Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014188.t1 | AES74340.2 | 98.8 | 860 | 10 | 0 | 1 | 860 | 121 | 980 | 0.00E+00 | 1682.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014188.t1 | B9HQZ6 | 77.4 | 860 | 191 | 1 | 1 | 860 | 138 | 994 | 0.0e+00 | 1359.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014188.t1 | G7J996 | 98.8 | 860 | 10 | 0 | 1 | 860 | 121 | 980 | 0.0e+00 | 1682.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene67529 | MS.gene014188 | PPI |
| MS.gene069756 | MS.gene014188 | PPI |
| MS.gene003462 | MS.gene014188 | PPI |
| MS.gene014188 | MS.gene52129 | PPI |
| MS.gene67595 | MS.gene014188 | PPI |
| MS.gene64830 | MS.gene014188 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014188.t1 | MTR_3g118360 | 98.837 | 860 | 10 | 0 | 1 | 860 | 121 | 980 | 0.0 | 1750 |
| MS.gene014188.t1 | MTR_3g118360 | 98.667 | 750 | 10 | 0 | 1 | 750 | 121 | 870 | 0.0 | 1530 |
| MS.gene014188.t1 | MTR_3g118360 | 98.798 | 749 | 9 | 0 | 1 | 749 | 121 | 869 | 0.0 | 1528 |
| MS.gene014188.t1 | MTR_3g118360 | 98.860 | 702 | 8 | 0 | 159 | 860 | 1 | 702 | 0.0 | 1400 |
| MS.gene014188.t1 | MTR_4g074640 | 35.145 | 791 | 424 | 20 | 1 | 734 | 52 | 810 | 9.32e-134 | 423 |
| MS.gene014188.t1 | MTR_4g074670 | 37.931 | 435 | 230 | 12 | 1 | 412 | 52 | 469 | 6.81e-84 | 281 |
| MS.gene014188.t1 | MTR_4g074670 | 36.213 | 301 | 171 | 8 | 118 | 412 | 2 | 287 | 5.32e-47 | 174 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014188.t1 | AT5G22800 | 73.140 | 860 | 228 | 3 | 1 | 858 | 143 | 1001 | 0.0 | 1306 |
| MS.gene014188.t1 | AT5G22800 | 73.140 | 860 | 228 | 3 | 1 | 858 | 118 | 976 | 0.0 | 1305 |
| MS.gene014188.t1 | AT1G50200 | 36.729 | 746 | 388 | 17 | 1 | 691 | 100 | 816 | 1.47e-145 | 456 |
| MS.gene014188.t1 | AT1G50200 | 36.729 | 746 | 388 | 17 | 1 | 691 | 100 | 816 | 2.76e-145 | 455 |
Find 195 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAGCTTATCTTTGTGAAAA+AGG | 0.152053 | 3.1:+92999472 | MS.gene014188:CDS |
| GTACCTGACACTGAATTTAT+TGG | 0.154294 | 3.1:+92994066 | MS.gene014188:CDS |
| ACACTAATCCATAATCTTTC+TGG | 0.181990 | 3.1:-92992523 | None:intergenic |
| CAATTCAAACCTATCTTTCT+TGG | 0.208066 | 3.1:+92992304 | MS.gene014188:CDS |
| AATACTTTCTGAGCAATTAT+AGG | 0.215096 | 3.1:-92993667 | None:intergenic |
| ATTCAGGCAGGTAAATTTAT+TGG | 0.228211 | 3.1:+92999334 | MS.gene014188:CDS |
