Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33200.t1 | XP_003588767.2 | 91.1 | 463 | 37 | 2 | 1 | 463 | 1 | 459 | 4.50E-185 | 657.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33200.t1 | Q94C48 | 34.4 | 360 | 213 | 10 | 105 | 447 | 83 | 436 | 3.5e-29 | 131.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33200.t1 | G7I707 | 91.1 | 463 | 37 | 2 | 1 | 463 | 1 | 459 | 3.3e-185 | 657.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene014835 | MS.gene33200 | PPI |
| MS.gene33200 | MS.gene60284 | PPI |
| MS.gene33200 | MS.gene32634 | PPI |
| MS.gene015987 | MS.gene33200 | PPI |
| MS.gene61699 | MS.gene33200 | PPI |
| MS.gene33200 | MS.gene072889 | PPI |
| MS.gene67065 | MS.gene33200 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33200.t1 | MTR_1g012530 | 91.361 | 463 | 36 | 2 | 1 | 463 | 1 | 459 | 0.0 | 815 |
| MS.gene33200.t1 | MTR_1g012530 | 89.028 | 319 | 34 | 1 | 1 | 319 | 1 | 318 | 0.0 | 545 |
| MS.gene33200.t1 | MTR_3g107050 | 51.368 | 475 | 190 | 10 | 2 | 459 | 1 | 451 | 1.17e-135 | 398 |
| MS.gene33200.t1 | MTR_1g055085 | 60.145 | 138 | 52 | 2 | 228 | 365 | 233 | 367 | 9.63e-40 | 149 |
| MS.gene33200.t1 | MTR_7g106750 | 55.034 | 149 | 45 | 5 | 228 | 373 | 238 | 367 | 2.80e-36 | 139 |
| MS.gene33200.t1 | MTR_1g075310 | 48.092 | 131 | 63 | 2 | 230 | 355 | 217 | 347 | 3.44e-29 | 118 |
| MS.gene33200.t1 | MTR_1g080690 | 48.062 | 129 | 55 | 3 | 230 | 346 | 195 | 323 | 4.30e-25 | 106 |
| MS.gene33200.t1 | MTR_7g115310 | 48.031 | 127 | 62 | 1 | 221 | 347 | 207 | 329 | 6.63e-22 | 99.8 |
| MS.gene33200.t1 | MTR_6g022230 | 44.444 | 90 | 45 | 3 | 229 | 316 | 416 | 502 | 8.96e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33200.t1 | AT4G32330 | 43.081 | 383 | 178 | 12 | 2 | 375 | 1 | 352 | 2.67e-75 | 243 |
| MS.gene33200.t1 | AT4G32330 | 42.969 | 384 | 178 | 13 | 2 | 375 | 1 | 353 | 6.28e-74 | 239 |
| MS.gene33200.t1 | AT4G32330 | 42.969 | 384 | 178 | 13 | 2 | 375 | 1 | 353 | 6.28e-74 | 239 |
| MS.gene33200.t1 | AT4G32330 | 42.969 | 384 | 178 | 13 | 2 | 375 | 1 | 353 | 6.28e-74 | 239 |
| MS.gene33200.t1 | AT2G25480 | 48.864 | 264 | 124 | 6 | 143 | 403 | 99 | 354 | 3.98e-63 | 210 |
| MS.gene33200.t1 | AT2G25480 | 48.864 | 264 | 125 | 6 | 143 | 403 | 99 | 355 | 5.80e-63 | 209 |
| MS.gene33200.t1 | AT2G35880 | 70.476 | 105 | 30 | 1 | 219 | 323 | 236 | 339 | 9.97e-40 | 148 |
| MS.gene33200.t1 | AT2G35880 | 70.476 | 105 | 30 | 1 | 219 | 323 | 236 | 339 | 9.97e-40 | 148 |
| MS.gene33200.t1 | AT2G35880 | 70.476 | 105 | 30 | 1 | 219 | 323 | 236 | 339 | 9.97e-40 | 148 |
| MS.gene33200.t1 | AT3G23090 | 65.909 | 88 | 30 | 0 | 230 | 317 | 196 | 283 | 3.80e-28 | 114 |
| MS.gene33200.t1 | AT3G23090 | 65.909 | 88 | 30 | 0 | 230 | 317 | 195 | 282 | 3.89e-28 | 114 |
| MS.gene33200.t1 | AT3G23090 | 65.909 | 88 | 30 | 0 | 230 | 317 | 231 | 318 | 7.47e-28 | 114 |
| MS.gene33200.t1 | AT3G23090 | 63.043 | 92 | 30 | 1 | 230 | 317 | 195 | 286 | 2.47e-27 | 112 |
| MS.gene33200.t1 | AT3G23090 | 63.043 | 92 | 30 | 1 | 230 | 317 | 231 | 322 | 4.20e-27 | 112 |
| MS.gene33200.t1 | AT5G28646 | 47.154 | 123 | 59 | 2 | 222 | 342 | 84 | 202 | 7.51e-24 | 99.4 |
| MS.gene33200.t1 | AT5G28646 | 47.154 | 123 | 59 | 2 | 222 | 342 | 84 | 202 | 7.51e-24 | 99.4 |
| MS.gene33200.t1 | AT5G28646 | 47.154 | 123 | 59 | 2 | 222 | 342 | 80 | 198 | 7.99e-24 | 99.0 |
| MS.gene33200.t1 | AT3G04630 | 54.444 | 90 | 39 | 1 | 227 | 314 | 123 | 212 | 1.09e-22 | 98.2 |
| MS.gene33200.t1 | AT3G04630 | 54.444 | 90 | 39 | 1 | 227 | 314 | 122 | 211 | 1.10e-22 | 98.2 |
| MS.gene33200.t1 | AT3G04630 | 54.444 | 90 | 39 | 1 | 227 | 314 | 127 | 216 | 1.15e-22 | 98.2 |
| MS.gene33200.t1 | AT1G54460 | 45.378 | 119 | 60 | 2 | 206 | 323 | 145 | 259 | 1.21e-21 | 96.3 |
| MS.gene33200.t1 | AT1G70950 | 50.000 | 86 | 39 | 1 | 229 | 310 | 328 | 413 | 5.83e-19 | 89.7 |
Find 114 sgRNAs with CRISPR-Local
Find 308 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAATTATGGATTCAGTTTC+AGG | 0.129280 | 1.2:+9067339 | MS.gene33200:CDS |
| CTGAAACTGAATCCATAATT+TGG | 0.234073 | 1.2:-9067338 | None:intergenic |
| GTGGGGACACTTCCAAATTA+TGG | 0.282695 | 1.2:+9067326 | MS.gene33200:CDS |
| TCAGCAGGCAAGGGATTAAT+TGG | 0.284030 | 1.2:-9065924 | None:intergenic |
| CACGACGAACCTTCTAATTC+TGG | 0.301211 | 1.2:+9065978 | MS.gene33200:CDS |
| TCCATTGCCAACTTTCTATC+AGG | 0.308595 | 1.2:+9067709 | MS.gene33200:CDS |
| TTTCTCTTCCCCTGTAGCTT+TGG | 0.321630 | 1.2:-9070037 | None:intergenic |
| GTCTTCTTCCGACCAAGCTT+GGG | 0.328574 | 1.2:-9069784 | None:intergenic |
| AAGCTAGTATCTTTCTTTGT+TGG | 0.330091 | 1.2:-9070012 | None:intergenic |
| ATGGAGTTGCTTTAAAAGTT+AGG | 0.333174 | 1.2:-9067691 | None:intergenic |
| CAGCGGTGTTAATGCAAGTT+TGG | 0.358129 | 1.2:+9066355 | MS.gene33200:CDS |
| ACATCAGAAGACGCTGCTTC+AGG | 0.363490 | 1.2:-9066967 | None:intergenic |
| GTTCGTCGTGAACACCGTTT+TGG | 0.381078 | 1.2:-9065965 | None:intergenic |
| GACGCTGCTTCAGGCTTTGA+AGG | 0.389307 | 1.2:-9066958 | None:intergenic |
| CTTCTCCTTGAACTTTATCA+AGG | 0.390003 | 1.2:-9067130 | None:intergenic |
| TAAGGTTGAGGAAAAGATTC+AGG | 0.390503 | 1.2:+9067506 | MS.gene33200:CDS |
| AGCTGCTGAATTGGAAGAAT+TGG | 0.396114 | 1.2:-9069974 | None:intergenic |
