Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072889.t1 | AFK45470.1 | 83.7 | 465 | 61 | 3 | 1 | 463 | 1 | 452 | 1.60E-166 | 595.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072889.t1 | Q94C48 | 49.1 | 265 | 124 | 7 | 101 | 360 | 88 | 346 | 7.3e-51 | 203.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072889.t1 | I3SYX8 | 83.7 | 465 | 61 | 3 | 1 | 463 | 1 | 452 | 1.2e-166 | 595.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene67065 | MS.gene072889 | PPI |
| MS.gene014835 | MS.gene072889 | PPI |
| MS.gene072889 | MS.gene60284 | PPI |
| MS.gene32634 | MS.gene072889 | PPI |
| MS.gene015987 | MS.gene072889 | PPI |
| MS.gene33200 | MS.gene072889 | PPI |
| MS.gene61699 | MS.gene072889 | PPI |
| MS.gene60284 | MS.gene072889 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072889.t1 | MTR_3g107050 | 88.841 | 466 | 36 | 3 | 1 | 463 | 1 | 453 | 0.0 | 809 |
| MS.gene072889.t1 | MTR_1g012530 | 50.737 | 475 | 199 | 11 | 1 | 461 | 2 | 455 | 1.66e-132 | 390 |
| MS.gene072889.t1 | MTR_1g012530 | 51.466 | 307 | 133 | 7 | 1 | 296 | 2 | 303 | 9.10e-88 | 272 |
| MS.gene072889.t1 | MTR_1g055085 | 44.554 | 202 | 84 | 5 | 220 | 417 | 233 | 410 | 6.74e-38 | 144 |
| MS.gene072889.t1 | MTR_7g106750 | 41.364 | 220 | 98 | 6 | 104 | 312 | 130 | 329 | 1.66e-36 | 139 |
| MS.gene072889.t1 | MTR_1g075310 | 60.870 | 92 | 36 | 0 | 222 | 313 | 217 | 308 | 1.40e-28 | 116 |
| MS.gene072889.t1 | MTR_1g080690 | 52.688 | 93 | 40 | 1 | 214 | 306 | 191 | 279 | 3.87e-21 | 95.1 |
| MS.gene072889.t1 | MTR_7g115310 | 56.566 | 99 | 39 | 1 | 213 | 311 | 207 | 301 | 4.18e-20 | 94.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072889.t1 | AT4G32330 | 47.518 | 282 | 138 | 6 | 83 | 360 | 70 | 345 | 4.95e-70 | 229 |
| MS.gene072889.t1 | AT4G32330 | 47.703 | 283 | 137 | 7 | 83 | 360 | 70 | 346 | 8.64e-69 | 226 |
| MS.gene072889.t1 | AT4G32330 | 47.703 | 283 | 137 | 7 | 83 | 360 | 70 | 346 | 8.64e-69 | 226 |
| MS.gene072889.t1 | AT4G32330 | 47.703 | 283 | 137 | 7 | 83 | 360 | 70 | 346 | 8.64e-69 | 226 |
| MS.gene072889.t1 | AT2G25480 | 45.679 | 243 | 128 | 3 | 135 | 376 | 99 | 338 | 1.77e-58 | 198 |
| MS.gene072889.t1 | AT2G25480 | 45.679 | 243 | 129 | 3 | 135 | 376 | 99 | 339 | 2.11e-58 | 197 |
| MS.gene072889.t1 | AT2G35880 | 72.816 | 103 | 27 | 1 | 211 | 313 | 236 | 337 | 7.52e-42 | 154 |
| MS.gene072889.t1 | AT2G35880 | 72.816 | 103 | 27 | 1 | 211 | 313 | 236 | 337 | 7.52e-42 | 154 |
| MS.gene072889.t1 | AT2G35880 | 72.816 | 103 | 27 | 1 | 211 | 313 | 236 | 337 | 7.52e-42 | 154 |
| MS.gene072889.t1 | AT3G23090 | 54.902 | 102 | 46 | 0 | 208 | 309 | 181 | 282 | 2.54e-25 | 106 |
| MS.gene072889.t1 | AT3G23090 | 54.902 | 102 | 46 | 0 | 208 | 309 | 182 | 283 | 2.70e-25 | 106 |
| MS.gene072889.t1 | AT3G23090 | 54.902 | 102 | 46 | 0 | 208 | 309 | 217 | 318 | 5.35e-25 | 106 |
| MS.gene072889.t1 | AT3G23090 | 52.830 | 106 | 46 | 1 | 208 | 309 | 181 | 286 | 1.92e-24 | 104 |
| MS.gene072889.t1 | AT3G23090 | 52.830 | 106 | 46 | 1 | 208 | 309 | 217 | 322 | 3.78e-24 | 103 |