| TACTCCAGGGGTGGTTGGTC+AGG | 0.230750 | 3.1:+92999309 | MS.gene014188:CDS |
| GTTTGCCTCCAGAAAGATTA+TGG | 0.233077 | 3.1:+92992515 | MS.gene014188:CDS |
| AAGTCAGTTTCATAGTTATT+TGG | 0.248121 | 3.1:-92993288 | None:intergenic |
| AAGTGCCGCAGAATATTTAA+TGG | 0.255077 | 3.1:+92999210 | MS.gene014188:CDS |
| ATCCTCACAGTTACTTCTTC+AGG | 0.258382 | 3.1:-92997213 | None:intergenic |
| GACCTCTCAAGCTGGTTCTT+TGG | 0.278405 | 3.1:+92994648 | MS.gene014188:CDS |
| ATAGATGTTCAGAAGTCTTT+TGG | 0.278583 | 3.1:+92994291 | MS.gene014188:CDS |
| GGCAGGTTGCTTGGTATAAA+AGG | 0.291942 | 3.1:+92993610 | MS.gene014188:CDS |
| TCTATGTTCTTCTGCTTTAG+AGG | 0.298105 | 3.1:-92992980 | None:intergenic |
| TGGGAGGAAGCCTGAAAATT+TGG | 0.299980 | 3.1:+92999417 | MS.gene014188:CDS |
| TCCCCGTTGACCGAATTAAA+AGG | 0.301895 | 3.1:+92992682 | MS.gene014188:CDS |
| CCTCCTGATTCAGCATAAAA+TGG | 0.304165 | 3.1:-92994198 | None:intergenic |
| GCTGAATCAGGAGGACAAAT+TGG | 0.307268 | 3.1:+92994207 | MS.gene014188:CDS |
| GGTGGTTGGTCAGGGAATTC+AGG | 0.315604 | 3.1:+92999318 | MS.gene014188:CDS |
| CTACCCGTAACTCCTCTAAA+AGG | 0.316525 | 3.1:-92997242 | None:intergenic |
| GACTTATCTACCATTGAGTT+TGG | 0.319082 | 3.1:+92992493 | MS.gene014188:CDS |
| GAAGGAGCAATTGCAATGTT+TGG | 0.329419 | 3.1:+92994820 | MS.gene014188:CDS |
| AAGCAGAAGAACATAGATAC+TGG | 0.331732 | 3.1:+92992986 | MS.gene014188:CDS |
| CAACCTCTAGAACACCCTTT+TGG | 0.351759 | 3.1:-92994341 | None:intergenic |
| TAACCCCTCCCAACGTTTGA+TGG | 0.352810 | 3.1:-92993550 | None:intergenic |
| GTGATCCAGCCGTACAGGTT+AGG | 0.360098 | 3.1:+92994139 | MS.gene014188:CDS |
| CAGGATACTAGTTGAGTGTT+TGG | 0.364396 | 3.1:+92999162 | MS.gene014188:intron |
| ACTACAAGCAGCGCTTAAAA+AGG | 0.368159 | 3.1:+92994612 | MS.gene014188:CDS |
| AACAAGCTATTCAATGGGCT+TGG | 0.372665 | 3.1:+92992470 | MS.gene014188:CDS |
| TTACCTGTTGAGACCATAAC+TGG | 0.378573 | 3.1:-92992570 | None:intergenic |
| GTAGCAAGCCTAGTGGTAAA+TGG | 0.391692 | 3.1:+92994117 | MS.gene014188:CDS |
| CTTTCAGATACCTCTTTGTC+TGG | 0.392755 | 3.1:-92993374 | None:intergenic |
| GAATTAGCAAATATTTCATA+TGG | 0.402355 | 3.1:+92993339 | MS.gene014188:CDS |
| GTCAAGCTTGCCATTGGAAG+CGG | 0.403782 | 3.1:+92994024 | MS.gene014188:CDS |
| CATAGATACTGGGCTTGGTC+TGG | 0.405421 | 3.1:+92992997 | MS.gene014188:CDS |
| ATCATGAGACTTTCCAGTTA+TGG | 0.406423 | 3.1:+92992557 | MS.gene014188:CDS |
