Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014835.t1 | AFK45470.1 | 81.6 | 467 | 69 | 4 | 1 | 465 | 1 | 452 | 6.00E-161 | 577.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014835.t1 | Q94C48 | 49.2 | 256 | 119 | 7 | 112 | 362 | 97 | 346 | 6.9e-49 | 196.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014835.t1 | I3SYX8 | 81.6 | 467 | 69 | 4 | 1 | 465 | 1 | 452 | 4.3e-161 | 577.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene014835 | MS.gene33200 | PPI |
| MS.gene014835 | MS.gene015987 | PPI |
| MS.gene61699 | MS.gene014835 | PPI |
| MS.gene014835 | MS.gene072889 | PPI |
| MS.gene67065 | MS.gene014835 | PPI |
| MS.gene014835 | MS.gene61699 | PPI |
| MS.gene014835 | MS.gene60284 | PPI |
| MS.gene014835 | MS.gene32634 | PPI |
| MS.gene014835 | MS.gene67065 | PPI |
| MS.gene015987 | MS.gene014835 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014835.t1 | MTR_3g107050 | 86.966 | 468 | 43 | 4 | 1 | 465 | 1 | 453 | 0.0 | 790 |
| MS.gene014835.t1 | MTR_1g012530 | 50.105 | 477 | 201 | 12 | 1 | 463 | 2 | 455 | 1.56e-128 | 380 |
| MS.gene014835.t1 | MTR_1g012530 | 50.809 | 309 | 134 | 8 | 1 | 298 | 2 | 303 | 4.73e-85 | 265 |
| MS.gene014835.t1 | MTR_1g055085 | 44.554 | 202 | 84 | 5 | 222 | 419 | 233 | 410 | 7.41e-38 | 144 |
| MS.gene014835.t1 | MTR_7g106750 | 40.455 | 220 | 102 | 5 | 104 | 314 | 130 | 329 | 1.13e-35 | 137 |
| MS.gene014835.t1 | MTR_1g075310 | 60.870 | 92 | 36 | 0 | 224 | 315 | 217 | 308 | 1.18e-28 | 117 |
| MS.gene014835.t1 | MTR_1g080690 | 52.688 | 93 | 40 | 1 | 216 | 308 | 191 | 279 | 3.26e-21 | 95.5 |
| MS.gene014835.t1 | MTR_7g115310 | 56.566 | 99 | 39 | 1 | 215 | 313 | 207 | 301 | 3.44e-20 | 94.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014835.t1 | AT4G32330 | 46.479 | 284 | 140 | 7 | 83 | 362 | 70 | 345 | 2.22e-66 | 219 |
| MS.gene014835.t1 | AT4G32330 | 46.667 | 285 | 139 | 8 | 83 | 362 | 70 | 346 | 3.60e-65 | 216 |
| MS.gene014835.t1 | AT4G32330 | 46.667 | 285 | 139 | 8 | 83 | 362 | 70 | 346 | 3.60e-65 | 216 |
| MS.gene014835.t1 | AT4G32330 | 46.667 | 285 | 139 | 8 | 83 | 362 | 70 | 346 | 3.60e-65 | 216 |
| MS.gene014835.t1 | AT2G25480 | 45.267 | 243 | 129 | 3 | 137 | 378 | 99 | 338 | 1.36e-56 | 193 |
| MS.gene014835.t1 | AT2G25480 | 45.267 | 243 | 130 | 3 | 137 | 378 | 99 | 339 | 1.45e-56 | 193 |
| MS.gene014835.t1 | AT2G35880 | 72.816 | 103 | 27 | 1 | 213 | 315 | 236 | 337 | 7.06e-42 | 154 |
| MS.gene014835.t1 | AT2G35880 | 72.816 | 103 | 27 | 1 | 213 | 315 | 236 | 337 | 7.06e-42 | 154 |
| MS.gene014835.t1 | AT2G35880 | 72.816 | 103 | 27 | 1 | 213 | 315 | 236 | 337 | 7.06e-42 | 154 |
| MS.gene014835.t1 | AT3G23090 | 54.902 | 102 | 46 | 0 | 210 | 311 | 181 | 282 | 2.13e-25 | 107 |
| MS.gene014835.t1 | AT3G23090 | 54.902 | 102 | 46 | 0 | 210 | 311 | 182 | 283 | 2.20e-25 | 107 |
| MS.gene014835.t1 | AT3G23090 | 54.902 | 102 | 46 | 0 | 210 | 311 | 217 | 318 | 4.42e-25 | 106 |
| MS.gene014835.t1 | AT3G23090 | 52.830 | 106 | 46 | 1 | 210 | 311 | 181 | 286 | 1.95e-24 | 104 |
| MS.gene014835.t1 | AT3G23090 | 50.442 | 113 | 52 | 1 | 203 | 311 | 210 | 322 | 3.37e-24 | 104 |
| MS.gene014835.t1 | AT3G04630 | 52.747 | 91 | 41 | 1 | 220 | 308 | 122 | 212 | 1.44e-22 | 97.8 |
| MS.gene014835.t1 | AT3G04630 | 52.747 | 91 | 41 | 1 | 220 | 308 | 126 | 216 | 1.45e-22 | 97.8 |
| MS.gene014835.t1 | AT3G04630 | 52.747 | 91 | 41 | 1 | 220 | 308 | 121 | 211 | 1.50e-22 | 97.8 |
| MS.gene014835.t1 | AT5G28646 | 47.899 | 119 | 54 | 3 | 216 | 330 | 84 | 198 | 1.60e-22 | 95.5 |
| MS.gene014835.t1 | AT5G28646 | 47.899 | 119 | 54 | 3 | 216 | 330 | 84 | 198 | 1.60e-22 | 95.5 |
| MS.gene014835.t1 | AT5G28646 | 47.899 | 119 | 54 | 3 | 216 | 330 | 80 | 194 | 1.62e-22 | 95.5 |
| MS.gene014835.t1 | AT1G70950 | 69.841 | 63 | 19 | 0 | 223 | 285 | 328 | 390 | 2.09e-22 | 100 |
| MS.gene014835.t1 | AT1G54460 | 47.863 | 117 | 56 | 2 | 200 | 315 | 145 | 257 | 6.75e-22 | 97.1 |
Find 92 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCTTCTTTGTGGTTTCTT+TGG | 0.174074 | 3.3:-87782941 | None:intergenic |
| TTGGATGAACTGATCCTTTC+AGG | 0.194545 | 3.3:-87782983 | None:intergenic |
| AGACAAACCACAACTCATTT+TGG | 0.224152 | 3.3:+87783237 | MS.gene014835:CDS |
| GCCTCTTAATCTCAGCTTCT+TGG | 0.237763 | 3.3:-87781396 | None:intergenic |