| MS.gene072889.t1 | AT3G04630 | 52.747 | 91 | 41 | 1 | 218 | 306 | 126 | 216 | 1.45e-22 | 97.8 |
| MS.gene072889.t1 | AT5G28646 | 47.899 | 119 | 54 | 3 | 214 | 328 | 80 | 194 | 1.52e-22 | 95.5 |
| MS.gene072889.t1 | AT3G04630 | 52.747 | 91 | 41 | 1 | 218 | 306 | 122 | 212 | 1.53e-22 | 97.8 |
| MS.gene072889.t1 | AT3G04630 | 52.747 | 91 | 41 | 1 | 218 | 306 | 121 | 211 | 1.58e-22 | 97.8 |
| MS.gene072889.t1 | AT5G28646 | 47.899 | 119 | 54 | 3 | 214 | 328 | 84 | 198 | 1.81e-22 | 95.5 |
| MS.gene072889.t1 | AT5G28646 | 47.899 | 119 | 54 | 3 | 214 | 328 | 84 | 198 | 1.81e-22 | 95.5 |
| MS.gene072889.t1 | AT1G70950 | 69.841 | 63 | 19 | 0 | 221 | 283 | 328 | 390 | 1.92e-22 | 100 |
| MS.gene072889.t1 | AT1G54460 | 47.863 | 117 | 56 | 2 | 198 | 313 | 145 | 257 | 7.46e-22 | 96.7 |
Find 97 sgRNAs with CRISPR-Local
Find 229 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATCTTCTTTGTGGTTTCTT+TGG | 0.168066 | 3.2:+87261424 | None:intergenic |
| TTGGATGAACTGATCCTTTC+AGG | 0.194545 | 3.2:+87261382 | None:intergenic |
| AGACAAACCACAACTCATTT+TGG | 0.224152 | 3.2:-87261128 | MS.gene072889:CDS |
| TGTGGTTTCTTTGGCTGAAC+AGG | 0.226403 | 3.2:+87261433 | None:intergenic |
| GCCTCTTAATCTCAGCTTCC+TGG | 0.282090 | 3.2:+87262980 | None:intergenic |
| GAACCCCTTGATAATCTTCC+AGG | 0.318461 | 3.2:-87263865 | MS.gene072889:CDS |
| ATGGAAGAACAAGGATTAAA+TGG | 0.328736 | 3.2:-87264575 | MS.gene072889:CDS |
| GAAGTCATATGAAGACTTCT+AGG | 0.332240 | 3.2:+87264344 | None:intergenic |
| ACCAGGAGCCTACTCCTTCT+AGG | 0.337669 | 3.2:-87262912 | MS.gene072889:CDS |
| GAACAAACACTACACCAAAA+TGG | 0.342296 | 3.2:-87264719 | MS.gene072889:CDS |
| GTTGGGACAATGCCAACTTA+TGG | 0.342732 | 3.2:-87263307 | MS.gene072889:CDS |
| TATCAATGATAATTTGTCTA+TGG | 0.352840 | 3.2:-87264594 | MS.gene072889:CDS |
| AGTTGAAATCGTTGATGAAA+TGG | 0.373626 | 3.2:-87264423 | MS.gene072889:CDS |
| AAACAAACTGCACTGTCTAA+TGG | 0.379381 | 3.2:-87264620 | MS.gene072889:CDS |
| TGCTTAATGCTATCCTGCTA+TGG | 0.379385 | 3.2:+87261096 | None:intergenic |
| CTCGACAGCCGGTTAAGAAC+AGG | 0.385189 | 3.2:-87264235 | MS.gene072889:CDS |
| TTGACTGCCCTGTTCTTAAC+CGG | 0.385934 | 3.2:+87264227 | None:intergenic |
| CTTTCTCATCAAGACTTAAA+CGG | 0.397130 | 3.2:+87261488 | None:intergenic |
| TTCTTCAACTCCACCCTAGA+AGG | 0.399718 | 3.2:+87262898 | None:intergenic |
| AGTCCGTGCAGTTGCTGAAT+TGG | 0.411034 | 3.2:+87261363 | None:intergenic |
| TTCAGTTGTTACACTGGATA+AGG | 0.411683 | 3.2:+87261309 | None:intergenic |
| AATTGAGATTCTGCTACATC+TGG | 0.413515 | 3.2:+87261172 | None:intergenic |
| GTTGTTGATGAACACCATTT+TGG | 0.414950 | 3.2:+87264705 | None:intergenic |
| TGAAGCAGCTGCAGCTATTG+AGG | 0.421562 | 3.2:-87261248 | MS.gene072889:CDS |
| GCTTAATGCTATCCTGCTAT+GGG | 0.424527 | 3.2:+87261097 | None:intergenic |
| AAGCTGAGATTAAGAGGCTT+AGG | 0.426472 | 3.2:-87262975 | MS.gene072889:CDS |
| AACTGCACGGACTTCATCTA+AGG | 0.429060 | 3.2:-87261353 | MS.gene072889:CDS |
| GGAGGGAGAGATCTTCTTTG+TGG | 0.439601 | 3.2:+87261415 | None:intergenic |
| ACAACTGTTTAATTCAGAAC+AGG | 0.442289 | 3.2:-87264684 | MS.gene072889:CDS |