| CCCACCAGCCTGAGCGAAGT+TGG | 0.409388 | 3.1:-92999398 | None:intergenic |
| TGGTGGCATTTGATCGTCTC+AGG | 0.410015 | 3.1:+92994668 | MS.gene014188:CDS |
| GTACGTGTTGTAGAGGTTCC+TGG | 0.424531 | 3.1:+92995976 | MS.gene014188:CDS |
| ATTATCTCCACGACAGCCTT+AGG | 0.424823 | 3.1:-92994270 | None:intergenic |
| TTTCCAGTTATGGTCTCAAC+AGG | 0.427549 | 3.1:+92992567 | MS.gene014188:CDS |
| ACTCCAGGGGTGGTTGGTCA+GGG | 0.433011 | 3.1:+92999310 | MS.gene014188:CDS |
| CATACCTTCTTTGAGATGCT+TGG | 0.433272 | 3.1:+92992418 | MS.gene014188:CDS |
| TTATGTGGTGGTGGAGGAGG+TGG | 0.436304 | 3.1:+92999370 | MS.gene014188:CDS |
| TGGGTGAAGAGGATAACTTT+TGG | 0.438035 | 3.1:+92992706 | MS.gene014188:CDS |
| TCAGAGCAGGGTATTGCATC+TGG | 0.441838 | 3.1:+92996069 | MS.gene014188:CDS |
| GGAGGACAAATTGGAGATCA+TGG | 0.446126 | 3.1:+92994216 | MS.gene014188:CDS |
| CTCTCAAGCTGGTTCTTTGG+TGG | 0.451414 | 3.1:+92994651 | MS.gene014188:CDS |
| TTCAGAGGCCTTCTCTATGA+TGG | 0.452809 | 3.1:-92993319 | None:intergenic |
| AGGCGGATAGAAGCTGTAGC+TGG | 0.454459 | 3.1:+92996096 | MS.gene014188:CDS |
| ATGCTTGGTAACTTCAGCTT+TGG | 0.456959 | 3.1:+92992433 | MS.gene014188:CDS |
| ATTGTCCTGGGCTCATGTCC+AGG | 0.459686 | 3.1:+92999256 | MS.gene014188:CDS |
| TATCCAATAAATTCAGTGTC+AGG | 0.460034 | 3.1:-92994069 | None:intergenic |
| AGGGTATTGCATCTGGTGTC+AGG | 0.460775 | 3.1:+92996076 | MS.gene014188:CDS |
| CTTCAACTCCTCAAGGATAC+GGG | 0.462475 | 3.1:-92993734 | None:intergenic |
| TGATCCAGCCGTACAGGTTA+GGG | 0.465370 | 3.1:+92994140 | MS.gene014188:CDS |
| AGTAATACTTCTGAAATTCG+TGG | 0.467614 | 3.1:+92996033 | MS.gene014188:CDS |
| TCACAAGGGTACAGTCCAAA+AGG | 0.467810 | 3.1:+92994326 | MS.gene014188:CDS |
| GGAACTGTACCTTGCTTGGC+TGG | 0.471150 | 3.1:+92993850 | MS.gene014188:CDS |
| ATTCCCTGACCAACCACCCC+TGG | 0.472687 | 3.1:-92999313 | None:intergenic |
| CATGGCTCGCATTCTTCAAA+AGG | 0.478575 | 3.1:+92993024 | MS.gene014188:CDS |
| ACAAGCTATTCAATGGGCTT+GGG | 0.479029 | 3.1:+92992471 | MS.gene014188:CDS |
| GGTAGCAAGAAACGAAAATT+CGG | 0.480512 | 3.1:+92997260 | MS.gene014188:CDS |
| TCTTCAACTCCTCAAGGATA+CGG | 0.483308 | 3.1:-92993735 | None:intergenic |
| TCCAACTTCGCTCAGGCTGG+TGG | 0.485257 | 3.1:+92999397 | MS.gene014188:CDS |
| GGGTGTTGAAAGCAGGATCT+TGG | 0.487566 | 3.1:+92992881 | MS.gene014188:intron |
| AAATTATGTGGTGGTGGAGG+AGG | 0.487864 | 3.1:+92999367 | MS.gene014188:CDS |
