AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene013323

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene013323.t1 MTR_3g096020 97.110 519 15 0 1 519 76 594 0.0 1053
MS.gene013323.t1 MTR_5g064620 61.197 451 166 5 69 511 62 511 0.0 568
MS.gene013323.t1 MTR_3g099480 60.667 450 167 4 69 511 91 537 0.0 568
MS.gene013323.t1 MTR_4g019210 48.230 452 218 7 72 517 186 627 4.40e-141 421
MS.gene013323.t1 MTR_5g081690 48.592 426 208 6 88 511 94 510 2.32e-138 410
MS.gene013323.t1 MTR_4g125460 46.759 432 217 6 86 514 60 481 4.72e-138 408
MS.gene013323.t1 MTR_4g125460 46.759 432 217 6 86 514 199 620 8.03e-136 407
MS.gene013323.t1 MTR_5g042200 47.826 414 181 8 117 515 88 481 1.09e-129 387
MS.gene013323.t1 MTR_4g082310 44.966 447 209 10 75 511 70 489 1.26e-125 377
MS.gene013323.t1 MTR_6g016015 46.437 407 204 7 109 510 110 507 4.56e-122 368
MS.gene013323.t1 MTR_2g059350 45.564 417 212 8 100 510 100 507 3.26e-119 361
MS.gene013323.t1 MTR_4g110030 44.811 424 216 8 104 520 106 518 2.31e-116 353
MS.gene013323.t1 MTR_3g115220 37.984 516 260 15 23 511 10 492 1.44e-100 314
MS.gene013323.t1 MTR_5g099010 40.162 493 256 13 36 518 46 509 1.71e-96 304
MS.gene013323.t1 MTR_4g100810 39.080 435 228 10 89 511 80 489 1.53e-91 290
MS.gene013323.t1 MTR_1g031590 35.363 509 266 16 42 511 62 546 5.43e-88 281
MS.gene013323.t1 MTR_4g084570 37.613 444 234 12 89 511 126 547 8.98e-87 278
MS.gene013323.t1 MTR_5g012770 41.918 365 198 6 89 450 96 449 4.33e-85 272
MS.gene013323.t1 MTR_3g005340 35.991 439 247 8 90 511 123 544 1.46e-84 273
MS.gene013323.t1 MTR_5g032100 33.080 526 281 11 32 511 1 501 1.10e-83 268
MS.gene013323.t1 MTR_3g026650 36.242 447 238 10 84 511 138 556 4.17e-82 266
MS.gene013323.t1 MTR_5g059260 37.444 446 235 11 103 520 139 568 8.98e-82 266
MS.gene013323.t1 MTR_3g100310 33.270 523 276 12 38 511 17 515 4.51e-80 259
MS.gene013323.t1 MTR_1g102030 37.389 452 237 14 87 516 60 487 5.52e-79 256
MS.gene013323.t1 MTR_3g086570 32.129 498 288 15 42 511 72 547 4.51e-78 255
MS.gene013323.t1 MTR_4g023030 35.616 438 245 10 88 511 202 616 1.08e-76 253
MS.gene013323.t1 MTR_3g026650 38.843 363 190 7 84 427 138 487 6.32e-72 237
MS.gene013323.t1 MTR_2g016470 31.866 477 259 12 84 511 155 614 7.76e-67 227
MS.gene013323.t1 MTR_4g132590 34.834 422 226 9 84 457 34 454 2.35e-64 217
MS.gene013323.t1 MTR_4g132590 34.834 422 226 9 84 457 133 553 1.47e-63 218
MS.gene013323.t1 MTR_1g101990 39.867 301 158 7 219 516 3 283 8.51e-58 195
MS.gene013323.t1 MTR_3g086570 31.233 365 219 10 42 379 72 431 5.29e-54 188
MS.gene013323.t1 MTR_4g010990 31.892 370 228 9 117 480 78 429 3.76e-53 186
MS.gene013323.t1 MTR_4g010990 31.006 358 223 9 129 480 1 340 8.15e-49 172
MS.gene013323.t1 MTR_3g026650 36.000 275 144 7 84 339 138 399 5.12e-44 160
MS.gene013323.t1 MTR_3g092590 32.727 330 190 8 86 390 60 382 4.99e-42 158
MS.gene013323.t1 MTR_3g092590 32.727 330 190 8 86 390 60 382 2.33e-41 157
MS.gene013323.t1 MTR_7g017330 28.535 389 231 9 37 390 14 390 4.77e-41 157
MS.gene013323.t1 MTR_7g064210 41.451 193 96 4 212 392 7 194 7.22e-39 147
MS.gene013323.t1 MTR_1g007390 34.926 272 147 6 142 390 124 388 1.58e-34 138
MS.gene013323.t1 MTR_1g101985 45.714 105 56 1 87 190 60 164 6.70e-25 102
MS.gene013323.t1 MTR_4g008200 27.072 362 198 13 89 430 12 327 4.38e-24 104
MS.gene013323.t1 MTR_4g008200 27.072 362 198 13 89 430 63 378 9.58e-24 103
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene013323.t1 AT5G64600 66.864 507 151 4 25 518 19 521 0.0 704
MS.gene013323.t1 AT1G22460 58.411 428 176 2 85 511 131 557 0.0 535
MS.gene013323.t1 AT2G37980 51.054 427 196 7 88 511 199 615 6.88e-140 418
MS.gene013323.t1 AT3G54100 49.765 426 203 6 88 511 195 611 4.62e-137 410
MS.gene013323.t1 AT5G35570 49.296 426 203 6 89 511 225 640 5.54e-136 408
MS.gene013323.t1 AT5G01100 43.452 504 260 9 24 513 118 610 1.24e-133 402
MS.gene013323.t1 AT3G02250 47.912 407 198 7 109 510 101 498 7.49e-126 377
MS.gene013323.t1 AT1G14020 47.420 407 191 7 118 515 95 487 2.20e-123 371
MS.gene013323.t1 AT2G03280 48.371 399 190 8 118 510 92 480 1.93e-121 365
MS.gene013323.t1 AT5G15740 46.247 413 196 8 109 510 101 498 2.09e-121 366
MS.gene013323.t1 AT2G03280 45.305 426 190 9 118 510 92 507 1.76e-115 351
MS.gene013323.t1 AT1G20550 40.553 434 232 9 84 511 76 489 3.13e-103 321
MS.gene013323.t1 AT1G76270 38.710 496 266 12 30 511 15 486 1.49e-102 320
MS.gene013323.t1 AT4G38390 39.545 440 230 10 84 511 90 505 8.20e-99 309
MS.gene013323.t1 AT5G63390 39.052 443 238 9 84 514 129 551 8.42e-97 304
MS.gene013323.t1 AT1G38065 39.614 414 217 8 117 511 29 428 8.27e-91 285
MS.gene013323.t1 AT1G38065 39.614 414 217 8 117 511 39 438 1.76e-90 285
MS.gene013323.t1 AT1G38131 39.614 414 217 8 117 511 158 557 3.99e-89 285
MS.gene013323.t1 AT1G04910 38.631 453 238 11 74 511 47 474 2.65e-87 278
MS.gene013323.t1 AT4G24530 36.966 468 225 12 88 511 75 516 2.56e-86 276
MS.gene013323.t1 AT4G16650 41.500 400 208 8 117 511 125 503 5.55e-86 276
MS.gene013323.t1 AT4G16650 41.500 400 208 8 117 511 125 503 5.55e-86 276
MS.gene013323.t1 AT1G35510 36.842 437 229 11 98 511 144 556 2.94e-84 272
MS.gene013323.t1 AT5G65470 34.690 467 245 7 85 511 56 502 1.52e-80 260
MS.gene013323.t1 AT1G14970 35.780 436 234 12 98 511 21 432 5.08e-80 257
MS.gene013323.t1 AT2G44500 35.440 443 252 8 90 519 148 569 6.48e-80 261
MS.gene013323.t1 AT1G14970 36.451 417 221 11 117 511 12 406 9.17e-80 255
MS.gene013323.t1 AT3G26370 33.551 459 255 13 81 511 119 555 5.50e-79 258
MS.gene013323.t1 AT1G14970 35.780 436 234 12 98 511 141 552 2.47e-78 256
MS.gene013323.t1 AT2G01480 37.143 420 223 11 117 516 157 555 1.46e-77 254
MS.gene013323.t1 AT2G01480 40.000 355 189 8 117 451 157 507 2.37e-77 253
MS.gene013323.t1 AT3G07900 34.216 453 248 9 85 515 152 576 4.00e-76 251
MS.gene013323.t1 AT1G29200 33.264 481 253 11 78 511 34 493 9.99e-71 234
MS.gene013323.t1 AT1G29200 33.264 481 253 11 78 511 34 493 9.99e-71 234
MS.gene013323.t1 AT1G29200 33.264 481 253 11 78 511 150 609 2.06e-69 234
MS.gene013323.t1 AT1G29200 34.713 435 224 9 120 511 2 419 3.08e-69 228
MS.gene013323.t1 AT1G62330 34.048 420 227 9 87 457 193 611 1.19e-67 230
MS.gene013323.t1 AT1G11990 37.000 400 216 8 85 457 160 550 1.21e-67 228
MS.gene013323.t1 AT1G11990 33.867 437 216 9 85 457 145 572 3.75e-61 212
MS.gene013323.t1 AT1G52630 29.748 437 271 13 49 474 9 420 4.92e-53 186
MS.gene013323.t1 AT1G52630 30.460 348 224 8 129 474 1 332 6.18e-47 167
MS.gene013323.t1 AT3G30300 32.537 335 193 9 87 400 81 403 1.28e-45 170
MS.gene013323.t1 AT3G30300 32.537 335 193 9 87 400 81 403 1.28e-45 170
MS.gene013323.t1 AT3G03810 34.416 308 170 7 104 390 85 381 1.44e-45 169
MS.gene013323.t1 AT3G03810 34.416 308 170 7 104 390 85 381 1.44e-45 169
MS.gene013323.t1 AT2G44500 37.262 263 146 6 90 339 148 404 2.68e-43 159
MS.gene013323.t1 AT3G26370 32.830 265 157 7 81 325 119 382 3.73e-36 139

Find 128 sgRNAs with CRISPR-Local

Find 405 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATCCTGATATCTCCTTTC+AGG 0.161418 3.4:+87055605 None:intergenic