| TGTGGTTTCTTTGGCTGAAC+AGG | 0.290210 | 3.3:-87782932 | None:intergenic |
| GAACCCCTTGATAATCTTCC+AGG | 0.318461 | 3.3:+87780515 | MS.gene014835:CDS |
| ATGGAAGAACAAGGATTAAA+TGG | 0.328736 | 3.3:+87779812 | MS.gene014835:CDS |
| ACCAGGAGCCTACTCCTTCT+AGG | 0.337669 | 3.3:+87781464 | MS.gene014835:CDS |
| AATTGAGAATCTGCTACATT+TGG | 0.338658 | 3.3:-87783193 | None:intergenic |
| TGCTTAATGCTAACCTGCTA+TGG | 0.340425 | 3.3:-87783269 | None:intergenic |
| GAACAAACACTACACCAAAA+TGG | 0.342296 | 3.3:+87779668 | MS.gene014835:CDS |
| GTTGGGACAATGCCAACTTA+TGG | 0.342732 | 3.3:+87781072 | MS.gene014835:CDS |
| TATCAATGATAATTTGTCTA+TGG | 0.352840 | 3.3:+87779793 | MS.gene014835:CDS |
| AGTTGAAATCGTTGATGAAA+TGG | 0.373626 | 3.3:+87779965 | MS.gene014835:CDS |
| AAACAAACTGTACTGTCTAA+TGG | 0.379734 | 3.3:+87779767 | MS.gene014835:CDS |
| TTGACTGCCCTGTTCTTAAC+CGG | 0.385934 | 3.3:-87780167 | None:intergenic |
| TTCTTCAACTCCACCCTAGA+AGG | 0.399718 | 3.3:-87781478 | None:intergenic |
| GTTGTTTATGAACACCATTT+TGG | 0.402579 | 3.3:-87779682 | None:intergenic |
| CAAGACAGCCGGTTAAGAAC+AGG | 0.404848 | 3.3:+87780159 | MS.gene014835:CDS |
| ACAACTGTTTAATTCTGAAC+AGG | 0.406067 | 3.3:+87779703 | MS.gene014835:CDS |
| AGTCCGTGCAGTTGCTGAAT+TGG | 0.411034 | 3.3:-87783002 | None:intergenic |
| TGAAGCAGCTGCAGCTATTG+AGG | 0.421562 | 3.3:+87783117 | MS.gene014835:CDS |
| AAGCTGAGATTAAGAGGCTT+AGG | 0.421580 | 3.3:+87781401 | MS.gene014835:CDS |
| CTGTTCTTAACCGGCTGTCT+TGG | 0.423898 | 3.3:-87780158 | None:intergenic |
| AACTGCACGGACTTCATCTA+AGG | 0.429060 | 3.3:+87783012 | MS.gene014835:CDS |
| GCCAAGAAGCTGAGATTAAG+AGG | 0.429568 | 3.3:+87781395 | MS.gene014835:CDS |
| CTTTCTCGTCAAGACTTAAA+CGG | 0.434414 | 3.3:-87782877 | None:intergenic |
| TTCAGTTGTTACACTAGATA+AGG | 0.435015 | 3.3:-87783056 | None:intergenic |
| TGTCCCAACTCTACGAGGTT+TGG | 0.442849 | 3.3:-87781058 | None:intergenic |
| TTTCTCTTCCCTTGTTGCAA+TGG | 0.452310 | 3.3:-87783092 | None:intergenic |
| TTGATGAAATGGAGAAATCT+AGG | 0.454744 | 3.3:+87779976 | MS.gene014835:CDS |
| GCTTAATGCTAACCTGCTAT+GGG | 0.459429 | 3.3:-87783268 | None:intergenic |
| TTATGAAGACCTCGAGGACT+TGG | 0.461387 | 3.3:-87780038 | None:intergenic |
| AGGATTAAATGGCAAAATAG+AGG | 0.462425 | 3.3:+87779823 | MS.gene014835:CDS |
| TTCTAGGGTGGAGTTGAAGA+AGG | 0.474966 | 3.3:+87781480 | MS.gene014835:CDS |
| ACTCTTCTTACGACCAAGCT+TGG | 0.479893 | 3.3:-87782801 | None:intergenic |
| GGATTCAGTTAACACTTCAC+TGG | 0.481211 | 3.3:+87779631 | MS.gene014835:CDS |
| CTCTTCTTACGACCAAGCTT+GGG | 0.483203 | 3.3:-87782800 | None:intergenic |
| GGAGGGAGAAATCTTCTTTG+TGG | 0.486194 | 3.3:-87782950 | None:intergenic |
| ATGCCAAACCTCGTAGAGTT+GGG | 0.490023 | 3.3:+87781055 | MS.gene014835:CDS |
| AACAGGACTAATTCCTTTAG+TGG | 0.490237 | 3.3:-87782915 | None:intergenic |
| TTCCCTTGTTGCAATGGACA+AGG | 0.498349 | 3.3:-87783086 | None:intergenic |
| CCAGGAGCCTACTCCTTCTA+GGG | 0.502058 | 3.3:+87781465 | MS.gene014835:CDS |
| GGTTTGGCATCTTCTGATGT+AGG | 0.503553 | 3.3:-87781042 | None:intergenic |
| ACAGGACTAATTCCTTTAGT+GGG | 0.503726 | 3.3:-87782914 | None:intergenic |
| TTGAAACTGAATCCATAAGT+TGG | 0.507092 | 3.3:-87781084 | None:intergenic |
| TTTGGCTCTATGTTCTGAGA+TGG | 0.513052 | 3.3:-87783175 | None:intergenic |
| GATGCCAAACCTCGTAGAGT+TGG | 0.513113 | 3.3:+87781054 | MS.gene014835:CDS |
| TCCTGGTAGAAGCTTGGCAT+TGG | 0.514744 | 3.3:-87781448 | None:intergenic |
| GTAGCAGATTCTCAATTGAA+TGG | 0.515558 | 3.3:+87783199 | MS.gene014835:CDS |
| TCTCAGAATAACCCCACTAA+AGG | 0.516819 | 3.3:+87782902 | MS.gene014835:CDS |
| TCCAATGCCAAGCTTCTACC+AGG | 0.517321 | 3.3:+87781447 | MS.gene014835:CDS |
| CCCTAGAAGGAGTAGGCTCC+TGG | 0.521015 | 3.3:-87781465 | None:intergenic |
| AAGGATTCATGCGAAGGAAG+TGG | 0.521232 | 3.3:+87781257 | MS.gene014835:CDS |
| CACCTTGTCCATTGCAACAA+GGG | 0.541747 | 3.3:+87783084 | MS.gene014835:CDS |
| GCGAGCTGAGAGAAGAAAAG+AGG | 0.553578 | 3.3:+87781116 | MS.gene014835:CDS |
| AGAGCAAAATCTCCCAAGCT+TGG | 0.555915 | 3.3:+87782788 | MS.gene014835:CDS |
| GTAGGCTCCTGGTAGAAGCT+TGG | 0.558222 | 3.3:-87781454 | None:intergenic |
| AGACTCTCATCCAAGACAGC+CGG | 0.559968 | 3.3:+87780148 | MS.gene014835:CDS |
| AACACTTCACTGGAAGATGA+TGG | 0.565636 | 3.3:+87779641 | MS.gene014835:CDS |
| CCACCTTGTCCATTGCAACA+AGG | 0.567508 | 3.3:+87783083 | MS.gene014835:CDS |
