Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67065.t1 | AFK45470.1 | 83.4 | 465 | 62 | 3 | 1 | 463 | 1 | 452 | 8.00E-166 | 593.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67065.t1 | Q94C48 | 49.1 | 265 | 124 | 7 | 101 | 360 | 88 | 346 | 1.6e-50 | 201.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67065.t1 | I3SYX8 | 83.4 | 465 | 62 | 3 | 1 | 463 | 1 | 452 | 5.8e-166 | 593.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056528 | MS.gene67065 | 0.805183 | 1.51E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene015987 | MS.gene67065 | PPI |
| MS.gene67065 | MS.gene015987 | PPI |
| MS.gene67065 | MS.gene072889 | PPI |
| MS.gene61699 | MS.gene67065 | PPI |
| MS.gene67065 | MS.gene61699 | PPI |
| MS.gene67065 | MS.gene014835 | PPI |
| MS.gene67065 | MS.gene60284 | PPI |
| MS.gene67065 | MS.gene32634 | PPI |
| MS.gene014835 | MS.gene67065 | PPI |
| MS.gene67065 | MS.gene33200 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67065.t1 | MTR_3g107050 | 88.627 | 466 | 37 | 3 | 1 | 463 | 1 | 453 | 0.0 | 805 |
| MS.gene67065.t1 | MTR_1g012530 | 50.737 | 475 | 199 | 11 | 1 | 461 | 2 | 455 | 8.39e-132 | 389 |
| MS.gene67065.t1 | MTR_1g012530 | 51.140 | 307 | 134 | 7 | 1 | 296 | 2 | 303 | 2.07e-86 | 268 |
| MS.gene67065.t1 | MTR_1g055085 | 44.554 | 202 | 84 | 5 | 220 | 417 | 233 | 410 | 6.81e-38 | 144 |
| MS.gene67065.t1 | MTR_7g106750 | 41.743 | 218 | 100 | 6 | 104 | 312 | 130 | 329 | 1.40e-36 | 139 |
| MS.gene67065.t1 | MTR_1g075310 | 60.870 | 92 | 36 | 0 | 222 | 313 | 217 | 308 | 1.26e-28 | 116 |
| MS.gene67065.t1 | MTR_1g080690 | 52.688 | 93 | 40 | 1 | 214 | 306 | 191 | 279 | 4.22e-21 | 95.1 |
| MS.gene67065.t1 | MTR_7g115310 | 56.566 | 99 | 39 | 1 | 213 | 311 | 207 | 301 | 4.66e-20 | 94.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67065.t1 | AT4G32330 | 47.518 | 282 | 138 | 6 | 83 | 360 | 70 | 345 | 2.28e-69 | 227 |
| MS.gene67065.t1 | AT4G32330 | 47.703 | 283 | 137 | 7 | 83 | 360 | 70 | 346 | 2.72e-68 | 224 |
| MS.gene67065.t1 | AT4G32330 | 47.703 | 283 | 137 | 7 | 83 | 360 | 70 | 346 | 2.72e-68 | 224 |
| MS.gene67065.t1 | AT4G32330 | 47.703 | 283 | 137 | 7 | 83 | 360 | 70 | 346 | 2.72e-68 | 224 |
| MS.gene67065.t1 | AT2G25480 | 45.679 | 243 | 128 | 3 | 135 | 376 | 99 | 338 | 6.83e-58 | 196 |
| MS.gene67065.t1 | AT2G25480 | 45.679 | 243 | 129 | 3 | 135 | 376 | 99 | 339 | 1.11e-57 | 196 |
| MS.gene67065.t1 | AT2G35880 | 72.816 | 103 | 27 | 1 | 211 | 313 | 236 | 337 | 8.00e-42 | 154 |
| MS.gene67065.t1 | AT2G35880 | 72.816 | 103 | 27 | 1 | 211 | 313 | 236 | 337 | 8.00e-42 | 154 |
| MS.gene67065.t1 | AT2G35880 | 72.816 | 103 | 27 | 1 | 211 | 313 | 236 | 337 | 8.00e-42 | 154 |
| MS.gene67065.t1 | AT3G23090 | 54.902 | 102 | 46 | 0 | 208 | 309 | 181 | 282 | 2.64e-25 | 106 |
| MS.gene67065.t1 | AT3G23090 | 54.902 | 102 | 46 | 0 | 208 | 309 | 182 | 283 | 2.84e-25 | 106 |
| MS.gene67065.t1 | AT3G23090 | 54.902 | 102 | 46 | 0 | 208 | 309 | 217 | 318 | 5.35e-25 | 106 |
| MS.gene67065.t1 | AT3G23090 | 52.830 | 106 | 46 | 1 | 208 | 309 | 181 | 286 | 2.07e-24 | 104 |
| MS.gene67065.t1 | AT3G23090 | 52.830 | 106 | 46 | 1 | 208 | 309 | 217 | 322 | 4.28e-24 | 103 |
| MS.gene67065.t1 | AT3G04630 | 52.747 | 91 | 41 | 1 | 218 | 306 | 122 | 212 | 1.28e-22 | 97.8 |
| MS.gene67065.t1 | AT3G04630 | 52.747 | 91 | 41 | 1 | 218 | 306 | 126 | 216 | 1.39e-22 | 97.8 |
| MS.gene67065.t1 | AT5G28646 | 47.899 | 119 | 54 | 3 | 214 | 328 | 80 | 194 | 1.49e-22 | 95.5 |
| MS.gene67065.t1 | AT3G04630 | 52.747 | 91 | 41 | 1 | 218 | 306 | 121 | 211 | 1.53e-22 | 97.8 |
| MS.gene67065.t1 | AT5G28646 | 47.899 | 119 | 54 | 3 | 214 | 328 | 84 | 198 | 1.56e-22 | 95.5 |
| MS.gene67065.t1 | AT5G28646 | 47.899 | 119 | 54 | 3 | 214 | 328 | 84 | 198 | 1.56e-22 | 95.5 |
| MS.gene67065.t1 | AT1G70950 | 69.841 | 63 | 19 | 0 | 221 | 283 | 328 | 390 | 2.07e-22 | 100 |
| MS.gene67065.t1 | AT1G54460 | 47.863 | 117 | 56 | 2 | 198 | 313 | 145 | 257 | 7.60e-22 | 96.7 |
Find 97 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATCTTCTTTGTGGTTTCTT+TGG | 0.168066 | 3.4:-93201118 | None:intergenic |
| TTGGATGAACTGATCCTTTC+AGG | 0.194545 | 3.4:-93201160 | None:intergenic |
| AGACAAACCACAACTCATTT+TGG | 0.224152 | 3.4:+93201414 | MS.gene67065:CDS |