CTAGGGAGACTACAAATTAT+TGG 0.236304 3.4:-87053744 MS.gene013323:intron
TTAAAGGCCGGGCACGTTTC+AGG 0.238885 3.4:-87051335 MS.gene013323:CDS
TCCATCTTATTCGGGAAATA+TGG 0.262866 3.4:-87053314 MS.gene013323:CDS
GGTTCATTACCGGGAGTTAA+AGG 0.281748 3.4:-87051351 MS.gene013323:CDS
TGTGTTTGTTCCATCTTATT+CGG 0.290733 3.4:-87053323 MS.gene013323:CDS
TCCTTGAACCTAGGTGGTTT+TGG 0.298234 3.4:+87056646 None:intergenic
CGCACCTTAGTGATTAGATT+AGG 0.299716 3.4:+87053544 None:intergenic
TATCTTTCTCATATCTTAGA+TGG 0.303742 3.4:+87053941 None:intergenic
AGGGGTAGCTTCCAAGTTCT+TGG 0.323124 3.4:+87055570 None:intergenic
CAAGGACGACGAACAGCTTT+GGG 0.331047 3.4:-87056629 MS.gene013323:CDS
GTGTTTGTTCCATCTTATTC+GGG 0.362023 3.4:-87053322 MS.gene013323:CDS
TCTTGAATTCAGTACCTGTC+TGG 0.362228 3.4:+87053238 None:intergenic
TCTCCTCCTATTGAGAATCT+AGG 0.363779 3.4:-87054616 MS.gene013323:CDS
TGTTGAAATATTTGATAAGC+TGG 0.365646 3.4:-87051747 MS.gene013323:CDS
AAGCCAACTGCGAAATATAA+AGG 0.375496 3.4:-87056571 MS.gene013323:intron
TCAAGGACGACGAACAGCTT+TGG 0.383067 3.4:-87056630 MS.gene013323:CDS
TCCCCTGCAGCAATGTATAT+TGG 0.386385 3.4:+87053613 None:intergenic
CTAGGAAACACTTTACTTCC+TGG 0.386484 3.4:-87055543 MS.gene013323:CDS
CAAGTATATCAGAGGTTTCA+TGG 0.388494 3.4:-87057154 MS.gene013323:CDS
GGAGAAAGCGAAGACGAAAA+TGG 0.395470 3.4:+87057083 None:intergenic
GCACCTTAGTGATTAGATTA+GGG 0.404143 3.4:+87053545 None:intergenic
AACTCAACAGAACAGAGAAT+TGG 0.406142 3.4:-87053706 MS.gene013323:CDS
TGCAAGTCGAGAATCTGATT+TGG 0.409162 3.4:+87054705 None:intergenic
GCAATGTATATTGGTGTTGA+TGG 0.409986 3.4:+87053622 None:intergenic
AGGAGATATCAGGATTGTTC+AGG 0.410316 3.4:-87055599 MS.gene013323:CDS
AATCCCTGAAAGGAGATATC+AGG 0.410894 3.4:-87055609 MS.gene013323:CDS
GAAAAGACAAGGTTCATTAC+CGG 0.425374 3.4:-87051361 MS.gene013323:CDS
AAACACTTTACTTCCTGGTC+TGG 0.428402 3.4:-87055538 MS.gene013323:CDS
ATTGCTGCAGGGGAGATCTA+TGG 0.431940 3.4:-87053604 MS.gene013323:CDS
ATGAAGAGATGACAAGGTTA+TGG 0.432678 3.4:-87055504 MS.gene013323:CDS
AATCCTGATATCTCCTTTCA+GGG 0.432917 3.4:+87055606 None:intergenic
CTTGAATTCAGTACCTGTCT+GGG 0.438349 3.4:+87053239 None:intergenic
ATCTTCTTCATCGGTGATGA+AGG 0.453536 3.4:+87057032 None:intergenic
GGGGTAGCTTCCAAGTTCTT+GGG 0.454429 3.4:+87055571 None:intergenic
TCAGGAACTTCCCAAGAACT+TGG 0.459041 3.4:-87055581 MS.gene013323:CDS
ACCTTTCCTAGATTCTCAAT+AGG 0.461910 3.4:+87054610 None:intergenic
CCACATATACACTCTGGGTA+TGG 0.462244 3.4:+87051288 None:intergenic
AGTTGGATAAACGTTCATTC+TGG 0.469363 3.4:-87055778 MS.gene013323:CDS
TGCAGCGGATGCACAAGAAC+AGG 0.470811 3.4:-87051682 MS.gene013323:intron
CATGAAACCTCTGATATACT+TGG 0.476512 3.4:+87057155 None:intergenic
GAAACTAGAGAGCTAGTAGA+AGG 0.480162 3.4:-87051725 MS.gene013323:CDS
TGGGTTTCTCCCAACAGTCA+TGG 0.483040 3.4:-87056610 MS.gene013323:CDS
GAACCTTTATATTTCGCAGT+TGG 0.483272 3.4:+87056568 None:intergenic
TGGAAGCTACCCCTCGGGCT+AGG 0.487402 3.4:-87055561 MS.gene013323:CDS
GGGTGGAATCCATGACTGTT+GGG 0.492340 3.4:+87056601 None:intergenic
TCGCACGGCATCTCAACCTC+TGG 0.494972 3.4:+87054659 None:intergenic
GCCATATTTCCCGAATAAGA+TGG 0.495629 3.4:+87053313 None:intergenic
TAGTGATTAGATTAGGGAAG+CGG 0.502454 3.4:+87053551 None:intergenic
AGGAGCGGCACTGTCACATA+TGG 0.504218 3.4:-87051705 MS.gene013323:CDS
GCCAAAACCACCTAGGTTCA+AGG 0.504668 3.4:-87056647 MS.gene013323:CDS
TATCTGTCTGTTAGAAGTAA+TGG 0.505198 3.4:-87056333 MS.gene013323:CDS
ACACCAATATACATTGCTGC+AGG 0.507428 3.4:-87053616 MS.gene013323:CDS
AAATATGGCACGAGCTGTTG+AGG 0.514010 3.4:-87053299 MS.gene013323:CDS
GTATAGAAAGTGATGATACT+TGG 0.514236 3.4:+87057105 None:intergenic
AGGGTGGAATCCATGACTGT+TGG 0.519259 3.4:+87056600 None:intergenic
TTTACTTCCTGGTCTGGAGT+TGG 0.519449 3.4:-87055532 MS.gene013323:CDS
AACTTTAGTCATCCCTCAGT+TGG 0.520544 3.4:-87055795 MS.gene013323:CDS
CATTACCGGGAGTTAAAGGC+CGG 0.520676 3.4:-87051347 MS.gene013323:CDS
AAGGTTATGGAATGACTATC+AGG 0.520706 3.4:-87055491 MS.gene013323:intron
CTCGAACCACATATACACTC+TGG 0.524483 3.4:+87051282 None:intergenic
TTCGCAGTTGGCTTGACACA+AGG 0.526799 3.4:+87056580 None:intergenic
CAATGTATATTGGTGTTGAT+GGG 0.528672 3.4:+87053623 None:intergenic
CAGACAGATAGCGATCAAAT+CGG 0.529121 3.4:+87056346 None:intergenic
GATAGCAGACATGGTGGCTG+TGG 0.532256 3.4:-87055834 MS.gene013323:CDS
CATTTCATTGAATCCCTGAA+AGG 0.535856 3.4:-87055619 MS.gene013323:CDS
CTTCCCTAATCTAATCACTA+AGG 0.540435 3.4:-87053548 MS.gene013323:intron
TGTTCGTCGTCCTTGAACCT+AGG 0.540838 3.4:+87056637 None:intergenic
TTTCCTAGATTCTCAATAGG+AGG 0.544413 3.4:+87054613 None:intergenic
AGTGATTAGATTAGGGAAGC+GGG 0.545854 3.4:+87053552 None:intergenic
TCAACAGAACAGAGAATTGG+AGG 0.549031 3.4:-87053703 MS.gene013323:CDS
CCATACCCAGAGTGTATATG+TGG 0.553938 3.4:-87051288 MS.gene013323:CDS
GGACTCAATCAAATGCGAAC+TGG 0.559103 3.4:-87056309 MS.gene013323:CDS
AGCATCAATTGATGCAGACA+CGG 0.559818 3.4:-87057215 None:intergenic
AATATGGCACGAGCTGTTGA+GGG 0.566760 3.4:-87053298 MS.gene013323:CDS
CTTCAGTCCTGAAACGTGCC+CGG 0.566876 3.4:+87051328 None:intergenic
ATGTGGTTGATCTTCTTCAT+CGG 0.569645 3.4:+87057023 None:intergenic
GAACTTGGAAGCTACCCCTC+GGG 0.571008 3.4:-87055566 MS.gene013323:CDS
TCCTATTGAGAATCTAGGAA+AGG 0.572772 3.4:-87054611 MS.gene013323:intron
CGTGCCCGGCCTTTAACTCC+CGG 0.579592 3.4:+87051342 None:intergenic
GCAAAACAATCAACCCAGAC+AGG 0.579809 3.4:-87053252 MS.gene013323:intron
GTATAACAAGAAGATGAAGA+TGG 0.581154 3.4:+87057062 None:intergenic
CCACTGACTCCAAAGGAGGT+TGG 0.582301 3.4:-87053673 MS.gene013323:CDS
CCAACCTCCTTTGGAGTCAG+TGG 0.583020 3.4:+87053673 None:intergenic
TCGAACCACATATACACTCT+GGG 0.583300 3.4:+87051283 None:intergenic
TCGCAGTTGGCTTGACACAA+GGG 0.584555 3.4:+87056581 None:intergenic
ATAATAACCAACTCCAGACC+AGG 0.585969 3.4:+87055525 None:intergenic
CAGAGTGTATATGTGGTTCG+AGG 0.597139 3.4:-87051281 MS.gene013323:CDS
ACCAATATACATTGCTGCAG+GGG 0.597633 3.4:-87053614 MS.gene013323:CDS
CACTGTCACATATGGTGCAG+CGG 0.599011 3.4:-87051697 MS.gene013323:CDS
CACCAATATACATTGCTGCA+GGG 0.603313 3.4:-87053615 MS.gene013323:CDS
GTGGATCGGCTGAGATCACG+CGG 0.604951 3.4:-87053982 MS.gene013323:CDS
GCATCAATTGATGCAGACAC+GGG 0.605346 3.4:-87057214 None:intergenic
AGAACTTGGAAGCTACCCCT+CGG 0.606450 3.4:-87055567 MS.gene013323:CDS
TTGTCCACTGACTCCAAAGG+AGG 0.608146 3.4:-87053677 MS.gene013323:CDS
CTCAACCTCTGGATGTCTAG+AGG 0.609590 3.4:+87054670 None:intergenic
GATCGAGAAATGTGAGGATG+TGG 0.611720 3.4:+87057006 None:intergenic
TGCGGTGATCTAAGAACCTG+CGG 0.611919 3.4:+87053272 None:intergenic
AAAGAATCCAAGTATATCAG+AGG 0.614977 3.4:-87057162 MS.gene013323:CDS
TTTGCTATAGATAGCAGACA+TGG 0.622788 3.4:-87055843 MS.gene013323:intron
CTGTCTGTTAGAAGTAATGG+TGG 0.622811 3.4:-87056330 MS.gene013323:CDS
ATCTTCCTCTAGACATCCAG+AGG 0.623275 3.4:-87054675 MS.gene013323:CDS
TCGTCGTCCTTGAACCTAGG+TGG 0.625327 3.4:+87056640 None:intergenic
GTAAAGTGTTTCCTAGCCCG+AGG 0.626364 3.4:+87055550 None:intergenic
TGTGCAGGCAAGGTGCTCCA+AGG 0.626420 3.4:-87051383 MS.gene013323:intron
TAGAGAGCTAGTAGAAGGAG+CGG 0.626541 3.4:-87051720 MS.gene013323:CDS