| TTTCTGCAAGCTCGCTATCA+AGG | 0.488467 | 3.1:-92994717 | None:intergenic |
| ACATCGGCGTATCCCCTCTC+AGG | 0.490257 | 3.1:-92992786 | None:intergenic |
| GTTGACCGAATTAAAAGGTT+GGG | 0.490401 | 3.1:+92992687 | MS.gene014188:CDS |
| AGAGCAAGGACCGCAGGGAC+CGG | 0.491524 | 3.1:-92992742 | None:intergenic |
| GTTCGTACAGGCAGGTTGCT+TGG | 0.494701 | 3.1:+92993601 | MS.gene014188:CDS |
| TTGGTATAAAAGGTGATGGT+AGG | 0.500325 | 3.1:+92993620 | MS.gene014188:CDS |
| AAATGGTGATCCAGCCGTAC+AGG | 0.500392 | 3.1:+92994134 | MS.gene014188:CDS |
| ATCAGAAGAGTTGTTCGTAC+AGG | 0.503028 | 3.1:+92993589 | MS.gene014188:CDS |
| GGCGGATAGAAGCTGTAGCT+GGG | 0.506427 | 3.1:+92996097 | MS.gene014188:CDS |
| GAAGAGTTGTTCGTACAGGC+AGG | 0.512237 | 3.1:+92993593 | MS.gene014188:CDS |
| CTGGATCACCATTTACCACT+AGG | 0.515077 | 3.1:-92994125 | None:intergenic |
| TGATACTTATGGTTTCCCTA+TGG | 0.515111 | 3.1:+92993894 | MS.gene014188:CDS |
| CATTGTTGATATCATTAGTA+CGG | 0.517063 | 3.1:-92992375 | None:intergenic |
| TCAGAGGCCTTCTCTATGAT+GGG | 0.518722 | 3.1:-92993318 | None:intergenic |
| TGGTATAAAAGGTGATGGTA+GGG | 0.518928 | 3.1:+92993621 | MS.gene014188:CDS |
| GCGTTGTACCATCAAACGTT+GGG | 0.520683 | 3.1:+92993542 | MS.gene014188:CDS |
| GCAAAATTATGTGGTGGTGG+AGG | 0.520739 | 3.1:+92999364 | MS.gene014188:CDS |
| GTACCATCAAACGTTGGGAG+GGG | 0.521676 | 3.1:+92993547 | MS.gene014188:CDS |
| GTTACCAAGCATCTCAAAGA+AGG | 0.522266 | 3.1:-92992422 | None:intergenic |
| CAAAAGGGTGTTCTAGAGGT+TGG | 0.522615 | 3.1:+92994342 | MS.gene014188:CDS |
| CTCTGATTTAGCTTTCTCGA+GGG | 0.522771 | 3.1:-92999446 | None:intergenic |
| AATTTCAGAGCAAGGACCGC+AGG | 0.525249 | 3.1:-92992748 | None:intergenic |
| ATTGTGTTTCTCATCTCTGA+TGG | 0.528181 | 3.1:+92993520 | MS.gene014188:CDS |
| CCTTCCCTAACCTGTACGGC+TGG | 0.530381 | 3.1:-92994144 | None:intergenic |
| AGGTCCAACTTCGCTCAGGC+TGG | 0.530546 | 3.1:+92999394 | MS.gene014188:CDS |
| CTTCACCTGGACATGAGCCC+AGG | 0.531541 | 3.1:-92999261 | None:intergenic |
| TGGGCTTGGTCTGGAGCGCA+TGG | 0.533587 | 3.1:+92993006 | MS.gene014188:CDS |
| GCTTCGATTTGTGCAGACGC+TGG | 0.536077 | 3.1:+92993765 | MS.gene014188:CDS |
| TGGAAGGTCCAACTTCGCTC+AGG | 0.537180 | 3.1:+92999390 | MS.gene014188:CDS |
| AATACTGTCAAGCTTGCCAT+TGG | 0.538095 | 3.1:+92994018 | MS.gene014188:CDS |
| GAGCCCAGGACAATAGCTGC+TGG | 0.539000 | 3.1:-92999247 | None:intergenic |
