGCTTCCATTGCCATAT+CGG | 0.402207 | 3.4:+87496941 | None:intergenic |
TTGGATTAAGGGACTTCAAC+TGG | 0.402388 | 3.4:+87499431 | None:intergenic |
TGTCTGACCCAGGGCTTCCA+TGG | 0.409403 | 3.4:+87498234 | None:intergenic |
GGGTAACCATAAAATCAATT+CGG | 0.413467 | 3.4:+87499675 | None:intergenic |
ATTATGAAGGTTGTCTTCTT+CGG | 0.414780 | 3.4:-87496987 | MS.gene013286:intron |
CAGTCCCATGTAATTCTAAT+GGG | 0.420290 | 3.4:+87499512 | None:intergenic |
CACAGGGCAGCTCATGAGGC+TGG | 0.421023 | 3.4:-87496685 | MS.gene013286:intron |
CAGAACTATAAGCACCATTA+GGG | 0.432825 | 3.4:+87500442 | None:intergenic |
CCCAATATCTCCTCCTGGCT+CGG | 0.435419 | 3.4:+87499783 | None:intergenic |
AGGCAGAACCTTCTATAGTC+AGG | 0.437249 | 3.4:+87501317 | None:intergenic |
CCGAGCCAGGAGGAGATATT+GGG | 0.437495 | 3.4:-87499783 | MS.gene013286:CDS |
CTCCTTGTATTGACTGGAGC+TGG | 0.441040 | 3.4:-87501362 | MS.gene013286:CDS |
AGGTTGACATCTTTGGTAGT+AGG | 0.442715 | 3.4:+87501507 | None:intergenic |
TTGAAAATCAATGCACGATT+GGG | 0.448631 | 3.4:-87496607 | MS.gene013286:CDS |
TATTGGGCTAGAAGCTATGC+TGG | 0.460514 | 3.4:-87499767 | MS.gene013286:CDS |
TTCACGATTTGCGCTCGCAT+TGG | 0.462725 | 3.4:+87502102 | None:intergenic |
TTCTTCGTTCAAGCCGAGCC+AGG | 0.462937 | 3.4:-87499796 | MS.gene013286:CDS |
AATTTGGACCATGGAAGCCC+TGG | 0.472279 | 3.4:-87498242 | MS.gene013286:CDS |
TTGGCAGCTTTCGAGAAAGC+TGG | 0.476655 | 3.4:-87499698 | MS.gene013286:CDS |
CCTGGGTCAGACAAAAGCTT+TGG | 0.483143 | 3.4:-87498224 | MS.gene013286:CDS |
ACCAAGCTCCTTGTATTGAC+TGG | 0.492188 | 3.4:-87501368 | MS.gene013286:CDS |
CCATTGCACTTCTGGCAGGT+TGG | 0.492755 | 3.4:+87498134 | None:intergenic |
AACTTTGAGCTGTTGAACTC+AGG | 0.496037 | 3.4:+87501694 | None:intergenic |
GATCCCATGTCAAGTACTCT+TGG | 0.502273 | 3.4:+87496474 | None:intergenic |
CGTTTACCGGGAAGGTTCCG+GGG | 0.502356 | 3.4:+87501589 | None:intergenic |
TGAGTTCAACAGCTCAAAGT+TGG | 0.507220 | 3.4:-87501692 | MS.gene013286:CDS |
AACACCATTGCACTTCTGGC+AGG | 0.512011 | 3.4:+87498130 | None:intergenic |
GTGCCTTTGGCTCACCTGGT+GGG | 0.513441 | 3.4:+87500404 | None:intergenic |
GTGGTATCCCTGACTATAGA+AGG | 0.513648 | 3.4:-87501325 | MS.gene013286:intron |
GTAGTAGGAGGATCTGCATC+AGG | 0.514883 | 3.4:+87501522 | None:intergenic |
AGTTGCCCATTAGAATTACA+TGG | 0.518703 | 3.4:-87499517 | MS.gene013286:CDS |
TTCAGGCTGCACCATCGAGC+TGG | 0.518999 | 3.4:-87499541 | MS.gene013286:intron |
TCAATCTCAATATCACCATC+AGG | 0.519126 | 3.4:+87498188 | None:intergenic |
AGTTGGAACTTAGCACCAAA+AGG | 0.533341 | 3.4:-87501675 | MS.gene013286:CDS |
GCACTTCTGGCAGGTTGGGA+TGG | 0.534673 | 3.4:+87498139 | None:intergenic |
TTCCAGCTCCAGTCAATACA+AGG | 0.535675 | 3.4:+87501360 | None:intergenic |
CTTGAAAATCAATGCACGAT+TGG | 0.538004 | 3.4:-87496608 | MS.gene013286:CDS |
GCAATTGAAAATTTGGACCA+TGG | 0.538406 | 3.4:-87498251 | MS.gene013286:CDS |
TCCAGTCAATACAAGGAGCT+TGG | 0.539077 | 3.4:+87501367 | None:intergenic |
TCTAGCCCAATATCTCCTCC+TGG | 0.545671 | 3.4:+87499778 | None:intergenic |
TTGACATCTTTGGTAGTAGG+AGG | 0.555544 | 3.4:+87501510 | None:intergenic |
GCTACTGCAATCGTCAATGT+AGG | 0.564103 | 3.4:-87496658 | MS.gene013286:CDS |
AATCAATGCACGATTGGGTG+AGG | 0.568540 | 3.4:-87496602 | MS.gene013286:intron |
TTACACAGCAGGGACGCTGA+TGG | 0.576090 | 3.4:+87496452 | None:intergenic |
CTTCGGTGATAATGTTCCAA+AGG | 0.576117 | 3.4:-87496970 | MS.gene013286:CDS |
TGGTTACCCAAAATGTCGAT+AGG | 0.577299 | 3.4:-87499661 | MS.gene013286:intron |
ACTGTAATTTGTATAGATTG+TGG | 0.577480 | 3.4:-87499484 | MS.gene013286:CDS |
TCATGTCGAATCTCTGCCCC+CGG | 0.578244 | 3.4:-87501606 | MS.gene013286:CDS |
GGCAGAACCTTCTATAGTCA+GGG | 0.579622 | 3.4:+87501318 | None:intergenic |
CTAGAAGCTATGCTGGGTGG+AGG | 0.585143 | 3.4:-87499760 | MS.gene013286:CDS |
ATTGAAAATAATAACATGGA+CGG | 0.594409 | 3.4:+87502073 | None:intergenic |
AAAGCACAATGAGCAGCAGA+TGG | 0.598287 | 3.4:+87499719 | None:intergenic |
GTTTACCGGGAAGGTTCCGG+GGG | 0.606936 | 3.4:+87501590 | None:intergenic |
GGAAAGAGCCGATATGGCAA+TGG | 0.608710 | 3.4:-87496949 | MS.gene013286:CDS |
ATTTGGACCATGGAAGCCCT+GGG | 0.613997 | 3.4:-87498241 | MS.gene013286:CDS |
AAGCTCAGACTAATGTCATG+AGG | 0.614735 | 3.4:-87501560 | MS.gene013286:CDS |
AGCTCAGACTAATGTCATGA+GGG | 0.617233 | 3.4:-87501559 | MS.gene013286:CDS |
ATGGGCAACTACCAGCTCGA+TGG | 0.623152 | 3.4:+87499530 | None:intergenic |
GTTGAAGTCCCTTAATCCAA+AGG | 0.626611 | 3.4:-87499428 | MS.gene013286:intron |
GACAAGTCGAAAAGCAGACA+TGG | 0.628662 | 3.4:+87496875 | None:intergenic |
AAAGCTTTGGAATGAAACAA+AGG | 0.629664 | 3.4:-87498211 | MS.gene013286:CDS |
GGAACCTTCCCGGTAAACGA+TGG | 0.634258 | 3.4:-87501585 | MS.gene013286:CDS |
GGAATGAAACAAAGGCCTGA+TGG | 0.637139 | 3.4:-87498203 | MS.gene013286:CDS |
CCAACCTGCCAGAAGTGCAA+TGG | 0.637167 | 3.4:-87498134 | MS.gene013286:CDS |
GTTGCCCATTAGAATTACAT+GGG | 0.644261 | 3.4:-87499516 | MS.gene013286:CDS |
ATTGGGCTAGAAGCTATGCT+GGG | 0.649223 | 3.4:-87499766 | MS.gene013286:CDS |
GCTGGAATCAGTACAGAATG+TGG | 0.649750 | 3.4:-87501344 | MS.gene013286:CDS |
ACTTAGCACCAAAAGGAGGA+CGG | 0.658830 | 3.4:-87501668 | MS.gene013286:CDS |
TTTCAGACCAATAACCCACC+AGG | 0.665283 | 3.4:-87500418 | MS.gene013286:intron |
TTCGTTCAAGCCGAGCCAGG+AGG | 0.674610 | 3.4:-87499793 | MS.gene013286:CDS |
ATTGCCAAGAGTACTTGACA+TGG | 0.677222 | 3.4:-87496478 | MS.gene013286:CDS |
TTGCCAAGAGTACTTGACAT+GGG | 0.680131 | 3.4:-87496477 | MS.gene013286:CDS |