| TTTCAGGAGTTAGTCGAGGA+GGG | 0.575136 | 3.3:-87782967 | None:intergenic |
| GGTTCTTTCTTTATTAAGCG+TGG | 0.580191 | 3.3:-87780497 | None:intergenic |
| GGATTAAATGGCAAAATAGA+GGG | 0.583012 | 3.3:+87779824 | MS.gene014835:CDS |
| CAACGACGGAAAAGATGAAG+AGG | 0.583882 | 3.3:+87780085 | MS.gene014835:CDS |
| CAAGCAGACTCGACATTCCA+AGG | 0.585070 | 3.3:+87780193 | MS.gene014835:CDS |
| TTTACTCTAAGCTTGAGGAA+AGG | 0.592432 | 3.3:+87781238 | MS.gene014835:CDS |
| CTTTCAGGAGTTAGTCGAGG+AGG | 0.594414 | 3.3:-87782968 | None:intergenic |
| AGTTGTTACACTAGATAAGG+AGG | 0.597207 | 3.3:-87783053 | None:intergenic |
| TGAGGAAAGGATTCATGCGA+AGG | 0.601101 | 3.3:+87781251 | MS.gene014835:CDS |
| TCTTCATAATCATATGACTT+CGG | 0.602213 | 3.3:+87780052 | MS.gene014835:CDS |
| CAGGACTAATTCCTTTAGTG+GGG | 0.608696 | 3.3:-87782913 | None:intergenic |
| TCTTGGATGAGAGTCTAAAG+TGG | 0.610280 | 3.3:-87780141 | None:intergenic |
| CATTGGTGCTTCAGTAGATG+CGG | 0.618377 | 3.3:-87780371 | None:intergenic |
| ATCCTTTCAGGAGTTAGTCG+AGG | 0.619097 | 3.3:-87782971 | None:intergenic |
| AAGACAGCCGGTTAAGAACA+GGG | 0.621749 | 3.3:+87780160 | MS.gene014835:CDS |
| GATTCATGCGAAGGAAGTGG+AGG | 0.623695 | 3.3:+87781260 | MS.gene014835:CDS |
| CTGTTTAATTCTGAACAGGA+TGG | 0.623702 | 3.3:+87779707 | MS.gene014835:CDS |
| CTCCTCGACTAACTCCTGAA+AGG | 0.628008 | 3.3:+87782969 | MS.gene014835:CDS |
| AACTCCACCCTAGAAGGAGT+AGG | 0.629124 | 3.3:-87781472 | None:intergenic |
| CATCCAATTCAGCAACTGCA+CGG | 0.641669 | 3.3:+87782999 | MS.gene014835:CDS |
| GCCTTGTCTGATGAGACAAG+TGG | 0.643159 | 3.3:+87783148 | MS.gene014835:CDS |
| TCAAAATTGCCAAGTCCTCG+AGG | 0.647496 | 3.3:+87780029 | MS.gene014835:CDS |
| TCCACTTGTCTCATCAGACA+AGG | 0.648448 | 3.3:-87783149 | None:intergenic |
| GGAGCCTACTCCTTCTAGGG+TGG | 0.650646 | 3.3:+87781468 | MS.gene014835:CDS |
| GGCATTGTCCCAACTCTACG+AGG | 0.655109 | 3.3:-87781063 | None:intergenic |
| CCTTGTTGCAATGGACAAGG+TGG | 0.666267 | 3.3:-87783083 | None:intergenic |
| TGCACGGACTTCATCTAAGG+CGG | 0.675302 | 3.3:+87783015 | MS.gene014835:CDS |
| TTTCCTGGAAGATTATCAAG+GGG | 0.677776 | 3.3:-87780518 | None:intergenic |
| AATTTGTCTATGGAAGAACA+AGG | 0.717987 | 3.3:+87779803 | MS.gene014835:CDS |
| TCGGTGAGAAAGAACAACGA+CGG | 0.718750 | 3.3:+87780071 | MS.gene014835:CDS |
| ATATGATTATGAAGACCTCG+AGG | 0.733811 | 3.3:-87780044 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAATAAAAACAATAAAAAA+AGG | - | chr3.3:87780563-87780582 | None:intergenic | 10.0% |
| !!! | TGTATTTTTGAAATTATTAT+AGG | + | chr3.3:87779935-87779954 | MS.gene014835:intron | 10.0% |
| !!! | TTTAAAAAAAGTTCATATTT+TGG | + | chr3.3:87781207-87781226 | MS.gene014835:intron | 10.0% |
| !! | AATAATTTCAAAAATACATG+AGG | - | chr3.3:87779933-87779952 | None:intergenic | 15.0% |
| !! | AGATCAATAATATAATATGA+AGG | - | chr3.3:87782558-87782577 | None:intergenic | 15.0% |
| !! | GAGAAAATGTAAAAAAATAA+AGG | - | chr3.3:87780328-87780347 | None:intergenic | 15.0% |
| !! | TATAATGTAGTTTACAATTA+TGG | + | chr3.3:87780987-87781006 | MS.gene014835:intron | 15.0% |
| !! | TATTGAATATCCAATATATA+TGG | - | chr3.3:87781968-87781987 | None:intergenic | 15.0% |
| !!! | AAATTTTATTGAAAGAAAAC+CGG | - | chr3.3:87782612-87782631 | None:intergenic | 15.0% |
| !!! | AATTTTTAAAATTAGAGAGA+AGG | + | chr3.3:87780901-87780920 | MS.gene014835:intron | 15.0% |
| !!! | ATTTTTAAAATTAGAGAGAA+GGG | + | chr3.3:87780902-87780921 | MS.gene014835:intron | 15.0% |
| !! | AACTATGATTTCAATTTGAA+TGG | + | chr3.3:87781987-87782006 | MS.gene014835:intron | 20.0% |
| !! | AGTTTACAATTATGGTTTAA+TGG | + | chr3.3:87780995-87781014 | MS.gene014835:intron | 20.0% |
| !! | ATATCACAATAGTAAGTTTA+TGG | + | chr3.3:87780623-87780642 | MS.gene014835:intron | 20.0% |
| !! | ATTGCTGTATAAATACAATT+GGG | - | chr3.3:87782420-87782439 | None:intergenic | 20.0% |
| !! | CTCCTATAAAAATAAATCAA+AGG | - | chr3.3:87781374-87781393 | None:intergenic | 20.0% |
| !! | TAATTTGAACAAACATTGTA+GGG | - | chr3.3:87780835-87780854 | None:intergenic | 20.0% |
| !! | TATCACAATAGTAAGTTTAT+GGG | + | chr3.3:87780624-87780643 | MS.gene014835:intron | 20.0% |
| !! | TTTCTGTTTATGTACATATA+GGG | + | chr3.3:87781507-87781526 | MS.gene014835:intron | 20.0% |
| !!! | AAACAATGTTAATGTTTTCA+AGG | + | chr3.3:87779847-87779866 | MS.gene014835:CDS | 20.0% |