| TGTGGTTTCTTTGGCTGAAC+AGG | 0.226403 | 3.4:-93201109 | None:intergenic |
| GCCTCTTAATCTCAGCTTCC+TGG | 0.282090 | 3.4:-93199562 | None:intergenic |
| GAACCCCTTGATAATCTTCC+AGG | 0.318461 | 3.4:+93198677 | MS.gene67065:CDS |
| ATGGAAGAACAAGGATTAAA+TGG | 0.328736 | 3.4:+93197967 | MS.gene67065:CDS |
| GAAGTCATATGAAGACTTCT+AGG | 0.332240 | 3.4:-93198198 | None:intergenic |
| ACCAGGAGCCTACTCCTTCT+AGG | 0.337669 | 3.4:+93199630 | MS.gene67065:CDS |
| GAACAAACACTACACCAAAA+TGG | 0.342296 | 3.4:+93197823 | MS.gene67065:CDS |
| GTTGGGACAATGCCAACTTA+TGG | 0.342732 | 3.4:+93199235 | MS.gene67065:CDS |
| TATCAATGATAATTTGTCTA+TGG | 0.352840 | 3.4:+93197948 | MS.gene67065:CDS |
| AGTTGAAATCGTTGATGAAA+TGG | 0.373626 | 3.4:+93198119 | MS.gene67065:CDS |
| AAACAAACTGCACTGTCTAA+TGG | 0.379381 | 3.4:+93197922 | MS.gene67065:CDS |
| TGCTTAATGCTATCCTGCTA+TGG | 0.379385 | 3.4:-93201446 | None:intergenic |
| CTCGACAGCCGGTTAAGAAC+AGG | 0.385189 | 3.4:+93198307 | MS.gene67065:CDS |
| TTGACTGCCCTGTTCTTAAC+CGG | 0.385934 | 3.4:-93198315 | None:intergenic |
| CTTTCTCATCAAGACTTAAA+CGG | 0.397130 | 3.4:-93201054 | None:intergenic |
| TTCTTCAACTCCACCCTAGA+AGG | 0.399718 | 3.4:-93199644 | None:intergenic |
| GTTGTTTATGAACACCATTT+TGG | 0.402579 | 3.4:-93197837 | None:intergenic |
| AGTCCGTGCAGTTGCTGAAT+TGG | 0.411034 | 3.4:-93201179 | None:intergenic |
| AATTGAGATTCTGCTACATC+TGG | 0.413515 | 3.4:-93201370 | None:intergenic |
| TGAAGCAGCTGCAGCTATTG+AGG | 0.421562 | 3.4:+93201294 | MS.gene67065:CDS |
| GCTTAATGCTATCCTGCTAT+GGG | 0.424527 | 3.4:-93201445 | None:intergenic |
| AAGCTGAGATTAAGAGGCTT+AGG | 0.426472 | 3.4:+93199567 | MS.gene67065:CDS |
| AACTGCACGGACTTCATCTA+AGG | 0.429060 | 3.4:+93201189 | MS.gene67065:CDS |
| TTTGGTGTAGTGTTTGTTCA+AGG | 0.434141 | 3.4:-93197819 | None:intergenic |
| TTCAGTTGTTACACTAGATA+AGG | 0.435015 | 3.4:-93201233 | None:intergenic |
| GGAGGGAGAGATCTTCTTTG+TGG | 0.439601 | 3.4:-93201127 | None:intergenic |
| ACAACTGTTTAATTCAGAAC+AGG | 0.442289 | 3.4:+93197858 | MS.gene67065:CDS |
| TGTCCCAACTCTACGAGGTT+TGG | 0.442849 | 3.4:-93199221 | None:intergenic |
| TTTCTCTTCCCTTGTTGCAA+TGG | 0.452310 | 3.4:-93201269 | None:intergenic |
| TTGATGAAATGGAGAAATCT+AGG | 0.454744 | 3.4:+93198130 | MS.gene67065:CDS |
| AGGATTAAATGGCAAAATAG+AGG | 0.462425 | 3.4:+93197978 | MS.gene67065:CDS |
| GTAGCATCTTCTGTTTCAAA+TGG | 0.464133 | 3.4:+93198261 | MS.gene67065:CDS |
| GCCAGGAAGCTGAGATTAAG+AGG | 0.465254 | 3.4:+93199561 | MS.gene67065:CDS |
| AACAGGGCTAATTCCTTTAG+TGG | 0.473778 | 3.4:-93201092 | None:intergenic |
| TTCTAGGGTGGAGTTGAAGA+AGG | 0.474020 | 3.4:+93199646 | MS.gene67065:CDS |
| ACTCTTCTTACGACCAAGCT+TGG | 0.479893 | 3.4:-93200978 | None:intergenic |
| GGATTCAGTTAACACTTCAC+TGG | 0.481211 | 3.4:+93197786 | MS.gene67065:CDS |
| CTCTTCTTACGACCAAGCTT+GGG | 0.483203 | 3.4:-93200977 | None:intergenic |
| ATGCCAAACCTCGTAGAGTT+GGG | 0.490023 | 3.4:+93199218 | MS.gene67065:CDS |
| ACAGGGCTAATTCCTTTAGT+GGG | 0.491541 | 3.4:-93201091 | None:intergenic |
| TTCCCTTGTTGCAATGGACA+AGG | 0.498349 | 3.4:-93201263 | None:intergenic |
| CCAGGAGCCTACTCCTTCTA+GGG | 0.502058 | 3.4:+93199631 | MS.gene67065:CDS |
| GGTTTGGCATCTTCTGATGT+AGG | 0.503553 | 3.4:-93199205 | None:intergenic |
| TTGAAACTGAATCCATAAGT+TGG | 0.507092 | 3.4:-93199247 | None:intergenic |
| GTGGTTTCTTTGGCTGAACA+GGG | 0.512858 | 3.4:-93201108 | None:intergenic |
| GATGCCAAACCTCGTAGAGT+TGG | 0.513113 | 3.4:+93199217 | MS.gene67065:CDS |
| TCCTGGTAGAAGCTTGGCAT+TGG | 0.514744 | 3.4:-93199614 | None:intergenic |
| ATATGAAGACTTCTAGGACT+TGG | 0.516716 | 3.4:-93198192 | None:intergenic |
| TCTCAGAATAACCCCACTAA+AGG | 0.516819 | 3.4:+93201079 | MS.gene67065:CDS |
| TCCAATGCCAAGCTTCTACC+AGG | 0.517321 | 3.4:+93199613 | MS.gene67065:CDS |
| CCCTAGAAGGAGTAGGCTCC+TGG | 0.521015 | 3.4:-93199631 | None:intergenic |
| AAGGATTCATGCGAAGGAAG+TGG | 0.521232 | 3.4:+93199416 | MS.gene67065:CDS |
| AGACTCTCATCCTCGACAGC+CGG | 0.534706 | 3.4:+93198296 | MS.gene67065:CDS |
| TTGGTACAAGAACCCATAGC+AGG | 0.540838 | 3.4:+93201433 | MS.gene67065:CDS |
| AGAAAGAACAAAGACGGAAA+AGG | 0.541738 | 3.4:+93198225 | MS.gene67065:CDS |
| CACCTTGTCCATTGCAACAA+GGG | 0.541747 | 3.4:+93201261 | MS.gene67065:CDS |
| TCTGGCTCTATGTTCTGAGA+TGG | 0.545911 | 3.4:-93201352 | None:intergenic |