| TGTAGGTGCAGCTGCTGAAT+TGG | 0.397011 | 1.2:-9069983 | None:intergenic |
| AGTCTTCTTCCGACCAAGCT+TGG | 0.401334 | 1.2:-9069785 | None:intergenic |
| CAGTTGGAAAGCACTGGAAC+TGG | 0.409681 | 1.2:+9066089 | MS.gene33200:CDS |
| GGAACAGTCAAGAGCACAAA+AGG | 0.414883 | 1.2:+9066292 | MS.gene33200:CDS |
| CTTCCTAAGCTTTCTAATCT+CGG | 0.418203 | 1.2:-9067666 | None:intergenic |
| AGTATCTTTCTTTGTTGGCC+TGG | 0.422922 | 1.2:-9070007 | None:intergenic |
| TTCTTTGTTGGCCTGGATGT+AGG | 0.428959 | 1.2:-9070000 | None:intergenic |
| TGTCCCCACTCTGCGAGGTT+TGG | 0.435993 | 1.2:-9067312 | None:intergenic |
| ACTAGCTTATCCAAAGCTAC+AGG | 0.441373 | 1.2:+9070027 | MS.gene33200:CDS |
| AGCTCCACCTTAGGAGGAGC+AGG | 0.446075 | 1.2:-9067734 | None:intergenic |
| CCATCCTCTCCAGAATTAGA+AGG | 0.447912 | 1.2:-9065987 | None:intergenic |
| TTTGCATTCTTATTCTTGAC+AGG | 0.449148 | 1.2:-9066317 | None:intergenic |
| GACAATGGCATCTCCTTTAG+TGG | 0.454757 | 1.2:-9069896 | None:intergenic |
| ACCTTCTTCAGCTCCACCTT+AGG | 0.458299 | 1.2:-9067743 | None:intergenic |
| CAAAGTTGGAAAAGACAAAC+AGG | 0.463790 | 1.2:+9066388 | MS.gene33200:CDS |
| TTGTGAGCAGTTCCTCACTA+AGG | 0.463940 | 1.2:+9067488 | MS.gene33200:intron |
| TTCTGAAAATATCAATCAGT+TGG | 0.465513 | 1.2:+9066073 | MS.gene33200:CDS |
| TGTGCTCTTGACTGTTCCGT+TGG | 0.466042 | 1.2:-9066287 | None:intergenic |
| CAATAATTTGATCGTTTCAA+AGG | 0.466984 | 1.2:+9066160 | MS.gene33200:CDS |
| AATTCAGAGTCTGATGGAAA+TGG | 0.469317 | 1.2:+9069814 | MS.gene33200:CDS |
| TCAGGAGCCTGCTCCTCCTA+AGG | 0.477024 | 1.2:+9067727 | MS.gene33200:CDS |
| TTCACAAGACATTCTTCACT+TGG | 0.478405 | 1.2:-9070150 | None:intergenic |
| TTCTCCTTGAACTTTATCAA+GGG | 0.481497 | 1.2:-9067129 | None:intergenic |
| GGTCCTTTCAGAAGCAAGTC+GGG | 0.481741 | 1.2:-9069953 | None:intergenic |
| TCTGAAGGAGCCGCATTATG+AGG | 0.482661 | 1.2:-9070123 | None:intergenic |
| GCGGTGAACGAGCCGAGAAA+AGG | 0.484677 | 1.2:+9067363 | MS.gene33200:CDS |
| GCATCATCCGCTGTCTCAAA+TGG | 0.487290 | 1.2:+9066410 | MS.gene33200:CDS |
| ATCAAGTCCATCAGCAGGCA+AGG | 0.494390 | 1.2:-9065934 | None:intergenic |
| ATTAATCCCTTGCCTGCTGA+TGG | 0.494725 | 1.2:+9065927 | MS.gene33200:CDS |
| TTCTTCAGCTCCACCTTAGG+AGG | 0.495466 | 1.2:-9067740 | None:intergenic |
| ATCAATCAGTTGGAAAGCAC+TGG | 0.499209 | 1.2:+9066083 | MS.gene33200:CDS |
| CCGCTCATTCAATGATCGGC+AGG | 0.502367 | 1.2:+9066475 | MS.gene33200:CDS |
| CAGAAGCAAGTCGGGTAGGA+AGG | 0.504025 | 1.2:-9069945 | None:intergenic |
| GGACCCCTTGATAAAGTTCA+AGG | 0.509202 | 1.2:+9067125 | MS.gene33200:CDS |
| TTCTGTATTTACAGTAACAT+GGG | 0.519769 | 1.2:-9066030 | None:intergenic |
| TCTTCACTTGGCTTATCTGA+AGG | 0.524692 | 1.2:-9070138 | None:intergenic |
| ACAGAAACTGTTGTTCCAGA+TGG | 0.529358 | 1.2:+9066047 | MS.gene33200:CDS |
| CAGCAGCTGCACCTACATCC+AGG | 0.533108 | 1.2:+9069989 | MS.gene33200:CDS |
| AACTGGAAACTCGTCTATGA+AGG | 0.533703 | 1.2:+9066106 | MS.gene33200:CDS |
| AGGTTTGGCATCTTCAGTGT+TGG | 0.535856 | 1.2:-9067297 | None:intergenic |
| AATAAGAATGCAAAGGTTGG+TGG | 0.536003 | 1.2:+9066326 | MS.gene33200:CDS |
| TTTCTGTATTTACAGTAACA+TGG | 0.539403 | 1.2:-9066031 | None:intergenic |
| AAGAATAAGAATGCAAAGGT+TGG | 0.541032 | 1.2:+9066323 | MS.gene33200:CDS |
| TCACAAGGAAACTCCACTAA+AGG | 0.546027 | 1.2:+9069883 | MS.gene33200:CDS |
| CCTTCTAATTCTGGAGAGGA+TGG | 0.547143 | 1.2:+9065987 | MS.gene33200:CDS |
| AAAGATTCAGGCAAAGGAGG+AGG | 0.547835 | 1.2:+9067518 | MS.gene33200:CDS |
| TCCTAAGGTGGAGCTGAAGA+AGG | 0.549377 | 1.2:+9067742 | MS.gene33200:CDS |
| TCTCCTTGAACTTTATCAAG+GGG | 0.551027 | 1.2:-9067128 | None:intergenic |
| CAAACTTGCATTAACACCGC+TGG | 0.555031 | 1.2:-9066354 | None:intergenic |
| GATGCCAAACCTCGCAGAGT+GGG | 0.558738 | 1.2:+9067308 | MS.gene33200:CDS |
| CTAGCTTATCCAAAGCTACA+GGG | 0.558761 | 1.2:+9070028 | MS.gene33200:CDS |
| TCTTCTTCCGACCAAGCTTG+GGG | 0.559077 | 1.2:-9069783 | None:intergenic |
| TGAGGAAAAGATTCAGGCAA+AGG | 0.563894 | 1.2:+9067512 | MS.gene33200:CDS |
| GCTCAATGCACAGTCATGAT+CGG | 0.564147 | 1.2:-9070222 | None:intergenic |
| TCAACAAATTCAGAGTCTGA+TGG | 0.564610 | 1.2:+9069808 | MS.gene33200:CDS |
| GCAGGCTCCTGATAGAAAGT+TGG | 0.569966 | 1.2:-9067716 | None:intergenic |
| AGGCCGAGATTAGAAAGCTT+AGG | 0.571850 | 1.2:+9067663 | MS.gene33200:CDS |
| CTTGATGATGTCCACCAAAA+CGG | 0.572886 | 1.2:+9065951 | MS.gene33200:CDS |
| ACATCATCAAGTCCATCAGC+AGG | 0.573313 | 1.2:-9065939 | None:intergenic |
| AAAACCGCTCATTCAATGAT+CGG | 0.576323 | 1.2:+9066471 | MS.gene33200:CDS |
| AGAAGCAAGTCGGGTAGGAA+GGG | 0.593358 | 1.2:-9069944 | None:intergenic |
| TGGTCCTTTCAGAAGCAAGT+CGG | 0.594849 | 1.2:-9069954 | None:intergenic |
| CTACCCGACTTGCTTCTGAA+AGG | 0.597161 | 1.2:+9069950 | MS.gene33200:CDS |
| GGAGCCTGCTCCTCCTAAGG+TGG | 0.600395 | 1.2:+9067730 | MS.gene33200:CDS |
| TCTTGTGACAACACGAGCTG+AGG | 0.603555 | 1.2:-9070198 | None:intergenic |
| AGTGAAGAATGTCTTGTGAA+TGG | 0.604525 | 1.2:+9070153 | MS.gene33200:CDS |
| CTTCTTCCGACCAAGCTTGG+GGG | 0.607681 | 1.2:-9069782 | None:intergenic |
| TCTTGTGAATGGTGACATAG+TGG | 0.607830 | 1.2:+9070164 | MS.gene33200:CDS |
| GGAAAAGATTCAGGCAAAGG+AGG | 0.608287 | 1.2:+9067515 | MS.gene33200:CDS |
| GAACAGTCAAGAGCACAAAA+GGG | 0.609638 | 1.2:+9066293 | MS.gene33200:CDS |
| AGTGAAAATAAAAGTTCCAA+CGG | 0.609860 | 1.2:+9066271 | MS.gene33200:CDS |