AAAAGACAAGGTTCATTACC+GGG 0.630141 3.4:-87051360 MS.gene013323:CDS
ATTACCGGGAGTTAAAGGCC+GGG 0.630249 3.4:-87051346 MS.gene013323:CDS
TAAAGTGTTTCCTAGCCCGA+GGG 0.634145 3.4:+87055551 None:intergenic
GTTATTATGAAGAGATGACA+AGG 0.641670 3.4:-87055510 MS.gene013323:CDS
CAGTTGGCTTGACACAAGGG+TGG 0.643605 3.4:+87056584 None:intergenic
ATGTATATTGGTGTTGATGG+GGG 0.648159 3.4:+87053625 None:intergenic
ATGAACGTTTATCCAACTGA+GGG 0.655038 3.4:+87055783 None:intergenic
GAGCTGTTGAGGGACACCGC+AGG 0.657911 3.4:-87053288 MS.gene013323:CDS
GTTCATTCTGGCAAGACTCG+AGG 0.662603 3.4:-87055766 MS.gene013323:intron
GGATCGGCTGAGATCACGCG+GGG 0.665272 3.4:-87053980 MS.gene013323:CDS
AATGTATATTGGTGTTGATG+GGG 0.666505 3.4:+87053624 None:intergenic
ACAGATAGCGATCAAATCGG+TGG 0.680810 3.4:+87056349 None:intergenic
GCTGCAGGGGAGATCTATGG+TGG 0.681999 3.4:-87053601 MS.gene013323:CDS
AATGAACGTTTATCCAACTG+AGG 0.684564 3.4:+87055782 None:intergenic
GAAGTGCATGATACATCGCA+CGG 0.684874 3.4:+87054644 None:intergenic
TACAGGTGCCAAAACCACCT+AGG 0.685481 3.4:-87056654 MS.gene013323:intron
TCGTGAGATCGAGAAATGTG+AGG 0.691675 3.4:+87057000 None:intergenic
GCTATAGATAGCAGACATGG+TGG 0.694526 3.4:-87055840 MS.gene013323:intron
GGTGCTCCAAGGAAAAGACA+AGG 0.712875 3.4:-87051372 MS.gene013323:CDS
TCACATTTCTCGATCTCACG+AGG 0.715778 3.4:-87056998 MS.gene013323:intron
TGGATCGGCTGAGATCACGC+GGG 0.720710 3.4:-87053981 MS.gene013323:CDS
AAAGTGTTTCCTAGCCCGAG+GGG 0.767233 3.4:+87055552 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+GGG + chr3.4:87056531-87056512 None:intergenic 0.0%
!! TATATATATATATATATATA+TGG + chr3.4:87056532-87056513 None:intergenic 0.0%
!! AAAATAATAATTGCTAAATT+TGG - chr3.4:87055530-87055549 MS.gene013323:CDS 10.0%
!! AAATAATAATTGCTAAATTT+GGG - chr3.4:87055531-87055550 MS.gene013323:CDS 10.0%
!!! ATCGATTTTTTATTTTTTTA+AGG + chr3.4:87055812-87055831 None:intergenic 10.0%
!!! GAAAAAAATAAATACATTTT+GGG + chr3.4:87055357-87055376 None:intergenic 10.0%
!! AAATATTTGTCATATGAATA+TGG - chr3.4:87053259-87053278 MS.gene013323:CDS 15.0%
!! AATAATCGATGATTAAAAAA+GGG - chr3.4:87055400-87055419 MS.gene013323:intron 15.0%
!! AATGAAGATAAAATTAGAAA+AGG + chr3.4:87052780-87052799 None:intergenic 15.0%
!! TATATAATTAGAACAAAAGT+TGG + chr3.4:87052568-87052587 None:intergenic 15.0%
!!! AAAAAATGTTTTGATTTTTC+AGG - chr3.4:87053724-87053743 MS.gene013323:CDS 15.0%
!!! ATTTTAAATGAAGCAATTTA+GGG - chr3.4:87054059-87054078 MS.gene013323:intron 15.0%
!!! CTAATTTTATCTTCATTATT+GGG - chr3.4:87052783-87052802 MS.gene013323:intron 15.0%
!!! GGAAAAAAATAAATACATTT+TGG + chr3.4:87055358-87055377 None:intergenic 15.0%
!!! GTGATATTTGTAATTTTTAA+GGG + chr3.4:87055682-87055701 None:intergenic 15.0%
!!! TAATGTTAAATCATGTTTTT+GGG - chr3.4:87056818-87056837 MS.gene013323:intron 15.0%
!!! TCTAATTTTATCTTCATTAT+TGG - chr3.4:87052782-87052801 MS.gene013323:intron 15.0%
!!! TTAATGTTAAATCATGTTTT+TGG - chr3.4:87056817-87056836 MS.gene013323:intron 15.0%
!! AAAAAATGTGAGAATTGAAT+CGG + chr3.4:87053999-87054018 None:intergenic 20.0%
!! AAATTGTTTCCCTTAAAAAT+AGG - chr3.4:87055670-87055689 MS.gene013323:intron 20.0%
!! ACATACGATTAAGAAAATTA+TGG + chr3.4:87057064-87057083 None:intergenic 20.0%
!! ATTTATCAATCAACTTAATC+AGG + chr3.4:87055021-87055040 None:intergenic 20.0%
!! CAATAATCGATGATTAAAAA+AGG - chr3.4:87055399-87055418 MS.gene013323:intron 20.0%
!! CACTCTTTAAATACTTTAAA+TGG - chr3.4:87055447-87055466 MS.gene013323:intron 20.0%
!! GATAAAATTAGAAAAGGTTA+AGG + chr3.4:87052774-87052793 None:intergenic 20.0%
!! GTTTATATACTAATACTATG+CGG + chr3.4:87055961-87055980 None:intergenic 20.0%
!! TAATTACTCTTAATTAGCAT+AGG + chr3.4:87051540-87051559 None:intergenic 20.0%
!! TCATCAAATCATTCATAATA+TGG + chr3.4:87056883-87056902 None:intergenic 20.0%
!! TTAAAAAAAGGATCAAACTT+AGG - chr3.4:87055595-87055614 MS.gene013323:CDS 20.0%
!!! AAAAATCAAATCTTTGAGAA+CGG + chr3.4:87053656-87053675 None:intergenic 20.0%
!!! AACGAATGTTTTAATTTAAG+AGG - chr3.4:87054228-87054247 MS.gene013323:intron 20.0%
!!! AAGTTTGATCCTTTTTTTAA+GGG + chr3.4:87055595-87055614 None:intergenic 20.0%
!!! ATTTACAGACTTTCTTTTAA+TGG + chr3.4:87052000-87052019 None:intergenic 20.0%
!!! ATTTTTAAGGGAAACAATTT+TGG + chr3.4:87055670-87055689 None:intergenic 20.0%
!!! CATTTTAAATGAAGCAATTT+AGG - chr3.4:87054058-87054077 MS.gene013323:intron 20.0%
!!! CTTTTCTTAAAAAAAATCAG+TGG + chr3.4:87054685-87054704 None:intergenic 20.0%
!!! GATATTTCTATGACATATAT+AGG + chr3.4:87053910-87053929 None:intergenic 20.0%
!!! GGTGATATTTGTAATTTTTA+AGG + chr3.4:87055683-87055702 None:intergenic 20.0%
!!! TAAGTTTGATCCTTTTTTTA+AGG + chr3.4:87055596-87055615 None:intergenic 20.0%
!!! TATAGTTGTAGAATTTTCTT+GGG - chr3.4:87055252-87055271 MS.gene013323:intron 20.0%
!!! TTATAGTTGTAGAATTTTCT+TGG - chr3.4:87055251-87055270 MS.gene013323:intron 20.0%
!!! TTTGTATTCCTTTTATTTTC+AGG - chr3.4:87056686-87056705 MS.gene013323:intron 20.0%
!!! TTTTTAAAGATGTCCATTTT+AGG - chr3.4:87053553-87053572 MS.gene013323:CDS 20.0%
! AAAACATTCGTTCAATGATA+TGG + chr3.4:87054220-87054239 None:intergenic 25.0%
! AAAATAGGAGAAAGTTGTTT+AGG - chr3.4:87055719-87055738 MS.gene013323:intron 25.0%
! AAAGACAGAATCAAAAGAAA+CGG + chr3.4:87055334-87055353 None:intergenic 25.0%
! AACAAATAGAGAAAAAAAGC+CGG - chr3.4:87056197-87056216 MS.gene013323:intron 25.0%
! AGGATTTCCAGTTATTATTT+AGG + chr3.4:87054144-87054163 None:intergenic 25.0%
! ATATTACCAAGTTTACTTGA+TGG + chr3.4:87053312-87053331 None:intergenic 25.0%
! ATATTGTGTGGCAAAATATA+TGG - chr3.4:87053356-87053375 MS.gene013323:CDS 25.0%
! CAAATTTCTTGTATCGAAAT+AGG - chr3.4:87052292-87052311 MS.gene013323:intron 25.0%
! CAATTACACTTTCAAAACTT+TGG - chr3.4:87052236-87052255 MS.gene013323:intron 25.0%
! CCATTATCAAAACTGTTAAA+TGG + chr3.4:87051656-87051675 None:intergenic 25.0%
! GAAAGATATTACAGATTCAA+AGG + chr3.4:87056966-87056985 None:intergenic 25.0%
! GCATAGATATTTCAAATACA+TGG + chr3.4:87054653-87054672 None:intergenic 25.0%
! GTTATTATTTAGGCACAAAA+TGG + chr3.4:87054134-87054153 None:intergenic 25.0%
! GTTGATTGATAAATGTTAAC+AGG - chr3.4:87055027-87055046 MS.gene013323:intron 25.0%
! TATCTTTCTCATATCTTAGA+TGG + chr3.4:87054526-87054545 None:intergenic 25.0%
! TATGTCGTGGAAAAAAATAA+GGG + chr3.4:87055983-87056002 None:intergenic 25.0%
! TATTACCAAGTTTACTTGAT+GGG + chr3.4:87053311-87053330 None:intergenic 25.0%
! TGTTGAAATATTTGATAAGC+TGG - chr3.4:87056717-87056736 MS.gene013323:intron 25.0%
! TTAACAAGACCCTTAAAAAA+AGG - chr3.4:87055583-87055602 MS.gene013323:CDS 25.0%
! TTAGTAACTGATAAAATGCT+GGG - chr3.4:87053951-87053970 MS.gene013323:CDS 25.0%
! TTATGTCGTGGAAAAAAATA+AGG + chr3.4:87055984-87056003 None:intergenic 25.0%
! TTCAATAGCTCATAATCTTT+GGG - chr3.4:87054979-87054998 MS.gene013323:intron 25.0%
! TTGAAGAATTAAAACTGTCA+AGG + chr3.4:87056651-87056670 None:intergenic 25.0%
! TTGGATCTCTAACAAAAAAT+TGG + chr3.4:87051515-87051534 None:intergenic 25.0%
! TTGTCATATGAATATGGAAT+AGG - chr3.4:87053265-87053284 MS.gene013323:CDS 25.0%
! TTTAGTAACTGATAAAATGC+TGG - chr3.4:87053950-87053969 MS.gene013323:CDS 25.0%
!! AAGTTTGTTTCAATTCTTCT+AGG - chr3.4:87054702-87054721 MS.gene013323:CDS 25.0%