| GTAGCAGAATCTCAATTGAA+TGG | 0.549239 | 3.4:+93201376 | MS.gene67065:CDS |
| CTGTTCTTAACCGGCTGTCG+AGG | 0.550219 | 3.4:-93198306 | None:intergenic |
| GCGAGCTGAGAGAAGAAAAG+AGG | 0.553578 | 3.4:+93199279 | MS.gene67065:CDS |
| AGAGCAAAATCTCCCAAGCT+TGG | 0.555915 | 3.4:+93200965 | MS.gene67065:CDS |
| GTAGGCTCCTGGTAGAAGCT+TGG | 0.558222 | 3.4:-93199620 | None:intergenic |
| TCTTGTACCAAAATGAGTTG+TGG | 0.564689 | 3.4:-93201421 | None:intergenic |
| CCACCTTGTCCATTGCAACA+AGG | 0.567508 | 3.4:+93201260 | MS.gene67065:CDS |
| CAAGCTGACTCGACTGTCCA+AGG | 0.578035 | 3.4:+93198341 | MS.gene67065:CDS |
| GGTTCTTTCTTTATTAAGCG+TGG | 0.580191 | 3.4:-93198659 | None:intergenic |
| GGATTAAATGGCAAAATAGA+GGG | 0.583012 | 3.4:+93197979 | MS.gene67065:CDS |
| AACACTTCACTGGAAGATGA+TGG | 0.583650 | 3.4:+93197796 | MS.gene67065:CDS |
| TTTACTCTAAGCTTGAGGAA+AGG | 0.592432 | 3.4:+93199397 | MS.gene67065:CDS |
| CGGAAAAGGTGAAGAGGCTG+CGG | 0.593404 | 3.4:+93198239 | MS.gene67065:CDS |
| CTCCTCGACTGACTCCTGAA+AGG | 0.594114 | 3.4:+93201146 | MS.gene67065:CDS |
| AGTTGTTACACTAGATAAGG+AGG | 0.597207 | 3.4:-93201230 | None:intergenic |
| TAGAAGTCTTCATATGACTT+CGG | 0.599550 | 3.4:+93198200 | MS.gene67065:CDS |
| TGAGGAAAGGATTCATGCGA+AGG | 0.601101 | 3.4:+93199410 | MS.gene67065:CDS |
| CTTTCAGGAGTCAGTCGAGG+AGG | 0.604733 | 3.4:-93201145 | None:intergenic |
| TTTCAGGAGTCAGTCGAGGA+GGG | 0.609189 | 3.4:-93201144 | None:intergenic |
| CAAAGACGGAAAAGGTGAAG+AGG | 0.614474 | 3.4:+93198233 | MS.gene67065:CDS |
| TCGAGGATGAGAGTCTAAAG+TGG | 0.615745 | 3.4:-93198289 | None:intergenic |
| CAGGGCTAATTCCTTTAGTG+GGG | 0.617483 | 3.4:-93201090 | None:intergenic |
| TCGACAGCCGGTTAAGAACA+GGG | 0.621749 | 3.4:+93198308 | MS.gene67065:CDS |
| GATTCATGCGAAGGAAGTGG+AGG | 0.623695 | 3.4:+93199419 | MS.gene67065:CDS |
| AACTCCACCCTAGAAGGAGT+AGG | 0.629124 | 3.4:-93199638 | None:intergenic |
| TCGGTGAGAAAGAACAAAGA+CGG | 0.640205 | 3.4:+93198219 | MS.gene67065:CDS |
| CATCCAATTCAGCAACTGCA+CGG | 0.641669 | 3.4:+93201176 | MS.gene67065:CDS |
| GCCTTGTCTGATGAGACAAG+TGG | 0.643159 | 3.4:+93201325 | MS.gene67065:CDS |
| ATCCTTTCAGGAGTCAGTCG+AGG | 0.644922 | 3.4:-93201148 | None:intergenic |
| TCCACTTGTCTCATCAGACA+AGG | 0.648448 | 3.4:-93201326 | None:intergenic |
| GGAGCCTACTCCTTCTAGGG+TGG | 0.650646 | 3.4:+93199634 | MS.gene67065:CDS |
| GGCATTGTCCCAACTCTACG+AGG | 0.655109 | 3.4:-93199226 | None:intergenic |
| CTGTTTAATTCAGAACAGGA+TGG | 0.660275 | 3.4:+93197862 | MS.gene67065:CDS |
| CCTTGTTGCAATGGACAAGG+TGG | 0.666267 | 3.4:-93201260 | None:intergenic |
| TGCACGGACTTCATCTAAGG+CGG | 0.675302 | 3.4:+93201192 | MS.gene67065:CDS |
| TTTCCTGGAAGATTATCAAG+GGG | 0.677776 | 3.4:-93198680 | None:intergenic |
| AATTTGTCTATGGAAGAACA+AGG | 0.717987 | 3.4:+93197958 | MS.gene67065:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAATAAAAACAATAAAAAA+AGG | - | chr3.4:93198725-93198744 | None:intergenic | 10.0% |
| !!! | ATGTATTTTGAAATTATTAT+AGG | + | chr3.4:93198089-93198108 | MS.gene67065:intron | 10.0% |
| !! | AGATCAATAATATAATATGA+AGG | - | chr3.4:93200733-93200752 | None:intergenic | 15.0% |
| !! | TAATAATTTCAAAATACATG+AGG | - | chr3.4:93198088-93198107 | None:intergenic | 15.0% |
| !!! | AATTTTTAAAATTAGAGAGA+AGG | + | chr3.4:93199064-93199083 | MS.gene67065:intron | 15.0% |
| !!! | ATTTTTAAAATTAGAGAGAA+GGG | + | chr3.4:93199065-93199084 | MS.gene67065:intron | 15.0% |
| !!! | TGTAAATTAGTTTACAATTA+TGG | + | chr3.4:93199150-93199169 | MS.gene67065:intron | 15.0% |
| !! | AAAACACAAACCAAATTTAA+AGG | - | chr3.4:93200223-93200242 | None:intergenic | 20.0% |
| !! | AACTATGATTTCAATTTGAA+TGG | + | chr3.4:93200105-93200124 | MS.gene67065:intron | 20.0% |
| !! | AATCATAATATATGATAGCT+AGG | + | chr3.4:93199473-93199492 | MS.gene67065:intron | 20.0% |
| !! | AATTTGAACAAACATTGTTA+GGG | - | chr3.4:93198997-93199016 | None:intergenic | 20.0% |
| !! | AGTTTACAATTATGGTTTAA+TGG | + | chr3.4:93199158-93199177 | MS.gene67065:intron | 20.0% |
| !! | ATATATTATGATTATCACCT+TGG | - | chr3.4:93199466-93199485 | None:intergenic | 20.0% |
| !! | ATATCACAATAGTAAGTTTA+TGG | + | chr3.4:93198785-93198804 | MS.gene67065:intron | 20.0% |
| !! | TAATTTGAACAAACATTGTT+AGG | - | chr3.4:93198998-93199017 | None:intergenic | 20.0% |
| !! | TATCACAATAGTAAGTTTAT+GGG | + | chr3.4:93198786-93198805 | MS.gene67065:intron | 20.0% |