| TGTTGCTCTGCCTCATAATG+CGG | 0.612528 | 1.2:+9070113 | MS.gene33200:CDS |
| TCAAGTCCATCAGCAGGCAA+GGG | 0.615834 | 1.2:-9065933 | None:intergenic |
| TCGGCAGGCTCAACTGTCCA+AGG | 0.618945 | 1.2:+9066490 | MS.gene33200:CDS |
| TCTGTATTTACAGTAACATG+GGG | 0.619012 | 1.2:-9066029 | None:intergenic |
| GCAGTTCCTCACTAAGGTTG+AGG | 0.619309 | 1.2:+9067494 | MS.gene33200:intron |
| TCCTGATAGAAAGTTGGCAA+TGG | 0.619813 | 1.2:-9067710 | None:intergenic |
| CCTGCCGATCATTGAATGAG+CGG | 0.621740 | 1.2:-9066475 | None:intergenic |
| ATGCCAAACCTCGCAGAGTG+GGG | 0.623165 | 1.2:+9067309 | MS.gene33200:CDS |
| AACATTTGTATCACTTGACA+AGG | 0.624464 | 1.2:-9070094 | None:intergenic |
| TGTCAAGAATAAGAATGCAA+AGG | 0.625023 | 1.2:+9066319 | MS.gene33200:CDS |
| GGTAGCTGCAGTTCTCGACA+AGG | 0.636601 | 1.2:+9069835 | MS.gene33200:CDS |
| CTTTCAGAAGCAAGTCGGGT+AGG | 0.637355 | 1.2:-9069949 | None:intergenic |
| TCGTCTATGAAGGAAATCGA+AGG | 0.639138 | 1.2:+9066116 | MS.gene33200:CDS |
| GGAAGTGTCCCCACTCTGCG+AGG | 0.641410 | 1.2:-9067317 | None:intergenic |
| AGAAGTGCCATTTGAGACAG+CGG | 0.643689 | 1.2:-9066417 | None:intergenic |
| TAGCTTGCAAGCAAAATCCA+AGG | 0.644380 | 1.2:+9067548 | MS.gene33200:CDS |
| AAGGTTGGTGGTAGTTCCAG+CGG | 0.645340 | 1.2:+9066338 | MS.gene33200:CDS |
| TAGCTTATCCAAAGCTACAG+GGG | 0.645381 | 1.2:+9070029 | MS.gene33200:CDS |
| ACGAGCCGAGAAAAGGAGAG+AGG | 0.654233 | 1.2:+9067370 | MS.gene33200:CDS |
| GTAGGAAGGGACTTTCGTAG+TGG | 0.654273 | 1.2:-9069931 | None:intergenic |
| CTGAACGAGAAAGTGTCACA+AGG | 0.655908 | 1.2:+9069868 | MS.gene33200:CDS |
| CGAACCTTCTAATTCTGGAG+AGG | 0.658571 | 1.2:+9065983 | MS.gene33200:CDS |
| TATGGATTCAGTTTCAGGTG+CGG | 0.674466 | 1.2:+9067344 | MS.gene33200:CDS |
| AGATGCCAAACCTCGCAGAG+TGG | 0.675110 | 1.2:+9067307 | MS.gene33200:CDS |
| CGAAGGATCGAATGACAACG+TGG | 0.698275 | 1.2:+9066133 | MS.gene33200:CDS |
| CTGTATTTACAGTAACATGG+GGG | 0.709302 | 1.2:-9066028 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAATAAGATTATGTAA+AGG | - | chr1.2:9069572-9069591 | None:intergenic | 10.0% |
| !!! | ATTTTTATTTATACTAGAAA+AGG | + | chr1.2:9069415-9069434 | MS.gene33200:intron | 10.0% |
| !!! | TATAATAATTTTTAGAATTC+AGG | - | chr1.2:9068876-9068895 | None:intergenic | 10.0% |
| !!! | TATTATATTTTTATAGTTCA+GGG | - | chr1.2:9066692-9066711 | None:intergenic | 10.0% |
| !!! | TTATTATATTTTTATAGTTC+AGG | - | chr1.2:9066693-9066712 | None:intergenic | 10.0% |
| !!! | TTTTCTAGTATAAATAAAAA+TGG | - | chr1.2:9069416-9069435 | None:intergenic | 10.0% |
| !! | AAAAACAAAATCATTGAAAA+AGG | + | chr1.2:9067103-9067122 | MS.gene33200:CDS | 15.0% |
| !! | AAAACAAAATCATTGAAAAA+GGG | + | chr1.2:9067104-9067123 | MS.gene33200:CDS | 15.0% |
| !! | AAAGCAAATAAAAAAATTTC+TGG | - | chr1.2:9067938-9067957 | None:intergenic | 15.0% |
| !! | AGTAAAAATGATACTTATAA+GGG | + | chr1.2:9067032-9067051 | MS.gene33200:intron | 15.0% |
| !! | TAAAAAAAATAAGGTTTCAA+AGG | - | chr1.2:9069054-9069073 | None:intergenic | 15.0% |
| !! | TAGTAAAAATGATACTTATA+AGG | + | chr1.2:9067031-9067050 | MS.gene33200:intron | 15.0% |
| !!! | TAAACTATTTCTATAGTTAA+GGG | + | chr1.2:9066831-9066850 | MS.gene33200:intron | 15.0% |
| !!! | TCTTTATTTGTGTAATATTT+GGG | + | chr1.2:9068254-9068273 | MS.gene33200:intron | 15.0% |
| !!! | TTAAACTATTTCTATAGTTA+AGG | + | chr1.2:9066830-9066849 | MS.gene33200:intron | 15.0% |
| !! | ATAATGTATTATTGAGTATG+AGG | + | chr1.2:9067237-9067256 | MS.gene33200:intron | 20.0% |
| !! | ATACGGATATATGAAATAAA+AGG | + | chr1.2:9068523-9068542 | MS.gene33200:intron | 20.0% |
| !! | CATTAGATAATCTGAAAATA+TGG | + | chr1.2:9068578-9068597 | MS.gene33200:intron | 20.0% |
| !! | GATAGTTTATGAATAATCTA+AGG | + | chr1.2:9066802-9066821 | MS.gene33200:intron | 20.0% |
| !! | TAAATAAACTCATAAGAGAA+AGG | - | chr1.2:9067173-9067192 | None:intergenic | 20.0% |
| !! | TCATATATCCGTATAAATAA+TGG | - | chr1.2:9068517-9068536 | None:intergenic | 20.0% |
| !! | TCTAAATCAGTTATATGATT+TGG | + | chr1.2:9066215-9066234 | MS.gene33200:intron | 20.0% |
| !! | TTACTCTTAAGATTATAGTT+TGG | + | chr1.2:9066897-9066916 | MS.gene33200:intron | 20.0% |
| !! | TTATTTATACTAGAAAAGGT+TGG | + | chr1.2:9069419-9069438 | MS.gene33200:intron | 20.0% |
| !! | TTGTAAGACCATTATTTATA+CGG | + | chr1.2:9068506-9068525 | MS.gene33200:intron | 20.0% |
| !!! | ACTATTTTAAAAGTAACTGA+GGG | - | chr1.2:9066752-9066771 | None:intergenic | 20.0% |
| !!! | AGATAATTTTCAAATCTGAA+TGG | - | chr1.2:9069142-9069161 | None:intergenic | 20.0% |
| !!! | AGATTTTCTTGTTTAAGAAA+AGG | - | chr1.2:9068114-9068133 | None:intergenic | 20.0% |
| !!! | ATAATTTTTAGAATTCAGGT+TGG | - | chr1.2:9068872-9068891 | None:intergenic | 20.0% |
| !!! | GTCTTTATTTGTGTAATATT+TGG | + | chr1.2:9068253-9068272 | MS.gene33200:intron | 20.0% |
| !!! | TAATATATTTGCTTTGTTCT+AGG | + | chr1.2:9066241-9066260 | MS.gene33200:intron | 20.0% |
| !!! | TAATTATGATTTGGTTATTG+TGG | + | chr1.2:9069072-9069091 | MS.gene33200:intron | 20.0% |
| !!! | TAATTTTTAGAATTCAGGTT+GGG | - | chr1.2:9068871-9068890 | None:intergenic | 20.0% |
| !!! | TACTATTTTAAAAGTAACTG+AGG | - | chr1.2:9066753-9066772 | None:intergenic | 20.0% |
| !!! | TATTGTGGCTTTTAAAATTA+TGG | + | chr1.2:9069087-9069106 | MS.gene33200:intron | 20.0% |