| !!! | AATTTTATTGAAAGAAAACC+GGG | - | chr3.3:87782611-87782630 | None:intergenic | 20.0% |
| !!! | ATGAGATTTTATATAATGAG+TGG | - | chr3.3:87781831-87781850 | None:intergenic | 20.0% |
| !!! | CACCTTTGATTTATTTTTAT+AGG | + | chr3.3:87781369-87781388 | MS.gene014835:intron | 20.0% |
| !!! | GTAATCTGTCTAATTATTTT+CGG | + | chr3.3:87781567-87781586 | MS.gene014835:intron | 20.0% |
| !!! | TATCAATGATAATTTGTCTA+TGG | + | chr3.3:87779793-87779812 | MS.gene014835:CDS | 20.0% |
| !!! | TATCTGATTCTAAAAATGAA+TGG | + | chr3.3:87782149-87782168 | MS.gene014835:intron | 20.0% |
| !!! | TTAATTTGAACAAACATTGT+AGG | - | chr3.3:87780836-87780855 | None:intergenic | 20.0% |
| !!! | TTAGATTTCAAAATTTGTTC+AGG | - | chr3.3:87782505-87782524 | None:intergenic | 20.0% |
| !!! | TTTGAAATTATTATAGGATG+AGG | + | chr3.3:87779941-87779960 | MS.gene014835:intron | 20.0% |
| !!! | TTTTCGGTATTTTTAACTAT+AGG | + | chr3.3:87781583-87781602 | MS.gene014835:intron | 20.0% |
| ! | AAAACTACAAGCTTATTCAA+AGG | - | chr3.3:87781190-87781209 | None:intergenic | 25.0% |
| ! | AAATATCATTCAAGCATCTA+AGG | - | chr3.3:87780663-87780682 | None:intergenic | 25.0% |
| ! | AATATCATTCAAGCATCTAA+GGG | - | chr3.3:87780662-87780681 | None:intergenic | 25.0% |
| ! | AGTTAATGGAATGTTTATTG+TGG | + | chr3.3:87781893-87781912 | MS.gene014835:intron | 25.0% |
| ! | ATGCAAATTGTTACATACAT+TGG | - | chr3.3:87780391-87780410 | None:intergenic | 25.0% |
| ! | ATTGCAACTTATTGAATACA+GGG | + | chr3.3:87780463-87780482 | MS.gene014835:intron | 25.0% |
| ! | CAAAATACTGCCATATATAT+TGG | + | chr3.3:87781955-87781974 | MS.gene014835:intron | 25.0% |
| ! | GATTGCTGTATAAATACAAT+TGG | - | chr3.3:87782421-87782440 | None:intergenic | 25.0% |
| ! | GTAAAAAACAAAGTTTACCT+TGG | - | chr3.3:87780213-87780232 | None:intergenic | 25.0% |
| ! | GTTTCTGTTTATGTACATAT+AGG | + | chr3.3:87781506-87781525 | MS.gene014835:intron | 25.0% |
| ! | TCTTCATAATCATATGACTT+CGG | + | chr3.3:87780052-87780071 | MS.gene014835:CDS | 25.0% |
| ! | TTAACTCAATAAGCTTCTTA+GGG | + | chr3.3:87780726-87780745 | MS.gene014835:intron | 25.0% |
| ! | TTGCTGTATAAATACAATTG+GGG | - | chr3.3:87782419-87782438 | None:intergenic | 25.0% |
| ! | TTTAACTCAATAAGCTTCTT+AGG | + | chr3.3:87780725-87780744 | MS.gene014835:intron | 25.0% |
| !! | AGTTTCTTCTTTAACCTTTT+TGG | + | chr3.3:87780272-87780291 | MS.gene014835:intron | 25.0% |
| !! | ATAGGCAATGTATTTTCTAT+TGG | + | chr3.3:87781601-87781620 | MS.gene014835:intron | 25.0% |
| !! | GATATTTAAAGTTAGCTAGT+TGG | + | chr3.3:87782332-87782351 | MS.gene014835:intron | 25.0% |
| !! | TTTTCATTACAGAACCAAAA+AGG | - | chr3.3:87780289-87780308 | None:intergenic | 25.0% |
| !!! | ACACCAGTTGATATTTTTAT+GGG | + | chr3.3:87782530-87782549 | MS.gene014835:intron | 25.0% |
| !!! | TACACCAGTTGATATTTTTA+TGG | + | chr3.3:87782529-87782548 | MS.gene014835:intron | 25.0% |
| !!! | TAGGACTTATAAATGGATTA+AGG | - | chr3.3:87781026-87781045 | None:intergenic | 25.0% |
| AAACAAACTGTACTGTCTAA+TGG | + | chr3.3:87779767-87779786 | MS.gene014835:CDS | 30.0% | |
| AAAGGTTAAAGAAGAAACTG+AGG | - | chr3.3:87780271-87780290 | None:intergenic | 30.0% | |
| AATAAATCAAAGGTGAGATG+TGG | - | chr3.3:87781364-87781383 | None:intergenic | 30.0% | |
| AATCAAATGTCTTGCTTGTT+CGG | + | chr3.3:87781775-87781794 | MS.gene014835:intron | 30.0% | |
| AATCTTCTTTGTGGTTTCTT+TGG | - | chr3.3:87782944-87782963 | None:intergenic | 30.0% | |
| AATTGAAATCCTTGAGCATT+TGG | + | chr3.3:87782739-87782758 | MS.gene014835:intron | 30.0% | |
| AATTGAGAATCTGCTACATT+TGG | - | chr3.3:87783196-87783215 | None:intergenic | 30.0% | |
| AATTTGTCTATGGAAGAACA+AGG | + | chr3.3:87779803-87779822 | MS.gene014835:CDS | 30.0% | |
| ACAACTGTTTAATTCTGAAC+AGG | + | chr3.3:87779703-87779722 | MS.gene014835:CDS | 30.0% | |
| AGGATTAAATGGCAAAATAG+AGG | + | chr3.3:87779823-87779842 | MS.gene014835:CDS | 30.0% | |
| AGGTCATCTATAAAATGACA+AGG | + | chr3.3:87780796-87780815 | MS.gene014835:intron | 30.0% | |
| ATGGAAGAACAAGGATTAAA+TGG | + | chr3.3:87779812-87779831 | MS.gene014835:CDS | 30.0% | |
| ATTCCATGGTTAAGAATGAT+AGG | + | chr3.3:87781802-87781821 | MS.gene014835:intron | 30.0% | |
| ATTGTAATTGCTCAAGAACT+TGG | + | chr3.3:87782478-87782497 | MS.gene014835:intron | 30.0% | |