| GGAGGGGTTATGTAGTTCGA+CGG | 0.540107 | 3.1:+92993563 | MS.gene014188:CDS |
| CGTTGACCGAATTAAAAGGT+TGG | 0.540395 | 3.1:+92992686 | MS.gene014188:CDS |
| CTGGGCTCATGTCCAGGTGA+AGG | 0.540402 | 3.1:+92999262 | MS.gene014188:CDS |
| AAGAACATAGATACTGGGCT+TGG | 0.541349 | 3.1:+92992992 | MS.gene014188:CDS |
| AGACTAACCTTCCCTTCACC+TGG | 0.541694 | 3.1:-92999274 | None:intergenic |
| GGAAAGTCTCATGATCGTCT+TGG | 0.542083 | 3.1:-92992549 | None:intergenic |
| TTTAAAGTAATTTCAGAGCA+GGG | 0.545061 | 3.1:+92996057 | MS.gene014188:CDS |
| AGATCCAGCAGCTATTGTCC+TGG | 0.546412 | 3.1:+92999243 | MS.gene014188:CDS |
| TCAAGCTTGCCATTGGAAGC+GGG | 0.546840 | 3.1:+92994025 | MS.gene014188:CDS |
| AATTAAAAGGTTGGGTGAAG+AGG | 0.549692 | 3.1:+92992695 | MS.gene014188:CDS |
| GATCCAGCAGCTATTGTCCT+GGG | 0.550834 | 3.1:+92999244 | MS.gene014188:CDS |
| AGTCAGGAGACCTCTCAAGC+TGG | 0.554855 | 3.1:+92994640 | MS.gene014188:CDS |
| GTTGGTCAGGGAATTCAGGC+AGG | 0.558788 | 3.1:+92999322 | MS.gene014188:CDS |
| CACAAGGGTACAGTCCAAAA+GGG | 0.558794 | 3.1:+92994327 | MS.gene014188:CDS |
| ATATCAAGTGCTGAAAGAAG+TGG | 0.561924 | 3.1:+92993829 | MS.gene014188:CDS |
| GTAGCACGAGGGACTTGTCT+AGG | 0.562012 | 3.1:-92992334 | None:intergenic |
| TGGAGGCAAACCAAACTCAA+TGG | 0.563536 | 3.1:-92992503 | None:intergenic |
| CCAACTTCGCTCAGGCTGGT+GGG | 0.563594 | 3.1:+92999398 | MS.gene014188:CDS |
| ACTCCCTTCCCTAACCTGTA+CGG | 0.564727 | 3.1:-92994148 | None:intergenic |
| TGGCAATATATTTGTTCACA+AGG | 0.567482 | 3.1:+92994311 | MS.gene014188:CDS |
| ATCAGCAAGAGGCATCACTT+TGG | 0.568344 | 3.1:-92994788 | None:intergenic |
| ATAGCAAAATTATGTGGTGG+TGG | 0.571171 | 3.1:+92999361 | MS.gene014188:CDS |
| TCATAATAAATTTCAGAGCA+AGG | 0.571821 | 3.1:-92992756 | None:intergenic |
| AAAGTTGAGGCAACGAGCCA+AGG | 0.572093 | 3.1:+92994392 | MS.gene014188:CDS |
| TGTACCATCAAACGTTGGGA+GGG | 0.573784 | 3.1:+92993546 | MS.gene014188:CDS |
| CACCAAAGAACCAGCTTGAG+AGG | 0.573822 | 3.1:-92994650 | None:intergenic |
| CTTCTCTCTTCAACTCCTCA+AGG | 0.574968 | 3.1:-92993741 | None:intergenic |
| TGAAATATTTGCTAATTCAG+AGG | 0.579198 | 3.1:-92993334 | None:intergenic |
| ACTAATGATATCAACAATGT+TGG | 0.579654 | 3.1:+92992379 | MS.gene014188:CDS |
| TATGGAAATAACAAAAGAAG+TGG | 0.579964 | 3.1:+92993912 | MS.gene014188:CDS |
| CTCATGTCCAGGTGAAGGGA+AGG | 0.580776 | 3.1:+92999267 | MS.gene014188:CDS |