| TGTCCCAACTCTACGAGGTT+TGG | 0.442849 | 3.2:+87263321 | None:intergenic |
| TTTCTCTTCCCTTGTTGCAA+TGG | 0.452310 | 3.2:+87261273 | None:intergenic |
| TTGATGAAATGGAGAAATCT+AGG | 0.454744 | 3.2:-87264412 | MS.gene072889:CDS |
| AGGATTAAATGGCAAAATAG+AGG | 0.462425 | 3.2:-87264564 | MS.gene072889:CDS |
| GTAGCATCTTCTGTTTCAAA+TGG | 0.464133 | 3.2:-87264281 | MS.gene072889:CDS |
| GCCAGGAAGCTGAGATTAAG+AGG | 0.465254 | 3.2:-87262981 | MS.gene072889:CDS |
| AACAGGGCTAATTCCTTTAG+TGG | 0.473778 | 3.2:+87261450 | None:intergenic |
| TTCTAGGGTGGAGTTGAAGA+AGG | 0.474020 | 3.2:-87262896 | MS.gene072889:intron |
| ACTCTTCTTACGACCAAGCT+TGG | 0.479893 | 3.2:+87261564 | None:intergenic |
| GGATTCAGTTAACACTTCAC+TGG | 0.481211 | 3.2:-87264756 | MS.gene072889:CDS |
| CTCTTCTTACGACCAAGCTT+GGG | 0.483203 | 3.2:+87261565 | None:intergenic |
| ATGCCAAACCTCGTAGAGTT+GGG | 0.490023 | 3.2:-87263324 | MS.gene072889:CDS |
| ACAGGGCTAATTCCTTTAGT+GGG | 0.491541 | 3.2:+87261451 | None:intergenic |
| TTCCCTTGTTGCAATGGACA+AGG | 0.498349 | 3.2:+87261279 | None:intergenic |
| CCAGGAGCCTACTCCTTCTA+GGG | 0.502058 | 3.2:-87262911 | MS.gene072889:CDS |
| GGTTTGGCATCTTCTGATGT+AGG | 0.503553 | 3.2:+87263337 | None:intergenic |
| TTGAAACTGAATCCATAAGT+TGG | 0.507092 | 3.2:+87263295 | None:intergenic |
| GTGGTTTCTTTGGCTGAACA+GGG | 0.512858 | 3.2:+87261434 | None:intergenic |
| GATGCCAAACCTCGTAGAGT+TGG | 0.513113 | 3.2:-87263325 | MS.gene072889:CDS |
| TCCTGGTAGAAGCTTGGCAT+TGG | 0.514744 | 3.2:+87262928 | None:intergenic |
| ATATGAAGACTTCTAGGACT+TGG | 0.516716 | 3.2:+87264350 | None:intergenic |
| TCTCAGAATAACCCCACTAA+AGG | 0.516819 | 3.2:-87261463 | MS.gene072889:CDS |
| TCCAATGCCAAGCTTCTACC+AGG | 0.517321 | 3.2:-87262929 | MS.gene072889:CDS |
| CCCTAGAAGGAGTAGGCTCC+TGG | 0.521015 | 3.2:+87262911 | None:intergenic |
| AAGGATTCATGCGAAGGAAG+TGG | 0.521232 | 3.2:-87263126 | MS.gene072889:CDS |
| AGACTCTCATCCTCGACAGC+CGG | 0.534706 | 3.2:-87264246 | MS.gene072889:CDS |
| TTGGTACAAGAACCCATAGC+AGG | 0.540838 | 3.2:-87261109 | MS.gene072889:CDS |
| AGAAAGAACAAAGACGGAAA+AGG | 0.541738 | 3.2:-87264317 | MS.gene072889:CDS |
| CACCTTGTCCATTGCAACAA+GGG | 0.541747 | 3.2:-87261281 | MS.gene072889:CDS |
| TCTGGCTCTATGTTCTGAGA+TGG | 0.545911 | 3.2:+87261190 | None:intergenic |
| GTAGCAGAATCTCAATTGAA+TGG | 0.549239 | 3.2:-87261166 | MS.gene072889:CDS |
| CTGTTCTTAACCGGCTGTCG+AGG | 0.550219 | 3.2:+87264236 | None:intergenic |
| GCGAGCTGAGAGAAGAAAAG+AGG | 0.553578 | 3.2:-87263263 | MS.gene072889:intron |
| AGAGCAAAATCTCCCAAGCT+TGG | 0.555915 | 3.2:-87261577 | MS.gene072889:CDS |
| GTAGGCTCCTGGTAGAAGCT+TGG | 0.558222 | 3.2:+87262922 | None:intergenic |
| TCTTGTACCAAAATGAGTTG+TGG | 0.564689 | 3.2:+87261121 | None:intergenic |
| AACACTTCACTGGAAGATGA+TGG | 0.565636 | 3.2:-87264746 | MS.gene072889:CDS |
| CCACCTTGTCCATTGCAACA+AGG | 0.567508 | 3.2:-87261282 | MS.gene072889:CDS |
| GGTAACTTCAGTTGTTACAC+TGG | 0.575283 | 3.2:+87261303 | None:intergenic |
| GGTTCTTTCTTTATTAAGCG+TGG | 0.580191 | 3.2:+87263883 | None:intergenic |