!! AATGATTAACACTTTTGTGT+TGG + chr3.4:87056014-87056033 None:intergenic 25.0%
!! AATTTAAGAGGATTTTCTTG+AGG - chr3.4:87054240-87054259 MS.gene013323:intron 25.0%
!! AGTTTGTTTCAATTCTTCTA+GGG - chr3.4:87054703-87054722 MS.gene013323:CDS 25.0%
!! ATTTAAGAGGATTTTCTTGA+GGG - chr3.4:87054241-87054260 MS.gene013323:intron 25.0%
!! ATTTTAGATGCTGAAAAGTT+AGG - chr3.4:87054289-87054308 MS.gene013323:intron 25.0%
!! TAACTACATTTTACTACATC+AGG - chr3.4:87052089-87052108 MS.gene013323:intron 25.0%
!! TTGACTTGATTATAGAACAT+TGG + chr3.4:87055382-87055401 None:intergenic 25.0%
!! TTTTGTGCCTAAATAATAAC+TGG - chr3.4:87054134-87054153 MS.gene013323:intron 25.0%
!!! ACAAAAGTGTTAATCATTTG+TGG - chr3.4:87056016-87056035 MS.gene013323:intron 25.0%
!!! ACAACTTTCTCCTATTTTTA+AGG + chr3.4:87055717-87055736 None:intergenic 25.0%
!!! ATTCCTTTTATTTTCAGGAA+AGG - chr3.4:87056691-87056710 MS.gene013323:intron 25.0%
!!! CAACTTTCTCCTATTTTTAA+GGG + chr3.4:87055716-87055735 None:intergenic 25.0%
!!! CCATTTAACAGTTTTGATAA+TGG - chr3.4:87051653-87051672 MS.gene013323:intron 25.0%
!!! TATATTGCAAAGTTTTAGTC+AGG - chr3.4:87053331-87053350 MS.gene013323:CDS 25.0%
!!! TTCCATACAGATTACTTTTA+CGG - chr3.4:87056233-87056252 MS.gene013323:intron 25.0%
AAACAAGCCTATATCTCTAT+AGG + chr3.4:87055306-87055325 None:intergenic 30.0%
AAAGAATCCAAGTATATCAG+AGG - chr3.4:87051302-87051321 MS.gene013323:CDS 30.0%
AAAGTAATCTGTATGGAACT+CGG + chr3.4:87056231-87056250 None:intergenic 30.0%
AAAGTTATCGTGTTCATAAC+TGG + chr3.4:87052384-87052403 None:intergenic 30.0%
AAGCAAGTGAAATAATGAGA+TGG + chr3.4:87056570-87056589 None:intergenic 30.0%
AAGGGAAATGATAGATGAAA+CGG + chr3.4:87056992-87057011 None:intergenic 30.0%
AAGTTGTGTATTGAATGCAT+TGG - chr3.4:87055485-87055504 MS.gene013323:intron 30.0%
ACAATCTTATTACACAATGC+AGG + chr3.4:87056165-87056184 None:intergenic 30.0%
ACATTATAGAACTGTAGCAT+TGG - chr3.4:87051628-87051647 MS.gene013323:intron 30.0%
ACTTGATTATAGAACATTGG+TGG + chr3.4:87055379-87055398 None:intergenic 30.0%
AGCATGATGTACAGAAATAT+TGG + chr3.4:87054337-87054356 None:intergenic 30.0%
AGGTTCATATTATAGCTTCT+TGG - chr3.4:87051913-87051932 MS.gene013323:intron 30.0%
AGTCCTTTCCTGAAAATAAA+AGG + chr3.4:87056697-87056716 None:intergenic 30.0%
ATATCATCTGTGCATCATAT+TGG - chr3.4:87053925-87053944 MS.gene013323:CDS 30.0%
ATCCTATTCTTTCTTCTTTG+AGG + chr3.4:87054180-87054199 None:intergenic 30.0%
ATCTCTAAACAATGATAGCA+AGG + chr3.4:87052047-87052066 None:intergenic 30.0%
ATTACCAAGTTTACTTGATG+GGG + chr3.4:87053310-87053329 None:intergenic 30.0%
CAACACAAACCAAAATATGT+AGG + chr3.4:87052504-87052523 None:intergenic 30.0%
CAATTTAGGGAGAATGAAAA+AGG - chr3.4:87054072-87054091 MS.gene013323:intron 30.0%
CAGAAATATTGGACTTAAAC+TGG + chr3.4:87054326-87054345 None:intergenic 30.0%
CATAATATGGTCACAAATGA+GGG + chr3.4:87056870-87056889 None:intergenic 30.0%
CTCTTAATTAGCATAGGATT+TGG + chr3.4:87051534-87051553 None:intergenic 30.0%
CTTAAATGCATCAAAAGTGA+AGG + chr3.4:87054395-87054414 None:intergenic 30.0%
CTTCAATAGCTCATAATCTT+TGG - chr3.4:87054978-87054997 MS.gene013323:intron 30.0%
GGAATCAATATAACTGGAAA+GGG + chr3.4:87055940-87055959 None:intergenic 30.0%
GTATAACAAGAAGATGAAGA+TGG + chr3.4:87051405-87051424 None:intergenic 30.0%
GTATAGAAAGTGATGATACT+TGG + chr3.4:87051362-87051381 None:intergenic 30.0%
GTTATTATGAAGAGATGACA+AGG - chr3.4:87052954-87052973 MS.gene013323:intron 30.0%
TAATTACTAGTGTACAAGAG+AGG + chr3.4:87052595-87052614 None:intergenic 30.0%
TACCTCAAAGAAGAAAGAAT+AGG - chr3.4:87054175-87054194 MS.gene013323:intron 30.0%
TAGGTATGAGACAACTTAAT+CGG + chr3.4:87052485-87052504 None:intergenic 30.0%
TAGTAGAATTGAACAAGTGA+AGG + chr3.4:87051777-87051796 None:intergenic 30.0%
TATACAAAGACCTAGTGAAA+AGG - chr3.4:87053203-87053222 MS.gene013323:intron 30.0%
TATCATCTGTGCATCATATT+GGG - chr3.4:87053926-87053945 MS.gene013323:CDS 30.0%
TATCTGTCTGTTAGAAGTAA+TGG - chr3.4:87052131-87052150 MS.gene013323:intron 30.0%
TATGTGCAATTAACAAAGCA+CGG + chr3.4:87055638-87055657 None:intergenic 30.0%
TCATAATATGGTCACAAATG+AGG + chr3.4:87056871-87056890 None:intergenic 30.0%
TGAACTACCTATAGAGATAT+AGG - chr3.4:87055296-87055315 MS.gene013323:intron 30.0%
TGTGTTTGTTCCATCTTATT+CGG - chr3.4:87055141-87055160 MS.gene013323:intron 30.0%
TTGTATCGAAATAGGTCTTT+GGG - chr3.4:87052300-87052319 MS.gene013323:intron 30.0%
TTTAGTCAGGTAATATTGTG+TGG - chr3.4:87053344-87053363 MS.gene013323:CDS 30.0%
! AAAGATATGCTGTCTTTTAC+TGG - chr3.4:87054539-87054558 MS.gene013323:intron 30.0%
! ATGCATTTAAGATGTCTACA+TGG - chr3.4:87054404-87054423 MS.gene013323:intron 30.0%
! ATTTTCTTAATCGTATGTGC+AGG - chr3.4:87057066-87057085 MS.gene013323:CDS 30.0%
! GAAAGTTGTTTAGGTAGTTT+TGG - chr3.4:87055728-87055747 MS.gene013323:intron 30.0%
! TAGGTCTTTGGGTTAATAAT+AGG - chr3.4:87052311-87052330 MS.gene013323:intron 30.0%
! TATGCAGATTTTTCCTCAAT+CGG + chr3.4:87051609-87051628 None:intergenic 30.0%
! TGCATTTAAGATGTCTACAT+GGG - chr3.4:87054405-87054424 MS.gene013323:intron 30.0%
! TGGGTATGGATTTTCATAAA+AGG + chr3.4:87057165-87057184 None:intergenic 30.0%
! TGGTTTCTATTTTCTACAGA+AGG - chr3.4:87053032-87053051 MS.gene013323:intron 30.0%
! TGTCTCATACCTACATATTT+TGG - chr3.4:87052492-87052511 MS.gene013323:intron 30.0%
! TGTTGATGTCATCTTGTTTA+GGG - chr3.4:87052519-87052538 MS.gene013323:intron 30.0%
! TTTTCACTAGGTCTTTGTAT+AGG + chr3.4:87053204-87053223 None:intergenic 30.0%
!! AATGTATATTGGTGTTGATG+GGG + chr3.4:87054843-87054862 None:intergenic 30.0%
!! AATTCTACTTTTACCGATTG+AGG - chr3.4:87051593-87051612 MS.gene013323:intron 30.0%
!! ACTGAAGTTTTGGCATAAAT+CGG + chr3.4:87052412-87052431 None:intergenic 30.0%
!! CAATGTATATTGGTGTTGAT+GGG + chr3.4:87054844-87054863 None:intergenic 30.0%
!! TCTTTTACTGGTTGTACTTA+TGG - chr3.4:87054551-87054570 MS.gene013323:intron 30.0%
AAAAGACAAGGTTCATTACC+GGG - chr3.4:87057104-87057123 MS.gene013323:CDS 35.0%
AACTCAACAGAACAGAGAAT+TGG - chr3.4:87054758-87054777 MS.gene013323:intron 35.0%
AAGACCTAGTGAAAAGGAAA+TGG - chr3.4:87053209-87053228 MS.gene013323:intron 35.0%
AAGCCAACTGCGAAATATAA+AGG - chr3.4:87051893-87051912 MS.gene013323:intron 35.0%
AAGGTTAAGGTATGCTTCTA+AGG + chr3.4:87052761-87052780 None:intergenic 35.0%
AAGGTTATGGAATGACTATC+AGG - chr3.4:87052973-87052992 MS.gene013323:intron 35.0%
AAGTAATCTGTATGGAACTC+GGG + chr3.4:87056230-87056249 None:intergenic 35.0%
AATCCTGATATCTCCTTTCA+GGG + chr3.4:87052861-87052880 None:intergenic 35.0%
AATGAACGTTTATCCAACTG+AGG + chr3.4:87052685-87052704 None:intergenic 35.0%
ACAAAAGTTGTTCATCGTAG+AGG + chr3.4:87053012-87053031 None:intergenic 35.0%
ACAGAATCAAAAGAAACGGA+AGG + chr3.4:87055330-87055349 None:intergenic 35.0%
ACATGACGGTTAAAAAACAG+AGG - chr3.4:87054456-87054475 MS.gene013323:intron 35.0%
ACCTTTCCTAGATTCTCAAT+AGG + chr3.4:87053857-87053876 None:intergenic 35.0%
AGACCTAGTGAAAAGGAAAT+GGG - chr3.4:87053210-87053229 MS.gene013323:intron 35.0%
AGTTGGATAAACGTTCATTC+TGG - chr3.4:87052686-87052705 MS.gene013323:intron 35.0%
ATACTGACGAACAACAATTC+TGG + chr3.4:87053493-87053512 None:intergenic 35.0%