| GTGGTGGTGGAGGAGGTGGA+AGG | 0.581825 | 3.1:+92999374 | MS.gene014188:CDS |
| TGGGCTCATGTCCAGGTGAA+GGG | 0.582195 | 3.1:+92999263 | MS.gene014188:CDS |
| AGCAGAAGAACATAGATACT+GGG | 0.583073 | 3.1:+92992987 | MS.gene014188:CDS |
| AAGTGGAACTGTACCTTGCT+TGG | 0.584929 | 3.1:+92993846 | MS.gene014188:CDS |
| AATACTTGTCCCGCTTCCAA+TGG | 0.585244 | 3.1:-92994034 | None:intergenic |
| TTGTACCATCAAACGTTGGG+AGG | 0.589872 | 3.1:+92993545 | MS.gene014188:CDS |
| GAGAGGAGAGAAATTGCTTG+AGG | 0.590060 | 3.1:+92993789 | MS.gene014188:CDS |
| GGTATAAAAGGTGATGGTAG+GGG | 0.590969 | 3.1:+92993622 | MS.gene014188:CDS |
| GGCAATATATTTGTTCACAA+GGG | 0.592455 | 3.1:+92994312 | MS.gene014188:CDS |
| TGGGGCATTCAAAACAGTAC+AGG | 0.592610 | 3.1:+92997343 | MS.gene014188:CDS |
| CAAACAAGTGGAAGCAACAG+TGG | 0.594498 | 3.1:+92994365 | MS.gene014188:CDS |
| GCTGATCAACGGATGGATTG+AGG | 0.596209 | 3.1:+92994747 | MS.gene014188:CDS |
| AGAGGTTCCTGGAGTATCGA+TGG | 0.596716 | 3.1:+92995987 | MS.gene014188:CDS |
| TTGCTTGGTATAAAAGGTGA+TGG | 0.598004 | 3.1:+92993616 | MS.gene014188:CDS |
| AGTCCAAAAGGGTGTTCTAG+AGG | 0.604342 | 3.1:+92994338 | MS.gene014188:CDS |
| AGGAAGCCTGAAAATTTGGC+TGG | 0.604884 | 3.1:+92999421 | MS.gene014188:CDS |
| TTTGTGCAGACGCTGGAGAG+AGG | 0.605643 | 3.1:+92993772 | MS.gene014188:CDS |
| TGTTTCCATTAAATATTCTG+CGG | 0.605968 | 3.1:-92999215 | None:intergenic |
| CAAAGTTCCATCGATACTCC+AGG | 0.606263 | 3.1:-92995994 | None:intergenic |
| CGCTATCAAGGAGTGGACGG+TGG | 0.606601 | 3.1:-92994705 | None:intergenic |
| AGGATCTTGGTGATGATACA+CGG | 0.607079 | 3.1:+92992894 | MS.gene014188:intron |
| GATTCTCCCCATCATAGAGA+AGG | 0.608580 | 3.1:+92993311 | MS.gene014188:CDS |
| GGACAGATAGCAAAATTATG+TGG | 0.609892 | 3.1:+92999355 | MS.gene014188:CDS |
| GCTCTGATTTAGCTTTCTCG+AGG | 0.610643 | 3.1:-92999447 | None:intergenic |
| GAAATCGAACTGCTGATCAA+CGG | 0.611385 | 3.1:+92994736 | MS.gene014188:CDS |
| CCAGCCGTACAGGTTAGGGA+AGG | 0.611758 | 3.1:+92994144 | MS.gene014188:CDS |
| TCAGGAACATACTTTGAGAG+TGG | 0.613102 | 3.1:-92996175 | None:intergenic |
| TCGAACTGCTGATCAACGGA+TGG | 0.614833 | 3.1:+92994740 | MS.gene014188:CDS |
| GAATCAACCTAAGGCTGTCG+TGG | 0.615063 | 3.1:+92994263 | MS.gene014188:CDS |
| GGCGTTGTACCATCAAACGT+TGG | 0.615289 | 3.1:+92993541 | MS.gene014188:CDS |