TGGAACTTAGCACCAAAAGG+AGG | 0.686371 | 3.4:-87501672 | MS.gene013286:CDS |
GGGCTAGAAGCTATGCTGGG+TGG | 0.690768 | 3.4:-87499763 | MS.gene013286:CDS |
ATGAGCAGCAGATGGCTGTG+CGG | 0.691254 | 3.4:+87499727 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GTAAAATTTCTTAAATATTA+TGG | - | chr3.4:87498320-87498339 | MS.gene013286:intron | 10.0% |
!! | AATTAACCTAATAATAATGA+TGG | + | chr3.4:87497271-87497290 | None:intergenic | 15.0% |
!! | ACATTTATATTGAAGATTTA+TGG | - | chr3.4:87498564-87498583 | MS.gene013286:intron | 15.0% |
!! | ACTAAAATTTATTATCATTG+AGG | - | chr3.4:87498024-87498043 | MS.gene013286:intron | 15.0% |
!! | GGTTAATTGAATTATTTATT+TGG | - | chr3.4:87497283-87497302 | MS.gene013286:intron | 15.0% |
!! | TAATATGTTATTATGTAGAA+AGG | - | chr3.4:87499274-87499293 | MS.gene013286:intron | 15.0% |
!! | TGAAATTGAAAATAATAACA+TGG | + | chr3.4:87496485-87496504 | None:intergenic | 15.0% |
!!! | AATATAGTTCTGATATAAAT+TGG | + | chr3.4:87501042-87501061 | None:intergenic | 15.0% |
!!! | AATTATCAATTCATTTTGTT+GGG | + | chr3.4:87498237-87498256 | None:intergenic | 15.0% |
!!! | ATAATTAACTTGTAATAACT+GGG | - | chr3.4:87500548-87500567 | MS.gene013286:intron | 15.0% |
!!! | ATGAATTGATAATTAATGAA+AGG | - | chr3.4:87498243-87498262 | MS.gene013286:CDS | 15.0% |
!!! | CCTATAAATATTTTAATAGT+GGG | + | chr3.4:87497354-87497373 | None:intergenic | 15.0% |
!!! | TAATTATCAATTCATTTTGT+TGG | + | chr3.4:87498238-87498257 | None:intergenic | 15.0% |
!!! | TAGAAAGTATAAAAAAGAAA+AGG | - | chr3.4:87500781-87500800 | MS.gene013286:intron | 15.0% |
!!! | TCCTATAAATATTTTAATAG+TGG | + | chr3.4:87497355-87497374 | None:intergenic | 15.0% |
!!! | TCTTATATTTTAGTATGTTA+CGG | - | chr3.4:87501128-87501147 | MS.gene013286:intron | 15.0% |
!!! | TGTATGATTTTTTTGAAAAA+AGG | - | chr3.4:87497069-87497088 | MS.gene013286:intron | 15.0% |
!! | AAAAGTAGAAAGAAATGTAT+AGG | - | chr3.4:87499793-87499812 | MS.gene013286:CDS | 20.0% |
!! | AAGTAAATGATAAATGCAAA+AGG | + | chr3.4:87499683-87499702 | None:intergenic | 20.0% |
!! | AATTATGAAGAACAATAATC+TGG | + | chr3.4:87500534-87500553 | None:intergenic | 20.0% |
!! | AATTGATCATGATAAATAAC+TGG | + | chr3.4:87498919-87498938 | None:intergenic | 20.0% |
!! | AGGTATTTACAAAATTACAT+AGG | - | chr3.4:87501699-87501718 | MS.gene013286:CDS | 20.0% |
!! | ATGAATAGAGAAATATTACT+GGG | - | chr3.4:87501421-87501440 | MS.gene013286:intron | 20.0% |
!! | ATTGAAAATAATAACATGGA+CGG | + | chr3.4:87496481-87496500 | None:intergenic | 20.0% |
!! | CCCACTATTAAAATATTTAT+AGG | - | chr3.4:87497351-87497370 | MS.gene013286:intron | 20.0% |
!! | GAGCTAAATATACAATAAAA+TGG | + | chr3.4:87496643-87496662 | None:intergenic | 20.0% |
!! | TATGAATAGAGAAATATTAC+TGG | - | chr3.4:87501420-87501439 | MS.gene013286:intron | 20.0% |
!! | TCTCTTTGACATTATTTAAA+AGG | - | chr3.4:87498729-87498748 | MS.gene013286:intron | 20.0% |
!! | TTAAAGGATTGATAAAATGA+AGG | + | chr3.4:87500169-87500188 | None:intergenic | 20.0% |
!! | TTAAATAATGTCAAAGAGAA+AGG | + | chr3.4:87498728-87498747 | None:intergenic | 20.0% |
!! | TTAATTAGTACTTTGTGAAT+CGG | - | chr3.4:87499751-87499770 | MS.gene013286:CDS | 20.0% |
!! | TTAGAGATATAAACAAAAGA+AGG | + | chr3.4:87497954-87497973 | None:intergenic | 20.0% |
!! | TTTCAAAAAAATCATACAGA+AGG | + | chr3.4:87497067-87497086 | None:intergenic | 20.0% |
!!! | ACTTGCTTATTTTTATTGTT+GGG | - | chr3.4:87498180-87498199 | MS.gene013286:CDS | 20.0% |
!!! | ATAGAATAAAAGTTGTTGTT+TGG | - | chr3.4:87498401-87498420 | MS.gene013286:intron | 20.0% |
!!! | ATATTGCAGATATTTTTCTT+TGG | + | chr3.4:87498347-87498366 | None:intergenic | 20.0% |
!!! | ATTATCAATTCATTTTGTTG+GGG | + | chr3.4:87498236-87498255 | None:intergenic | 20.0% |
!!! | ATTATGGGATAGTTTTTAAA+TGG | - | chr3.4:87500812-87500831 | MS.gene013286:intron | 20.0% |
!!! | CATAATTAACTTGTAATAAC+TGG | - | chr3.4:87500547-87500566 | MS.gene013286:intron | 20.0% |
!!! | CTTATATTTTAGTATGTTAC+GGG | - | chr3.4:87501129-87501148 | MS.gene013286:intron | 20.0% |
!!! | GATAGTTTTTAAATGGTTTT+GGG | - | chr3.4:87500819-87500838 | MS.gene013286:intron | 20.0% |
!!! | TAATTAACTTGTAATAACTG+GGG | - | chr3.4:87500549-87500568 | MS.gene013286:intron | 20.0% |
!!! | TAGAATAAAAGTTGTTGTTT+GGG | - | chr3.4:87498402-87498421 | MS.gene013286:intron | 20.0% |
!!! | TATCGGTAGTTATTTTATAT+TGG | - | chr3.4:87500714-87500733 | MS.gene013286:intron | 20.0% |
!!! | TGATTTGATAGTTTGAAAAT+TGG | - | chr3.4:87497567-87497586 | MS.gene013286:intron | 20.0% |
!!! | TTCTAAATTGTATTTTCACA+GGG | - | chr3.4:87501850-87501869 | MS.gene013286:intron | 20.0% |
!!! | TTTCTAAATTGTATTTTCAC+AGG | - | chr3.4:87501849-87501868 | MS.gene013286:intron | 20.0% |
!!! | TTTGAGATTAATAAGTCATT+TGG | + | chr3.4:87496566-87496585 | None:intergenic | 20.0% |
! | AAACATAGTCATGAAAACTA+AGG | - | chr3.4:87498631-87498650 | MS.gene013286:intron | 25.0% |
! | AACCTAATAATAATGATGGT+AGG | + | chr3.4:87497267-87497286 | None:intergenic | 25.0% |
! | AATATGAAGGGTAAAAACAA+AGG | - | chr3.4:87500660-87500679 | MS.gene013286:intron | 25.0% |
! | AGATAAGACATAATGATTCT+TGG | - | chr3.4:87499329-87499348 | MS.gene013286:intron | 25.0% |
! | AGATGAATGCACAATATAAA+TGG | + | chr3.4:87501222-87501241 | None:intergenic | 25.0% |
! | AGATTGTGATCTGATATATA+AGG | - | chr3.4:87497496-87497515 | MS.gene013286:intron | 25.0% |
! | ATCTATGAGATTGAAAAAGA+TGG | + | chr3.4:87496829-87496848 | None:intergenic | 25.0% |