ATAGCAGTTGCATCGAAAAA+AGG + chr3.4:87053884-87053903 None:intergenic 35.0%
ATATTGGACTTAAACTGGCA+AGG + chr3.4:87054321-87054340 None:intergenic 35.0%
ATGAACGTTTATCCAACTGA+GGG + chr3.4:87052684-87052703 None:intergenic 35.0%
ATGAAGAGATGACAAGGTTA+TGG - chr3.4:87052960-87052979 MS.gene013323:intron 35.0%
ATGTGCAATTAACAAAGCAC+GGG + chr3.4:87055637-87055656 None:intergenic 35.0%
ATGTGGTTGATCTTCTTCAT+CGG + chr3.4:87051444-87051463 None:intergenic 35.0%
CAAGTATATCAGAGGTTTCA+TGG - chr3.4:87051310-87051329 MS.gene013323:CDS 35.0%
CATGAAACCTCTGATATACT+TGG + chr3.4:87051312-87051331 None:intergenic 35.0%
CATTTCATTGAATCCCTGAA+AGG - chr3.4:87052845-87052864 MS.gene013323:intron 35.0%
CGGAATCAATATAACTGGAA+AGG + chr3.4:87055941-87055960 None:intergenic 35.0%
CTAGGGAGACTACAAATTAT+TGG - chr3.4:87054720-87054739 MS.gene013323:CDS 35.0%
CTATGCGGAATCAATATAAC+TGG + chr3.4:87055946-87055965 None:intergenic 35.0%
CTCTTGTAAAATAGAGGAGA+CGG + chr3.4:87056129-87056148 None:intergenic 35.0%
CTTCAAAAGATGCAGATACA+AGG - chr3.4:87056331-87056350 MS.gene013323:CDS 35.0%
CTTCCCTAATCTAATCACTA+AGG - chr3.4:87054916-87054935 MS.gene013323:intron 35.0%
CTTGTATCGAAATAGGTCTT+TGG - chr3.4:87052299-87052318 MS.gene013323:intron 35.0%
GAAAAGACAAGGTTCATTAC+CGG - chr3.4:87057103-87057122 MS.gene013323:CDS 35.0%
GAAATGATAGATGAAACGGA+AGG + chr3.4:87056988-87057007 None:intergenic 35.0%
GAACCTTTATATTTCGCAGT+TGG + chr3.4:87051899-87051918 None:intergenic 35.0%
GAAGTCAATAAGAGGTGAAA+GGG + chr3.4:87057010-87057029 None:intergenic 35.0%
GCACCTTAGTGATTAGATTA+GGG + chr3.4:87054922-87054941 None:intergenic 35.0%
GTCTGCTATCTATAGCAAAA+AGG + chr3.4:87052620-87052639 None:intergenic 35.0%
GTGTTTGTTCCATCTTATTC+GGG - chr3.4:87055142-87055161 MS.gene013323:intron 35.0%
GTTTCTGATAGTTCAGAAAC+TGG - chr3.4:87056608-87056627 MS.gene013323:CDS 35.0%
TACTCTATTTCAGCATCAGT+TGG - chr3.4:87052733-87052752 MS.gene013323:intron 35.0%
TAGGTCTTTGTATAGGTCTT+TGG + chr3.4:87053197-87053216 None:intergenic 35.0%
TAGTGATTAGATTAGGGAAG+CGG + chr3.4:87054916-87054935 None:intergenic 35.0%
TCCATCTTATTCGGGAAATA+TGG - chr3.4:87055150-87055169 MS.gene013323:intron 35.0%
TCCTATTGAGAATCTAGGAA+AGG - chr3.4:87053853-87053872 MS.gene013323:intron 35.0%
TGAAGTCAATAAGAGGTGAA+AGG + chr3.4:87057011-87057030 None:intergenic 35.0%
TGACAGCATTAACACAGTAA+AGG + chr3.4:87053420-87053439 None:intergenic 35.0%
TGCAAACTGAAGTCAATAAG+AGG + chr3.4:87057018-87057037 None:intergenic 35.0%
TGCCGTAAAAGTAATCTGTA+TGG + chr3.4:87056238-87056257 None:intergenic 35.0%
TGTTCGAATTATGCAAGTTC+AGG - chr3.4:87051731-87051750 MS.gene013323:CDS 35.0%
TTTACCCCATCAAGTAAACT+TGG - chr3.4:87053303-87053322 MS.gene013323:CDS 35.0%
TTTCCTAGATTCTCAATAGG+AGG + chr3.4:87053854-87053873 None:intergenic 35.0%
! AATGAACCTTGTCTTTTCCT+TGG + chr3.4:87057101-87057120 None:intergenic 35.0%
! ACGGGTTTGATTAAGGATTT+TGG - chr3.4:87056480-87056499 MS.gene013323:intron 35.0%
! ACTACTGTTGCATTTGTTAC+AGG - chr3.4:87051793-87051812 MS.gene013323:intron 35.0%
! ATGTCATCTTGTTTAGGGTT+GGG - chr3.4:87052524-87052543 MS.gene013323:intron 35.0%
! CGGGTTTGATTAAGGATTTT+GGG - chr3.4:87056481-87056500 MS.gene013323:intron 35.0%
! CTACGATGAACAACTTTTGT+TGG - chr3.4:87053012-87053031 MS.gene013323:intron 35.0%
! CTGAAGAGCTGAGAATTTTA+AGG - chr3.4:87054591-87054610 MS.gene013323:intron 35.0%
! CTTGTATCTGCATCTTTTGA+AGG + chr3.4:87056333-87056352 None:intergenic 35.0%
! GCATTTAAGATGTCTACATG+GGG - chr3.4:87054406-87054425 MS.gene013323:intron 35.0%
! GTCTCCTCTATTTTACAAGA+GGG - chr3.4:87056128-87056147 MS.gene013323:intron 35.0%
! GTGTTGATGTCATCTTGTTT+AGG - chr3.4:87052518-87052537 MS.gene013323:intron 35.0%
! TTGATTAAGGATTTTGGGCT+TGG - chr3.4:87056486-87056505 MS.gene013323:intron 35.0%
! TTTGAGGTACAACTTTCGTA+AGG + chr3.4:87054164-87054183 None:intergenic 35.0%
! TTTGCTATAGATAGCAGACA+TGG - chr3.4:87052621-87052640 MS.gene013323:intron 35.0%
!! AAAGTATTTAAAGAGTGCCC+CGG + chr3.4:87055444-87055463 None:intergenic 35.0%
!! AGATTACTTTTACGGCATGT+GGG - chr3.4:87056241-87056260 MS.gene013323:intron 35.0%
!! AGCAGAGTACTAATTTTCAC+AGG + chr3.4:87053119-87053138 None:intergenic 35.0%
!! ATGTATATTGGTGTTGATGG+GGG + chr3.4:87054842-87054861 None:intergenic 35.0%
!! CTGAAGTTTTGGCATAAATC+GGG + chr3.4:87052411-87052430 None:intergenic 35.0%
!! GCAATGTATATTGGTGTTGA+TGG + chr3.4:87054845-87054864 None:intergenic 35.0%
!! GCAGAGTACTAATTTTCACA+GGG + chr3.4:87053118-87053137 None:intergenic 35.0%
!!! AGCATTTTGAGATGCATGAT+TGG + chr3.4:87055089-87055108 None:intergenic 35.0%
AAACACTTTACTTCCTGGTC+TGG - chr3.4:87052926-87052945 MS.gene013323:intron 40.0%
AAATGAGGGACTAAAAGGAG+AGG + chr3.4:87056856-87056875 None:intergenic 40.0%
AACTGGCTGAAGGAAAACAA+GGG + chr3.4:87052367-87052386 None:intergenic 40.0%
AACTTTAGTCATCCCTCAGT+TGG - chr3.4:87052669-87052688 MS.gene013323:intron 40.0%
AAGGTAATCTGCCTTCTATC+AGG - chr3.4:87056047-87056066 MS.gene013323:intron 40.0%
AATCCCTGAAAGGAGATATC+AGG - chr3.4:87052855-87052874 MS.gene013323:intron 40.0%
AATGAGGGACTAAAAGGAGA+GGG + chr3.4:87056855-87056874 None:intergenic 40.0%
ACACCAATATACATTGCTGC+AGG - chr3.4:87054848-87054867 MS.gene013323:intron 40.0%
ACCAATATACATTGCTGCAG+GGG - chr3.4:87054850-87054869 MS.gene013323:intron 40.0%
ACTGCCCTCTTGTAAAATAG+AGG + chr3.4:87056135-87056154 None:intergenic 40.0%
AGAAAAATGCCAACCTCCTT+TGG + chr3.4:87054803-87054822 None:intergenic 40.0%
AGAGCAAAAGAGTCATCGTT+GGG + chr3.4:87056103-87056122 None:intergenic 40.0%
AGATACAAGGAATGTGGTTC+TGG - chr3.4:87056344-87056363 MS.gene013323:CDS 40.0%
AGATGCAGATACAAGGAATG+TGG - chr3.4:87056338-87056357 MS.gene013323:CDS 40.0%
AGGAGATATCAGGATTGTTC+AGG - chr3.4:87052865-87052884 MS.gene013323:intron 40.0%
AGGATCTACGGGTTTGATTA+AGG - chr3.4:87056473-87056492 MS.gene013323:intron 40.0%
AGTGATTAGATTAGGGAAGC+GGG + chr3.4:87054915-87054934 None:intergenic 40.0%
ATAACTGGAAAGGGAACAGA+TGG + chr3.4:87055931-87055950 None:intergenic 40.0%
ATAATAACCAACTCCAGACC+AGG + chr3.4:87052942-87052961 None:intergenic 40.0%
ATCATTTGTGGCTGATCAGA+AGG - chr3.4:87056028-87056047 MS.gene013323:intron 40.0%
ATCTTCTTCATCGGTGATGA+AGG + chr3.4:87051435-87051454 None:intergenic 40.0%
CAATCCTGATATCTCCTTTC+AGG + chr3.4:87052862-87052881 None:intergenic 40.0%
CACCAATATACATTGCTGCA+GGG - chr3.4:87054849-87054868 MS.gene013323:intron 40.0%
CAGACAGATAGCGATCAAAT+CGG + chr3.4:87052121-87052140 None:intergenic 40.0%
CAGCTATGATACAAGTCGAT+GGG - chr3.4:87055900-87055919 MS.gene013323:intron 40.0%
CGCACCTTAGTGATTAGATT+AGG + chr3.4:87054923-87054942 None:intergenic 40.0%
CTAGGAAACACTTTACTTCC+TGG - chr3.4:87052921-87052940 MS.gene013323:intron 40.0%
CTGTCTGTTAGAAGTAATGG+TGG - chr3.4:87052134-87052153 MS.gene013323:intron 40.0%
CTTGAATTCAGTACCTGTCT+GGG + chr3.4:87055228-87055247 None:intergenic 40.0%
GAAACTAGAGAGCTAGTAGA+AGG - chr3.4:87056739-87056758 MS.gene013323:intron 40.0%
GACGGTTAAAAAACAGAGGT+TGG - chr3.4:87054460-87054479 MS.gene013323:intron 40.0%
GCCATATTTCCCGAATAAGA+TGG + chr3.4:87055154-87055173 None:intergenic 40.0%