| !!! | TATTTTCAGATTATCTAATG+TGG | - | chr1.2:9068578-9068597 | None:intergenic | 20.0% |
| !!! | TTATCTAAAACAGAAAGAAA+AGG | - | chr1.2:9066611-9066630 | None:intergenic | 20.0% |
| !!! | TTTTCTTAAACAAGAAAATC+TGG | + | chr1.2:9068113-9068132 | MS.gene33200:intron | 20.0% |
| ! | AAAATAGAAGAAGACACAAA+AGG | - | chr1.2:9066587-9066606 | None:intergenic | 25.0% |
| ! | AGTGAAAATAAAAGTTCCAA+CGG | + | chr1.2:9066271-9066290 | MS.gene33200:CDS | 25.0% |
| ! | ATTGTGATTTCAATTTCAGT+TGG | + | chr1.2:9068938-9068957 | MS.gene33200:intron | 25.0% |
| ! | CAATAATTTGATCGTTTCAA+AGG | + | chr1.2:9066160-9066179 | MS.gene33200:CDS | 25.0% |
| ! | GAATTACTGACATGATTAAA+AGG | - | chr1.2:9067619-9067638 | None:intergenic | 25.0% |
| ! | TAATGTATGTGTTTATGAGA+GGG | + | chr1.2:9067969-9067988 | MS.gene33200:intron | 25.0% |
| ! | TAGAACAAGTTTATAGTTCA+GGG | + | chr1.2:9066771-9066790 | MS.gene33200:intron | 25.0% |
| ! | TCAAGATATAACTACGTATA+TGG | + | chr1.2:9068906-9068925 | MS.gene33200:intron | 25.0% |
| ! | TCTGAAAATATGGTTATAAG+TGG | + | chr1.2:9068588-9068607 | MS.gene33200:intron | 25.0% |
| ! | TGCTTAATAAACACATCATT+GGG | + | chr1.2:9069491-9069510 | MS.gene33200:intron | 25.0% |
| ! | TTCTGTATTTACAGTAACAT+GGG | - | chr1.2:9066033-9066052 | None:intergenic | 25.0% |
| ! | TTTCTGTATTTACAGTAACA+TGG | - | chr1.2:9066034-9066053 | None:intergenic | 25.0% |
| ! | TTTGTTCACATATATATCCA+CGG | + | chr1.2:9069209-9069228 | MS.gene33200:intron | 25.0% |
| !! | AGTAATTCTCACACTTTTAT+AGG | + | chr1.2:9067631-9067650 | MS.gene33200:intron | 25.0% |
| !! | ATATTTTCAGAATTTCCATC+TGG | - | chr1.2:9066065-9066084 | None:intergenic | 25.0% |
| !! | TTCTGAAAATATCAATCAGT+TGG | + | chr1.2:9066073-9066092 | MS.gene33200:CDS | 25.0% |
| !!! | AAAAGTTTGGTCTTATCATT+TGG | + | chr1.2:9069697-9069716 | MS.gene33200:intron | 25.0% |
| !!! | ATTGTTTTTTTCCTGTTATC+TGG | + | chr1.2:9069538-9069557 | MS.gene33200:intron | 25.0% |
| !!! | TGATGCTGATTTTTTTTTCA+TGG | - | chr1.2:9068142-9068161 | None:intergenic | 25.0% |
| !!! | TTGTTTTTTTCCTGTTATCT+GGG | + | chr1.2:9069539-9069558 | MS.gene33200:intron | 25.0% |
| AACATTTGTATCACTTGACA+AGG | - | chr1.2:9070097-9070116 | None:intergenic | 30.0% | |
| AACCTGTATAATGATACCAA+AGG | - | chr1.2:9067422-9067441 | None:intergenic | 30.0% | |
| AACTATCACTCTCACTTATT+TGG | + | chr1.2:9066665-9066684 | MS.gene33200:intron | 30.0% | |
| AACTATCACTCTCTCTTATT+TGG | - | chr1.2:9066858-9066877 | None:intergenic | 30.0% | |
| AAGAAATATCATATCTGTGG+AGG | + | chr1.2:9068483-9068502 | MS.gene33200:intron | 30.0% | |
| AAGAATAAGAATGCAAAGGT+TGG | + | chr1.2:9066323-9066342 | MS.gene33200:CDS | 30.0% | |
| AAGCTAGTATCTTTCTTTGT+TGG | - | chr1.2:9070015-9070034 | None:intergenic | 30.0% | |
| AATAAACACATCATTGGGAA+AGG | + | chr1.2:9069496-9069515 | MS.gene33200:intron | 30.0% | |
| ACAGGAAAAAAACAATCAAG+AGG | - | chr1.2:9069534-9069553 | None:intergenic | 30.0% | |
| ACTATCACTCTCACTTATTT+GGG | + | chr1.2:9066666-9066685 | MS.gene33200:intron | 30.0% | |
| ATAAACACATCATTGGGAAA+GGG | + | chr1.2:9069497-9069516 | MS.gene33200:intron | 30.0% | |
| CAAATTATGGATTCAGTTTC+AGG | + | chr1.2:9067339-9067358 | MS.gene33200:CDS | 30.0% | |
| CAGGAAAAAAACAATCAAGA+GGG | - | chr1.2:9069533-9069552 | None:intergenic | 30.0% | |
| CCAGAAAATATGTTTACAAG+TGG | + | chr1.2:9068801-9068820 | MS.gene33200:intron | 30.0% | |
| CTGAAACTGAATCCATAATT+TGG | - | chr1.2:9067341-9067360 | None:intergenic | 30.0% | |
| CTGCTTAATAAACACATCAT+TGG | + | chr1.2:9069490-9069509 | MS.gene33200:intron | 30.0% | |
| GAAAATATGGTTATAAGTGG+TGG | + | chr1.2:9068591-9068610 | MS.gene33200:intron | 30.0% | |
| GAGTTCCTAAGTAAACATTT+GGG | - | chr1.2:9066545-9066564 | None:intergenic | 30.0% | |
| GCTAAGAAATATCATATCTG+TGG | + | chr1.2:9068480-9068499 | MS.gene33200:intron | 30.0% | |
| GTAACCCATTTAAAAACTTC+TGG | - | chr1.2:9069674-9069693 | None:intergenic | 30.0% | |
| GTAATGTATGTGTTTATGAG+AGG | + | chr1.2:9067968-9067987 | MS.gene33200:intron | 30.0% | |
| GTAGAACAAGTTTATAGTTC+AGG | + | chr1.2:9066770-9066789 | MS.gene33200:intron | 30.0% | |
| GTTAGCTCATTATAGTGATT+TGG | + | chr1.2:9068440-9068459 | MS.gene33200:intron | 30.0% | |
| TAACTCAACCCTAACAAAAT+CGG | - | chr1.2:9068635-9068654 | None:intergenic | 30.0% | |
| TCTAATCAGTAGATGGTTTA+GGG | + | chr1.2:9069273-9069292 | MS.gene33200:intron | 30.0% | |
| TCTGTATTTACAGTAACATG+GGG | - | chr1.2:9066032-9066051 | None:intergenic | 30.0% | |
| TCTTCTGCAATTTATATCTC+AGG | - | chr1.2:9068395-9068414 | None:intergenic | 30.0% | |
| TGAAACTTAACATGCTAAAC+AGG | - | chr1.2:9068089-9068108 | None:intergenic | 30.0% | |
| TGAGTTCCTAAGTAAACATT+TGG | - | chr1.2:9066546-9066565 | None:intergenic | 30.0% | |
| TGTCAAGAATAAGAATGCAA+AGG | + | chr1.2:9066319-9066338 | MS.gene33200:CDS | 30.0% | |
| TTCTCCTTGAACTTTATCAA+GGG | - | chr1.2:9067132-9067151 | None:intergenic | 30.0% | |
| TTCTTCCCAAATGTTTACTT+AGG | + | chr1.2:9066537-9066556 | MS.gene33200:intron | 30.0% | |
| TTGTTCACATATATATCCAC+GGG | + | chr1.2:9069210-9069229 | MS.gene33200:intron | 30.0% | |
| TTTGCATTCTTATTCTTGAC+AGG | - | chr1.2:9066320-9066339 | None:intergenic | 30.0% | |
| ! | AATTTAACTTCTGTATCCTC+TGG | + | chr1.2:9069722-9069741 | MS.gene33200:intron | 30.0% |