| CCACACATCAAATAATAAAG+AGG | - | chr3.3:87780443-87780462 | None:intergenic | 30.0% | |
| CCTCTTTATTATTTGATGTG+TGG | + | chr3.3:87780440-87780459 | MS.gene014835:intron | 30.0% | |
| CTTTAAATATCTCCTCTAAC+TGG | - | chr3.3:87782323-87782342 | None:intergenic | 30.0% | |
| GATTGCAACTTATTGAATAC+AGG | + | chr3.3:87780462-87780481 | MS.gene014835:intron | 30.0% | |
| GCTATCATATATTATCACCT+TGG | - | chr3.3:87781307-87781326 | None:intergenic | 30.0% | |
| GGATTAAATGGCAAAATAGA+GGG | + | chr3.3:87779824-87779843 | MS.gene014835:CDS | 30.0% | |
| GGTGATAATATATGATAGCT+AGG | + | chr3.3:87781308-87781327 | MS.gene014835:intron | 30.0% | |
| TCTGATGTAGGACTTATAAA+TGG | - | chr3.3:87781033-87781052 | None:intergenic | 30.0% | |
| TGCTAACTCAAAAAAGTTCA+TGG | - | chr3.3:87782700-87782719 | None:intergenic | 30.0% | |
| TTATTCTTCTTACTTGTGAG+TGG | + | chr3.3:87780576-87780595 | MS.gene014835:intron | 30.0% | |
| TTCAGTTGTTACACTAGATA+AGG | - | chr3.3:87783059-87783078 | None:intergenic | 30.0% | |
| TTCCACTTCATTCTATCAAT+TGG | + | chr3.3:87781743-87781762 | MS.gene014835:intron | 30.0% | |
| TTGAAACTGAATCCATAAGT+TGG | - | chr3.3:87781087-87781106 | None:intergenic | 30.0% | |
| TTGATGAAATGGAGAAATCT+AGG | + | chr3.3:87779976-87779995 | MS.gene014835:CDS | 30.0% | |
| TTGTAATTGCTCAAGAACTT+GGG | + | chr3.3:87782479-87782498 | MS.gene014835:intron | 30.0% | |
| ! | AGATGACTTTTCACTTATCT+AGG | + | chr3.3:87782190-87782209 | MS.gene014835:intron | 30.0% |
| ! | AGTTGAAATCGTTGATGAAA+TGG | + | chr3.3:87779965-87779984 | MS.gene014835:CDS | 30.0% |
| ! | GTTGTTTATGAACACCATTT+TGG | - | chr3.3:87779685-87779704 | None:intergenic | 30.0% |
| ! | TGCTGTTTAAACTTGTCATT+AGG | + | chr3.3:87782644-87782663 | MS.gene014835:intron | 30.0% |
| ! | TGCTTGAATGATATTTTCTG+TGG | + | chr3.3:87780667-87780686 | MS.gene014835:intron | 30.0% |
| ! | TTTTCCTGGAAGATTATCAA+GGG | - | chr3.3:87780522-87780541 | None:intergenic | 30.0% |
| ! | TTTTGTACCAAAATGAGTTG+TGG | - | chr3.3:87783247-87783266 | None:intergenic | 30.0% |
| !!! | CATTTTGATTAGATCTGCAT+AGG | - | chr3.3:87782443-87782462 | None:intergenic | 30.0% |
| !!! | GTAAACTTTGTTTTTTACCC+AGG | + | chr3.3:87780215-87780234 | MS.gene014835:intron | 30.0% |
| AACAGGACTAATTCCTTTAG+TGG | - | chr3.3:87782918-87782937 | None:intergenic | 35.0% | |
| ACAGGACTAATTCCTTTAGT+GGG | - | chr3.3:87782917-87782936 | None:intergenic | 35.0% | |
| AGACCTATCATTCTTAACCA+TGG | - | chr3.3:87781808-87781827 | None:intergenic | 35.0% | |
| AGATGGATATCAATGAAAGC+GGG | - | chr3.3:87782078-87782097 | None:intergenic | 35.0% | |
| AGGTGAGATGTGGTTAAAAA+AGG | - | chr3.3:87781354-87781373 | None:intergenic | 35.0% | |
| AGTTGTTACACTAGATAAGG+AGG | - | chr3.3:87783056-87783075 | None:intergenic | 35.0% | |
| ATATGATTATGAAGACCTCG+AGG | - | chr3.3:87780047-87780066 | None:intergenic | 35.0% | |
| ATGACCTACAATTAGCAGAA+GGG | - | chr3.3:87780783-87780802 | None:intergenic | 35.0% | |
| ATTATTACTTGCTTCTCCCT+TGG | + | chr3.3:87781145-87781164 | MS.gene014835:intron | 35.0% | |
| CAACATTCAAGCAAAAACCA+AGG | + | chr3.3:87781287-87781306 | MS.gene014835:CDS | 35.0% | |
| CACCAATTGATAGAATGAAG+TGG | - | chr3.3:87781748-87781767 | None:intergenic | 35.0% | |
| CAGATGGATATCAATGAAAG+CGG | - | chr3.3:87782079-87782098 | None:intergenic | 35.0% | |
| CCTAAATTTCAGAATCCAGA+TGG | - | chr3.3:87782095-87782114 | None:intergenic | 35.0% | |
| CTGTTTAATTCTGAACAGGA+TGG | + | chr3.3:87779707-87779726 | MS.gene014835:CDS | 35.0% | |
| CTTTCTCGTCAAGACTTAAA+CGG | - | chr3.3:87782880-87782899 | None:intergenic | 35.0% | |
| GAACAAACACTACACCAAAA+TGG | + | chr3.3:87779668-87779687 | MS.gene014835:CDS | 35.0% | |
| GCTCCCATAAAAATATCAAC+TGG | - | chr3.3:87782536-87782555 | None:intergenic | 35.0% | |
| GGTTCTTTCTTTATTAAGCG+TGG | - | chr3.3:87780500-87780519 | None:intergenic | 35.0% | |
| GTAGCAGATTCTCAATTGAA+TGG | + | chr3.3:87783199-87783218 | MS.gene014835:CDS | 35.0% | |
| GTGATTTATGCACATCTTCT+GGG | + | chr3.3:87780929-87780948 | MS.gene014835:intron | 35.0% | |
| TAACTAGAAAGACAACACCA+CGG | - | chr3.3:87781878-87781897 | None:intergenic | 35.0% | |
| TAGAAAGTGATTCTAACACC+CGG | + | chr3.3:87782590-87782609 | MS.gene014835:intron | 35.0% | |
| TAGATGTTAATTACTCTCCG+TGG | + | chr3.3:87781858-87781877 | MS.gene014835:intron | 35.0% | |