GGTTAAAAAACAGAGGTTGG+TGG - chr3.4:87054463-87054482 MS.gene013323:intron 40.0%
GTCACAAATGAGGGACTAAA+AGG + chr3.4:87056861-87056880 None:intergenic 40.0%
GTGAAAAGGAAATGGGTGAT+TGG - chr3.4:87053217-87053236 MS.gene013323:intron 40.0%
GTTGGCTATCTATTATGTCG+TGG + chr3.4:87055996-87056015 None:intergenic 40.0%
TAACAAAGCACGGGTATCTA+TGG + chr3.4:87055628-87055647 None:intergenic 40.0%
TAACTGGAAAGGGAACAGAT+GGG + chr3.4:87055930-87055949 None:intergenic 40.0%
TAACTGGCTGAAGGAAAACA+AGG + chr3.4:87052368-87052387 None:intergenic 40.0%
TAATGCTGTCATTGCTGCAA+TGG - chr3.4:87053429-87053448 MS.gene013323:intron 40.0%
TAGAGCAAAAGAGTCATCGT+TGG + chr3.4:87056104-87056123 None:intergenic 40.0%
TAGCTCATAATCTTTGGGTG+AGG - chr3.4:87054984-87055003 MS.gene013323:intron 40.0%
TCAACAGAACAGAGAATTGG+AGG - chr3.4:87054761-87054780 MS.gene013323:intron 40.0%
TCAGCTATGATACAAGTCGA+TGG - chr3.4:87055899-87055918 MS.gene013323:intron 40.0%
TCGAACCACATATACACTCT+GGG + chr3.4:87057184-87057203 None:intergenic 40.0%
TCTCCTCCTATTGAGAATCT+AGG - chr3.4:87053848-87053867 MS.gene013323:intron 40.0%
TCTTGAATTCAGTACCTGTC+TGG + chr3.4:87055229-87055248 None:intergenic 40.0%
TGCAAGTCGAGAATCTGATT+TGG + chr3.4:87053762-87053781 None:intergenic 40.0%
TGCTGGGATAGAGATTAAAG+AGG - chr3.4:87053967-87053986 MS.gene013323:CDS 40.0%
TGTTACTACCACATGCTTCT+GGG - chr3.4:87053612-87053631 MS.gene013323:CDS 40.0%
TTGGGTATACACAGGATCTA+CGG - chr3.4:87056461-87056480 MS.gene013323:intron 40.0%
! CGTCTCCTCTATTTTACAAG+AGG - chr3.4:87056127-87056146 MS.gene013323:intron 40.0%
! GATACTTGGAGACAGTTTTC+TGG + chr3.4:87051348-87051367 None:intergenic 40.0%
! GATGTCATCTTGTTTAGGGT+TGG - chr3.4:87052523-87052542 MS.gene013323:intron 40.0%
! GCAGAGAACTACTGAAGTTT+TGG + chr3.4:87052422-87052441 None:intergenic 40.0%
! GGCATTTTTCTTCAAGCTCT+TGG - chr3.4:87054812-87054831 MS.gene013323:intron 40.0%
! TCACCCATTTCCTTTTCACT+AGG + chr3.4:87053216-87053235 None:intergenic 40.0%
!! AAAAACAGAGGTTGGTGGAT+CGG - chr3.4:87054468-87054487 MS.gene013323:intron 40.0%
!! AAGTATTTAAAGAGTGCCCC+GGG + chr3.4:87055443-87055462 None:intergenic 40.0%
!! ATTACTTTTACGGCATGTGG+GGG - chr3.4:87056243-87056262 MS.gene013323:intron 40.0%
!! CAGATTACTTTTACGGCATG+TGG - chr3.4:87056240-87056259 MS.gene013323:intron 40.0%
!! GATGTCCATTTTAGGTAGTG+AGG - chr3.4:87053561-87053580 MS.gene013323:CDS 40.0%
!! GATTACTTTTACGGCATGTG+GGG - chr3.4:87056242-87056261 MS.gene013323:intron 40.0%
!! TAGGTTCTGAGCATACATGA+CGG - chr3.4:87054442-87054461 MS.gene013323:intron 40.0%
!! TATAGGTCTTTGGAGCACAA+AGG + chr3.4:87053187-87053206 None:intergenic 40.0%
!!! ATTTTGTCCACTGACTCCAA+AGG - chr3.4:87054784-87054803 MS.gene013323:intron 40.0%
!!! TGTCTGGGTTGATTGTTTTG+CGG + chr3.4:87055213-87055232 None:intergenic 40.0%
AAAACGATGCATGTGATCCC+AGG - chr3.4:87054359-87054378 MS.gene013323:intron 45.0%
AAAGGAAATGGGTGATTGGC+TGG - chr3.4:87053221-87053240 MS.gene013323:intron 45.0%
AAATATGGCACGAGCTGTTG+AGG - chr3.4:87055165-87055184 MS.gene013323:intron 45.0%
AACTGGAAAGGGAACAGATG+GGG + chr3.4:87055929-87055948 None:intergenic 45.0%
AATATGGCACGAGCTGTTGA+GGG - chr3.4:87055166-87055185 MS.gene013323:intron 45.0%
ACAGATAGCGATCAAATCGG+TGG + chr3.4:87052118-87052137 None:intergenic 45.0%
ACTGGCTGAAGGAAAACAAG+GGG + chr3.4:87052366-87052385 None:intergenic 45.0%
AGTGAAGGACATTGTGATCC+TGG + chr3.4:87054380-87054399 None:intergenic 45.0%
ATCTTCCTCTAGACATCCAG+AGG - chr3.4:87053789-87053808 MS.gene013323:intron 45.0%
ATGGGGCTTCGTGGTAAATT+AGG - chr3.4:87054423-87054442 MS.gene013323:intron 45.0%
CAAAAGAGTCATCGTTGGGA+TGG + chr3.4:87056099-87056118 None:intergenic 45.0%
CAGAGTGTATATGTGGTTCG+AGG - chr3.4:87057183-87057202 MS.gene013323:CDS 45.0%
CATTGCTATCAACGAAGTGC+AGG - chr3.4:87056283-87056302 MS.gene013323:intron 45.0%
CCACATATACACTCTGGGTA+TGG + chr3.4:87057179-87057198 None:intergenic 45.0%
CCATACCCAGAGTGTATATG+TGG - chr3.4:87057176-87057195 MS.gene013323:CDS 45.0%
CTCGAACCACATATACACTC+TGG + chr3.4:87057185-87057204 None:intergenic 45.0%
CTGTTACTACCACATGCTTC+TGG - chr3.4:87053611-87053630 MS.gene013323:CDS 45.0%
CTTAATCGTATGTGCAGGCA+AGG - chr3.4:87057071-87057090 MS.gene013323:CDS 45.0%
CTTCAGTAGTTCTCTGCGTA+TGG - chr3.4:87052425-87052444 MS.gene013323:intron 45.0%
GAAGTGCATGATACATCGCA+CGG + chr3.4:87053823-87053842 None:intergenic 45.0%
GATCGAGAAATGTGAGGATG+TGG + chr3.4:87051461-87051480 None:intergenic 45.0%
GCAAAACAATCAACCCAGAC+AGG - chr3.4:87055212-87055231 MS.gene013323:intron 45.0%
GCTATAGATAGCAGACATGG+TGG - chr3.4:87052624-87052643 MS.gene013323:intron 45.0%
GCTGCAATGGCAATAAGAGA+TGG - chr3.4:87053442-87053461 MS.gene013323:intron 45.0%
GGACTCAATCAAATGCGAAC+TGG - chr3.4:87052155-87052174 MS.gene013323:intron 45.0%
GGAGAAAGCGAAGACGAAAA+TGG + chr3.4:87051384-87051403 None:intergenic 45.0%
GGTTCATTACCGGGAGTTAA+AGG - chr3.4:87057113-87057132 MS.gene013323:CDS 45.0%
GTCGTCCTCACTACCTAAAA+TGG + chr3.4:87053569-87053588 None:intergenic 45.0%
GTGAAGGACATTGTGATCCT+GGG + chr3.4:87054379-87054398 None:intergenic 45.0%
TAGAGAGCTAGTAGAAGGAG+CGG - chr3.4:87056744-87056763 MS.gene013323:intron 45.0%
TCACATTTCTCGATCTCACG+AGG - chr3.4:87051466-87051485 MS.gene013323:intron 45.0%
TCAGGAACTTCCCAAGAACT+TGG - chr3.4:87052883-87052902 MS.gene013323:intron 45.0%
TCAGGTTCTCATGGCGTTTA+TGG - chr3.4:87056065-87056084 MS.gene013323:intron 45.0%
TCCCCTGCAGCAATGTATAT+TGG + chr3.4:87054854-87054873 None:intergenic 45.0%
TCGTGAGATCGAGAAATGTG+AGG + chr3.4:87051467-87051486 None:intergenic 45.0%
TCGTGTTCATAACTGGCTGA+AGG + chr3.4:87052377-87052396 None:intergenic 45.0%
TGCCTTCTATCAGGTTCTCA+TGG - chr3.4:87056056-87056075 MS.gene013323:intron 45.0%
TGGGTATACACAGGATCTAC+GGG - chr3.4:87056462-87056481 MS.gene013323:intron 45.0%
! AACTGTCAAGGCATTTCCTC+TGG + chr3.4:87056639-87056658 None:intergenic 45.0%
! ACTGTCAAGGCATTTCCTCT+GGG + chr3.4:87056638-87056657 None:intergenic 45.0%
! GCAAGACTCGAGGTATTTCT+GGG - chr3.4:87052708-87052727 MS.gene013323:intron 45.0%
! TAAAGTGTTTCCTAGCCCGA+GGG + chr3.4:87052916-87052935 None:intergenic 45.0%
! TCCTTGAACCTAGGTGGTTT+TGG + chr3.4:87051821-87051840 None:intergenic 45.0%
! TTCTGGTTGTGGGTATCGTT+GGG - chr3.4:87056361-87056380 MS.gene013323:intron 45.0%
! TTTACTTCCTGGTCTGGAGT+TGG - chr3.4:87052932-87052951 MS.gene013323:intron 45.0%
!! AAGGAATGTGGTTCTGGTTG+TGG - chr3.4:87056350-87056369 MS.gene013323:CDS 45.0%
!! AGGAATGTGGTTCTGGTTGT+GGG - chr3.4:87056351-87056370 MS.gene013323:CDS 45.0%
!! AGGATTTTCTTGAGGGCACA+TGG - chr3.4:87054248-87054267 MS.gene013323:intron 45.0%
!! AGTATTTAAAGAGTGCCCCG+GGG + chr3.4:87055442-87055461 None:intergenic 45.0%
AAATGTTAACGAGTGCCCCC+GGG - chr3.4:87055423-87055442 MS.gene013323:intron 50.0%
AGAACTTGGAAGCTACCCCT+CGG - chr3.4:87052897-87052916 MS.gene013323:intron 50.0%
AGGGGTAGCTTCCAAGTTCT+TGG + chr3.4:87052897-87052916 None:intergenic 50.0%
AGGGTGGAATCCATGACTGT+TGG + chr3.4:87051867-87051886 None:intergenic 50.0%
ATTACCGGGAGTTAAAGGCC+GGG - chr3.4:87057118-87057137 MS.gene013323:CDS 50.0%