| ! | ACATGTGATCTATTGATTAC+AGG | + | chr1.2:9067072-9067091 | MS.gene33200:intron | 30.0% |
| ! | AGCTTCCAGAAGTTTTTAAA+TGG | + | chr1.2:9069666-9069685 | MS.gene33200:intron | 30.0% |
| ! | CATAGTTCTACATTTGCAAT+AGG | - | chr1.2:9067201-9067220 | None:intergenic | 30.0% |
| ! | CATGTGATCTATTGATTACA+GGG | + | chr1.2:9067073-9067092 | MS.gene33200:intron | 30.0% |
| ! | CCACTTGTAAACATATTTTC+TGG | - | chr1.2:9068804-9068823 | None:intergenic | 30.0% |
| ! | GCTTCCAGAAGTTTTTAAAT+GGG | + | chr1.2:9069667-9069686 | MS.gene33200:intron | 30.0% |
| ! | TAAACCATCTACTGATTAGA+GGG | - | chr1.2:9069273-9069292 | None:intergenic | 30.0% |
| ! | TAAGATAAGAGTACACAACA+AGG | - | chr1.2:9067890-9067909 | None:intergenic | 30.0% |
| ! | TAAGGTTTCAAAGGAGATTT+TGG | - | chr1.2:9069045-9069064 | None:intergenic | 30.0% |
| ! | TAGTTTAAGAACCAAGTTGA+AGG | - | chr1.2:9066650-9066669 | None:intergenic | 30.0% |
| ! | TGATTTTCCTTTTCTTGAGT+TGG | + | chr1.2:9066188-9066207 | MS.gene33200:intron | 30.0% |
| ! | TTGAATGAGCGGTTTTTAAT+AGG | - | chr1.2:9066467-9066486 | None:intergenic | 30.0% |
| !! | AATGGGTTACTGTAAAAGTT+TGG | + | chr1.2:9069684-9069703 | MS.gene33200:intron | 30.0% |
| !! | ATGGAGTTGCTTTAAAAGTT+AGG | - | chr1.2:9067694-9067713 | None:intergenic | 30.0% |
| !! | TATGAGGATGTGTATTTTTG+TGG | + | chr1.2:9067253-9067272 | MS.gene33200:intron | 30.0% |
| !! | TGGTACTTTTAAGAGGATTA+AGG | - | chr1.2:9067280-9067299 | None:intergenic | 30.0% |
| AAAACCGCTCATTCAATGAT+CGG | + | chr1.2:9066471-9066490 | MS.gene33200:CDS | 35.0% | |
| AAATAATCAGTGCAGACTCA+AGG | - | chr1.2:9067915-9067934 | None:intergenic | 35.0% | |
| AAATGCTGTGTGAAAGTTCT+TGG | + | chr1.2:9069632-9069651 | MS.gene33200:intron | 35.0% | |
| AAGAACTTTCACACAGCATT+TGG | - | chr1.2:9069633-9069652 | None:intergenic | 35.0% | |
| AATAAGAATGCAAAGGTTGG+TGG | + | chr1.2:9066326-9066345 | MS.gene33200:CDS | 35.0% | |
| AATAATCAGTGCAGACTCAA+GGG | - | chr1.2:9067914-9067933 | None:intergenic | 35.0% | |
| AATTCAGAGTCTGATGGAAA+TGG | + | chr1.2:9069814-9069833 | MS.gene33200:CDS | 35.0% | |
| ACAGCATTTGGTATAAACGA+GGG | - | chr1.2:9069621-9069640 | None:intergenic | 35.0% | |
| AGAGAAACCAACTCAAGAAA+AGG | - | chr1.2:9066198-9066217 | None:intergenic | 35.0% | |
| AGAGTCTATCCAATATCCAT+TGG | + | chr1.2:9068683-9068702 | MS.gene33200:intron | 35.0% | |
| AGTGAAGAATGTCTTGTGAA+TGG | + | chr1.2:9070153-9070172 | MS.gene33200:CDS | 35.0% | |
| AGTTCTACATTTGCAATAGG+AGG | - | chr1.2:9067198-9067217 | None:intergenic | 35.0% | |
| ATGCAAAATCAGTTGGAAGA+AGG | - | chr1.2:9068217-9068236 | None:intergenic | 35.0% | |
| CAAAGTTGGAAAAGACAAAC+AGG | + | chr1.2:9066388-9066407 | MS.gene33200:CDS | 35.0% | |
| CACCTTTGGTATCATTATAC+AGG | + | chr1.2:9067417-9067436 | MS.gene33200:intron | 35.0% | |
| CAGTTAATAATTATCACCCG+TGG | - | chr1.2:9069229-9069248 | None:intergenic | 35.0% | |
| CATGCTAAACAGGCAATTAT+AGG | - | chr1.2:9068079-9068098 | None:intergenic | 35.0% | |
| CTAATCAGTAGATGGTTTAG+GGG | + | chr1.2:9069274-9069293 | MS.gene33200:intron | 35.0% | |
| CTCTAATCAGTAGATGGTTT+AGG | + | chr1.2:9069272-9069291 | MS.gene33200:intron | 35.0% | |
| CTGTATAATGATACCAAAGG+TGG | - | chr1.2:9067419-9067438 | None:intergenic | 35.0% | |
| CTGTATTTACAGTAACATGG+GGG | - | chr1.2:9066031-9066050 | None:intergenic | 35.0% | |
| CTTCCTAAGCTTTCTAATCT+CGG | - | chr1.2:9067669-9067688 | None:intergenic | 35.0% | |
| CTTCTCCTTGAACTTTATCA+AGG | - | chr1.2:9067133-9067152 | None:intergenic | 35.0% | |
| GAGTCTATCCAATATCCATT+GGG | + | chr1.2:9068684-9068703 | MS.gene33200:intron | 35.0% | |
| GATATCAACTATTCTCACCT+TGG | - | chr1.2:9067568-9067587 | None:intergenic | 35.0% | |
| GGATTTGTCTCATCTAATGT+GGG | - | chr1.2:9068783-9068802 | None:intergenic | 35.0% | |
| TAAGGTTGAGGAAAAGATTC+AGG | + | chr1.2:9067506-9067525 | MS.gene33200:CDS | 35.0% | |
| TAATCAGTAGATGGTTTAGG+GGG | + | chr1.2:9069275-9069294 | MS.gene33200:intron | 35.0% | |
| TCAACAAATTCAGAGTCTGA+TGG | + | chr1.2:9069808-9069827 | MS.gene33200:CDS | 35.0% | |
| TCTACATTAGTATTGTCCAG+AGG | - | chr1.2:9069741-9069760 | None:intergenic | 35.0% | |
| TCTCCTTGAACTTTATCAAG+GGG | - | chr1.2:9067131-9067150 | None:intergenic | 35.0% | |
| TGCAAAATCAGTTGGAAGAA+GGG | - | chr1.2:9068216-9068235 | None:intergenic | 35.0% | |
| TGGATTTGTCTCATCTAATG+TGG | - | chr1.2:9068784-9068803 | None:intergenic | 35.0% | |
| TGTAACAACAGAGTTTACCT+TGG | - | chr1.2:9066510-9066529 | None:intergenic | 35.0% | |
| TTCACAAGACATTCTTCACT+TGG | - | chr1.2:9070153-9070172 | None:intergenic | 35.0% | |
| TTGGTGAAAAACAGCAAAGT+TGG | + | chr1.2:9066374-9066393 | MS.gene33200:CDS | 35.0% | |
| ! | ACTTTTATAGGAGAGTCAAG+AGG | + | chr1.2:9067643-9067662 | MS.gene33200:intron | 35.0% |
| ! | CTAAACCATCTACTGATTAG+AGG | - | chr1.2:9069274-9069293 | None:intergenic | 35.0% |
| ! | GGTAATGACAGGGTATTTAT+GGG | - | chr1.2:9068291-9068310 | None:intergenic | 35.0% |
| ! | GGTTTTTAATAGGCTGTCTT+GGG | - | chr1.2:9066457-9066476 | None:intergenic | 35.0% |
| ! | TGGTAATGACAGGGTATTTA+TGG | - | chr1.2:9068292-9068311 | None:intergenic | 35.0% |
| !! | ATCAAAGGTTTGGTAATGAC+AGG | - | chr1.2:9068302-9068321 | None:intergenic | 35.0% |