! | ATTATTTATTTCAGCCCTAA+TGG | - | chr3.4:87498095-87498114 | MS.gene013286:intron | 25.0% |
! | CAGAGAAATTAGATCATTAA+TGG | + | chr3.4:87499731-87499750 | None:intergenic | 25.0% |
! | CTCTTACACAAAAATATGAA+GGG | - | chr3.4:87500648-87500667 | MS.gene013286:intron | 25.0% |
! | TCTCAGGAAATATGTTTAAT+AGG | - | chr3.4:87500034-87500053 | MS.gene013286:intron | 25.0% |
! | TCTCTTACACAAAAATATGA+AGG | - | chr3.4:87500647-87500666 | MS.gene013286:intron | 25.0% |
! | TGATAGTTCACAAATACAAT+AGG | - | chr3.4:87498203-87498222 | MS.gene013286:CDS | 25.0% |
! | TGCTACAATTGGTTATTTAA+TGG | - | chr3.4:87498296-87498315 | MS.gene013286:intron | 25.0% |
! | TTAAATAACCAATTGTAGCA+TGG | + | chr3.4:87498296-87498315 | None:intergenic | 25.0% |
! | TTCCTACCATCATTATTATT+AGG | - | chr3.4:87497262-87497281 | MS.gene013286:intron | 25.0% |
! | TTGACTGTCATTAATTATGA+AGG | - | chr3.4:87501551-87501570 | MS.gene013286:CDS | 25.0% |
!! | AAAAGCATATATCTTTGACT+CGG | + | chr3.4:87497850-87497869 | None:intergenic | 25.0% |
!! | ACTGTAATTTGTATAGATTG+TGG | - | chr3.4:87499067-87499086 | MS.gene013286:intron | 25.0% |
!! | CTATCATTTTGTGTTAGTTA+TGG | - | chr3.4:87499601-87499620 | MS.gene013286:intron | 25.0% |
!! | GGATAGTTTTTAAATGGTTT+TGG | - | chr3.4:87500818-87500837 | MS.gene013286:intron | 25.0% |
!! | GTTTCAAGTATTTAAATCCT+TGG | + | chr3.4:87497730-87497749 | None:intergenic | 25.0% |
!! | TAGAAAGGTTTAAAATGTCA+TGG | - | chr3.4:87499289-87499308 | MS.gene013286:intron | 25.0% |
!! | TGAGATTGACGAAAAATTTT+GGG | - | chr3.4:87500377-87500396 | MS.gene013286:intron | 25.0% |
!! | TTGAGATTGACGAAAAATTT+TGG | - | chr3.4:87500376-87500395 | MS.gene013286:intron | 25.0% |
!!! | ACTTTTAGAGCATAAGATTT+TGG | + | chr3.4:87497918-87497937 | None:intergenic | 25.0% |
!!! | ATATTTTTACTTTGTCTGTG+AGG | - | chr3.4:87501794-87501813 | MS.gene013286:intron | 25.0% |
!!! | CTTTTAGAGCATAAGATTTT+GGG | + | chr3.4:87497917-87497936 | None:intergenic | 25.0% |
!!! | GACTTGCTTATTTTTATTGT+TGG | - | chr3.4:87498179-87498198 | MS.gene013286:CDS | 25.0% |
!!! | GCAATTTGCGTTTATTTTAT+TGG | - | chr3.4:87499149-87499168 | MS.gene013286:intron | 25.0% |
!!! | TAGAAACTGACTTTTATTGA+TGG | + | chr3.4:87500998-87501017 | None:intergenic | 25.0% |
!!! | TTAGTTTTCATGACTATGTT+TGG | + | chr3.4:87498632-87498651 | None:intergenic | 25.0% |
!!! | TTCTATTTTGATTTTGTGCA+CGG | - | chr3.4:87497446-87497465 | MS.gene013286:intron | 25.0% |
!!! | TTGTGTTATATCTTGTTTTC+AGG | - | chr3.4:87498993-87499012 | MS.gene013286:intron | 25.0% |
AATCTGGCACAAAATAAACA+GGG | + | chr3.4:87500518-87500537 | None:intergenic | 30.0% | |
ACAAGATATAACACAACTCA+AGG | + | chr3.4:87498989-87499008 | None:intergenic | 30.0% | |
AGTTTGTAAATCTGATAGAG+TGG | - | chr3.4:87500598-87500617 | MS.gene013286:intron | 30.0% | |
ATATATCAGATCACAATCTG+CGG | + | chr3.4:87497495-87497514 | None:intergenic | 30.0% | |
ATCAAATCATATCACCTACA+TGG | + | chr3.4:87497556-87497575 | None:intergenic | 30.0% | |
ATGATCAATTAAGCCTTCTT+AGG | - | chr3.4:87498929-87498948 | MS.gene013286:intron | 30.0% | |
ATGCAACACATTACCATTAA+AGG | + | chr3.4:87497663-87497682 | None:intergenic | 30.0% | |
ATTATGAAGGTTGTCTTCTT+CGG | - | chr3.4:87501564-87501583 | MS.gene013286:CDS | 30.0% | |
ATTGCTTGCAAGATTAAAGA+TGG | + | chr3.4:87499973-87499992 | None:intergenic | 30.0% | |
CAAAAATCAGAAGAAACTTG+TGG | + | chr3.4:87500227-87500246 | None:intergenic | 30.0% | |
CAATCCTTTAACGTAATAGT+TGG | - | chr3.4:87500178-87500197 | MS.gene013286:intron | 30.0% | |
CACTAAATGACAATGACTAA+TGG | + | chr3.4:87497826-87497845 | None:intergenic | 30.0% | |
CATGAAAACTAAGGAATTCA+AGG | - | chr3.4:87498640-87498659 | MS.gene013286:intron | 30.0% | |
CTAACATATGTTCATCCTTA+TGG | - | chr3.4:87497970-87497989 | MS.gene013286:intron | 30.0% | |
CTTAAACTCAAATACTACGA+TGG | + | chr3.4:87498701-87498720 | None:intergenic | 30.0% | |
GATATTTGCATCTTGACAAA+AGG | - | chr3.4:87498437-87498456 | MS.gene013286:intron | 30.0% | |
GGGTAACCATAAAATCAATT+CGG | + | chr3.4:87498879-87498898 | None:intergenic | 30.0% | |
TAAGACATAATGATTCTTGG+TGG | - | chr3.4:87499332-87499351 | MS.gene013286:intron | 30.0% | |
TAATCTGGCACAAAATAAAC+AGG | + | chr3.4:87500519-87500538 | None:intergenic | 30.0% | |
TAATGTCATGAGGGATAAAA+AGG | - | chr3.4:87497001-87497020 | MS.gene013286:intron | 30.0% | |
TCTTTGTAGAAGCTTATTTC+AGG | - | chr3.4:87499096-87499115 | MS.gene013286:intron | 30.0% | |
TGAAACTGAGAAAACTTTGT+GGG | + | chr3.4:87497522-87497541 | None:intergenic | 30.0% | |
TGCTTCTTTCAGTTATATGT+CGG | - | chr3.4:87500467-87500486 | MS.gene013286:intron | 30.0% | |
TGTTTCTTCAAGCTAAATCA+TGG | + | chr3.4:87501365-87501384 | None:intergenic | 30.0% | |
TTCAAACTGAAATTCAGTCA+AGG | + | chr3.4:87497155-87497174 | None:intergenic | 30.0% | |
TTGAAAATCAATGCACGATT+GGG | - | chr3.4:87501944-87501963 | MS.gene013286:intron | 30.0% | |
TTGAAGATTTATGGCAATGA+CGG | - | chr3.4:87498573-87498592 | MS.gene013286:intron | 30.0% | |
TTTAGATACCATGCTACAAT+TGG | - | chr3.4:87498285-87498304 | MS.gene013286:intron | 30.0% | |
! | ATAAGTACATGGTGTGTTTT+TGG | - | chr3.4:87501327-87501346 | MS.gene013286:CDS | 30.0% |
! | ATGCAACAGTTTGTTCAAAT+TGG | + | chr3.4:87502044-87502063 | None:intergenic | 30.0% |
! | CATTAGTCATTGTCATTTAG+TGG | - | chr3.4:87497824-87497843 | MS.gene013286:intron | 30.0% |
! | GAAATTACTTGCTGCATATT+TGG | - | chr3.4:87501816-87501835 | MS.gene013286:intron | 30.0% |