| TGTGATTTATGCACATCTTC+TGG | + | chr3.3:87780928-87780947 | MS.gene014835:intron | 35.0% | |
| TTATTACTTGCTTCTCCCTT+GGG | + | chr3.3:87781146-87781165 | MS.gene014835:intron | 35.0% | |
| TTATTCAAAGGAAACCCTCA+TGG | - | chr3.3:87781178-87781197 | None:intergenic | 35.0% | |
| TTTACTCTAAGCTTGAGGAA+AGG | + | chr3.3:87781238-87781257 | MS.gene014835:CDS | 35.0% | |
| TTTCCTGGAAGATTATCAAG+GGG | - | chr3.3:87780521-87780540 | None:intergenic | 35.0% | |
| ! | AGACAAACCACAACTCATTT+TGG | + | chr3.3:87783237-87783256 | MS.gene014835:CDS | 35.0% |
| ! | CTTTTCACTTATCTAGGCAT+AGG | + | chr3.3:87782196-87782215 | MS.gene014835:intron | 35.0% |
| ! | CTTTTCCTGGAAGATTATCA+AGG | - | chr3.3:87780523-87780542 | None:intergenic | 35.0% |
| ! | GATGTGGTTAAAAAAGGCAT+TGG | - | chr3.3:87781348-87781367 | None:intergenic | 35.0% |
| ! | GGAGAAATCTAGGACAAAAA+AGG | + | chr3.3:87779986-87780005 | MS.gene014835:CDS | 35.0% |
| ! | TACATTTTCTCTCAGCACAA+TGG | + | chr3.3:87780337-87780356 | MS.gene014835:intron | 35.0% |
| !! | CCATCTGGATTCTGAAATTT+AGG | + | chr3.3:87782092-87782111 | MS.gene014835:intron | 35.0% |
| !! | GGTGTTGTCTTTCTAGTTAA+TGG | + | chr3.3:87781879-87781898 | MS.gene014835:intron | 35.0% |
| !!! | TGCATCTAATCTGGTTTTAC+TGG | + | chr3.3:87782231-87782250 | MS.gene014835:intron | 35.0% |
| AACACTTCACTGGAAGATGA+TGG | + | chr3.3:87779641-87779660 | MS.gene014835:CDS | 40.0% | |
| AAGCTGAGATTAAGAGGCTT+AGG | + | chr3.3:87781401-87781420 | MS.gene014835:CDS | 40.0% | |
| AATTGCTTAGCTCCAGTTAG+AGG | + | chr3.3:87782308-87782327 | MS.gene014835:intron | 40.0% | |
| ATCAAAGTCTGACTACTACC+TGG | - | chr3.3:87780236-87780255 | None:intergenic | 40.0% | |
| ATTCTGTTGTGAAGTTGACG+TGG | - | chr3.3:87782291-87782310 | None:intergenic | 40.0% | |
| ATTTATGCACATCTTCTGGG+AGG | + | chr3.3:87780932-87780951 | MS.gene014835:intron | 40.0% | |
| CAGGACTAATTCCTTTAGTG+GGG | - | chr3.3:87782916-87782935 | None:intergenic | 40.0% | |
| CCTCAAGCTTAGAGTAAAAC+TGG | - | chr3.3:87781236-87781255 | None:intergenic | 40.0% | |
| CGCTTTCATTGATATCCATC+TGG | + | chr3.3:87782077-87782096 | MS.gene014835:intron | 40.0% | |
| GATGACCTACAATTAGCAGA+AGG | - | chr3.3:87780784-87780803 | None:intergenic | 40.0% | |
| GCTTGTTCGGAAATATTCCA+TGG | + | chr3.3:87781788-87781807 | MS.gene014835:intron | 40.0% | |
| GGATTCAGTTAACACTTCAC+TGG | + | chr3.3:87779631-87779650 | MS.gene014835:CDS | 40.0% | |
| GTGGTAAAGTGCATCTAATC+TGG | + | chr3.3:87782222-87782241 | MS.gene014835:intron | 40.0% | |
| TAGCAGAAGGGTTCAAAATG+AGG | - | chr3.3:87780771-87780790 | None:intergenic | 40.0% | |
| TCAAAGTCTGACTACTACCT+GGG | - | chr3.3:87780235-87780254 | None:intergenic | 40.0% | |
| TCTCAGAATAACCCCACTAA+AGG | + | chr3.3:87782902-87782921 | MS.gene014835:CDS | 40.0% | |
| TCTTGGATGAGAGTCTAAAG+TGG | - | chr3.3:87780144-87780163 | None:intergenic | 40.0% | |
| TGAACCCTTCTGCTAATTGT+AGG | + | chr3.3:87780776-87780795 | MS.gene014835:intron | 40.0% | |
| TTAGACAGATTACACACAGC+AGG | - | chr3.3:87781560-87781579 | None:intergenic | 40.0% | |
| TTCACAAGTCCAAATGCTCA+AGG | - | chr3.3:87782751-87782770 | None:intergenic | 40.0% | |
| TTGGATGAACTGATCCTTTC+AGG | - | chr3.3:87782986-87783005 | None:intergenic | 40.0% | |
| TTGGTACAAAAACCCATAGC+AGG | + | chr3.3:87783256-87783275 | MS.gene014835:CDS | 40.0% | |
| TTTCTCTTCCCTTGTTGCAA+TGG | - | chr3.3:87783095-87783114 | None:intergenic | 40.0% | |
| ! | CCAGTTTTACTCTAAGCTTG+AGG | + | chr3.3:87781233-87781252 | MS.gene014835:intron | 40.0% |
| ! | GAAGATGATTCAGCTTTTCC+TGG | - | chr3.3:87780536-87780555 | None:intergenic | 40.0% |
| ! | GGAGATTTTGCTCTTGTAGT+TGG | - | chr3.3:87782782-87782801 | None:intergenic | 40.0% |
| ! | TTTATGCACATCTTCTGGGA+GGG | + | chr3.3:87780933-87780952 | MS.gene014835:intron | 40.0% |
| !! | TTTGGCTCTATGTTCTGAGA+TGG | - | chr3.3:87783178-87783197 | None:intergenic | 40.0% |
| AACTGCACGGACTTCATCTA+AGG | + | chr3.3:87783012-87783031 | MS.gene014835:CDS | 45.0% | |
| AAGACAGCCGGTTAAGAACA+GGG | + | chr3.3:87780160-87780179 | MS.gene014835:CDS | 45.0% | |
| AAGGATTCATGCGAAGGAAG+TGG | + | chr3.3:87781257-87781276 | MS.gene014835:CDS | 45.0% | |
| ACTCTTCTTACGACCAAGCT+TGG | - | chr3.3:87782804-87782823 | None:intergenic | 45.0% | |
| AGAGCAAAATCTCCCAAGCT+TGG | + | chr3.3:87782788-87782807 | MS.gene014835:CDS | 45.0% | |