| !! | ATTTGCTTTGTTCTAGGACA+AGG | + | chr1.2:9066247-9066266 | MS.gene33200:intron | 35.0% |
| !! | CTTACAAGCCGATTTTGTTA+GGG | + | chr1.2:9068624-9068643 | MS.gene33200:intron | 35.0% |
| !! | GATGGGTTGAGAATAGTTTA+GGG | - | chr1.2:9066721-9066740 | None:intergenic | 35.0% |
| !! | TCAAAGGTTTGGTAATGACA+GGG | - | chr1.2:9068301-9068320 | None:intergenic | 35.0% |
| !! | TGATGGGTTGAGAATAGTTT+AGG | - | chr1.2:9066722-9066741 | None:intergenic | 35.0% |
| !!! | CAAGGTACTGTTTTCTTCAT+TGG | - | chr1.2:9070079-9070098 | None:intergenic | 35.0% |
| !!! | TCAGTGTTGGTACTTTTAAG+AGG | - | chr1.2:9067287-9067306 | None:intergenic | 35.0% |
| AACTGAGGGACTAACTTGAT+GGG | - | chr1.2:9066738-9066757 | None:intergenic | 40.0% | |
| AACTGGAAACTCGTCTATGA+AGG | + | chr1.2:9066106-9066125 | MS.gene33200:CDS | 40.0% | |
| AAGTATACACACGCAATCAG+AGG | - | chr1.2:9067824-9067843 | None:intergenic | 40.0% | |
| AATCAGTAGATGGTTTAGGG+GGG | + | chr1.2:9069276-9069295 | MS.gene33200:intron | 40.0% | |
| ACACCACATCAAGAACTTTG+TGG | - | chr1.2:9069311-9069330 | None:intergenic | 40.0% | |
| ACAGAAACTGTTGTTCCAGA+TGG | + | chr1.2:9066047-9066066 | MS.gene33200:CDS | 40.0% | |
| AGCTGCTGAATTGGAAGAAT+TGG | - | chr1.2:9069977-9069996 | None:intergenic | 40.0% | |
| AGTATCTTTCTTTGTTGGCC+TGG | - | chr1.2:9070010-9070029 | None:intergenic | 40.0% | |
| ATATAACGCGCAGCAATCAA+AGG | - | chr1.2:9068317-9068336 | None:intergenic | 40.0% | |
| CAAATCTGAATGGCTCAGTT+TGG | - | chr1.2:9069132-9069151 | None:intergenic | 40.0% | |
| CACAGCATTTGGTATAAACG+AGG | - | chr1.2:9069622-9069641 | None:intergenic | 40.0% | |
| CAGCATTTGGTATAAACGAG+GGG | - | chr1.2:9069620-9069639 | None:intergenic | 40.0% | |
| CTAACCCTCTAATCAGTAGA+TGG | + | chr1.2:9069266-9069285 | MS.gene33200:intron | 40.0% | |
| CTAGCTTATCCAAAGCTACA+GGG | + | chr1.2:9070028-9070047 | MS.gene33200:CDS | 40.0% | |
| GCAAAATCAGTTGGAAGAAG+GGG | - | chr1.2:9068215-9068234 | None:intergenic | 40.0% | |
| TAACTGAGGGACTAACTTGA+TGG | - | chr1.2:9066739-9066758 | None:intergenic | 40.0% | |
| TAGCTTATCCAAAGCTACAG+GGG | + | chr1.2:9070029-9070048 | MS.gene33200:CDS | 40.0% | |
| TCACAAGGAAACTCCACTAA+AGG | + | chr1.2:9069883-9069902 | MS.gene33200:CDS | 40.0% | |
| TCAGCACATGCAAAATCAGT+TGG | - | chr1.2:9068224-9068243 | None:intergenic | 40.0% | |
| TCCATTGCCAACTTTCTATC+AGG | + | chr1.2:9067709-9067728 | MS.gene33200:CDS | 40.0% | |
| TCCTGAGAAAACCTTCAACT+TGG | + | chr1.2:9066636-9066655 | MS.gene33200:intron | 40.0% | |
| TCCTGATAGAAAGTTGGCAA+TGG | - | chr1.2:9067713-9067732 | None:intergenic | 40.0% | |
| TCGTCTATGAAGGAAATCGA+AGG | + | chr1.2:9066116-9066135 | MS.gene33200:CDS | 40.0% | |
| TCTTCACTTGGCTTATCTGA+AGG | - | chr1.2:9070141-9070160 | None:intergenic | 40.0% | |
| TCTTGTGAATGGTGACATAG+TGG | + | chr1.2:9070164-9070183 | MS.gene33200:CDS | 40.0% | |
| TGAGGAAAAGATTCAGGCAA+AGG | + | chr1.2:9067512-9067531 | MS.gene33200:CDS | 40.0% | |
| ! | ACTAGCTTATCCAAAGCTAC+AGG | + | chr1.2:9070027-9070046 | MS.gene33200:CDS | 40.0% |
| ! | ATCAATCAGTTGGAAAGCAC+TGG | + | chr1.2:9066083-9066102 | MS.gene33200:CDS | 40.0% |
| ! | CGGTTTTTAATAGGCTGTCT+TGG | - | chr1.2:9066458-9066477 | None:intergenic | 40.0% |
| ! | GAACAGTCAAGAGCACAAAA+GGG | + | chr1.2:9066293-9066312 | MS.gene33200:CDS | 40.0% |
| ! | GGTACTGTTTTCTTCATTGG+CGG | - | chr1.2:9070076-9070095 | None:intergenic | 40.0% |
| ! | GTACACTTTGTTTCCACCTT+TGG | + | chr1.2:9067403-9067422 | MS.gene33200:intron | 40.0% |
| ! | GTTTACCTCTCTCCTTTTCT+CGG | - | chr1.2:9067378-9067397 | None:intergenic | 40.0% |
| ! | TAGCTTGCAAGCAAAATCCA+AGG | + | chr1.2:9067548-9067567 | MS.gene33200:CDS | 40.0% |
| ! | TATGGATTCAGTTTCAGGTG+CGG | + | chr1.2:9067344-9067363 | MS.gene33200:CDS | 40.0% |
| ! | TCTTTTCCTCAACCTTAGTG+AGG | - | chr1.2:9067503-9067522 | None:intergenic | 40.0% |
| ! | TTCGTAGTGGCTTCTTTTGA+TGG | - | chr1.2:9069921-9069940 | None:intergenic | 40.0% |
| !! | ACCAAGTTGAAGGTTTTCTC+AGG | - | chr1.2:9066640-9066659 | None:intergenic | 40.0% |
| !! | CCTAACAAAATCGGCTTGTA+AGG | - | chr1.2:9068626-9068645 | None:intergenic | 40.0% |
| !! | CCTTACAAGCCGATTTTGTT+AGG | + | chr1.2:9068623-9068642 | MS.gene33200:intron | 40.0% |
| !! | CTTGATGATGTCCACCAAAA+CGG | + | chr1.2:9065951-9065970 | MS.gene33200:CDS | 40.0% |
| AAAGATTCAGGCAAAGGAGG+AGG | + | chr1.2:9067518-9067537 | MS.gene33200:CDS | 45.0% | |
| ACATCATCAAGTCCATCAGC+AGG | - | chr1.2:9065942-9065961 | None:intergenic | 45.0% | |
| AGAAGGGGAAGTGGAAAACA+AGG | - | chr1.2:9068200-9068219 | None:intergenic | 45.0% | |
| AGGATCAATGCCCAGATAAC+AGG | - | chr1.2:9069552-9069571 | None:intergenic | 45.0% | |
| AGGCCGAGATTAGAAAGCTT+AGG | + | chr1.2:9067663-9067682 | MS.gene33200:CDS | 45.0% | |
| AGGTTTGGCATCTTCAGTGT+TGG | - | chr1.2:9067300-9067319 | None:intergenic | 45.0% | |
| ATAGTCCTCACCTTACAAGC+TGG | + | chr1.2:9068826-9068845 | MS.gene33200:intron | 45.0% | |
| ATATCCAGTCCTTGGCACAA+GGG | + | chr1.2:9068742-9068761 | MS.gene33200:intron | 45.0% | |
| ATTAATCCCTTGCCTGCTGA+TGG | + | chr1.2:9065927-9065946 | MS.gene33200:CDS | 45.0% | |
| CAAACTTGCATTAACACCGC+TGG | - | chr1.2:9066357-9066376 | None:intergenic | 45.0% | |
| CACGACGAACCTTCTAATTC+TGG | + | chr1.2:9065978-9065997 | MS.gene33200:CDS | 45.0% | |