! | GTTGTTTGGGTTAATTGAAT+AGG | - | chr3.4:87498415-87498434 | MS.gene013286:intron | 30.0% |
! | TCACTTTCTCAACGTATTTT+TGG | - | chr3.4:87497099-87497118 | MS.gene013286:intron | 30.0% |
! | TGCAACAGTTTGTTCAAATT+GGG | + | chr3.4:87502043-87502062 | None:intergenic | 30.0% |
! | TTAATAGTGGGAATATCAAG+TGG | + | chr3.4:87497342-87497361 | None:intergenic | 30.0% |
!! | AAAGCTTTGGAATGAAACAA+AGG | - | chr3.4:87500340-87500359 | MS.gene013286:intron | 30.0% |
!! | ACTTGTTTGACTTCTTTTTG+TGG | - | chr3.4:87500687-87500706 | MS.gene013286:intron | 30.0% |
!! | ATAAGAGTATTGTTCTCTGA+TGG | - | chr3.4:87499626-87499645 | MS.gene013286:intron | 30.0% |
!! | GATGATAGTTGTAGTTTGTT+AGG | - | chr3.4:87499354-87499373 | MS.gene013286:intron | 30.0% |
!!! | AATCGTGCATTGATTTTCAA+GGG | + | chr3.4:87501944-87501963 | None:intergenic | 30.0% |
!!! | AGTTTTTAAATGGTTTTGGG+AGG | - | chr3.4:87500822-87500841 | MS.gene013286:intron | 30.0% |
!!! | GATAGAGGCAGATTATTTTT+TGG | - | chr3.4:87499572-87499591 | MS.gene013286:intron | 30.0% |
!!! | GCATAAGATTTTGGGATAAT+TGG | + | chr3.4:87497909-87497928 | None:intergenic | 30.0% |
!!! | GTTTTTAAATGGTTTTGGGA+GGG | - | chr3.4:87500823-87500842 | MS.gene013286:intron | 30.0% |
AAACCATTTGGAAGCTTTCA+TGG | + | chr3.4:87499867-87499886 | None:intergenic | 35.0% | |
AACAGGAAAAATAGTTGCCA+AGG | + | chr3.4:87501164-87501183 | None:intergenic | 35.0% | |
AACAGTCTCTTAAGTTTCTC+AGG | - | chr3.4:87500018-87500037 | MS.gene013286:intron | 35.0% | |
AATAAAGCAGAGAGTAAGGA+AGG | + | chr3.4:87496797-87496816 | None:intergenic | 35.0% | |
AATCCATGAAAGCTTCCAAA+TGG | - | chr3.4:87499861-87499880 | MS.gene013286:intron | 35.0% | |
AATTGCTGACCTTTGGATTA+AGG | + | chr3.4:87499135-87499154 | None:intergenic | 35.0% | |
ACAGTCCCATGTAATTCTAA+TGG | + | chr3.4:87499043-87499062 | None:intergenic | 35.0% | |
AGAAAAGGAGAACGTGATTA+TGG | - | chr3.4:87500796-87500815 | MS.gene013286:intron | 35.0% | |
AGAGAAGTTAAACAGTGTAG+TGG | - | chr3.4:87499524-87499543 | MS.gene013286:CDS | 35.0% | |
AGCTCCAACTATTACGTTAA+AGG | + | chr3.4:87500185-87500204 | None:intergenic | 35.0% | |
AGTATGTATATGTGGCAAAG+GGG | - | chr3.4:87497684-87497703 | MS.gene013286:intron | 35.0% | |
AGTTGCCCATTAGAATTACA+TGG | - | chr3.4:87499034-87499053 | MS.gene013286:intron | 35.0% | |
ATAAAGCAGAGAGTAAGGAA+GGG | + | chr3.4:87496796-87496815 | None:intergenic | 35.0% | |
ATACAGAAGGTTGACATCTT+TGG | + | chr3.4:87497054-87497073 | None:intergenic | 35.0% | |
ATATAACACAACTCAAGGAC+AGG | + | chr3.4:87498984-87499003 | None:intergenic | 35.0% | |
ATATAGCATTCGTAAACCGA+TGG | - | chr3.4:87497392-87497411 | MS.gene013286:intron | 35.0% | |
ATATCTCGAGTATCCTAAGA+AGG | + | chr3.4:87498945-87498964 | None:intergenic | 35.0% | |
ATCAGGTCTCTCAAATTTCT+TGG | - | chr3.4:87500879-87500898 | MS.gene013286:intron | 35.0% | |
ATGAAAGCTTCCAAATGGTT+TGG | - | chr3.4:87499866-87499885 | MS.gene013286:intron | 35.0% | |
ATGTGATCAGAAGTGATAAG+TGG | + | chr3.4:87500066-87500085 | None:intergenic | 35.0% | |
ATTGCTGACCTTTGGATTAA+GGG | + | chr3.4:87499134-87499153 | None:intergenic | 35.0% | |
ATTTGGATTGAGAAAGAGAG+AGG | + | chr3.4:87496549-87496568 | None:intergenic | 35.0% | |
CAATTCTGAGCATAACTTCA+TGG | + | chr3.4:87497319-87497338 | None:intergenic | 35.0% | |
CAGAACTATAAGCACCATTA+GGG | + | chr3.4:87498112-87498131 | None:intergenic | 35.0% | |
CAGTATGTATATGTGGCAAA+GGG | - | chr3.4:87497683-87497702 | MS.gene013286:intron | 35.0% | |
CAGTCCCATGTAATTCTAAT+GGG | + | chr3.4:87499042-87499061 | None:intergenic | 35.0% | |
CAGTTTCCTTGCAAATACAA+AGG | + | chr3.4:87496721-87496740 | None:intergenic | 35.0% | |
CTAATATGTGGTCTTTCAAC+TGG | - | chr3.4:87500090-87500109 | MS.gene013286:intron | 35.0% | |
CTGCTAGGAACTATTATAAC+AGG | - | chr3.4:87496738-87496757 | MS.gene013286:intron | 35.0% | |
CTTATTATGCTAGCAACACA+TGG | - | chr3.4:87501471-87501490 | MS.gene013286:intron | 35.0% | |
CTTGAAAATCAATGCACGAT+TGG | - | chr3.4:87501943-87501962 | MS.gene013286:intron | 35.0% | |
GAAAAGGAGAACGTGATTAT+GGG | - | chr3.4:87500797-87500816 | MS.gene013286:intron | 35.0% | |
GAGAAGTTAAACAGTGTAGT+GGG | - | chr3.4:87499525-87499544 | MS.gene013286:CDS | 35.0% | |
GCAATTGAAAATTTGGACCA+TGG | - | chr3.4:87500300-87500319 | MS.gene013286:intron | 35.0% | |
GGCAGAAGCAATTGAAAATT+TGG | - | chr3.4:87500293-87500312 | MS.gene013286:intron | 35.0% | |
GTACTTATGTCAGAAGAGAT+AGG | + | chr3.4:87501315-87501334 | None:intergenic | 35.0% | |
GTGAAACTGAGAAAACTTTG+TGG | + | chr3.4:87497523-87497542 | None:intergenic | 35.0% | |
GTGAAATAAAGCAGAGAGTA+AGG | + | chr3.4:87496801-87496820 | None:intergenic | 35.0% | |
GTGTAAGAGAGATACAGTTA+GGG | + | chr3.4:87500637-87500656 | None:intergenic | 35.0% | |
GTTAAGGTGGAAACAAGAAA+AGG | + | chr3.4:87496774-87496793 | None:intergenic | 35.0% | |
GTTGCATCAGTATGTATATG+TGG | - | chr3.4:87497676-87497695 | MS.gene013286:intron | 35.0% | |
GTTGCCCATTAGAATTACAT+GGG | - | chr3.4:87499035-87499054 | MS.gene013286:intron | 35.0% | |
TAAGAACATCCAGAATGCAA+CGG | + | chr3.4:87501113-87501132 | None:intergenic | 35.0% | |
TAATGATGGTAGGAAGTAAG+AGG | + | chr3.4:87497257-87497276 | None:intergenic | 35.0% | |
TAGTGGGAGTCAGTTATATA+GGG | - | chr3.4:87499541-87499560 | MS.gene013286:intron | 35.0% | |
TCAAGATGTGAAACTCCATA+AGG | + | chr3.4:87497988-87498007 | None:intergenic | 35.0% | |
TCAATCTCAATATCACCATC+AGG | + | chr3.4:87500366-87500385 | None:intergenic | 35.0% | |