| ATTTCAGAGCAAGGACCGCA+GGG | 0.616018 | 3.1:-92992747 | None:intergenic |
| AGAGGGTGAGAATCAACCTA+AGG | 0.616634 | 3.1:+92994254 | MS.gene014188:CDS |
| ACTTCGCTCAGGCTGGTGGG+AGG | 0.619056 | 3.1:+92999401 | MS.gene014188:CDS |
| GGAGTATCGATGGAACTTTG+TGG | 0.622057 | 3.1:+92995997 | MS.gene014188:CDS |
| CTAATCCATAATCTTTCTGG+AGG | 0.622240 | 3.1:-92992520 | None:intergenic |
| GCTCGCTATCAAGGAGTGGA+CGG | 0.625144 | 3.1:-92994708 | None:intergenic |
| TGAAGGGAAGGTTAGTCTAG+TGG | 0.626264 | 3.1:+92999279 | MS.gene014188:CDS |
| TCTAGAGGTTGGCAAACAAG+TGG | 0.626675 | 3.1:+92994353 | MS.gene014188:CDS |
| GGTTAGGGAAGGGAGTAATG+TGG | 0.629772 | 3.1:+92994155 | MS.gene014188:CDS |
| GTGTTTGGATGATGTTGATG+CGG | 0.629997 | 3.1:+92999177 | MS.gene014188:CDS |
| GGTGTGAGTATTGACATGAA+TGG | 0.634865 | 3.1:+92993946 | MS.gene014188:CDS |
| TATCATACTACTTACAACAT+CGG | 0.636211 | 3.1:-92992802 | None:intergenic |
| GCAAGCTCGCTATCAAGGAG+TGG | 0.639731 | 3.1:-92994712 | None:intergenic |
| CGTTGTGAAGTAGTAGCACG+AGG | 0.644204 | 3.1:-92992346 | None:intergenic |
| GATGGTAGGGGAGACCCTGA+AGG | 0.644605 | 3.1:+92993634 | MS.gene014188:CDS |
| ACTGCAGGTACGTGTTGTAG+AGG | 0.644859 | 3.1:+92995969 | MS.gene014188:intron |
| TATCGATGGAACTTTGTGGT+GGG | 0.645529 | 3.1:+92996001 | MS.gene014188:CDS |
| CAGCCGTACAGGTTAGGGAA+GGG | 0.646194 | 3.1:+92994145 | MS.gene014188:CDS |
| AGCGGAGTCACCGGTCCCTG+CGG | 0.646446 | 3.1:+92992732 | MS.gene014188:CDS |
| TAGAGCACCCCGTATCCTTG+AGG | 0.648075 | 3.1:+92993726 | MS.gene014188:CDS |
| TGCTTGTAGTAAATGAGTAG+CGG | 0.651476 | 3.1:-92994599 | None:intergenic |
| CAACAGTGGATGTAAAGTTG+AGG | 0.654944 | 3.1:+92994379 | MS.gene014188:CDS |
| CAGAGGCCTTCTCTATGATG+GGG | 0.657776 | 3.1:-92993317 | None:intergenic |
| GCGGATAGAAGCTGTAGCTG+GGG | 0.661208 | 3.1:+92996098 | MS.gene014188:CDS |
| TATCTGATGACCAGACAAAG+AGG | 0.661772 | 3.1:+92993364 | MS.gene014188:CDS |
| TTCAACTCCTCAAGGATACG+GGG | 0.663705 | 3.1:-92993733 | None:intergenic |
| AAAGAAGGTATGATGACGTG+AGG | 0.668436 | 3.1:-92992407 | None:intergenic |
| GTATTGCATCTGGTGTCAGG+CGG | 0.681197 | 3.1:+92996079 | MS.gene014188:CDS |
| ACATCTTCACCAGCCAAGCA+AGG | 0.684496 | 3.1:-92993859 | None:intergenic |
| AGCAATTGTAGCAAGCCTAG+TGG | 0.687149 | 3.1:+92994110 | MS.gene014188:CDS |
| AAAGAAGTGGCTGAAGAACG+CGG | 0.692053 | 3.1:+92993925 | MS.gene014188:CDS |