| !! | TGTAATGAAAATTATAGTGT+TGG | + | chr3.4:93198455-93198474 | MS.gene67065:intron | 20.0% |
| !! | TTCCTATAAAAAGAAATCAA+AGG | - | chr3.4:93199540-93199559 | None:intergenic | 20.0% |
| !!! | AAACAATGTTAATGTTTTCA+AGG | + | chr3.4:93198002-93198021 | MS.gene67065:CDS | 20.0% |
| !!! | AGTTTCTTCTTTAATCTTTT+TGG | + | chr3.4:93198429-93198448 | MS.gene67065:intron | 20.0% |
| !!! | GTAATCTGTCTAATTATTTT+CGG | + | chr3.4:93199734-93199753 | MS.gene67065:intron | 20.0% |
| !!! | GTCTAAAAAAGTTCATATTT+TGG | + | chr3.4:93199366-93199385 | MS.gene67065:intron | 20.0% |
| !!! | TAAAAAAGTTCATATTTTGG+TGG | + | chr3.4:93199369-93199388 | MS.gene67065:intron | 20.0% |
| !!! | TATCAATGATAATTTGTCTA+TGG | + | chr3.4:93197948-93197967 | MS.gene67065:CDS | 20.0% |
| !!! | TATCTGATTCTAAAAATGAA+TGG | + | chr3.4:93200315-93200334 | MS.gene67065:intron | 20.0% |
| !!! | TTAGATTTCAAAATTTGTTC+AGG | - | chr3.4:93200672-93200691 | None:intergenic | 20.0% |
| !!! | TTTGAAATTATTATAGGATG+AGG | + | chr3.4:93198095-93198114 | MS.gene67065:intron | 20.0% |
| !!! | TTTTCGGTTTTTTTAACTAT+AGG | + | chr3.4:93199750-93199769 | MS.gene67065:intron | 20.0% |
| ! | AAAGATTAAAGAAGAAACTG+AGG | - | chr3.4:93198428-93198447 | None:intergenic | 25.0% |
| ! | AAATATCATTCAAGCATCTA+AGG | - | chr3.4:93198825-93198844 | None:intergenic | 25.0% |
| ! | AATATCATTCAAGCATCTAA+GGG | - | chr3.4:93198824-93198843 | None:intergenic | 25.0% |
| ! | ATGCAAATTGTTTCATACAT+TGG | - | chr3.4:93198553-93198572 | None:intergenic | 25.0% |
| ! | ATTGCAACTTATTGAATACA+GGG | + | chr3.4:93198625-93198644 | MS.gene67065:intron | 25.0% |
| ! | ATTGCTGTATAAATACAACT+GGG | - | chr3.4:93200587-93200606 | None:intergenic | 25.0% |
| ! | GAATGAGTTTATATAATGAG+TGG | - | chr3.4:93199998-93200017 | None:intergenic | 25.0% |
| ! | GTGATTTATGCATATCTTAT+GGG | + | chr3.4:93199092-93199111 | MS.gene67065:intron | 25.0% |
| ! | TGTGATTTATGCATATCTTA+TGG | + | chr3.4:93199091-93199110 | MS.gene67065:intron | 25.0% |
| ! | TTAACTCAATAAGCTTCTTA+GGG | + | chr3.4:93198888-93198907 | MS.gene67065:intron | 25.0% |
| ! | TTTAACTCAATAAGCTTCTT+AGG | + | chr3.4:93198887-93198906 | MS.gene67065:intron | 25.0% |
| ! | TTTCTGTTTACGTACATATA+GGG | + | chr3.4:93199673-93199692 | MS.gene67065:intron | 25.0% |
| !! | GATATTTAAAGTTAGCTAGT+TGG | + | chr3.4:93200499-93200518 | MS.gene67065:intron | 25.0% |
| !! | TAAACAACAAAGTTTTACCT+TGG | - | chr3.4:93198361-93198380 | None:intergenic | 25.0% |
| !!! | ACACCAGTTGATATTTTTAT+GGG | + | chr3.4:93200705-93200724 | MS.gene67065:intron | 25.0% |
| !!! | GACCTTTGATTTCTTTTTAT+AGG | + | chr3.4:93199535-93199554 | MS.gene67065:intron | 25.0% |
| !!! | TAAAACTTTGTTGTTTACAC+AGG | + | chr3.4:93198364-93198383 | MS.gene67065:intron | 25.0% |
| !!! | TACACCAGTTGATATTTTTA+TGG | + | chr3.4:93200704-93200723 | MS.gene67065:intron | 25.0% |
| !!! | TAGGACTTATAAATGGATTA+AGG | - | chr3.4:93199189-93199208 | None:intergenic | 25.0% |
| AACTTTGTTGAAAGAAAACC+AGG | - | chr3.4:93200786-93200805 | None:intergenic | 30.0% | |
| AATTGAAATCCTTGAGCATT+TGG | + | chr3.4:93200916-93200935 | MS.gene67065:intron | 30.0% | |
| AATTTGTCTATGGAAGAACA+AGG | + | chr3.4:93197958-93197977 | MS.gene67065:CDS | 30.0% | |
| ACAACTGTTTAATTCAGAAC+AGG | + | chr3.4:93197858-93197877 | MS.gene67065:CDS | 30.0% | |
| AGGATTAAATGGCAAAATAG+AGG | + | chr3.4:93197978-93197997 | MS.gene67065:CDS | 30.0% | |
| AGGTCATCTATAAAATGACA+AGG | + | chr3.4:93198958-93198977 | MS.gene67065:intron | 30.0% | |
| ATGGAAGAACAAGGATTAAA+TGG | + | chr3.4:93197967-93197986 | MS.gene67065:CDS | 30.0% | |
| ATTCCATGGTTAAGAATGAT+AGG | + | chr3.4:93199969-93199988 | MS.gene67065:intron | 30.0% | |
| ATTGTAATTGCTCAAGAACT+TGG | + | chr3.4:93200645-93200664 | MS.gene67065:intron | 30.0% | |
| ATTTATGCATATCTTATGGG+AGG | + | chr3.4:93199095-93199114 | MS.gene67065:intron | 30.0% | |
| CTTTAAATATCTCCTCTAAC+TGG | - | chr3.4:93200490-93200509 | None:intergenic | 30.0% | |
| CTTTCTCATCAAGACTTAAA+CGG | - | chr3.4:93201057-93201076 | None:intergenic | 30.0% | |
| GATTGCAACTTATTGAATAC+AGG | + | chr3.4:93198624-93198643 | MS.gene67065:intron | 30.0% | |
| GATTGCTGTATAAATACAAC+TGG | - | chr3.4:93200588-93200607 | None:intergenic | 30.0% | |