TCAGTATGTATATGTGGCAA+AGG | - | chr3.4:87497682-87497701 | MS.gene013286:intron | 35.0% | |
TCTCTTCTGACATAAGTACA+TGG | - | chr3.4:87501316-87501335 | MS.gene013286:intron | 35.0% | |
TGTAAGAGAGATACAGTTAG+GGG | + | chr3.4:87500636-87500655 | None:intergenic | 35.0% | |
TGTGTAAGAGAGATACAGTT+AGG | + | chr3.4:87500638-87500657 | None:intergenic | 35.0% | |
TTGGGGATTTCAACCTTTAA+TGG | - | chr3.4:87497647-87497666 | MS.gene013286:intron | 35.0% | |
TTTCCAGAAAAGAGATATCC+AGG | - | chr3.4:87497620-87497639 | MS.gene013286:intron | 35.0% | |
! | AAAGAGATATCCAGGTCTTT+TGG | - | chr3.4:87497628-87497647 | MS.gene013286:intron | 35.0% |
! | AACATTGTGTTCTAAACCAG+TGG | - | chr3.4:87500271-87500290 | MS.gene013286:intron | 35.0% |
! | AAGAGATATCCAGGTCTTTT+GGG | - | chr3.4:87497629-87497648 | MS.gene013286:intron | 35.0% |
! | ACATTGTGTTCTAAACCAGT+GGG | - | chr3.4:87500272-87500291 | MS.gene013286:intron | 35.0% |
! | CGGTTTATATCTTTTAAGCG+CGG | - | chr3.4:87496903-87496922 | MS.gene013286:CDS | 35.0% |
! | CTCTAAAAGTGAAGATTGCA+TGG | - | chr3.4:87497928-87497947 | MS.gene013286:intron | 35.0% |
! | CTTCTTTTTGTGGCAGTTAT+CGG | - | chr3.4:87500697-87500716 | MS.gene013286:intron | 35.0% |
! | GATTGACGAAAAATTTTGGG+AGG | - | chr3.4:87500380-87500399 | MS.gene013286:intron | 35.0% |
! | GCAACAGTTTGTTCAAATTG+GGG | + | chr3.4:87502042-87502061 | None:intergenic | 35.0% |
! | GTGATGCTTTTCTTGTACTA+GGG | - | chr3.4:87501640-87501659 | MS.gene013286:CDS | 35.0% |
! | TGGATACCTATCGACATTTT+GGG | + | chr3.4:87498899-87498918 | None:intergenic | 35.0% |
! | TGTCGGTTATTTGTATTGAG+TGG | - | chr3.4:87500484-87500503 | MS.gene013286:intron | 35.0% |
! | TGTGATGCTTTTCTTGTACT+AGG | - | chr3.4:87501639-87501658 | MS.gene013286:CDS | 35.0% |
!! | CTATTTTTCCTGTTTGGCTT+TGG | - | chr3.4:87501170-87501189 | MS.gene013286:intron | 35.0% |
!! | TGGCAACTATTTTTCCTGTT+TGG | - | chr3.4:87501164-87501183 | MS.gene013286:intron | 35.0% |
!! | TTTGATTTTGTGCACGGTAT+AGG | - | chr3.4:87497452-87497471 | MS.gene013286:intron | 35.0% |
!!! | CAATCGTGCATTGATTTTCA+AGG | + | chr3.4:87501945-87501964 | None:intergenic | 35.0% |
AAACGCAAATTGCTGACCTT+TGG | + | chr3.4:87499142-87499161 | None:intergenic | 40.0% | |
AACTTTGAGCTGTTGAACTC+AGG | + | chr3.4:87496860-87496879 | None:intergenic | 40.0% | |
AAGCTCAGACTAATGTCATG+AGG | - | chr3.4:87496991-87497010 | MS.gene013286:intron | 40.0% | |
AGAAGATCATATAGTGGCCA+AGG | - | chr3.4:87497710-87497729 | MS.gene013286:intron | 40.0% | |
AGATGCTTCCATTGCCATAT+CGG | + | chr3.4:87501613-87501632 | None:intergenic | 40.0% | |
AGCATAAACCCGTTGAATAC+TGG | + | chr3.4:87499438-87499457 | None:intergenic | 40.0% | |
AGCTCAGACTAATGTCATGA+GGG | - | chr3.4:87496992-87497011 | MS.gene013286:intron | 40.0% | |
AGCTTGAAGAAACAGACTAC+AGG | - | chr3.4:87501371-87501390 | MS.gene013286:CDS | 40.0% | |
AGGTGGAAACAAGAAAAGGA+AGG | + | chr3.4:87496770-87496789 | None:intergenic | 40.0% | |
AGTTGGAACTTAGCACCAAA+AGG | - | chr3.4:87496876-87496895 | MS.gene013286:CDS | 40.0% | |
ATCCGAACACTGTCACTAAA+GGG | + | chr3.4:87501725-87501744 | None:intergenic | 40.0% | |
ATGCTTGAACTAGACGGAAT+AGG | - | chr3.4:87499453-87499472 | MS.gene013286:CDS | 40.0% | |
ATTTATGGCAATGACGGTGA+AGG | - | chr3.4:87498579-87498598 | MS.gene013286:intron | 40.0% | |
CCAGAACTATAAGCACCATT+AGG | + | chr3.4:87498113-87498132 | None:intergenic | 40.0% | |
CCTAATGGTGCTTATAGTTC+TGG | - | chr3.4:87498110-87498129 | MS.gene013286:intron | 40.0% | |
GATCACATGCGTCTAATATG+TGG | - | chr3.4:87500078-87500097 | MS.gene013286:intron | 40.0% | |
GGAAAAATAGTTGCCAAGGA+AGG | + | chr3.4:87501160-87501179 | None:intergenic | 40.0% | |
GGGTTTATGCTTGAACTAGA+CGG | - | chr3.4:87499447-87499466 | MS.gene013286:CDS | 40.0% | |
GTATGGCTTGAAAAGTGATC+TGG | - | chr3.4:87501971-87501990 | MS.gene013286:intron | 40.0% | |
GTATGTATATGTGGCAAAGG+GGG | - | chr3.4:87497685-87497704 | MS.gene013286:intron | 40.0% | |
GTATTTGCAAGGAAACTGCT+AGG | - | chr3.4:87496723-87496742 | MS.gene013286:intron | 40.0% | |
GTTGAAGTCCCTTAATCCAA+AGG | - | chr3.4:87499123-87499142 | MS.gene013286:intron | 40.0% | |
TATGTATATGTGGCAAAGGG+GGG | - | chr3.4:87497686-87497705 | MS.gene013286:intron | 40.0% | |
TATTGTTCTCTGATGGAGCT+TGG | - | chr3.4:87499633-87499652 | MS.gene013286:intron | 40.0% | |
TGAAAACATTGATGTGCGCT+CGG | - | chr3.4:87501259-87501278 | MS.gene013286:intron | 40.0% | |
TGAGTTCAACAGCTCAAAGT+TGG | - | chr3.4:87496859-87496878 | MS.gene013286:intron | 40.0% | |
TGCAGTCCTTTGTATTTGCA+AGG | - | chr3.4:87496712-87496731 | MS.gene013286:intron | 40.0% | |
TGGTTACCCAAAATGTCGAT+AGG | - | chr3.4:87498890-87498909 | MS.gene013286:intron | 40.0% | |
TGTTCTCTTGAAGTATAGCG+CGG | - | chr3.4:87501068-87501087 | MS.gene013286:intron | 40.0% | |
TTGGATTAAGGGACTTCAAC+TGG | + | chr3.4:87499123-87499142 | None:intergenic | 40.0% | |
TTTATGGCAATGACGGTGAA+GGG | - | chr3.4:87498580-87498599 | MS.gene013286:intron | 40.0% | |
! | AGACCTGGATATCTCTTTTC+TGG | + | chr3.4:87497626-87497645 | None:intergenic | 40.0% |
! | AGAGATATCCAGGTCTTTTG+GGG | - | chr3.4:87497630-87497649 | MS.gene013286:intron | 40.0% |
! | AGGTTGACATCTTTGGTAGT+AGG | + | chr3.4:87497047-87497066 | None:intergenic | 40.0% |
! | CTGGATACCTATCGACATTT+TGG | + | chr3.4:87498900-87498919 | None:intergenic | 40.0% |
! | CTTCCAAATGGTTTGGACTT+CGG | - | chr3.4:87499873-87499892 | MS.gene013286:intron | 40.0% |