| CAAGCAGACTCGACTGTCCA+AGG | 0.582646 | 3.2:-87264201 | MS.gene072889:intron |
| GGATTAAATGGCAAAATAGA+GGG | 0.583012 | 3.2:-87264563 | MS.gene072889:CDS |
| TTTACTCTAAGCTTGAGGAA+AGG | 0.592432 | 3.2:-87263145 | MS.gene072889:CDS |
| CGGAAAAGGTGAAGAGGCTG+CGG | 0.593404 | 3.2:-87264303 | MS.gene072889:CDS |
| CTCCTCGACTGACTCCTGAA+AGG | 0.594114 | 3.2:-87261396 | MS.gene072889:CDS |
| AGTTGTTACACTGGATAAGG+AGG | 0.597207 | 3.2:+87261312 | None:intergenic |
| TAGAAGTCTTCATATGACTT+CGG | 0.599550 | 3.2:-87264342 | MS.gene072889:CDS |
| TGAGGAAAGGATTCATGCGA+AGG | 0.601101 | 3.2:-87263132 | MS.gene072889:CDS |
| CTTTCAGGAGTCAGTCGAGG+AGG | 0.604733 | 3.2:+87261397 | None:intergenic |
| TTTCAGGAGTCAGTCGAGGA+GGG | 0.609189 | 3.2:+87261398 | None:intergenic |
| CAAAGACGGAAAAGGTGAAG+AGG | 0.614474 | 3.2:-87264309 | MS.gene072889:CDS |
| TCGAGGATGAGAGTCTAAAG+TGG | 0.615745 | 3.2:+87264253 | None:intergenic |
| CAGGGCTAATTCCTTTAGTG+GGG | 0.617483 | 3.2:+87261452 | None:intergenic |
| TCGACAGCCGGTTAAGAACA+GGG | 0.621749 | 3.2:-87264234 | MS.gene072889:CDS |
| GATTCATGCGAAGGAAGTGG+AGG | 0.623695 | 3.2:-87263123 | MS.gene072889:CDS |
| AACTCCACCCTAGAAGGAGT+AGG | 0.629124 | 3.2:+87262904 | None:intergenic |
| TCGGTGAGAAAGAACAAAGA+CGG | 0.640205 | 3.2:-87264323 | MS.gene072889:CDS |
| CATCCAATTCAGCAACTGCA+CGG | 0.641669 | 3.2:-87261366 | MS.gene072889:CDS |
| GCCTTGTCTGATGAGACAAG+TGG | 0.643159 | 3.2:-87261217 | MS.gene072889:CDS |
| ATCCTTTCAGGAGTCAGTCG+AGG | 0.644922 | 3.2:+87261394 | None:intergenic |
| TCCACTTGTCTCATCAGACA+AGG | 0.648448 | 3.2:+87261216 | None:intergenic |
| GGAGCCTACTCCTTCTAGGG+TGG | 0.650646 | 3.2:-87262908 | MS.gene072889:CDS |
| GGCATTGTCCCAACTCTACG+AGG | 0.655109 | 3.2:+87263316 | None:intergenic |
| CTGTTTAATTCAGAACAGGA+TGG | 0.660275 | 3.2:-87264680 | MS.gene072889:CDS |
| CCTTGTTGCAATGGACAAGG+TGG | 0.666267 | 3.2:+87261282 | None:intergenic |
| TGCACGGACTTCATCTAAGG+CGG | 0.675302 | 3.2:-87261350 | MS.gene072889:CDS |
| TTTCCTGGAAGATTATCAAG+GGG | 0.677776 | 3.2:+87263862 | None:intergenic |
| AATTTGTCTATGGAAGAACA+AGG | 0.717987 | 3.2:-87264584 | MS.gene072889:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAATAAAAACAATAAAAAA+AGG | + | chr3.2:87262046-87262065 | None:intergenic | 10.0% |
| !!! | ATGTATTTTGAAATTATTAT+AGG | - | chr3.2:87261410-87261429 | MS.gene072889:CDS | 10.0% |
| !! | AGATCAATAATATAATATGA+AGG | + | chr3.2:87264054-87264073 | None:intergenic | 15.0% |
| !! | TAATAATTTCAAAATACATG+AGG | + | chr3.2:87261409-87261428 | None:intergenic | 15.0% |
| !!! | AATTTTTAAAATTAGAGAGA+AGG | - | chr3.2:87262385-87262404 | MS.gene072889:intron | 15.0% |
| !!! | ATTTTTAAAATTAGAGAGAA+GGG | - | chr3.2:87262386-87262405 | MS.gene072889:intron | 15.0% |
| !!! | TGTAAATTAGTTTACAATTA+TGG | - | chr3.2:87262471-87262490 | MS.gene072889:intron | 15.0% |
| !! | AAAACACAAACCAAATTTAA+AGG | + | chr3.2:87263544-87263563 | None:intergenic | 20.0% |
| !! | AACTATGATTTCAATTTGAA+TGG | - | chr3.2:87263426-87263445 | MS.gene072889:intron | 20.0% |