| GGATTAAATGGCAAAATAGA+GGG | + | chr3.4:93197979-93197998 | MS.gene67065:CDS | 30.0% | |
| GTTTCTGTTTACGTACATAT+AGG | + | chr3.4:93199672-93199691 | MS.gene67065:intron | 30.0% | |
| TAGAAGTCTTCATATGACTT+CGG | + | chr3.4:93198200-93198219 | MS.gene67065:CDS | 30.0% | |
| TCTGATGTAGGACTTATAAA+TGG | - | chr3.4:93199196-93199215 | None:intergenic | 30.0% | |
| TGCTAACTCAAAAAAGTTCA+TGG | - | chr3.4:93200877-93200896 | None:intergenic | 30.0% | |
| TTATTCTTCTTACTTGTGAG+TGG | + | chr3.4:93198738-93198757 | MS.gene67065:intron | 30.0% | |
| TTCAGTTGTTACACTAGATA+AGG | - | chr3.4:93201236-93201255 | None:intergenic | 30.0% | |
| TTGAAACTGAATCCATAAGT+TGG | - | chr3.4:93199250-93199269 | None:intergenic | 30.0% | |
| TTGATGAAATGGAGAAATCT+AGG | + | chr3.4:93198130-93198149 | MS.gene67065:CDS | 30.0% | |
| TTGCTGTATAAATACAACTG+GGG | - | chr3.4:93200586-93200605 | None:intergenic | 30.0% | |
| TTGTAATTGCTCAAGAACTT+GGG | + | chr3.4:93200646-93200665 | MS.gene67065:intron | 30.0% | |
| TTTATGCATATCTTATGGGA+GGG | + | chr3.4:93199096-93199115 | MS.gene67065:intron | 30.0% | |
| TTTCCTTTGAATAAGCTTGT+AGG | + | chr3.4:93199344-93199363 | MS.gene67065:intron | 30.0% | |
| ! | AGTTGAAATCGTTGATGAAA+TGG | + | chr3.4:93198119-93198138 | MS.gene67065:CDS | 30.0% |
| ! | ATAGGCAATGTATTTTCTGT+TGG | + | chr3.4:93199768-93199787 | MS.gene67065:intron | 30.0% |
| ! | GTTGTTTATGAACACCATTT+TGG | - | chr3.4:93197840-93197859 | None:intergenic | 30.0% |
| ! | TGCTGTTTAAACTTGTCATT+AGG | + | chr3.4:93200821-93200840 | MS.gene67065:intron | 30.0% |
| ! | TGCTTGAATGATATTTTCTG+TGG | + | chr3.4:93198829-93198848 | MS.gene67065:intron | 30.0% |
| ! | TTTCTTTTTATAGGAAAGCC+AGG | + | chr3.4:93199544-93199563 | MS.gene67065:intron | 30.0% |
| ! | TTTTCCACTTATCTAGACAT+AGG | + | chr3.4:93200361-93200380 | MS.gene67065:intron | 30.0% |
| ! | TTTTCCTGGAAGATTATCAA+GGG | - | chr3.4:93198684-93198703 | None:intergenic | 30.0% |
| !! | TAGAAAGTGATTCTAAAACC+TGG | + | chr3.4:93200765-93200784 | MS.gene67065:intron | 30.0% |
| !!! | CATTTAATCTGGTTTTACTC+TGG | + | chr3.4:93200398-93200417 | MS.gene67065:intron | 30.0% |
| !!! | CATTTTGATTAGATCTGCAT+AGG | - | chr3.4:93200610-93200629 | None:intergenic | 30.0% |
| AAACAAACTGCACTGTCTAA+TGG | + | chr3.4:93197922-93197941 | MS.gene67065:CDS | 35.0% | |
| AATTGAGATTCTGCTACATC+TGG | - | chr3.4:93201373-93201392 | None:intergenic | 35.0% | |
| AGAAAGAACAAAGACGGAAA+AGG | + | chr3.4:93198225-93198244 | MS.gene67065:CDS | 35.0% | |
| AGACCTACAAGCTTATTCAA+AGG | - | chr3.4:93199350-93199369 | None:intergenic | 35.0% | |
| AGACCTATCATTCTTAACCA+TGG | - | chr3.4:93199975-93199994 | None:intergenic | 35.0% | |
| AGATGGATATCAATGAAAGC+GGG | - | chr3.4:93200196-93200215 | None:intergenic | 35.0% | |
| AGTTGTTACACTAGATAAGG+AGG | - | chr3.4:93201233-93201252 | None:intergenic | 35.0% | |
| ATGACCTACAATTAGCAGAA+GGG | - | chr3.4:93198945-93198964 | None:intergenic | 35.0% | |
| ATTAGACAGATTACACACAG+CGG | - | chr3.4:93199728-93199747 | None:intergenic | 35.0% | |
| ATTATTACTTGCTTCTCCCT+TGG | + | chr3.4:93199308-93199327 | MS.gene67065:intron | 35.0% | |
| CAACATTCAAGCAAAAACCA+AGG | + | chr3.4:93199446-93199465 | MS.gene67065:CDS | 35.0% | |
| CAGATGGATATCAATGAAAG+CGG | - | chr3.4:93200197-93200216 | None:intergenic | 35.0% | |
| CCAAATTTAAAGGTTCCAGA+TGG | - | chr3.4:93200213-93200232 | None:intergenic | 35.0% | |
| CTGTTTAATTCAGAACAGGA+TGG | + | chr3.4:93197862-93197881 | MS.gene67065:CDS | 35.0% | |
| GAACAAACACTACACCAAAA+TGG | + | chr3.4:93197823-93197842 | MS.gene67065:CDS | 35.0% | |
| GAAGTCATATGAAGACTTCT+AGG | - | chr3.4:93198201-93198220 | None:intergenic | 35.0% | |
| GATCTTCTTTGTGGTTTCTT+TGG | - | chr3.4:93201121-93201140 | None:intergenic | 35.0% | |
| GCTCCCATAAAAATATCAAC+TGG | - | chr3.4:93200711-93200730 | None:intergenic | 35.0% | |
| GGTTCTTTCTTTATTAAGCG+TGG | - | chr3.4:93198662-93198681 | None:intergenic | 35.0% | |
| GTAGCAGAATCTCAATTGAA+TGG | + | chr3.4:93201376-93201395 | MS.gene67065:CDS | 35.0% | |
| GTAGCATCTTCTGTTTCAAA+TGG | + | chr3.4:93198261-93198280 | MS.gene67065:CDS | 35.0% | |
| GTGGTAAAGTGCATTTAATC+TGG | + | chr3.4:93200387-93200406 | MS.gene67065:intron | 35.0% | |
| TCTTGTACCAAAATGAGTTG+TGG | - | chr3.4:93201424-93201443 | None:intergenic | 35.0% | |