! | CTTCGGTGATAATGTTCCAA+AGG | - | chr3.4:87501581-87501600 | MS.gene013286:CDS | 40.0% |
! | GATATAAACCGTCCTCCTTT+TGG | + | chr3.4:87496894-87496913 | None:intergenic | 40.0% |
! | GTAGTGGGAGTCAGTTATAT+AGG | - | chr3.4:87499540-87499559 | MS.gene013286:intron | 40.0% |
! | GTTTGTTGGGATTATCCATG+AGG | - | chr3.4:87499490-87499509 | MS.gene013286:CDS | 40.0% |
! | TCACACTTTGTTTGCCATGT+AGG | - | chr3.4:87497539-87497558 | MS.gene013286:intron | 40.0% |
! | TGAGCTTTTCCATCGTTTAC+CGG | + | chr3.4:87496978-87496997 | None:intergenic | 40.0% |
! | TTCCAAATGGTTTGGACTTC+GGG | - | chr3.4:87499874-87499893 | MS.gene013286:intron | 40.0% |
! | TTGACATCTTTGGTAGTAGG+AGG | + | chr3.4:87497044-87497063 | None:intergenic | 40.0% |
!! | AGCTGGCCGAATTGATTTTA+TGG | - | chr3.4:87498870-87498889 | MS.gene013286:intron | 40.0% |
!! | ATTGCCAAGAGTACTTGACA+TGG | - | chr3.4:87502073-87502092 | MS.gene013286:intron | 40.0% |
!! | TGACGAAAAATTTTGGGAGG+AGG | - | chr3.4:87500383-87500402 | MS.gene013286:intron | 40.0% |
!! | TTGCCAAGAGTACTTGACAT+GGG | - | chr3.4:87502074-87502093 | MS.gene013286:intron | 40.0% |
AAAGCACAATGAGCAGCAGA+TGG | + | chr3.4:87498835-87498854 | None:intergenic | 45.0% | |
AACCCGTTGAATACTGGACT+AGG | + | chr3.4:87499432-87499451 | None:intergenic | 45.0% | |
AATCAATGCACGATTGGGTG+AGG | - | chr3.4:87501949-87501968 | MS.gene013286:intron | 45.0% | |
AATTCTTGGAGGGAGAGATC+AGG | - | chr3.4:87500862-87500881 | MS.gene013286:intron | 45.0% | |
ACCCGTTGAATACTGGACTA+GGG | + | chr3.4:87499431-87499450 | None:intergenic | 45.0% | |
ACTTAGCACCAAAAGGAGGA+CGG | - | chr3.4:87496883-87496902 | MS.gene013286:CDS | 45.0% | |
AGAAAGAGAGAGGAGGAGAA+GGG | + | chr3.4:87496539-87496558 | None:intergenic | 45.0% | |
AGACCGATCTCTCGAATTCT+TGG | - | chr3.4:87500848-87500867 | MS.gene013286:intron | 45.0% | |
AGAGTAAGGAAGGGTTAAGG+TGG | + | chr3.4:87496787-87496806 | None:intergenic | 45.0% | |
AGATCACAATCTGCGGTGAA+GGG | + | chr3.4:87497488-87497507 | None:intergenic | 45.0% | |
AGGCAGAACCTTCTATAGTC+AGG | + | chr3.4:87497237-87497256 | None:intergenic | 45.0% | |
ATCTGCTGCTCATTGTGCTT+TGG | - | chr3.4:87498834-87498853 | MS.gene013286:intron | 45.0% | |
ATGAGAGAAGTGGGCCAAAT+GGG | - | chr3.4:87499384-87499403 | MS.gene013286:intron | 45.0% | |
CAATCCTCTCTAGTTGCCAT+CGG | + | chr3.4:87497411-87497430 | None:intergenic | 45.0% | |
CAGAATGCAACGGAACAAAC+AGG | + | chr3.4:87501103-87501122 | None:intergenic | 45.0% | |
CAGAGAGTAAGGAAGGGTTA+AGG | + | chr3.4:87496790-87496809 | None:intergenic | 45.0% | |
CATCCGAACACTGTCACTAA+AGG | + | chr3.4:87501726-87501745 | None:intergenic | 45.0% | |
CCTCCAAGAATTCGAGAGAT+CGG | + | chr3.4:87500854-87500873 | None:intergenic | 45.0% | |
CGATCTCTCGAATTCTTGGA+GGG | - | chr3.4:87500852-87500871 | MS.gene013286:intron | 45.0% | |
CGATCTGACGATCAAAGTCA+TGG | - | chr3.4:87499238-87499257 | MS.gene013286:intron | 45.0% | |
CTGTTTGTTCCGTTGCATTC+TGG | - | chr3.4:87501101-87501120 | MS.gene013286:intron | 45.0% | |
CTTACGATGAGAGAGGAAGA+AGG | + | chr3.4:87496514-87496533 | None:intergenic | 45.0% | |
GAAGAGATAGGTCAGCATCA+AGG | + | chr3.4:87501303-87501322 | None:intergenic | 45.0% | |
GAAGCAAGATGACCTACATC+AGG | + | chr3.4:87500453-87500472 | None:intergenic | 45.0% | |
GACAAGTCGAAAAGCAGACA+TGG | + | chr3.4:87501679-87501698 | None:intergenic | 45.0% | |
GATCCCATGTCAAGTACTCT+TGG | + | chr3.4:87502080-87502099 | None:intergenic | 45.0% | |
GCTACTGCAATCGTCAATGT+AGG | - | chr3.4:87501893-87501912 | MS.gene013286:intron | 45.0% | |
GCTGGAATCAGTACAGAATG+TGG | - | chr3.4:87497207-87497226 | MS.gene013286:intron | 45.0% | |
GCTTGAAAAGTGATCTGGAC+TGG | - | chr3.4:87501976-87501995 | MS.gene013286:intron | 45.0% | |
GGAATAGGAAAGAGCAGAGT+GGG | - | chr3.4:87499468-87499487 | MS.gene013286:CDS | 45.0% | |
GGAATGAAACAAAGGCCTGA+TGG | - | chr3.4:87500348-87500367 | MS.gene013286:intron | 45.0% | |
GGCAACTAGAGAGGATTGAA+TGG | - | chr3.4:87497413-87497432 | MS.gene013286:intron | 45.0% | |
GGCAGAACCTTCTATAGTCA+GGG | + | chr3.4:87497236-87497255 | None:intergenic | 45.0% | |
GGTGTTCTCAAACCTGATGT+AGG | - | chr3.4:87500438-87500457 | MS.gene013286:CDS | 45.0% | |
GTGGTATCCCTGACTATAGA+AGG | - | chr3.4:87497226-87497245 | MS.gene013286:intron | 45.0% | |
GTGGTCTTTCAACTGGAAGT+TGG | - | chr3.4:87500097-87500116 | MS.gene013286:intron | 45.0% | |
GTTACGGGATTATCCTTCCT+TGG | - | chr3.4:87501144-87501163 | MS.gene013286:intron | 45.0% | |
GTTGAAATCCCCAAAAGACC+TGG | + | chr3.4:87497641-87497660 | None:intergenic | 45.0% | |
TAAACCGATGGCAACTAGAG+AGG | - | chr3.4:87497404-87497423 | MS.gene013286:intron | 45.0% | |
TACCCGAAGTCCAAACCATT+TGG | + | chr3.4:87499879-87499898 | None:intergenic | 45.0% | |
TAGTCTAGCCAAAGCCAAAC+AGG | + | chr3.4:87501181-87501200 | None:intergenic | 45.0% | |
TATAGGGACTGAAGCGATAG+AGG | - | chr3.4:87499557-87499576 | MS.gene013286:intron | 45.0% | |
TATGAGAGAAGTGGGCCAAA+TGG | - | chr3.4:87499383-87499402 | MS.gene013286:intron | 45.0% | |
TCCAAAGGAAAGAGCCGATA+TGG | - | chr3.4:87501596-87501615 | MS.gene013286:CDS | 45.0% | |
TCCAGTCAATACAAGGAGCT+TGG | + | chr3.4:87497187-87497206 | None:intergenic | 45.0% | |
TCGGATGAACGAGAGAGATT+TGG | - | chr3.4:87501739-87501758 | MS.gene013286:intron | 45.0% | |
TGAAACCATACGCATGCATG+AGG | - | chr3.4:87497744-87497763 | MS.gene013286:intron | 45.0% | |