| !! | AATCATAATATATGATAGCT+AGG | - | chr3.2:87262794-87262813 | MS.gene072889:intron | 20.0% |
| !! | AATTTGAACAAACATTGTTA+GGG | + | chr3.2:87262318-87262337 | None:intergenic | 20.0% |
| !! | AGTTTACAATTATGGTTTAA+TGG | - | chr3.2:87262479-87262498 | MS.gene072889:intron | 20.0% |
| !! | ATATATTATGATTATCACCT+TGG | + | chr3.2:87262787-87262806 | None:intergenic | 20.0% |
| !! | ATATCACAATAGTAAGTTTA+TGG | - | chr3.2:87262106-87262125 | MS.gene072889:intron | 20.0% |
| !! | TAATTTGAACAAACATTGTT+AGG | + | chr3.2:87262319-87262338 | None:intergenic | 20.0% |
| !! | TATCACAATAGTAAGTTTAT+GGG | - | chr3.2:87262107-87262126 | MS.gene072889:intron | 20.0% |
| !! | TGTAATGAAAATTATAGTGT+TGG | - | chr3.2:87261776-87261795 | MS.gene072889:intron | 20.0% |
| !! | TTCCTATAAAAAGAAATCAA+AGG | + | chr3.2:87262861-87262880 | None:intergenic | 20.0% |
| !!! | AAACAATGTTAATGTTTTCA+AGG | - | chr3.2:87261323-87261342 | MS.gene072889:CDS | 20.0% |
| !!! | AGTTTCTTCTTTAATCTTTT+TGG | - | chr3.2:87261750-87261769 | MS.gene072889:intron | 20.0% |
| !!! | GTAATCTGTCTAATTATTTT+CGG | - | chr3.2:87263055-87263074 | MS.gene072889:intron | 20.0% |
| !!! | GTCTAAAAAAGTTCATATTT+TGG | - | chr3.2:87262687-87262706 | MS.gene072889:intron | 20.0% |
| !!! | TAAAAAAGTTCATATTTTGG+TGG | - | chr3.2:87262690-87262709 | MS.gene072889:intron | 20.0% |
| !!! | TATCAATGATAATTTGTCTA+TGG | - | chr3.2:87261269-87261288 | MS.gene072889:CDS | 20.0% |
| !!! | TATCTGATTCTAAAAATGAA+TGG | - | chr3.2:87263636-87263655 | MS.gene072889:intron | 20.0% |
| !!! | TTAGATTTCAAAATTTGTTC+AGG | + | chr3.2:87263993-87264012 | None:intergenic | 20.0% |
| !!! | TTTGAAATTATTATAGGATG+AGG | - | chr3.2:87261416-87261435 | MS.gene072889:CDS | 20.0% |
| !!! | TTTTCGGTTTTTTTAACTAT+AGG | - | chr3.2:87263071-87263090 | MS.gene072889:intron | 20.0% |
| ! | AAAGATTAAAGAAGAAACTG+AGG | + | chr3.2:87261749-87261768 | None:intergenic | 25.0% |
| ! | AAATATCATTCAAGCATCTA+AGG | + | chr3.2:87262146-87262165 | None:intergenic | 25.0% |
| ! | AATATCATTCAAGCATCTAA+GGG | + | chr3.2:87262145-87262164 | None:intergenic | 25.0% |
| ! | ATGCAAATTGTTTCATACAT+TGG | + | chr3.2:87261874-87261893 | None:intergenic | 25.0% |
| ! | ATTGCAACTTATTGAATACA+GGG | - | chr3.2:87261946-87261965 | MS.gene072889:intron | 25.0% |
| ! | GAATGAGTTTATATAATGAG+TGG | + | chr3.2:87263319-87263338 | None:intergenic | 25.0% |
| ! | GTGATTTATGCATATCTTAT+GGG | - | chr3.2:87262413-87262432 | MS.gene072889:intron | 25.0% |
| ! | TGTGATTTATGCATATCTTA+TGG | - | chr3.2:87262412-87262431 | MS.gene072889:intron | 25.0% |
| ! | TTAACTCAATAAGCTTCTTA+GGG | - | chr3.2:87262209-87262228 | MS.gene072889:intron | 25.0% |
| ! | TTTAACTCAATAAGCTTCTT+AGG | - | chr3.2:87262208-87262227 | MS.gene072889:intron | 25.0% |
| ! | TTTCTGTTTACGTACATATA+GGG | - | chr3.2:87262994-87263013 | MS.gene072889:intron | 25.0% |
| !! | GATATTTAAAGTTAGCTAGT+TGG | - | chr3.2:87263820-87263839 | MS.gene072889:intron | 25.0% |
| !! | TAAACAACAAAGTTTTACCT+TGG | + | chr3.2:87261682-87261701 | None:intergenic | 25.0% |