| TTATGCATATCTTATGGGAG+GGG | + | chr3.4:93199097-93199116 | MS.gene67065:intron | 35.0% | |
| TTATTCAAAGGAAACCCTCA+TGG | - | chr3.4:93199338-93199357 | None:intergenic | 35.0% | |
| TTCCACTTCACTCTATCAAT+TGG | + | chr3.4:93199910-93199929 | MS.gene67065:intron | 35.0% | |
| TTTACTCTAAGCTTGAGGAA+AGG | + | chr3.4:93199397-93199416 | MS.gene67065:CDS | 35.0% | |
| TTTCCTGGAAGATTATCAAG+GGG | - | chr3.4:93198683-93198702 | None:intergenic | 35.0% | |
| ! | AGACAAACCACAACTCATTT+TGG | + | chr3.4:93201414-93201433 | MS.gene67065:CDS | 35.0% |
| ! | CCATCTGGAACCTTTAAATT+TGG | + | chr3.4:93200210-93200229 | MS.gene67065:intron | 35.0% |
| ! | CTTTTCCTGGAAGATTATCA+AGG | - | chr3.4:93198685-93198704 | None:intergenic | 35.0% |
| ! | GGAGAAATCTAGGACAAAAA+AGG | + | chr3.4:93198140-93198159 | MS.gene67065:CDS | 35.0% |
| ! | TACATTTTCTTTCAGCACTC+TGG | + | chr3.4:93198499-93198518 | MS.gene67065:intron | 35.0% |
| ! | TTTGGTGTAGTGTTTGTTCA+AGG | - | chr3.4:93197822-93197841 | None:intergenic | 35.0% |
| !! | ATATGAAGACTTCTAGGACT+TGG | - | chr3.4:93198195-93198214 | None:intergenic | 35.0% |
| !! | GCTTGTTCTGAAATATTCCA+TGG | + | chr3.4:93199955-93199974 | MS.gene67065:intron | 35.0% |
| AAACCCTCATGGTAATCCAA+GGG | - | chr3.4:93199327-93199346 | None:intergenic | 40.0% | |
| AACACTTCACTGGAAGATGA+TGG | + | chr3.4:93197796-93197815 | MS.gene67065:CDS | 40.0% | |
| AACAGGGCTAATTCCTTTAG+TGG | - | chr3.4:93201095-93201114 | None:intergenic | 40.0% | |
| AAGCTGAGATTAAGAGGCTT+AGG | + | chr3.4:93199567-93199586 | MS.gene67065:CDS | 40.0% | |
| AATTGCTTAGCTCCAGTTAG+AGG | + | chr3.4:93200475-93200494 | MS.gene67065:intron | 40.0% | |
| ACAGGGCTAATTCCTTTAGT+GGG | - | chr3.4:93201094-93201113 | None:intergenic | 40.0% | |
| AGAAATCAAAGGTCGAGATG+TGG | - | chr3.4:93199529-93199548 | None:intergenic | 40.0% | |
| ATTCTGTTGTGAAGTTGACG+TGG | - | chr3.4:93200458-93200477 | None:intergenic | 40.0% | |
| CACACCTATGTCTAGATAAG+TGG | - | chr3.4:93200368-93200387 | None:intergenic | 40.0% | |
| CACCAATTGATAGAGTGAAG+TGG | - | chr3.4:93199915-93199934 | None:intergenic | 40.0% | |
| CCACACATCAAATAGTGAAG+AGG | - | chr3.4:93198605-93198624 | None:intergenic | 40.0% | |
| CCTCAAGCTTAGAGTAAAAC+TGG | - | chr3.4:93199395-93199414 | None:intergenic | 40.0% | |
| CCTCTTCACTATTTGATGTG+TGG | + | chr3.4:93198602-93198621 | MS.gene67065:intron | 40.0% | |
| CGCTTTCATTGATATCCATC+TGG | + | chr3.4:93200195-93200214 | MS.gene67065:intron | 40.0% | |
| CTTATCTAGACATAGGTGTG+TGG | + | chr3.4:93200368-93200387 | MS.gene67065:intron | 40.0% | |
| GATGACCTACAATTAGCAGA+AGG | - | chr3.4:93198946-93198965 | None:intergenic | 40.0% | |
| GGATTCAGTTAACACTTCAC+TGG | + | chr3.4:93197786-93197805 | MS.gene67065:CDS | 40.0% | |
| GGTCGAGATGTGGTTAAAAA+AGG | - | chr3.4:93199519-93199538 | None:intergenic | 40.0% | |
| TAGCAGAAGGGTTCAAAATG+AGG | - | chr3.4:93198933-93198952 | None:intergenic | 40.0% | |
| TCGGTGAGAAAGAACAAAGA+CGG | + | chr3.4:93198219-93198238 | MS.gene67065:CDS | 40.0% | |
| TCTCAGAATAACCCCACTAA+AGG | + | chr3.4:93201079-93201098 | MS.gene67065:CDS | 40.0% | |
| TGAACCCTTCTGCTAATTGT+AGG | + | chr3.4:93198938-93198957 | MS.gene67065:intron | 40.0% | |
| TTAGACAGATTACACACAGC+GGG | - | chr3.4:93199727-93199746 | None:intergenic | 40.0% | |
| TTCACAAGTCCAAATGCTCA+AGG | - | chr3.4:93200928-93200947 | None:intergenic | 40.0% | |
| TTGGATGAACTGATCCTTTC+AGG | - | chr3.4:93201163-93201182 | None:intergenic | 40.0% | |
| TTTCTCTTCCCTTGTTGCAA+TGG | - | chr3.4:93201272-93201291 | None:intergenic | 40.0% | |
| ! | CCAGTTTTACTCTAAGCTTG+AGG | + | chr3.4:93199392-93199411 | MS.gene67065:intron | 40.0% |
| ! | GAAGATGATTCAGCTTTTCC+TGG | - | chr3.4:93198698-93198717 | None:intergenic | 40.0% |
| ! | GGAGATTTTGCTCTTGTAGT+TGG | - | chr3.4:93200959-93200978 | None:intergenic | 40.0% |
| !! | TCGTGTCGGTTCTGAAATTT+AGG | + | chr3.4:93200258-93200277 | MS.gene67065:intron | 40.0% |
| AACTGCACGGACTTCATCTA+AGG | + | chr3.4:93201189-93201208 | MS.gene67065:CDS | 45.0% | |
| AAGGATTCATGCGAAGGAAG+TGG | + | chr3.4:93199416-93199435 | MS.gene67065:CDS | 45.0% | |
| ACTCTTCTTACGACCAAGCT+TGG | - | chr3.4:93200981-93201000 | None:intergenic | 45.0% | |
| AGAGCAAAATCTCCCAAGCT+TGG | + | chr3.4:93200965-93200984 | MS.gene67065:CDS | 45.0% | |