ATTGCTGCAGGGGAGATCTA+TGG - chr3.4:87054860-87054879 MS.gene013323:intron 50.0%
CAAGGACGACGAACAGCTTT+GGG - chr3.4:87051835-87051854 MS.gene013323:intron 50.0%
CACTGTCACATATGGTGCAG+CGG - chr3.4:87056767-87056786 MS.gene013323:intron 50.0%
CATTACCGGGAGTTAAAGGC+CGG - chr3.4:87057117-87057136 MS.gene013323:CDS 50.0%
CGCCATGAGAACCTGATAGA+AGG + chr3.4:87056061-87056080 None:intergenic 50.0%
CTCAACCTCTGGATGTCTAG+AGG + chr3.4:87053797-87053816 None:intergenic 50.0%
CTGGCTGAAGGAAAACAAGG+GGG + chr3.4:87052365-87052384 None:intergenic 50.0%
GAAATGTTAACGAGTGCCCC+CGG - chr3.4:87055422-87055441 MS.gene013323:intron 50.0%
GAAGCAGCACAGAAGGAGAT+GGG - chr3.4:87056305-87056324 MS.gene013323:intron 50.0%
GCCAAAACCACCTAGGTTCA+AGG - chr3.4:87051817-87051836 MS.gene013323:intron 50.0%
GGGGTAGCTTCCAAGTTCTT+GGG + chr3.4:87052896-87052915 None:intergenic 50.0%
GGGTGGAATCCATGACTGTT+GGG + chr3.4:87051866-87051885 None:intergenic 50.0%
GGTGCTCCAAGGAAAAGACA+AGG - chr3.4:87057092-87057111 MS.gene013323:CDS 50.0%
GTTCATTCTGGCAAGACTCG+AGG - chr3.4:87052698-87052717 MS.gene013323:intron 50.0%
TACAGGTGCCAAAACCACCT+AGG - chr3.4:87051810-87051829 MS.gene013323:intron 50.0%
TCAAGGACGACGAACAGCTT+TGG - chr3.4:87051834-87051853 MS.gene013323:intron 50.0%
TCATGGCGTTTATGGCATGC+TGG - chr3.4:87056073-87056092 MS.gene013323:intron 50.0%
TGAAGGAAAACAAGGGGGGA+AGG + chr3.4:87052360-87052379 None:intergenic 50.0%
TGCGGTGATCTAAGAACCTG+CGG + chr3.4:87055195-87055214 None:intergenic 50.0%
TGGCTGAAGGAAAACAAGGG+GGG + chr3.4:87052364-87052383 None:intergenic 50.0%
TGGGTTTCTCCCAACAGTCA+TGG - chr3.4:87051854-87051873 MS.gene013323:intron 50.0%
TGTTCGTCGTCCTTGAACCT+AGG + chr3.4:87051830-87051849 None:intergenic 50.0%
! AAAGTGTTTCCTAGCCCGAG+GGG + chr3.4:87052915-87052934 None:intergenic 50.0%
! GGCAAGACTCGAGGTATTTC+TGG - chr3.4:87052707-87052726 MS.gene013323:intron 50.0%
! GGGTATCGTTGGGTATACAC+AGG - chr3.4:87056453-87056472 MS.gene013323:intron 50.0%
! GTAAAGTGTTTCCTAGCCCG+AGG + chr3.4:87052917-87052936 None:intergenic 50.0%
! GTTCTGGTTGTGGGTATCGT+TGG - chr3.4:87056360-87056379 MS.gene013323:intron 50.0%
!! ACAAAGGTGTCTCTGGTGAG+TGG + chr3.4:87053171-87053190 None:intergenic 50.0%
!! GTATTTAAAGAGTGCCCCGG+GGG + chr3.4:87055441-87055460 None:intergenic 50.0%
!! TCGCAGTTGGCTTGACACAA+GGG + chr3.4:87051886-87051905 None:intergenic 50.0%
!! TTCGCAGTTGGCTTGACACA+AGG + chr3.4:87051887-87051906 None:intergenic 50.0%
!! TTGGAGCACAAAGGTGTCTC+TGG + chr3.4:87053178-87053197 None:intergenic 50.0%
!! TTGTCCACTGACTCCAAAGG+AGG - chr3.4:87054787-87054806 MS.gene013323:intron 50.0%
AATGTTAACGAGTGCCCCCG+GGG - chr3.4:87055424-87055443 MS.gene013323:intron 55.0%
AGGAGCGGCACTGTCACATA+TGG - chr3.4:87056759-87056778 MS.gene013323:intron 55.0%
AGTGCAGGAAGCAGCACAGA+AGG - chr3.4:87056298-87056317 MS.gene013323:intron 55.0%
CTTCAGTCCTGAAACGTGCC+CGG + chr3.4:87057139-87057158 None:intergenic 55.0%
GAACTTGGAAGCTACCCCTC+GGG - chr3.4:87052898-87052917 MS.gene013323:intron 55.0%
GATAGCAGACATGGTGGCTG+TGG - chr3.4:87052630-87052649 MS.gene013323:intron 55.0%
GATGTCTACATGGGGCTTCG+TGG - chr3.4:87054414-87054433 MS.gene013323:intron 55.0%
GGAAGCAGCACAGAAGGAGA+TGG - chr3.4:87056304-87056323 MS.gene013323:intron 55.0%
TCAGAAACTGGACCACCCAG+AGG - chr3.4:87056620-87056639 MS.gene013323:CDS 55.0%
TCGTCGTCCTTGAACCTAGG+TGG + chr3.4:87051827-87051846 None:intergenic 55.0%
TCTTGTTAACGAGTGCCCCC+GGG + chr3.4:87055572-87055591 None:intergenic 55.0%
TGCAGCGGATGCACAAGAAC+AGG - chr3.4:87056782-87056801 MS.gene013323:intron 55.0%
TTAAAGGCCGGGCACGTTTC+AGG - chr3.4:87057129-87057148 MS.gene013323:CDS 55.0%
! CTTGAGGGCACATGGATGCA+TGG - chr3.4:87054256-87054275 MS.gene013323:intron 55.0%
! GAAATGGGTGATTGGCTGGC+TGG - chr3.4:87053225-87053244 MS.gene013323:intron 55.0%
! GTCAAGGCATTTCCTCTGGG+TGG + chr3.4:87056635-87056654 None:intergenic 55.0%
! GTCTTGTTAACGAGTGCCCC+CGG + chr3.4:87055573-87055592 None:intergenic 55.0%
! TGTGCATGCCCAGAAGCATG+TGG + chr3.4:87053623-87053642 None:intergenic 55.0%
!! CAGTTGGCTTGACACAAGGG+TGG + chr3.4:87051883-87051902 None:intergenic 55.0%
!! CCAACCTCCTTTGGAGTCAG+TGG + chr3.4:87054794-87054813 None:intergenic 55.0%
!! CCACTGACTCCAAAGGAGGT+TGG - chr3.4:87054791-87054810 MS.gene013323:intron 55.0%
ATGGAACTCGGGACGCTAGC+CGG + chr3.4:87056219-87056238 None:intergenic 60.0%
CTTGTTAACGAGTGCCCCCG+GGG + chr3.4:87055571-87055590 None:intergenic 60.0%
GCTGCAGGGGAGATCTATGG+TGG - chr3.4:87054863-87054882 MS.gene013323:intron 60.0%
GTGGATCGGCTGAGATCACG+CGG - chr3.4:87054482-87054501 MS.gene013323:intron 60.0%
TCGCACGGCATCTCAACCTC+TGG + chr3.4:87053808-87053827 None:intergenic 60.0%
TGGATCGGCTGAGATCACGC+GGG - chr3.4:87054483-87054502 MS.gene013323:intron 60.0%
TGGGCAGGAAGCAGCACAGA+AGG - chr3.4:87056380-87056399 MS.gene013323:intron 60.0%
! GGTTGTGGGTATCGTTGGGC+AGG - chr3.4:87056365-87056384 MS.gene013323:intron 60.0%
! TGTGCAGGCAAGGTGCTCCA+AGG - chr3.4:87057081-87057100 MS.gene013323:CDS 60.0%
CGTGCCCGGCCTTTAACTCC+CGG + chr3.4:87057125-87057144 None:intergenic 65.0%
GAGCTGTTGAGGGACACCGC+AGG - chr3.4:87055176-87055195 MS.gene013323:intron 65.0%
GGATCGGCTGAGATCACGCG+GGG - chr3.4:87054484-87054503 MS.gene013323:intron 65.0%
TGGAAGCTACCCCTCGGGCT+AGG - chr3.4:87052903-87052922 MS.gene013323:intron 65.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 87051260 87057226 87051260 ID=MS.gene013323
chr3.4 mRNA 87051260 87057226 87051260 ID=MS.gene013323.t1;Parent=MS.gene013323
chr3.4 exon 87056999 87057226 87056999 ID=MS.gene013323.t1.exon1;Parent=MS.gene013323.t1
chr3.4 CDS 87056999 87057226 87056999 ID=cds.MS.gene013323.t1;Parent=MS.gene013323.t1
chr3.4 exon 87056572 87056671 87056572 ID=MS.gene013323.t1.exon2;Parent=MS.gene013323.t1
chr3.4 CDS 87056572 87056671 87056572 ID=cds.MS.gene013323.t1;Parent=MS.gene013323.t1
chr3.4 exon 87056308 87056375 87056308 ID=MS.gene013323.t1.exon3;Parent=MS.gene013323.t1
chr3.4 CDS 87056308 87056375 87056308 ID=cds.MS.gene013323.t1;Parent=MS.gene013323.t1
chr3.4 exon 87055767 87055855 87055767 ID=MS.gene013323.t1.exon4;Parent=MS.gene013323.t1
chr3.4 CDS 87055767 87055855 87055767 ID=cds.MS.gene013323.t1;Parent=MS.gene013323.t1
chr3.4 exon 87055492 87055669 87055492 ID=MS.gene013323.t1.exon5;Parent=MS.gene013323.t1
chr3.4 CDS 87055492 87055669 87055492 ID=cds.MS.gene013323.t1;Parent=MS.gene013323.t1
chr3.4 exon 87054612 87054740 87054612 ID=MS.gene013323.t1.exon6;Parent=MS.gene013323.t1
chr3.4 CDS 87054612 87054740 87054612 ID=cds.MS.gene013323.t1;Parent=MS.gene013323.t1
chr3.4 exon 87053874 87054010 87053874 ID=MS.gene013323.t1.exon7;Parent=MS.gene013323.t1
chr3.4 CDS 87053874 87054010 87053874 ID=cds.MS.gene013323.t1;Parent=MS.gene013323.t1
chr3.4 exon 87053549 87053762 87053549 ID=MS.gene013323.t1.exon8;Parent=MS.gene013323.t1
chr3.4 CDS 87053549 87053762 87053549 ID=cds.MS.gene013323.t1;Parent=MS.gene013323.t1
chr3.4 exon 87053253 87053437 87053253 ID=MS.gene013323.t1.exon9;Parent=MS.gene013323.t1
chr3.4 CDS 87053253 87053437 87053253 ID=cds.MS.gene013323.t1;Parent=MS.gene013323.t1