| !!! | ACACCAGTTGATATTTTTAT+GGG | - | chr3.2:87264026-87264045 | MS.gene072889:CDS | 25.0% |
| !!! | GACCTTTGATTTCTTTTTAT+AGG | - | chr3.2:87262856-87262875 | MS.gene072889:intron | 25.0% |
| !!! | TAAAACTTTGTTGTTTACAC+AGG | - | chr3.2:87261685-87261704 | MS.gene072889:intron | 25.0% |
| !!! | TACACCAGTTGATATTTTTA+TGG | - | chr3.2:87264025-87264044 | MS.gene072889:CDS | 25.0% |
| !!! | TAGGACTTATAAATGGATTA+AGG | + | chr3.2:87262510-87262529 | None:intergenic | 25.0% |
| AACTTTGTTGAAAGAAAACC+AGG | + | chr3.2:87264107-87264126 | None:intergenic | 30.0% | |
| AATTGAAATCCTTGAGCATT+TGG | - | chr3.2:87264237-87264256 | MS.gene072889:CDS | 30.0% | |
| AATTTGTCTATGGAAGAACA+AGG | - | chr3.2:87261279-87261298 | MS.gene072889:CDS | 30.0% | |
| ACAACTGTTTAATTCAGAAC+AGG | - | chr3.2:87261179-87261198 | MS.gene072889:CDS | 30.0% | |
| AGGATTAAATGGCAAAATAG+AGG | - | chr3.2:87261299-87261318 | MS.gene072889:CDS | 30.0% | |
| AGGTCATCTATAAAATGACA+AGG | - | chr3.2:87262279-87262298 | MS.gene072889:intron | 30.0% | |
| ATGGAAGAACAAGGATTAAA+TGG | - | chr3.2:87261288-87261307 | MS.gene072889:CDS | 30.0% | |
| ATTCCATGGTTAAGAATGAT+AGG | - | chr3.2:87263290-87263309 | MS.gene072889:CDS | 30.0% | |
| ATTGCTGCATAAATACAACT+GGG | + | chr3.2:87263908-87263927 | None:intergenic | 30.0% | |
| ATTGTAATTGCTCAAGAACT+TGG | - | chr3.2:87263966-87263985 | MS.gene072889:intron | 30.0% | |
| ATTTATGCATATCTTATGGG+AGG | - | chr3.2:87262416-87262435 | MS.gene072889:intron | 30.0% | |
| CTTTAAATATCTCCTCTAAC+TGG | + | chr3.2:87263811-87263830 | None:intergenic | 30.0% | |
| CTTTCTCATCAAGACTTAAA+CGG | + | chr3.2:87264378-87264397 | None:intergenic | 30.0% | |
| GATTGCAACTTATTGAATAC+AGG | - | chr3.2:87261945-87261964 | MS.gene072889:intron | 30.0% | |
| GGATTAAATGGCAAAATAGA+GGG | - | chr3.2:87261300-87261319 | MS.gene072889:CDS | 30.0% | |
| GTTTCTGTTTACGTACATAT+AGG | - | chr3.2:87262993-87263012 | MS.gene072889:intron | 30.0% | |
| TAGAAGTCTTCATATGACTT+CGG | - | chr3.2:87261521-87261540 | MS.gene072889:CDS | 30.0% | |
| TCTGATGTAGGACTTATAAA+TGG | + | chr3.2:87262517-87262536 | None:intergenic | 30.0% | |
| TGCTAACTCAAAAAAGTTCA+TGG | + | chr3.2:87264198-87264217 | None:intergenic | 30.0% | |
| TTATTCTTCTTACTTGTGAG+TGG | - | chr3.2:87262059-87262078 | MS.gene072889:intron | 30.0% | |
| TTGAAACTGAATCCATAAGT+TGG | + | chr3.2:87262571-87262590 | None:intergenic | 30.0% | |
| TTGATGAAATGGAGAAATCT+AGG | - | chr3.2:87261451-87261470 | MS.gene072889:CDS | 30.0% | |
| TTGTAATTGCTCAAGAACTT+GGG | - | chr3.2:87263967-87263986 | MS.gene072889:intron | 30.0% | |
| TTTATGCATATCTTATGGGA+GGG | - | chr3.2:87262417-87262436 | MS.gene072889:intron | 30.0% | |
| TTTCCTTTGAATAAGCTTGT+AGG | - | chr3.2:87262665-87262684 | MS.gene072889:intron | 30.0% | |
| ! | AGTTGAAATCGTTGATGAAA+TGG | - | chr3.2:87261440-87261459 | MS.gene072889:CDS | 30.0% |
| ! | ATAGGCAATGTATTTTCTGT+TGG | - | chr3.2:87263089-87263108 | MS.gene072889:intron | 30.0% |
| ! | TGCTGTTTAAACTTGTCATT+AGG | - | chr3.2:87264142-87264161 | MS.gene072889:intron | 30.0% |