TGAGAACACCATTGCACTTC+TGG | + | chr3.4:87500428-87500447 | None:intergenic | 45.0% | |
TGGAACTTAGCACCAAAAGG+AGG | - | chr3.4:87496879-87496898 | MS.gene013286:CDS | 45.0% | |
TGGACTTCGGGTAACAATAC+TGG | - | chr3.4:87499886-87499905 | MS.gene013286:intron | 45.0% | |
TGGATTGAGAAAGAGAGAGG+AGG | + | chr3.4:87496546-87496565 | None:intergenic | 45.0% | |
TTATGGCAATGACGGTGAAG+GGG | - | chr3.4:87498581-87498600 | MS.gene013286:intron | 45.0% | |
TTCCAGCTCCAGTCAATACA+AGG | + | chr3.4:87497194-87497213 | None:intergenic | 45.0% | |
TTGAGAGCAGAAGCTTTCAC+TGG | + | chr3.4:87499834-87499853 | None:intergenic | 45.0% | |
TTGGCCCACTTCTCTCATAT+GGG | + | chr3.4:87499382-87499401 | None:intergenic | 45.0% | |
TTTCAATTGCTTCTGCCCAC+TGG | + | chr3.4:87500290-87500309 | None:intergenic | 45.0% | |
TTTCAGACCAATAACCCACC+AGG | - | chr3.4:87498133-87498152 | MS.gene013286:CDS | 45.0% | |
TTTGGCCCACTTCTCTCATA+TGG | + | chr3.4:87499383-87499402 | None:intergenic | 45.0% | |
! | AAAGAGCAGAGTGGGTTTGT+TGG | - | chr3.4:87499476-87499495 | MS.gene013286:CDS | 45.0% |
! | AAGAGCAGAGTGGGTTTGTT+GGG | - | chr3.4:87499477-87499496 | MS.gene013286:CDS | 45.0% |
! | ACCAAGCTCCTTGTATTGAC+TGG | - | chr3.4:87497183-87497202 | MS.gene013286:intron | 45.0% |
! | ATTGGGCTAGAAGCTATGCT+GGG | - | chr3.4:87498785-87498804 | MS.gene013286:intron | 45.0% |
! | CAAAGCTTTTGTCTGACCCA+GGG | + | chr3.4:87500329-87500348 | None:intergenic | 45.0% |
! | GAGCTTTTCCATCGTTTACC+GGG | + | chr3.4:87496977-87496996 | None:intergenic | 45.0% |
! | TATCTTTTAAGCGCGGTGCA+AGG | - | chr3.4:87496910-87496929 | MS.gene013286:CDS | 45.0% |
! | TATTGGGCTAGAAGCTATGC+TGG | - | chr3.4:87498784-87498803 | MS.gene013286:intron | 45.0% |
! | TTTTCCATCGTTTACCGGGA+AGG | + | chr3.4:87496973-87496992 | None:intergenic | 45.0% |
!! | TGTCTGCTTTTCGACTTGTC+AGG | - | chr3.4:87501679-87501698 | MS.gene013286:CDS | 45.0% |
!!! | TTAATTAATTAATTGTTTTA+TGG | + | chr3.4:87496614-87496633 | None:intergenic | 5.0% |
AACACCATTGCACTTCTGGC+AGG | + | chr3.4:87500424-87500443 | None:intergenic | 50.0% | |
AAGGGGACTTACGATGAGAG+AGG | + | chr3.4:87496521-87496540 | None:intergenic | 50.0% | |
AATTTGGACCATGGAAGCCC+TGG | - | chr3.4:87500309-87500328 | MS.gene013286:intron | 50.0% | |
AGGACCCCATATGAGAGAAG+TGG | - | chr3.4:87499374-87499393 | MS.gene013286:intron | 50.0% | |
AGTCTAGTTGACCGTGCCTT+TGG | + | chr3.4:87498163-87498182 | None:intergenic | 50.0% | |
ATCGTTTACCGGGAAGGTTC+CGG | + | chr3.4:87496967-87496986 | None:intergenic | 50.0% | |
ATGCACGATTGGGTGAGGTA+TGG | - | chr3.4:87501954-87501973 | MS.gene013286:intron | 50.0% | |
ATGCATGAGGCAGCTATTGC+AGG | - | chr3.4:87497757-87497776 | MS.gene013286:intron | 50.0% | |
ATTTGGACCATGGAAGCCCT+GGG | - | chr3.4:87500310-87500329 | MS.gene013286:intron | 50.0% | |
CAGATCACAATCTGCGGTGA+AGG | + | chr3.4:87497489-87497508 | None:intergenic | 50.0% | |
CATTGCACTTCTGGCAGGTT+GGG | + | chr3.4:87500419-87500438 | None:intergenic | 50.0% | |
CCCCCTAGTCCAGTATTCAA+CGG | - | chr3.4:87499426-87499445 | MS.gene013286:intron | 50.0% | |
CCCCTAGTCCAGTATTCAAC+GGG | - | chr3.4:87499427-87499446 | MS.gene013286:intron | 50.0% | |
CCGATCTCTCGAATTCTTGG+AGG | - | chr3.4:87500851-87500870 | MS.gene013286:intron | 50.0% | |
CCTGGGTCAGACAAAAGCTT+TGG | - | chr3.4:87500327-87500346 | MS.gene013286:intron | 50.0% | |
CGGAATAGGAAAGAGCAGAG+TGG | - | chr3.4:87499467-87499486 | MS.gene013286:CDS | 50.0% | |
GAAAGAGAGAGGAGGAGAAG+GGG | + | chr3.4:87496538-87496557 | None:intergenic | 50.0% | |
GAAGTATAGCGCGGCTGAAT+GGG | - | chr3.4:87501077-87501096 | MS.gene013286:intron | 50.0% | |
GAGAAAGAGAGAGGAGGAGA+AGG | + | chr3.4:87496540-87496559 | None:intergenic | 50.0% | |
GGAAAGAGCCGATATGGCAA+TGG | - | chr3.4:87501602-87501621 | MS.gene013286:CDS | 50.0% | |
GGACCCCATATGAGAGAAGT+GGG | - | chr3.4:87499375-87499394 | MS.gene013286:intron | 50.0% | |
GGCCCTTTAGTGACAGTGTT+CGG | - | chr3.4:87501720-87501739 | MS.gene013286:intron | 50.0% | |
GGGGGCAGAAGATCATATAG+TGG | - | chr3.4:87497704-87497723 | MS.gene013286:intron | 50.0% | |
GTAGTAGGAGGATCTGCATC+AGG | + | chr3.4:87497032-87497051 | None:intergenic | 50.0% | |
TATGGCAATGACGGTGAAGG+GGG | - | chr3.4:87498582-87498601 | MS.gene013286:intron | 50.0% | |
TCTAGCCCAATATCTCCTCC+TGG | + | chr3.4:87498776-87498795 | None:intergenic | 50.0% | |
TGAAGTATAGCGCGGCTGAA+TGG | - | chr3.4:87501076-87501095 | MS.gene013286:intron | 50.0% | |
TGCATGAGGCAGCTATTGCA+GGG | - | chr3.4:87497758-87497777 | MS.gene013286:intron | 50.0% | |
TGCTGTTCTACCAGCCCATT+TGG | + | chr3.4:87499401-87499420 | None:intergenic | 50.0% | |
TGGCCCACTTCTCTCATATG+GGG | + | chr3.4:87499381-87499400 | None:intergenic | 50.0% | |
TTGGCAGCTTTCGAGAAAGC+TGG | - | chr3.4:87498853-87498872 | MS.gene013286:intron | 50.0% | |
! | CCAAAGCTTTTGTCTGACCC+AGG | + | chr3.4:87500330-87500349 | None:intergenic | 50.0% |
! | CCCGTTGAATACTGGACTAG+GGG | + | chr3.4:87499430-87499449 | None:intergenic | 50.0% |
! | CCGTTGAATACTGGACTAGG+GGG | + | chr3.4:87499429-87499448 | None:intergenic | 50.0% |
! | CGTTGAATACTGGACTAGGG+GGG | + | chr3.4:87499428-87499447 | None:intergenic | 50.0% |
! | TTTTCACAGGGCAGCTCATG+AGG | - | chr3.4:87501862-87501881 | MS.gene013286:intron | 50.0% |
!! | CTCCTTGTATTGACTGGAGC+TGG | - | chr3.4:87497189-87497208 | MS.gene013286:intron | 50.0% |
!! | GCCATATCGGCTCTTTCCTT+TGG | + | chr3.4:87501600-87501619 | None:intergenic | 50.0% |