| AGGGTTCAAAATGAGGCATG+AGG | - | chr3.3:87780764-87780783 | None:intergenic | 45.0% | |
| ATAAAGAAATCGCCCTGTCC+TGG | - | chr3.3:87780605-87780624 | None:intergenic | 45.0% | |
| ATCCTTTCAGGAGTTAGTCG+AGG | - | chr3.3:87782974-87782993 | None:intergenic | 45.0% | |
| ATGCCAAACCTCGTAGAGTT+GGG | + | chr3.3:87781055-87781074 | MS.gene014835:CDS | 45.0% | |
| ATTGCCCAAGTCAAGCATGT+GGG | - | chr3.3:87781665-87781684 | None:intergenic | 45.0% | |
| CAACGACGGAAAAGATGAAG+AGG | + | chr3.3:87780085-87780104 | MS.gene014835:CDS | 45.0% | |
| CACCTTGTCCATTGCAACAA+GGG | + | chr3.3:87783084-87783103 | MS.gene014835:CDS | 45.0% | |
| CATCCAATTCAGCAACTGCA+CGG | + | chr3.3:87782999-87783018 | MS.gene014835:CDS | 45.0% | |
| CTCTTCTTACGACCAAGCTT+GGG | - | chr3.3:87782803-87782822 | None:intergenic | 45.0% | |
| CTTACTTGTGAGTGGAAACC+AGG | + | chr3.3:87780584-87780603 | MS.gene014835:intron | 45.0% | |
| CTTATCTAGGCATAGGTGTG+TGG | + | chr3.3:87782203-87782222 | MS.gene014835:intron | 45.0% | |
| GCATGCACATTTGTGCACTT+GGG | - | chr3.3:87781637-87781656 | None:intergenic | 45.0% | |
| GCCAAGAAGCTGAGATTAAG+AGG | + | chr3.3:87781395-87781414 | MS.gene014835:CDS | 45.0% | |
| GCCTCTTAATCTCAGCTTCT+TGG | - | chr3.3:87781399-87781418 | None:intergenic | 45.0% | |
| GGAGGGAGAAATCTTCTTTG+TGG | - | chr3.3:87782953-87782972 | None:intergenic | 45.0% | |
| GGTTTGGCATCTTCTGATGT+AGG | - | chr3.3:87781045-87781064 | None:intergenic | 45.0% | |
| GTTGGGACAATGCCAACTTA+TGG | + | chr3.3:87781072-87781091 | MS.gene014835:CDS | 45.0% | |
| TCAAAATTGCCAAGTCCTCG+AGG | + | chr3.3:87780029-87780048 | MS.gene014835:CDS | 45.0% | |
| TCCACTTGTCTCATCAGACA+AGG | - | chr3.3:87783152-87783171 | None:intergenic | 45.0% | |
| TCGATAGAACCAAGTCAGTG+TGG | - | chr3.3:87779887-87779906 | None:intergenic | 45.0% | |
| TCGGTGAGAAAGAACAACGA+CGG | + | chr3.3:87780071-87780090 | MS.gene014835:CDS | 45.0% | |
| TGAGGAAAGGATTCATGCGA+AGG | + | chr3.3:87781251-87781270 | MS.gene014835:CDS | 45.0% | |
| TGCATGCACATTTGTGCACT+TGG | - | chr3.3:87781638-87781657 | None:intergenic | 45.0% | |
| TGTGAAGTTGACGTGGCATT+TGG | - | chr3.3:87782284-87782303 | None:intergenic | 45.0% | |
| TGTGGTTTCTTTGGCTGAAC+AGG | - | chr3.3:87782935-87782954 | None:intergenic | 45.0% | |
| TTATGAAGACCTCGAGGACT+TGG | - | chr3.3:87780041-87780060 | None:intergenic | 45.0% | |
| TTCAAAGGAAACCCTCATGG+TGG | - | chr3.3:87781175-87781194 | None:intergenic | 45.0% | |
| TTCCCTTGTTGCAATGGACA+AGG | - | chr3.3:87783089-87783108 | None:intergenic | 45.0% | |
| TTCTTCAACTCCACCCTAGA+AGG | - | chr3.3:87781481-87781500 | None:intergenic | 45.0% | |
| TTGACTGCCCTGTTCTTAAC+CGG | - | chr3.3:87780170-87780189 | None:intergenic | 45.0% | |
| TTTCAGGAGTTAGTCGAGGA+GGG | - | chr3.3:87782970-87782989 | None:intergenic | 45.0% | |
| ! | CATTGGTGCTTCAGTAGATG+CGG | - | chr3.3:87780374-87780393 | None:intergenic | 45.0% |
| ! | GAACCCCTTGATAATCTTCC+AGG | + | chr3.3:87780515-87780534 | MS.gene014835:CDS | 45.0% |
| ! | TTATGCACATCTTCTGGGAG+GGG | + | chr3.3:87780934-87780953 | MS.gene014835:intron | 45.0% |
| !! | TTCTAGGGTGGAGTTGAAGA+AGG | + | chr3.3:87781480-87781499 | MS.gene014835:CDS | 45.0% |
| AACTCCACCCTAGAAGGAGT+AGG | - | chr3.3:87781475-87781494 | None:intergenic | 50.0% | |
| AGAACCAAGTCAGTGTGGAG+AGG | - | chr3.3:87779882-87779901 | None:intergenic | 50.0% | |
| AGACTCTCATCCAAGACAGC+CGG | + | chr3.3:87780148-87780167 | MS.gene014835:CDS | 50.0% | |
| AGTCCGTGCAGTTGCTGAAT+TGG | - | chr3.3:87783005-87783024 | None:intergenic | 50.0% | |
| CAAGACAGCCGGTTAAGAAC+AGG | + | chr3.3:87780159-87780178 | MS.gene014835:CDS | 50.0% | |
| CAAGCAGACTCGACATTCCA+AGG | + | chr3.3:87780193-87780212 | MS.gene014835:CDS | 50.0% | |
| CCACCTTGTCCATTGCAACA+AGG | + | chr3.3:87783083-87783102 | MS.gene014835:CDS | 50.0% | |
| CCTTGTTGCAATGGACAAGG+TGG | - | chr3.3:87783086-87783105 | None:intergenic | 50.0% | |
| CTCCTCGACTAACTCCTGAA+AGG | + | chr3.3:87782969-87782988 | MS.gene014835:CDS | 50.0% | |
| CTGTTCTTAACCGGCTGTCT+TGG | - | chr3.3:87780161-87780180 | None:intergenic | 50.0% | |
| CTTTCAGGAGTTAGTCGAGG+AGG | - | chr3.3:87782971-87782990 | None:intergenic | 50.0% | |
| GATGCCAAACCTCGTAGAGT+TGG | + | chr3.3:87781054-87781073 | MS.gene014835:CDS | 50.0% | |
| GATTCATGCGAAGGAAGTGG+AGG | + | chr3.3:87781260-87781279 | MS.gene014835:CDS | 50.0% | |