| ! | TGCTTGAATGATATTTTCTG+TGG | - | chr3.2:87262150-87262169 | MS.gene072889:intron | 30.0% |
| ! | TTTCTTTTTATAGGAAAGCC+AGG | - | chr3.2:87262865-87262884 | MS.gene072889:intron | 30.0% |
| ! | TTTTCCACTTATCTAGACAT+AGG | - | chr3.2:87263682-87263701 | MS.gene072889:intron | 30.0% |
| ! | TTTTCCTGGAAGATTATCAA+GGG | + | chr3.2:87262005-87262024 | None:intergenic | 30.0% |
| !! | TAGAAAGTGATTCTAAAACC+TGG | - | chr3.2:87264086-87264105 | MS.gene072889:intron | 30.0% |
| !!! | CATTTAATCTGGTTTTACTC+TGG | - | chr3.2:87263719-87263738 | MS.gene072889:intron | 30.0% |
| !!! | CATTTTGATTAGATCTGCAT+AGG | + | chr3.2:87263931-87263950 | None:intergenic | 30.0% |
| AAACAAACTGCACTGTCTAA+TGG | - | chr3.2:87261243-87261262 | MS.gene072889:CDS | 35.0% | |
| AATTGAGATTCTGCTACATC+TGG | + | chr3.2:87264694-87264713 | None:intergenic | 35.0% | |
| AGAAAGAACAAAGACGGAAA+AGG | - | chr3.2:87261546-87261565 | MS.gene072889:CDS | 35.0% | |
| AGACCTACAAGCTTATTCAA+AGG | + | chr3.2:87262671-87262690 | None:intergenic | 35.0% | |
| AGACCTATCATTCTTAACCA+TGG | + | chr3.2:87263296-87263315 | None:intergenic | 35.0% | |
| AGATGGATATCAATGAAAGC+GGG | + | chr3.2:87263517-87263536 | None:intergenic | 35.0% | |
| ATGACCTACAATTAGCAGAA+GGG | + | chr3.2:87262266-87262285 | None:intergenic | 35.0% | |
| ATTAGACAGATTACACACAG+CGG | + | chr3.2:87263049-87263068 | None:intergenic | 35.0% | |
| ATTATTACTTGCTTCTCCCT+TGG | - | chr3.2:87262629-87262648 | MS.gene072889:intron | 35.0% | |
| CAACATTCAAGCAAAAACCA+AGG | - | chr3.2:87262767-87262786 | MS.gene072889:intron | 35.0% | |
| CAGATGGATATCAATGAAAG+CGG | + | chr3.2:87263518-87263537 | None:intergenic | 35.0% | |
| CCAAATTTAAAGGTTCCAGA+TGG | + | chr3.2:87263534-87263553 | None:intergenic | 35.0% | |
| CTGTTTAATTCAGAACAGGA+TGG | - | chr3.2:87261183-87261202 | MS.gene072889:CDS | 35.0% | |
| GAACAAACACTACACCAAAA+TGG | - | chr3.2:87261144-87261163 | MS.gene072889:CDS | 35.0% | |
| GAAGTCATATGAAGACTTCT+AGG | + | chr3.2:87261522-87261541 | None:intergenic | 35.0% | |
| GATCTTCTTTGTGGTTTCTT+TGG | + | chr3.2:87264442-87264461 | None:intergenic | 35.0% | |
| GATTGCTGCATAAATACAAC+TGG | + | chr3.2:87263909-87263928 | None:intergenic | 35.0% | |
| GCTCCCATAAAAATATCAAC+TGG | + | chr3.2:87264032-87264051 | None:intergenic | 35.0% | |
| GGTTCTTTCTTTATTAAGCG+TGG | + | chr3.2:87261983-87262002 | None:intergenic | 35.0% | |
| GTAGCAGAATCTCAATTGAA+TGG | - | chr3.2:87264697-87264716 | MS.gene072889:CDS | 35.0% | |
| GTAGCATCTTCTGTTTCAAA+TGG | - | chr3.2:87261582-87261601 | MS.gene072889:CDS | 35.0% | |
| GTGGTAAAGTGCATTTAATC+TGG | - | chr3.2:87263708-87263727 | MS.gene072889:intron | 35.0% | |
| TCTTGTACCAAAATGAGTTG+TGG | + | chr3.2:87264745-87264764 | None:intergenic | 35.0% | |
| TTATGCATATCTTATGGGAG+GGG | - | chr3.2:87262418-87262437 | MS.gene072889:intron | 35.0% | |
| TTATTCAAAGGAAACCCTCA+TGG | + | chr3.2:87262659-87262678 | None:intergenic | 35.0% | |
| TTCAGTTGTTACACTGGATA+AGG | + | chr3.2:87264557-87264576 | None:intergenic | 35.0% | |
| TTCCACTTCACTCTATCAAT+TGG | - | chr3.2:87263231-87263250 | MS.gene072889:intron | 35.0% | |