AGCTGCCTCATGCATGCGTA+TGG | + | chr3.4:87497752-87497771 | None:intergenic | 55.0% | |
ATGAGCAGCAGATGGCTGTG+CGG | + | chr3.4:87498827-87498846 | None:intergenic | 55.0% | |
ATGGCAATGACGGTGAAGGG+GGG | - | chr3.4:87498583-87498602 | MS.gene013286:intron | 55.0% | |
ATGGGCAACTACCAGCTCGA+TGG | + | chr3.4:87499024-87499043 | None:intergenic | 55.0% | |
CATGAGGCAGCTATTGCAGG+GGG | - | chr3.4:87497760-87497779 | MS.gene013286:intron | 55.0% | |
CCATTGCACTTCTGGCAGGT+TGG | + | chr3.4:87500420-87500439 | None:intergenic | 55.0% | |
CCCAATATCTCCTCCTGGCT+CGG | + | chr3.4:87498771-87498790 | None:intergenic | 55.0% | |
CCGAGCCAGGAGGAGATATT+GGG | - | chr3.4:87498768-87498787 | MS.gene013286:intron | 55.0% | |
CTAGAAGCTATGCTGGGTGG+AGG | - | chr3.4:87498791-87498810 | MS.gene013286:intron | 55.0% | |
CTCTCTCACTCTCTGCCTCA+TGG | + | chr3.4:87499508-87499527 | None:intergenic | 55.0% | |
GCATGAGGCAGCTATTGCAG+GGG | - | chr3.4:87497759-87497778 | MS.gene013286:intron | 55.0% | |
GGAACCTTCCCGGTAAACGA+TGG | - | chr3.4:87496966-87496985 | MS.gene013286:CDS | 55.0% | |
TAACCCACCAGGTGAGCCAA+AGG | - | chr3.4:87498144-87498163 | MS.gene013286:CDS | 55.0% | |
TCATGTCGAATCTCTGCCCC+CGG | - | chr3.4:87496945-87496964 | MS.gene013286:CDS | 55.0% | |
TCGTTTACCGGGAAGGTTCC+GGG | + | chr3.4:87496966-87496985 | None:intergenic | 55.0% | |
TTACACAGCAGGGACGCTGA+TGG | + | chr3.4:87502102-87502121 | None:intergenic | 55.0% | |
TTCTTCGTTCAAGCCGAGCC+AGG | - | chr3.4:87498755-87498774 | MS.gene013286:intron | 55.0% | |
! | CCAACCTGCCAGAAGTGCAA+TGG | - | chr3.4:87500417-87500436 | MS.gene013286:intron | 55.0% |
!! | CTGATGGAGCTTGGCTCTGT+TGG | - | chr3.4:87499642-87499661 | MS.gene013286:intron | 55.0% |
!! | TGGCTCACCTGGTGGGTTAT+TGG | + | chr3.4:87498143-87498162 | None:intergenic | 55.0% |
CACCAGGTGAGCCAAAGGCA+CGG | - | chr3.4:87498149-87498168 | MS.gene013286:CDS | 60.0% | |
CGTTTACCGGGAAGGTTCCG+GGG | + | chr3.4:87496965-87496984 | None:intergenic | 60.0% | |
GAGAAGTGGGCCAAATGGGC+TGG | - | chr3.4:87499388-87499407 | MS.gene013286:intron | 60.0% | |
GCCGAGCCAGGAGGAGATAT+TGG | - | chr3.4:87498767-87498786 | MS.gene013286:intron | 60.0% | |
GGGCTAGAAGCTATGCTGGG+TGG | - | chr3.4:87498788-87498807 | MS.gene013286:intron | 60.0% | |
GTTTACCGGGAAGGTTCCGG+GGG | + | chr3.4:87496964-87496983 | None:intergenic | 60.0% | |
TGTCTGACCCAGGGCTTCCA+TGG | + | chr3.4:87500320-87500339 | None:intergenic | 60.0% | |
TTCAGGCTGCACCATCGAGC+TGG | - | chr3.4:87499010-87499029 | MS.gene013286:intron | 60.0% | |
TTCGTTCAAGCCGAGCCAGG+AGG | - | chr3.4:87498758-87498777 | MS.gene013286:intron | 60.0% | |
! | GCACTTCTGGCAGGTTGGGA+TGG | + | chr3.4:87500415-87500434 | None:intergenic | 60.0% |
! | GTGCCTTTGGCTCACCTGGT+GGG | + | chr3.4:87498150-87498169 | None:intergenic | 60.0% |
CACAGGGCAGCTCATGAGGC+TGG | - | chr3.4:87501866-87501885 | MS.gene013286:intron | 65.0% | |
! | CGTGCCTTTGGCTCACCTGG+TGG | + | chr3.4:87498151-87498170 | None:intergenic | 65.0% |
! | GACCGTGCCTTTGGCTCACC+TGG | + | chr3.4:87498154-87498173 | None:intergenic | 65.0% |
CTCTGCCCCCGGAACCTTCC+CGG | - | chr3.4:87496956-87496975 | MS.gene013286:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.4 | gene | 87496452 | 87502121 | 87496452 | ID=MS.gene013286 |
chr3.4 | mRNA | 87496452 | 87502121 | 87496452 | ID=MS.gene013286.t1;Parent=MS.gene013286 |
chr3.4 | exon | 87502088 | 87502121 | 87502088 | ID=MS.gene013286.t1.exon1;Parent=MS.gene013286.t1 |
chr3.4 | CDS | 87502088 | 87502121 | 87502088 | ID=cds.MS.gene013286.t1;Parent=MS.gene013286.t1 |
chr3.4 | exon | 87501483 | 87501726 | 87501483 | ID=MS.gene013286.t1.exon2;Parent=MS.gene013286.t1 |
chr3.4 | CDS | 87501483 | 87501726 | 87501483 | ID=cds.MS.gene013286.t1;Parent=MS.gene013286.t1 |
chr3.4 | exon | 87501326 | 87501391 | 87501326 | ID=MS.gene013286.t1.exon3;Parent=MS.gene013286.t1 |
chr3.4 | CDS | 87501326 | 87501391 | 87501326 | ID=cds.MS.gene013286.t1;Parent=MS.gene013286.t1 |
chr3.4 | exon | 87500419 | 87500464 | 87500419 | ID=MS.gene013286.t1.exon4;Parent=MS.gene013286.t1 |
chr3.4 | CDS | 87500419 | 87500464 | 87500419 | ID=cds.MS.gene013286.t1;Parent=MS.gene013286.t1 |
chr3.4 | exon | 87499662 | 87499822 | 87499662 | ID=MS.gene013286.t1.exon5;Parent=MS.gene013286.t1 |
chr3.4 | CDS | 87499662 | 87499822 | 87499662 | ID=cds.MS.gene013286.t1;Parent=MS.gene013286.t1 |
chr3.4 | exon | 87499429 | 87499558 | 87499429 | ID=MS.gene013286.t1.exon6;Parent=MS.gene013286.t1 |
chr3.4 | CDS | 87499429 | 87499558 | 87499429 | ID=cds.MS.gene013286.t1;Parent=MS.gene013286.t1 |
chr3.4 | exon | 87498118 | 87498282 | 87498118 | ID=MS.gene013286.t1.exon7;Parent=MS.gene013286.t1 |
chr3.4 | CDS | 87498118 | 87498282 | 87498118 | ID=cds.MS.gene013286.t1;Parent=MS.gene013286.t1 |
chr3.4 | exon | 87496873 | 87497000 | 87496873 | ID=MS.gene013286.t1.exon8;Parent=MS.gene013286.t1 |
chr3.4 | CDS | 87496873 | 87497000 | 87496873 | ID=cds.MS.gene013286.t1;Parent=MS.gene013286.t1 |
chr3.4 | exon | 87496603 | 87496702 | 87496603 | ID=MS.gene013286.t1.exon9;Parent=MS.gene013286.t1 |
chr3.4 | CDS | 87496603 | 87496702 | 87496603 | ID=cds.MS.gene013286.t1;Parent=MS.gene013286.t1 |
chr3.4 | exon | 87496452 | 87496502 | 87496452 | ID=MS.gene013286.t1.exon10;Parent=MS.gene013286.t1 |
chr3.4 | CDS | 87496452 | 87496502 | 87496452 | ID=cds.MS.gene013286.t1;Parent=MS.gene013286.t1 |
Gene Sequence |
Protein sequence |