| GTATCGATGGAACTTTGTGG+TGG | 0.704292 | 3.1:+92996000 | MS.gene014188:CDS |
| AACCTGAAGAAGTAACTGTG+AGG | 0.719116 | 3.1:+92997211 | MS.gene014188:CDS |
| CAGATAGCAAAATTATGTGG+TGG | 0.721808 | 3.1:+92999358 | MS.gene014188:CDS |
| GTTGTGAAGTAGTAGCACGA+GGG | 0.763537 | 3.1:-92992345 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 92992298 | 92999501 | 92992298 | ID=MS.gene014188 |
| chr3.1 | mRNA | 92992298 | 92999501 | 92992298 | ID=MS.gene014188.t1;Parent=MS.gene014188 |
| chr3.1 | exon | 92992298 | 92992588 | 92992298 | ID=MS.gene014188.t1.exon1;Parent=MS.gene014188.t1 |
| chr3.1 | CDS | 92992298 | 92992588 | 92992298 | ID=cds.MS.gene014188.t1;Parent=MS.gene014188.t1 |
| chr3.1 | exon | 92992675 | 92992809 | 92992675 | ID=MS.gene014188.t1.exon2;Parent=MS.gene014188.t1 |
| chr3.1 | CDS | 92992675 | 92992809 | 92992675 | ID=cds.MS.gene014188.t1;Parent=MS.gene014188.t1 |
| chr3.1 | exon | 92992896 | 92993045 | 92992896 | ID=MS.gene014188.t1.exon3;Parent=MS.gene014188.t1 |
| chr3.1 | CDS | 92992896 | 92993045 | 92992896 | ID=cds.MS.gene014188.t1;Parent=MS.gene014188.t1 |
| chr3.1 | exon | 92993285 | 92993395 | 92993285 | ID=MS.gene014188.t1.exon4;Parent=MS.gene014188.t1 |
| chr3.1 | CDS | 92993285 | 92993395 | 92993285 | ID=cds.MS.gene014188.t1;Parent=MS.gene014188.t1 |
| chr3.1 | exon | 92993496 | 92994413 | 92993496 | ID=MS.gene014188.t1.exon5;Parent=MS.gene014188.t1 |
| chr3.1 | CDS | 92993496 | 92994413 | 92993496 | ID=cds.MS.gene014188.t1;Parent=MS.gene014188.t1 |
| chr3.1 | exon | 92994589 | 92994861 | 92994589 | ID=MS.gene014188.t1.exon6;Parent=MS.gene014188.t1 |
| chr3.1 | CDS | 92994589 | 92994861 | 92994589 | ID=cds.MS.gene014188.t1;Parent=MS.gene014188.t1 |
| chr3.1 | exon | 92995976 | 92996185 | 92995976 | ID=MS.gene014188.t1.exon7;Parent=MS.gene014188.t1 |
| chr3.1 | CDS | 92995976 | 92996185 | 92995976 | ID=cds.MS.gene014188.t1;Parent=MS.gene014188.t1 |
| chr3.1 | exon | 92997207 | 92997364 | 92997207 | ID=MS.gene014188.t1.exon8;Parent=MS.gene014188.t1 |
| chr3.1 | CDS | 92997207 | 92997364 | 92997207 | ID=cds.MS.gene014188.t1;Parent=MS.gene014188.t1 |
| chr3.1 | exon | 92999165 | 92999501 | 92999165 | ID=MS.gene014188.t1.exon9;Parent=MS.gene014188.t1 |
| chr3.1 | CDS | 92999165 | 92999501 | 92999165 | ID=cds.MS.gene014188.t1;Parent=MS.gene014188.t1 |
| Gene Sequence |
| Protein sequence |