| CCATCCTCTCCAGAATTAGA+AGG | - | chr1.2:9065990-9066009 | None:intergenic | 45.0% | |
| CGACCACAAAGTTCTTGATG+TGG | + | chr1.2:9069305-9069324 | MS.gene33200:intron | 45.0% | |
| GGAAAAGATTCAGGCAAAGG+AGG | + | chr1.2:9067515-9067534 | MS.gene33200:CDS | 45.0% | |
| GGACCCCTTGATAAAGTTCA+AGG | + | chr1.2:9067125-9067144 | MS.gene33200:CDS | 45.0% | |
| GTGACTTCTTGATTGCATGC+AGG | + | chr1.2:9067864-9067883 | MS.gene33200:intron | 45.0% | |
| GTGGGGACACTTCCAAATTA+TGG | + | chr1.2:9067326-9067345 | MS.gene33200:CDS | 45.0% | |
| TCAGCAGGCAAGGGATTAAT+TGG | - | chr1.2:9065927-9065946 | None:intergenic | 45.0% | |
| TGCAAGCAAACACACACAGA+GGG | - | chr1.2:9067779-9067798 | None:intergenic | 45.0% | |
| TGCATTTGCTTGCTCAAGTG+TGG | + | chr1.2:9068336-9068355 | MS.gene33200:intron | 45.0% | |
| TGCTGTGTGAAAGTTCTTGG+TGG | + | chr1.2:9069635-9069654 | MS.gene33200:intron | 45.0% | |
| TGGTCCTTTCAGAAGCAAGT+CGG | - | chr1.2:9069957-9069976 | None:intergenic | 45.0% | |
| TGTTGCTCTGCCTCATAATG+CGG | + | chr1.2:9070113-9070132 | MS.gene33200:CDS | 45.0% | |
| TTGTGAGCAGTTCCTCACTA+AGG | + | chr1.2:9067488-9067507 | MS.gene33200:intron | 45.0% | |
| TTTCTCTTCCCCTGTAGCTT+TGG | - | chr1.2:9070040-9070059 | None:intergenic | 45.0% | |
| TTTGGTATAAACGAGGGGAG+CGG | - | chr1.2:9069615-9069634 | None:intergenic | 45.0% | |
| ! | AGGCAATTATAGGAGCACGT+GGG | - | chr1.2:9068069-9068088 | None:intergenic | 45.0% |
| ! | CAGCGGTGTTAATGCAAGTT+TGG | + | chr1.2:9066355-9066374 | MS.gene33200:CDS | 45.0% |
| ! | CCTTCTAATTCTGGAGAGGA+TGG | + | chr1.2:9065987-9066006 | MS.gene33200:CDS | 45.0% |
| ! | CGAACCTTCTAATTCTGGAG+AGG | + | chr1.2:9065983-9066002 | MS.gene33200:CDS | 45.0% |
| ! | GGAACAGTCAAGAGCACAAA+AGG | + | chr1.2:9066292-9066311 | MS.gene33200:CDS | 45.0% |
| ! | GGGGATTTTGCTCTTGTAGT+TGG | - | chr1.2:9069766-9069785 | None:intergenic | 45.0% |
| ! | TGCTCTAGATATCCAGTCCT+TGG | + | chr1.2:9068734-9068753 | MS.gene33200:intron | 45.0% |
| ! | TTCTTTGTTGGCCTGGATGT+AGG | - | chr1.2:9070003-9070022 | None:intergenic | 45.0% |
| !! | ACCTTACAAGCTGGTTTGCA+AGG | + | chr1.2:9068835-9068854 | MS.gene33200:intron | 45.0% |
| !! | AGAAGTGCCATTTGAGACAG+CGG | - | chr1.2:9066420-9066439 | None:intergenic | 45.0% |
| !! | CAAAATCGGCTTGTAAGGTG+AGG | - | chr1.2:9068621-9068640 | None:intergenic | 45.0% |
| !! | CCTTACAAGCTGGTTTGCAA+GGG | + | chr1.2:9068836-9068855 | MS.gene33200:intron | 45.0% |
| !! | CTGAACGAGAAAGTGTCACA+AGG | + | chr1.2:9069868-9069887 | MS.gene33200:CDS | 45.0% |
| !! | AATCATAATTAAAAAAAATA+AGG | - | chr1.2:9069063-9069082 | None:intergenic | 5.0% |
| !!! | TATTTTTTTTAATTATGATT+TGG | + | chr1.2:9069063-9069082 | MS.gene33200:intron | 5.0% |
| ACATCAGAAGACGCTGCTTC+AGG | - | chr1.2:9066970-9066989 | None:intergenic | 50.0% | |
| ACCTTCTTCAGCTCCACCTT+AGG | - | chr1.2:9067746-9067765 | None:intergenic | 50.0% | |
| ACGCGCAGCAATCAAAGGTT+TGG | - | chr1.2:9068312-9068331 | None:intergenic | 50.0% | |
| AGAAGCAAGTCGGGTAGGAA+GGG | - | chr1.2:9069947-9069966 | None:intergenic | 50.0% | |
| AGAGCAAAATCCCCCAAGCT+TGG | + | chr1.2:9069772-9069791 | MS.gene33200:CDS | 50.0% | |
| AGTCTTCTTCCGACCAAGCT+TGG | - | chr1.2:9069788-9069807 | None:intergenic | 50.0% | |
| ATCAAGTCCATCAGCAGGCA+AGG | - | chr1.2:9065937-9065956 | None:intergenic | 50.0% | |
| CAAAATCCCCCAAGCTTGGT+CGG | + | chr1.2:9069776-9069795 | MS.gene33200:CDS | 50.0% | |
| CCCTTGCAAACCAGCTTGTA+AGG | - | chr1.2:9068839-9068858 | None:intergenic | 50.0% | |
| CCTGCCGATCATTGAATGAG+CGG | - | chr1.2:9066478-9066497 | None:intergenic | 50.0% | |
| CGAAGGATCGAATGACAACG+TGG | + | chr1.2:9066133-9066152 | MS.gene33200:CDS | 50.0% | |
| CTTTCAGAAGCAAGTCGGGT+AGG | - | chr1.2:9069952-9069971 | None:intergenic | 50.0% | |
| GATATCCAGTCCTTGGCACA+AGG | + | chr1.2:9068741-9068760 | MS.gene33200:intron | 50.0% | |
| GCAAACCAGCTTGTAAGGTG+AGG | - | chr1.2:9068834-9068853 | None:intergenic | 50.0% | |
| GCAGGCTCCTGATAGAAAGT+TGG | - | chr1.2:9067719-9067738 | None:intergenic | 50.0% | |
| GCAGTTCCTCACTAAGGTTG+AGG | + | chr1.2:9067494-9067513 | MS.gene33200:intron | 50.0% | |
| GCATCATCCGCTGTCTCAAA+TGG | + | chr1.2:9066410-9066429 | MS.gene33200:CDS | 50.0% | |
| GGTCCTTTCAGAAGCAAGTC+GGG | - | chr1.2:9069956-9069975 | None:intergenic | 50.0% | |
| GTAGGAAGGGACTTTCGTAG+TGG | - | chr1.2:9069934-9069953 | None:intergenic | 50.0% | |
| GTCTTCTTCCGACCAAGCTT+GGG | - | chr1.2:9069787-9069806 | None:intergenic | 50.0% | |
| GTGCAAGCAAACACACACAG+AGG | - | chr1.2:9067780-9067799 | None:intergenic | 50.0% | |
| TCAAGTCCATCAGCAGGCAA+GGG | - | chr1.2:9065936-9065955 | None:intergenic | 50.0% | |
| TCAGTTGGAAGAAGGGGAAG+TGG | - | chr1.2:9068209-9068228 | None:intergenic | 50.0% | |
| TCCTAAGGTGGAGCTGAAGA+AGG | + | chr1.2:9067742-9067761 | MS.gene33200:CDS | 50.0% | |
| TCTGAAGGAGCCGCATTATG+AGG | - | chr1.2:9070126-9070145 | None:intergenic | 50.0% | |
| TCTTCTTCCGACCAAGCTTG+GGG | - | chr1.2:9069786-9069805 | None:intergenic | 50.0% | |
| TCTTGTGACAACACGAGCTG+AGG | - | chr1.2:9070201-9070220 | None:intergenic | 50.0% | |
| TGTAGGTGCAGCTGCTGAAT+TGG | - | chr1.2:9069986-9070005 | None:intergenic | 50.0% | |
| TGTGCTCTTGACTGTTCCGT+TGG | - | chr1.2:9066290-9066309 | None:intergenic | 50.0% | |