| GATTGCCCAAGTCAAGCATG+TGG | - | chr3.3:87781666-87781685 | None:intergenic | 50.0% | |
| GCCTTGTCTGATGAGACAAG+TGG | + | chr3.3:87783148-87783167 | MS.gene014835:CDS | 50.0% | |
| GCGAGCTGAGAGAAGAAAAG+AGG | + | chr3.3:87781116-87781135 | MS.gene014835:CDS | 50.0% | |
| GTTGACGTGGCATTTGGATG+AGG | - | chr3.3:87782278-87782297 | None:intergenic | 50.0% | |
| TCCAATGCCAAGCTTCTACC+AGG | + | chr3.3:87781447-87781466 | MS.gene014835:CDS | 50.0% | |
| TCCTGGTAGAAGCTTGGCAT+TGG | - | chr3.3:87781451-87781470 | None:intergenic | 50.0% | |
| TGAAGCAGCTGCAGCTATTG+AGG | + | chr3.3:87783117-87783136 | MS.gene014835:CDS | 50.0% | |
| TGCACGGACTTCATCTAAGG+CGG | + | chr3.3:87783015-87783034 | MS.gene014835:CDS | 50.0% | |
| TGTCCCAACTCTACGAGGTT+TGG | - | chr3.3:87781061-87781080 | None:intergenic | 50.0% | |
| TGTGAGTGGAAACCAGGACA+GGG | + | chr3.3:87780590-87780609 | MS.gene014835:intron | 50.0% | |
| TTGCATGCAATCAGGCAGAC+AGG | - | chr3.3:87781536-87781555 | None:intergenic | 50.0% | |
| TTGTGAGTGGAAACCAGGAC+AGG | + | chr3.3:87780589-87780608 | MS.gene014835:intron | 50.0% | |
| ! | GAATCCTCTCCACACTGACT+TGG | + | chr3.3:87779875-87779894 | MS.gene014835:intron | 50.0% |
| ACCAGGAGCCTACTCCTTCT+AGG | + | chr3.3:87781464-87781483 | MS.gene014835:CDS | 55.0% | |
| ACCCTCATGGTGGTAACCCA+AGG | - | chr3.3:87781165-87781184 | None:intergenic | 55.0% | |
| ACGCACCCACATGCTTGACT+TGG | + | chr3.3:87781657-87781676 | MS.gene014835:intron | 55.0% | |
| CAGCAGGCTTGCATGCAATC+AGG | - | chr3.3:87781544-87781563 | None:intergenic | 55.0% | |
| CCAGGAGCCTACTCCTTCTA+GGG | + | chr3.3:87781465-87781484 | MS.gene014835:CDS | 55.0% | |
| CCCTCATGGTGGTAACCCAA+GGG | - | chr3.3:87781164-87781183 | None:intergenic | 55.0% | |
| CCCTTGGGTTACCACCATGA+GGG | + | chr3.3:87781161-87781180 | MS.gene014835:intron | 55.0% | |
| CGCACCCACATGCTTGACTT+GGG | + | chr3.3:87781658-87781677 | MS.gene014835:intron | 55.0% | |
| GGCATTGTCCCAACTCTACG+AGG | - | chr3.3:87781066-87781085 | None:intergenic | 55.0% | |
| GTAGGCTCCTGGTAGAAGCT+TGG | - | chr3.3:87781457-87781476 | None:intergenic | 55.0% | |
| TCCCTTGGGTTACCACCATG+AGG | + | chr3.3:87781160-87781179 | MS.gene014835:intron | 55.0% | |
| CCCTAGAAGGAGTAGGCTCC+TGG | - | chr3.3:87781468-87781487 | None:intergenic | 60.0% | |
| ! | GGAGCCTACTCCTTCTAGGG+TGG | + | chr3.3:87781468-87781487 | MS.gene014835:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 87779629 | 87783282 | 87779629 | ID=MS.gene014835 |
| chr3.3 | mRNA | 87779629 | 87783282 | 87779629 | ID=MS.gene014835.t1;Parent=MS.gene014835 |
| chr3.3 | exon | 87779629 | 87779868 | 87779629 | ID=MS.gene014835.t1.exon1;Parent=MS.gene014835.t1 |
| chr3.3 | CDS | 87779629 | 87779868 | 87779629 | ID=cds.MS.gene014835.t1;Parent=MS.gene014835.t1 |
| chr3.3 | exon | 87779957 | 87780214 | 87779957 | ID=MS.gene014835.t1.exon2;Parent=MS.gene014835.t1 |
| chr3.3 | CDS | 87779957 | 87780214 | 87779957 | ID=cds.MS.gene014835.t1;Parent=MS.gene014835.t1 |
| chr3.3 | exon | 87780352 | 87780392 | 87780352 | ID=MS.gene014835.t1.exon3;Parent=MS.gene014835.t1 |
| chr3.3 | CDS | 87780352 | 87780392 | 87780352 | ID=cds.MS.gene014835.t1;Parent=MS.gene014835.t1 |
| chr3.3 | exon | 87780484 | 87780555 | 87780484 | ID=MS.gene014835.t1.exon4;Parent=MS.gene014835.t1 |
| chr3.3 | CDS | 87780484 | 87780555 | 87780484 | ID=cds.MS.gene014835.t1;Parent=MS.gene014835.t1 |
| chr3.3 | exon | 87781041 | 87781137 | 87781041 | ID=MS.gene014835.t1.exon5;Parent=MS.gene014835.t1 |
| chr3.3 | CDS | 87781041 | 87781137 | 87781041 | ID=cds.MS.gene014835.t1;Parent=MS.gene014835.t1 |
| chr3.3 | exon | 87781237 | 87781308 | 87781237 | ID=MS.gene014835.t1.exon6;Parent=MS.gene014835.t1 |
| chr3.3 | CDS | 87781237 | 87781308 | 87781237 | ID=cds.MS.gene014835.t1;Parent=MS.gene014835.t1 |
| chr3.3 | exon | 87781391 | 87781501 | 87781391 | ID=MS.gene014835.t1.exon7;Parent=MS.gene014835.t1 |
| chr3.3 | CDS | 87781391 | 87781501 | 87781391 | ID=cds.MS.gene014835.t1;Parent=MS.gene014835.t1 |
| chr3.3 | exon | 87782776 | 87783282 | 87782776 | ID=MS.gene014835.t1.exon8;Parent=MS.gene014835.t1 |
| chr3.3 | CDS | 87782776 | 87783282 | 87782776 | ID=cds.MS.gene014835.t1;Parent=MS.gene014835.t1 |
| Gene Sequence |
| Protein sequence |