| AGGGTTCAAAATGAGGCATG+AGG | - | chr3.4:93198926-93198945 | None:intergenic | 45.0% | |
| ATAAAGAAATCGCCCTGTCC+TGG | - | chr3.4:93198767-93198786 | None:intergenic | 45.0% | |
| ATGCCAAACCTCGTAGAGTT+GGG | + | chr3.4:93199218-93199237 | MS.gene67065:CDS | 45.0% | |
| ATTGCCCAAGTCAAGCATGT+AGG | - | chr3.4:93199832-93199851 | None:intergenic | 45.0% | |
| CAAAGACGGAAAAGGTGAAG+AGG | + | chr3.4:93198233-93198252 | MS.gene67065:CDS | 45.0% | |
| CACCTTGTCCATTGCAACAA+GGG | + | chr3.4:93201261-93201280 | MS.gene67065:CDS | 45.0% | |
| CAGGGCTAATTCCTTTAGTG+GGG | - | chr3.4:93201093-93201112 | None:intergenic | 45.0% | |
| CATCCAATTCAGCAACTGCA+CGG | + | chr3.4:93201176-93201195 | MS.gene67065:CDS | 45.0% | |
| CTCTTCTTACGACCAAGCTT+GGG | - | chr3.4:93200980-93200999 | None:intergenic | 45.0% | |
| CTTACTTGTGAGTGGAAACC+AGG | + | chr3.4:93198746-93198765 | MS.gene67065:intron | 45.0% | |
| GAAACCCTCATGGTAATCCA+AGG | - | chr3.4:93199328-93199347 | None:intergenic | 45.0% | |
| GGTTTGGCATCTTCTGATGT+AGG | - | chr3.4:93199208-93199227 | None:intergenic | 45.0% | |
| GTGGTTTCTTTGGCTGAACA+GGG | - | chr3.4:93201111-93201130 | None:intergenic | 45.0% | |
| GTTGGGACAATGCCAACTTA+TGG | + | chr3.4:93199235-93199254 | MS.gene67065:CDS | 45.0% | |
| TCCACTTGTCTCATCAGACA+AGG | - | chr3.4:93201329-93201348 | None:intergenic | 45.0% | |
| TCGAGGATGAGAGTCTAAAG+TGG | - | chr3.4:93198292-93198311 | None:intergenic | 45.0% | |
| TCGATAGAACCAAGTCAGTG+TGG | - | chr3.4:93198042-93198061 | None:intergenic | 45.0% | |
| TCTCCCTTGGATTACCATGA+GGG | + | chr3.4:93199321-93199340 | MS.gene67065:intron | 45.0% | |
| TGAGGAAAGGATTCATGCGA+AGG | + | chr3.4:93199410-93199429 | MS.gene67065:CDS | 45.0% | |
| TGTGAAGTTGACGTGGCATT+TGG | - | chr3.4:93200451-93200470 | None:intergenic | 45.0% | |
| TGTGGTTTCTTTGGCTGAAC+AGG | - | chr3.4:93201112-93201131 | None:intergenic | 45.0% | |
| TTCCCTTGTTGCAATGGACA+AGG | - | chr3.4:93201266-93201285 | None:intergenic | 45.0% | |
| TTCTCCCTTGGATTACCATG+AGG | + | chr3.4:93199320-93199339 | MS.gene67065:intron | 45.0% | |
| TTCTTCAACTCCACCCTAGA+AGG | - | chr3.4:93199647-93199666 | None:intergenic | 45.0% | |
| TTGACTGCCCTGTTCTTAAC+CGG | - | chr3.4:93198318-93198337 | None:intergenic | 45.0% | |
| TTGGTACAAGAACCCATAGC+AGG | + | chr3.4:93201433-93201452 | MS.gene67065:CDS | 45.0% | |
| TTGTATGCAATCAGGCAGAC+AGG | - | chr3.4:93199702-93199721 | None:intergenic | 45.0% | |
| ! | GAACCCCTTGATAATCTTCC+AGG | + | chr3.4:93198677-93198696 | MS.gene67065:CDS | 45.0% |
| !! | TCTGGCTCTATGTTCTGAGA+TGG | - | chr3.4:93201355-93201374 | None:intergenic | 45.0% |
| !! | TTCTAGGGTGGAGTTGAAGA+AGG | + | chr3.4:93199646-93199665 | MS.gene67065:CDS | 45.0% |
| !! | AATGTAAAAAAAAAAAATAA+AGG | - | chr3.4:93198485-93198504 | None:intergenic | 5.0% |
| AACTCCACCCTAGAAGGAGT+AGG | - | chr3.4:93199641-93199660 | None:intergenic | 50.0% | |
| ACGCACCTACATGCTTGACT+TGG | + | chr3.4:93199824-93199843 | MS.gene67065:intron | 50.0% | |
| AGAACCAAGTCAGTGTGGAG+AGG | - | chr3.4:93198037-93198056 | None:intergenic | 50.0% | |
| AGGGTGGAGTTGAAGAAGGT+TGG | + | chr3.4:93199650-93199669 | MS.gene67065:intron | 50.0% | |
| AGTCCGTGCAGTTGCTGAAT+TGG | - | chr3.4:93201182-93201201 | None:intergenic | 50.0% | |
| ATCCTTTCAGGAGTCAGTCG+AGG | - | chr3.4:93201151-93201170 | None:intergenic | 50.0% | |
| CCACCTTGTCCATTGCAACA+AGG | + | chr3.4:93201260-93201279 | MS.gene67065:CDS | 50.0% | |
| CCTTGTTGCAATGGACAAGG+TGG | - | chr3.4:93201263-93201282 | None:intergenic | 50.0% | |
| CGCACCTACATGCTTGACTT+GGG | + | chr3.4:93199825-93199844 | MS.gene67065:intron | 50.0% | |
| GATGCCAAACCTCGTAGAGT+TGG | + | chr3.4:93199217-93199236 | MS.gene67065:CDS | 50.0% | |
| GATTCATGCGAAGGAAGTGG+AGG | + | chr3.4:93199419-93199438 | MS.gene67065:CDS | 50.0% | |
| GCATGCACATCTGTGCACTT+GGG | - | chr3.4:93199804-93199823 | None:intergenic | 50.0% | |
| GCCAGGAAGCTGAGATTAAG+AGG | + | chr3.4:93199561-93199580 | MS.gene67065:CDS | 50.0% | |
| GCCTCTTAATCTCAGCTTCC+TGG | - | chr3.4:93199565-93199584 | None:intergenic | 50.0% | |
| GCCTTGTCTGATGAGACAAG+TGG | + | chr3.4:93201325-93201344 | MS.gene67065:CDS | 50.0% | |
| GCGAGCTGAGAGAAGAAAAG+AGG | + | chr3.4:93199279-93199298 | MS.gene67065:CDS | 50.0% | |
| GGAGGGAGAGATCTTCTTTG+TGG | - | chr3.4:93201130-93201149 | None:intergenic | 50.0% | |