| TTCTTCAGCTCCACCTTAGG+AGG | - | chr1.2:9067743-9067762 | None:intergenic | 50.0% | |
| ! | CAGGCAATTATAGGAGCACG+TGG | - | chr1.2:9068070-9068089 | None:intergenic | 50.0% |
| ! | CTACCCGACTTGCTTCTGAA+AGG | + | chr1.2:9069950-9069969 | MS.gene33200:CDS | 50.0% |
| ! | CTGGTTTGCAAGGGTTGAGT+AGG | + | chr1.2:9068845-9068864 | MS.gene33200:intron | 50.0% |
| ! | GTTCGTCGTGAACACCGTTT+TGG | - | chr1.2:9065968-9065987 | None:intergenic | 50.0% |
| ! | TATCTAGAGCATGACCCGAG+TGG | - | chr1.2:9068725-9068744 | None:intergenic | 50.0% |
| !! | AAGGTTGGTGGTAGTTCCAG+CGG | + | chr1.2:9066338-9066357 | MS.gene33200:CDS | 50.0% |
| !! | CAGTTGGAAAGCACTGGAAC+TGG | + | chr1.2:9066089-9066108 | MS.gene33200:CDS | 50.0% |
| !! | TCAGGCTTTGAAGGTTGCTG+AGG | - | chr1.2:9066952-9066971 | None:intergenic | 50.0% |
| AATGCACCTCCCTTGTGCCA+AGG | - | chr1.2:9068754-9068773 | None:intergenic | 55.0% | |
| ACGAGCCGAGAAAAGGAGAG+AGG | + | chr1.2:9067370-9067389 | MS.gene33200:CDS | 55.0% | |
| AGATGCCAAACCTCGCAGAG+TGG | + | chr1.2:9067307-9067326 | MS.gene33200:CDS | 55.0% | |
| ATGCCAAACCTCGCAGAGTG+GGG | + | chr1.2:9067309-9067328 | MS.gene33200:CDS | 55.0% | |
| CAGAAGCAAGTCGGGTAGGA+AGG | - | chr1.2:9069948-9069967 | None:intergenic | 55.0% | |
| CCGCTCATTCAATGATCGGC+AGG | + | chr1.2:9066475-9066494 | MS.gene33200:CDS | 55.0% | |
| CTTCTTCCGACCAAGCTTGG+GGG | - | chr1.2:9069785-9069804 | None:intergenic | 55.0% | |
| GATGCCAAACCTCGCAGAGT+GGG | + | chr1.2:9067308-9067327 | MS.gene33200:CDS | 55.0% | |
| GCGGGAGACCCAATGGATAT+TGG | - | chr1.2:9068695-9068714 | None:intergenic | 55.0% | |
| GGTAGCTGCAGTTCTCGACA+AGG | + | chr1.2:9069835-9069854 | MS.gene33200:CDS | 55.0% | |
| TCCATTGGGTCTCCCGCTAT+CGG | + | chr1.2:9068698-9068717 | MS.gene33200:intron | 55.0% | |
| ! | CGTCGTGAACACCGTTTTGG+TGG | - | chr1.2:9065965-9065984 | None:intergenic | 55.0% |
| ! | GACGCTGCTTCAGGCTTTGA+AGG | - | chr1.2:9066961-9066980 | None:intergenic | 55.0% |
| ACCTCCCTTGTGCCAAGGAC+TGG | - | chr1.2:9068749-9068768 | None:intergenic | 60.0% | |
| AGCTCCACCTTAGGAGGAGC+AGG | - | chr1.2:9067737-9067756 | None:intergenic | 60.0% | |
| CAGCAGCTGCACCTACATCC+AGG | + | chr1.2:9069989-9070008 | MS.gene33200:CDS | 60.0% | |
| CCATTGGGTCTCCCGCTATC+GGG | + | chr1.2:9068699-9068718 | MS.gene33200:intron | 60.0% | |
| GCGGTGAACGAGCCGAGAAA+AGG | + | chr1.2:9067363-9067382 | MS.gene33200:CDS | 60.0% | |
| GGTATAAACGAGGGGAGCGG+AGG | - | chr1.2:9069612-9069631 | None:intergenic | 60.0% | |
| TCAGGAGCCTGCTCCTCCTA+AGG | + | chr1.2:9067727-9067746 | MS.gene33200:CDS | 60.0% | |
| TCCAGTCCTTGGCACAAGGG+AGG | + | chr1.2:9068745-9068764 | MS.gene33200:intron | 60.0% | |
| TCGGCAGGCTCAACTGTCCA+AGG | + | chr1.2:9066490-9066509 | MS.gene33200:CDS | 60.0% | |
| TGTCCCCACTCTGCGAGGTT+TGG | - | chr1.2:9067315-9067334 | None:intergenic | 60.0% | |
| GGAGCCTGCTCCTCCTAAGG+TGG | + | chr1.2:9067730-9067749 | MS.gene33200:CDS | 65.0% | |
| TCTCCCGCTATCGGGCCACT+CGG | + | chr1.2:9068707-9068726 | MS.gene33200:intron | 65.0% | |
| TGACCCGAGTGGCCCGATAG+CGG | - | chr1.2:9068714-9068733 | None:intergenic | 65.0% | |
| !! | CCCGATAGCGGGAGACCCAA+TGG | - | chr1.2:9068702-9068721 | None:intergenic | 65.0% |
| !! | GGAAGTGTCCCCACTCTGCG+AGG | - | chr1.2:9067320-9067339 | None:intergenic | 65.0% |
| CTCCCGCTATCGGGCCACTC+GGG | + | chr1.2:9068708-9068727 | MS.gene33200:intron | 70.0% | |
| GACCCGAGTGGCCCGATAGC+GGG | - | chr1.2:9068713-9068732 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 9065915 | 9070242 | 9065915 | ID=MS.gene33200 |
| chr1.2 | mRNA | 9065915 | 9070242 | 9065915 | ID=MS.gene33200.t1;Parent=MS.gene33200 |
| chr1.2 | exon | 9065915 | 9066181 | 9065915 | ID=MS.gene33200.t1.exon1;Parent=MS.gene33200.t1 |
| chr1.2 | CDS | 9065915 | 9066181 | 9065915 | ID=cds.MS.gene33200.t1;Parent=MS.gene33200.t1 |
| chr1.2 | exon | 9066263 | 9066511 | 9066263 | ID=MS.gene33200.t1.exon2;Parent=MS.gene33200.t1 |
| chr1.2 | CDS | 9066263 | 9066511 | 9066263 | ID=cds.MS.gene33200.t1;Parent=MS.gene33200.t1 |
| chr1.2 | exon | 9066955 | 9066995 | 9066955 | ID=MS.gene33200.t1.exon3;Parent=MS.gene33200.t1 |
| chr1.2 | CDS | 9066955 | 9066995 | 9066955 | ID=cds.MS.gene33200.t1;Parent=MS.gene33200.t1 |
| chr1.2 | exon | 9067094 | 9067165 | 9067094 | ID=MS.gene33200.t1.exon4;Parent=MS.gene33200.t1 |
| chr1.2 | CDS | 9067094 | 9067165 | 9067094 | ID=cds.MS.gene33200.t1;Parent=MS.gene33200.t1 |
| chr1.2 | exon | 9067295 | 9067391 | 9067295 | ID=MS.gene33200.t1.exon5;Parent=MS.gene33200.t1 |
| chr1.2 | CDS | 9067295 | 9067391 | 9067295 | ID=cds.MS.gene33200.t1;Parent=MS.gene33200.t1 |
| chr1.2 | exon | 9067498 | 9067569 | 9067498 | ID=MS.gene33200.t1.exon6;Parent=MS.gene33200.t1 |
| chr1.2 | CDS | 9067498 | 9067569 | 9067498 | ID=cds.MS.gene33200.t1;Parent=MS.gene33200.t1 |
| chr1.2 | exon | 9067653 | 9067763 | 9067653 | ID=MS.gene33200.t1.exon7;Parent=MS.gene33200.t1 |
| chr1.2 | CDS | 9067653 | 9067763 | 9067653 | ID=cds.MS.gene33200.t1;Parent=MS.gene33200.t1 |
| chr1.2 | exon | 9069760 | 9070242 | 9069760 | ID=MS.gene33200.t1.exon8;Parent=MS.gene33200.t1 |
| chr1.2 | CDS | 9069760 | 9070242 | 9069760 | ID=cds.MS.gene33200.t1;Parent=MS.gene33200.t1 |
| Gene Sequence |
| Protein sequence |