chr3.4 exon 87051683 87051778 87051683 ID=MS.gene013323.t1.exon10;Parent=MS.gene013323.t1
chr3.4 CDS 87051683 87051778 87051683 ID=cds.MS.gene013323.t1;Parent=MS.gene013323.t1
chr3.4 exon 87051260 87051398 87051260 ID=MS.gene013323.t1.exon11;Parent=MS.gene013323.t1
chr3.4 CDS 87051260 87051398 87051260 ID=cds.MS.gene013323.t1;Parent=MS.gene013323.t1
Gene Sequence

>MS.gene013323

ATGCAGACACGGGTTTTTCTGAATCGCAGCGTGAAGAAGAAGAAAGAATCCAAGTATATCAGAGGTTTCATGGCTAGATTTCATACCAGAAAACTGTCTCCAAGTATCATCACTTTCTATACCATTTTCGTCTTCGCTTTCTCCATCTTCATCTTCTTGTTATACGTAAGAACCTTCATCACCGATGAAGAAGATCAACCACATCCTCACATTTCTCGATCTCACGAGGTACACATCAATCTTCGATTTGATCCAATTTTTTGTTAGAGATCCAAATCCTATGCTAATTAAGAGTAATTAATCTTGATTATTGAAATTCTCTTGACTATTTTAAATTCTACTTTTACCGATTGAGGAAAAATCTGCATACATTATAGAACTGTAGCATTGGATCCATTTAACAGTTTTGATAATGGAGAATGCATCACAACACATGTGAACAATGTCTGCAATTATTTGTTGAGATTTTATTGTTCGAATTATGCAAGTTCAGGCTTCAATTTGTGTTTTTGATCCTTCACTTGTTCAATTCTACTACTGTTGCATTTGTTACAGGTGCCAAAACCACCTAGGTTCAAGGACGACGAACAGCTTTGGGTTTCTCCCAACAGTCATGGATTCCACCCTTGTGTCAAGCCAACTGCGAAATATAAAGGTTCATATTATAGCTTCTTGGTGAATTAACTTTTCTTATTTCACTCACTTTTGCTCGTTTTATTCAAAGTTTTGTGTTTCAGCCATTAAAAGAAAGTCTGTAAATGTTTGTTTGTCGAGCATAATATAGCCTTGCTATCATTGTTTAGAGATTTTTGTCTCTCGTGCTAATTCATAACTACATTTTACTACATCAGGTGTCCACCGATTTGATCGCTATCTGTCTGTTAGAAGTAATGGTGGACTCAATCAAATGCGAACTGGTGTAAGTAGCTTCTTACTCTTATGTCTTTAATTGTATGCACAGTCATAAATTCTCATTCAATTACACTTTCAAAACTTTGGTACATGATAATACATATTGTATAGTTGCTATTTCAAATTTCTTGTATCGAAATAGGTCTTTGGGTTAATAATAGGAATTCAATATTCATGTTCTTGTTCCTTCCCCCCTTGTTTTCCTTCAGCCAGTTATGAACACGATAACTTTTTATCCCGATTTATGCCAAAACTTCAGTAGTTCTCTGCGTATGGTAAACAAACATAATAAATTGTTTATGCTGAAGTGCCGATTAAGTTGTCTCATACCTACATATTTTGGTTTGTGTTGATGTCATCTTGTTTAGGGTTGGGTAGTGACTAAGTGTGAAGCCAACTTTTGTTCTAATTATATATTTTCCTCTCTTGTACACTAGTAATTAATCCTTTTTGCTATAGATAGCAGACATGGTGGCTGTGGCACATATAATGAATGCAACTTTAGTCATCCCTCAGTTGGATAAACGTTCATTCTGGCAAGACTCGAGGTATTTCTGGGTATACTCTATTTCAGCATCAGTTGGCTCCTTAGAAGCATACCTTAACCTTTTCTAATTTTATCTTCATTATTGGGCATGTGCACAGTGTATTTTCAGACGTATTCGATGAGTTTCATTTCATTGAATCCCTGAAAGGAGATATCAGGATTGTTCAGGAACTTCCCAAGAACTTGGAAGCTACCCCTCGGGCTAGGAAACACTTTACTTCCTGGTCTGGAGTTGGTTATTATGAAGAGATGACAAGGTTATGGAATGACTATCAGGTACTCAAGTTTTTCCTCTACGATGAACAACTTTTGTTGGTTTCTATTTTCTACAGAAGGCTTCATTGTAAAACTTGCTAATTATTAAACATACTTTAGCTTGCTTTATCTCTAATAGCTCCCTGTGAAAATTAGTACTCTGCTTTCTATTTGTGAAAAGTAGCAGTATGTCACCACTCACCAGAGACACCTTTGTGCTCCAAAGACCTATACAAAGACCTAGTGAAAAGGAAATGGGTGATTGGCTGGCTGGCAGCTCAATTTAAATATTTGTCATATGAATATGGAATAGGCATAGTTGAGATATTTTTACCCCATCAAGTAAACTTGGTAATATATATTGCAAAGTTTTAGTCAGGTAATATTGTGTGGCAAAATATATGGAGAAGTTTATTTGTGTTAGAAGAATATAGAATGCTCATCCTTTACTGTGTTAATGCTGTCATTGCTGCAATGGCAATAAGAGATGGATGTATTATAGTTGTATAGTGTATACCAGAATTGTTGTTCGTCAGTATTTAAATTGCTTTGTTTTCGAATGCAATGCAACGCAACATGTTTTTAAAGATGTCCATTTTAGGTAGTGAGGACGACATTAGATTTTTCGTTGACATTTCTGTTACTACCACATGCTTCTGGGCATGCACAAACTTAATATCCGTTCTCAAAGATTTGATTTTTCATATTTTGTCTCTGTGCTACACATTTCGTAGTCTGAATGTCTTAAGCAAAAAATGTTTTGATTTTTCAGGTGATTCATGTTGCCAAATCAGATTCTCGACTTGCAAACAATGATCTTCCTCTAGACATCCAGAGGTTGAGATGCCGTGCGATGTATCATGCACTTCAATTTTCTCCTCCTATTGAGAATCTAGGAAAGGTTTGTCCTTTTTTCGATGCAACTGCTATGCTCCTATATATGTCATAGAAATATCATCTGTGCATCATATTGGGATTTAGTAACTGATAAAATGCTGGGATAGAGATTAAAGAGGAAATAACCGATTCAATTCTCACATTTTTTTTTTTGTGTATTAAATTATAATACTAACATTTTTTGAAGCATTTTAAATGAAGCAATTTAGGGAGAATGAAAAAGGTAACATGTAAAGCTACAAATTAAAATGAACTGCTTTCCATTTTGTGCCTAAATAATAACTGGAAATCCTTACGAAAGTTGTACCTCAAAGAAGAAAGAATAGGATTCAGACTATTGTCACTACCATATCATTGAACGAATGTTTTAATTTAAGAGGATTTTCTTGAGGGCACATGGATGCATGGCAAATTAAATATTTTAGATGCTGAAAAGTTAGGTTCAAACCTTGCCAGTTTAAGTCCAATATTTCTGTACATCATGCTAGAAAACGATGCATGTGATCCCAGGATCACAATGTCCTTCACTTTTGATGCATTTAAGATGTCTACATGGGGCTTCGTGGTAAATTAGGTTCTGAGCATACATGACGGTTAAAAAACAGAGGTTGGTGGATCGGCTGAGATCACGCGGGGAAAGATATATTGCTCTCCATCTAAGATATGAGAAAGATATGCTGTCTTTTACTGGTTGTACTTATGGTCTGACAGATGCAGAATCTGAAGAGCTGAGAATTTTAAGGTGAGATCAGTTATTATATGTGTGCTGAATCATTCTACCATGTATTTGAAATATCTATGCTCAGTAATTCCACTGATTTTTTTTAAGAAAAGTTTGTTTCAATTCTTCTAGGGAGACTACAAATTATTGGAAAGTAAAAAAGATAAACTCAACAGAACAGAGAATTGGAGGATTTTGTCCACTGACTCCAAAGGAGGTTGGCATTTTTCTTCAAGCTCTTGGCTTTCCCCCATCAACACCAATATACATTGCTGCAGGGGAGATCTATGGTGGTAATACTCATCTATCAGAGCTTTCTTCCCGCTTCCCTAATCTAATCACTAAGGTGCGCAAATTAGTATGTTGTCGAACTGCGTTAACAATTACTTCAATAGCTCATAATCTTTGGGTGAGGTGCAGTGTTCACCTGATTAAGTTGATTGATAAATGTTAACAGGAATCTCTTGCAACTTCTGAAGAGCTGAAAGCTTTCACCAATCATGCATCTCAAAATGCTGCAGTCGATTACATAATCTCTGTAGAGAGTGATGTGTTTGTTCCATCTTATTCGGGAAATATGGCACGAGCTGTTGAGGGACACCGCAGGTTCTTAGATCACCGCAAAACAATCAACCCAGACAGGTACTGAATTCAAGAAATTATAGTTGTAGAATTTTCTTGGGAATGTTGATACATTTGAGTTTTGAACTACCTATAGAGATATAGGCTTGTTTTCCTTCCGTTTCTTTTGATTCTGTCTTTCCCAAAATGTATTTATTTTTTTCCACCAATGTTCTATAATCAAGTCAATAATCGATGATTAAAAAAGGGAAATGTTAACGAGTGCCCCCGGGGCACTCTTTAAATACTTTAAATGGTAAGTTTTGTATGAAAAGTTGTGTATTGAATGCATTGGAAATCGTAATAGTTGACTTTTGAAAATAATAATTGCTAAATTTGGGATGCTTAAAGAGTGCCCCGGGGGCACTCGTTAACAAGACCCTTAAAAAAAGGATCAAACTTAGGTTCAGTACCATAGATACCCGTGCTTTGTTAATTGCACATACAAATATCACCAAAATTGTTTCCCTTAAAAATTACAAATATCACCAAAATTGTTTCCCTTAAAAATAGGAGAAAGTTGTTTAGGTAGTTTTGGTAAAATTTCAGTGTATAACAGTACAAACAGCACTTATAGTACTGTATCTAAGTTTTTTCCTTAAAAAAATAAAAAATCGATCATCTAAGTTTTTCTCAAGCTTGTCTGAGCATCATATTCAGCTTTTCTCAAATTTTCATTGTCTACTTCAGCTATGATACAAGTCGATGGGATTCCCCATCTGTTCCCTTTCCAGTTATATTGATTCCGCATAGTATTAGTATATAAACCCTTATTTTTTTCCACGACATAATAGATAGCCAACACAAAAGTGTTAATCATTTGTGGCTGATCAGAAGGTAATCTGCCTTCTATCAGGTTCTCATGGCGTTTATGGCATGCTGGCCATCCCAACGATGACTCTTTTGCTCTAAACCGTCTCCTCTATTTTACAAGAGGGCAGTGTCAGTGCCTGCATTGTGTAATAAGATTGTGTCAAAAATGAAAACAAATAGAGAAAAAAAGCCGGCTAGCGTCCCGAGTTCCATACAGATTACTTTTACGGCATGTGGGGGAATGCATGCTATGAAAGCATTGCTATCAACGAAGTGCAGGAAGCAGCACAGAAGGAGATGGGTGCCTTCAAAAGATGCAGATACAAGGAATGTGGTTCTGGTTGTGGGTATCGTTGGGCAGGAAGCAGCACAGAAGGAGATGGGTGCCTTCAAAAGATGCAGATACAAGGAATGTGGTTCTGGTTGTGGGTATCGTTGGGTATACACAGGATCTACGGGTTTGATTAAGGATTTTGGGCTTGGCCCATATATATATATATATATATATATATATATATATATATATATTTTAAATAATTTACCATCTCATTATTTCACTTGCTTCTGTAGAGAAATACTTGAGTTTCTGATAGTTCAGAAACTGGACCACCCAGAGGAAATGCCTTGACAGTTTTAATTCTTCAATTTATCTCTTTAATCTTTGTATTCCTTTTATTTTCAGGAAAGGACTTGTTGAAATATTTGATAAGCTGGAAACTAGAGAGCTAGTAGAAGGAGCGGCACTGTCACATATGGTGCAGCGGATGCACAAGAACAGGTCAGTTTCTTGCTTAATGTTAAATCATGTTTTTGGGCACAATAGATTCCCTCTCCTTTTAGTCCCTCATTTGTGACCATATTATGAATGATTTGATGATTAGACGTTAAAATCGTTCATTTTTCTTTAACATTGAAGTTTTTTTTTGTTTTGTTTTTGCCTTTGAATCTGTAATATCTTTCCTTCCGTTTCATCTATCATTTCCCTTTCACCTCTTATTGACTTCAGTTTGCAAATTATTCAAGTCAAAATAACTTCCATAATTTTCTTAATCGTATGTGCAGGCAAGGTGCTCCAAGGAAAAGACAAGGTTCATTACCGGGAGTTAAAGGCCGGGCACGTTTCAGGACTGAAGAGTCCTTTTATGAAAATCCATACCCAGAGTGTATATGTGGTTCGAGGAACAAACTAGAAAGAACGTGA
Protein sequence

>MS.gene013323.t1

MQTRVFLNRSVKKKKESKYIRGFMARFHTRKLSPSIITFYTIFVFAFSIFIFLLYVRTFITDEEDQPHPHISRSHEVPKPPRFKDDEQLWVSPNSHGFHPCVKPTAKYKGVHRFDRYLSVRSNGGLNQMRTGIADMVAVAHIMNATLVIPQLDKRSFWQDSSVFSDVFDEFHFIESLKGDIRIVQELPKNLEATPRARKHFTSWSGVGYYEEMTRLWNDYQVIHVAKSDSRLANNDLPLDIQRLRCRAMYHALQFSPPIENLGKRLVDRLRSRGERYIALHLRYEKDMLSFTGCTYGLTDAESEELRILRETTNYWKVKKINSTEQRIGGFCPLTPKEVGIFLQALGFPPSTPIYIAAGEIYGGNTHLSELSSRFPNLITKESLATSEELKAFTNHASQNAAVDYIISVESDVFVPSYSGNMARAVEGHRRFLDHRKTINPDRKGLVEIFDKLETRELVEGAALSHMVQRMHKNRQGAPRKRQGSLPGVKGRARFRTEESFYENPYPECICGSRNKLERT