| GTTGACGTGGCATTTGGATG+AGG | - | chr3.4:93200445-93200464 | None:intergenic | 50.0% | |
| TCCAATGCCAAGCTTCTACC+AGG | + | chr3.4:93199613-93199632 | MS.gene67065:CDS | 50.0% | |
| TCCTGGTAGAAGCTTGGCAT+TGG | - | chr3.4:93199617-93199636 | None:intergenic | 50.0% | |
| TCGACAGCCGGTTAAGAACA+GGG | + | chr3.4:93198308-93198327 | MS.gene67065:CDS | 50.0% | |
| TGAAGCAGCTGCAGCTATTG+AGG | + | chr3.4:93201294-93201313 | MS.gene67065:CDS | 50.0% | |
| TGCACGGACTTCATCTAAGG+CGG | + | chr3.4:93201192-93201211 | MS.gene67065:CDS | 50.0% | |
| TGCATGCACATCTGTGCACT+TGG | - | chr3.4:93199805-93199824 | None:intergenic | 50.0% | |
| TGTCCCAACTCTACGAGGTT+TGG | - | chr3.4:93199224-93199243 | None:intergenic | 50.0% | |
| TGTGAGTGGAAACCAGGACA+GGG | + | chr3.4:93198752-93198771 | MS.gene67065:intron | 50.0% | |
| TTGTGAGTGGAAACCAGGAC+AGG | + | chr3.4:93198751-93198770 | MS.gene67065:intron | 50.0% | |
| TTTCAGGAGTCAGTCGAGGA+GGG | - | chr3.4:93201147-93201166 | None:intergenic | 50.0% | |
| ! | AGCGGGCTTTGTATGCAATC+AGG | - | chr3.4:93199710-93199729 | None:intergenic | 50.0% |
| ! | GAATCCTCTCCACACTGACT+TGG | + | chr3.4:93198030-93198049 | MS.gene67065:intron | 50.0% |
| ! | GTGACTTGTACACGTCGTGT+CGG | + | chr3.4:93200244-93200263 | MS.gene67065:intron | 50.0% |
| ACCAGGAGCCTACTCCTTCT+AGG | + | chr3.4:93199630-93199649 | MS.gene67065:CDS | 55.0% | |
| AGACTCTCATCCTCGACAGC+CGG | + | chr3.4:93198296-93198315 | MS.gene67065:CDS | 55.0% | |
| CCAGGAGCCTACTCCTTCTA+GGG | + | chr3.4:93199631-93199650 | MS.gene67065:CDS | 55.0% | |
| CGGAAAAGGTGAAGAGGCTG+CGG | + | chr3.4:93198239-93198258 | MS.gene67065:CDS | 55.0% | |
| CTCGACAGCCGGTTAAGAAC+AGG | + | chr3.4:93198307-93198326 | MS.gene67065:CDS | 55.0% | |
| CTGTTCTTAACCGGCTGTCG+AGG | - | chr3.4:93198309-93198328 | None:intergenic | 55.0% | |
| CTTTCAGGAGTCAGTCGAGG+AGG | - | chr3.4:93201148-93201167 | None:intergenic | 55.0% | |
| GGCATTGTCCCAACTCTACG+AGG | - | chr3.4:93199229-93199248 | None:intergenic | 55.0% | |
| GTAGGCTCCTGGTAGAAGCT+TGG | - | chr3.4:93199623-93199642 | None:intergenic | 55.0% | |
| ! | CTCCTCGACTGACTCCTGAA+AGG | + | chr3.4:93201146-93201165 | MS.gene67065:CDS | 55.0% |
| !! | CAAGCTGACTCGACTGTCCA+AGG | + | chr3.4:93198341-93198360 | MS.gene67065:CDS | 55.0% |
| CCCTAGAAGGAGTAGGCTCC+TGG | - | chr3.4:93199634-93199653 | None:intergenic | 60.0% | |
| ! | GGAGCCTACTCCTTCTAGGG+TGG | + | chr3.4:93199634-93199653 | MS.gene67065:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 93197784 | 93201459 | 93197784 | ID=MS.gene67065 |
| chr3.4 | mRNA | 93197784 | 93201459 | 93197784 | ID=MS.gene67065.t1;Parent=MS.gene67065 |
| chr3.4 | exon | 93197784 | 93198023 | 93197784 | ID=MS.gene67065.t1.exon1;Parent=MS.gene67065.t1 |
| chr3.4 | CDS | 93197784 | 93198023 | 93197784 | ID=cds.MS.gene67065.t1;Parent=MS.gene67065.t1 |
| chr3.4 | exon | 93198111 | 93198362 | 93198111 | ID=MS.gene67065.t1.exon2;Parent=MS.gene67065.t1 |
| chr3.4 | CDS | 93198111 | 93198362 | 93198111 | ID=cds.MS.gene67065.t1;Parent=MS.gene67065.t1 |
| chr3.4 | exon | 93198514 | 93198554 | 93198514 | ID=MS.gene67065.t1.exon3;Parent=MS.gene67065.t1 |
| chr3.4 | CDS | 93198514 | 93198554 | 93198514 | ID=cds.MS.gene67065.t1;Parent=MS.gene67065.t1 |
| chr3.4 | exon | 93198646 | 93198717 | 93198646 | ID=MS.gene67065.t1.exon4;Parent=MS.gene67065.t1 |
| chr3.4 | CDS | 93198646 | 93198717 | 93198646 | ID=cds.MS.gene67065.t1;Parent=MS.gene67065.t1 |
| chr3.4 | exon | 93199204 | 93199300 | 93199204 | ID=MS.gene67065.t1.exon5;Parent=MS.gene67065.t1 |
| chr3.4 | CDS | 93199204 | 93199300 | 93199204 | ID=cds.MS.gene67065.t1;Parent=MS.gene67065.t1 |
| chr3.4 | exon | 93199396 | 93199467 | 93199396 | ID=MS.gene67065.t1.exon6;Parent=MS.gene67065.t1 |
| chr3.4 | CDS | 93199396 | 93199467 | 93199396 | ID=cds.MS.gene67065.t1;Parent=MS.gene67065.t1 |
| chr3.4 | exon | 93199557 | 93199667 | 93199557 | ID=MS.gene67065.t1.exon7;Parent=MS.gene67065.t1 |
| chr3.4 | CDS | 93199557 | 93199667 | 93199557 | ID=cds.MS.gene67065.t1;Parent=MS.gene67065.t1 |
| chr3.4 | exon | 93200953 | 93201459 | 93200953 | ID=MS.gene67065.t1.exon8;Parent=MS.gene67065.t1 |
| chr3.4 | CDS | 93200953 | 93201459 | 93200953 | ID=cds.MS.gene67065.t1;Parent=MS.gene67065.t1 |
| Gene Sequence |
| Protein sequence |