| TTGCTGCATAAATACAACTG+GGG | + | chr3.2:87263907-87263926 | None:intergenic | 35.0% | |
| TTTACTCTAAGCTTGAGGAA+AGG | - | chr3.2:87262718-87262737 | MS.gene072889:intron | 35.0% | |
| TTTCCTGGAAGATTATCAAG+GGG | + | chr3.2:87262004-87262023 | None:intergenic | 35.0% | |
| ! | AGACAAACCACAACTCATTT+TGG | - | chr3.2:87264735-87264754 | MS.gene072889:CDS | 35.0% |
| ! | CCATCTGGAACCTTTAAATT+TGG | - | chr3.2:87263531-87263550 | MS.gene072889:intron | 35.0% |
| ! | CTTTTCCTGGAAGATTATCA+AGG | + | chr3.2:87262006-87262025 | None:intergenic | 35.0% |
| ! | GGAGAAATCTAGGACAAAAA+AGG | - | chr3.2:87261461-87261480 | MS.gene072889:CDS | 35.0% |
| ! | TACATTTTCTTTCAGCACTC+TGG | - | chr3.2:87261820-87261839 | MS.gene072889:intron | 35.0% |
| !! | ATATGAAGACTTCTAGGACT+TGG | + | chr3.2:87261516-87261535 | None:intergenic | 35.0% |
| !! | GCTTGTTCTGAAATATTCCA+TGG | - | chr3.2:87263276-87263295 | MS.gene072889:CDS | 35.0% |
| !! | GTTGTTGATGAACACCATTT+TGG | + | chr3.2:87261161-87261180 | None:intergenic | 35.0% |
| AAACCCTCATGGTAATCCAA+GGG | + | chr3.2:87262648-87262667 | None:intergenic | 40.0% | |
| AACACTTCACTGGAAGATGA+TGG | - | chr3.2:87261117-87261136 | MS.gene072889:CDS | 40.0% | |
| AACAGGGCTAATTCCTTTAG+TGG | + | chr3.2:87264416-87264435 | None:intergenic | 40.0% | |
| AAGCTGAGATTAAGAGGCTT+AGG | - | chr3.2:87262888-87262907 | MS.gene072889:intron | 40.0% | |
| AATTGCTTAGCTCCAGTTAG+AGG | - | chr3.2:87263796-87263815 | MS.gene072889:intron | 40.0% | |
| ACAGGGCTAATTCCTTTAGT+GGG | + | chr3.2:87264415-87264434 | None:intergenic | 40.0% | |
| AGAAATCAAAGGTCGAGATG+TGG | + | chr3.2:87262850-87262869 | None:intergenic | 40.0% | |
| AGTTGTTACACTGGATAAGG+AGG | + | chr3.2:87264554-87264573 | None:intergenic | 40.0% | |
| ATTCTGTTGTGAAGTTGACG+TGG | + | chr3.2:87263779-87263798 | None:intergenic | 40.0% | |
| CACACCTATGTCTAGATAAG+TGG | + | chr3.2:87263689-87263708 | None:intergenic | 40.0% | |
| CACCAATTGATAGAGTGAAG+TGG | + | chr3.2:87263236-87263255 | None:intergenic | 40.0% | |
| CCACACATCAAATAGTGAAG+AGG | + | chr3.2:87261926-87261945 | None:intergenic | 40.0% | |
| CCTCAAGCTTAGAGTAAAAC+TGG | + | chr3.2:87262716-87262735 | None:intergenic | 40.0% | |
| CCTCTTCACTATTTGATGTG+TGG | - | chr3.2:87261923-87261942 | MS.gene072889:intron | 40.0% | |
| CGCTTTCATTGATATCCATC+TGG | - | chr3.2:87263516-87263535 | MS.gene072889:intron | 40.0% | |
| CTTATCTAGACATAGGTGTG+TGG | - | chr3.2:87263689-87263708 | MS.gene072889:intron | 40.0% | |
| GATGACCTACAATTAGCAGA+AGG | + | chr3.2:87262267-87262286 | None:intergenic | 40.0% | |
| GGATTCAGTTAACACTTCAC+TGG | - | chr3.2:87261107-87261126 | MS.gene072889:CDS | 40.0% | |
| GGTAACTTCAGTTGTTACAC+TGG | + | chr3.2:87264563-87264582 | None:intergenic | 40.0% | |
| GGTCGAGATGTGGTTAAAAA+AGG | + | chr3.2:87262840-87262859 | None:intergenic | 40.0% | |
| TAGCAGAAGGGTTCAAAATG+AGG | + | chr3.2:87262254-87262273 | None:intergenic | 40.0% | |
| TCGGTGAGAAAGAACAAAGA+CGG | - | chr3.2:87261540-87261559 | MS.gene072889:CDS | 40.0% | |
| TCTCAGAATAACCCCACTAA+AGG | - | chr3.2:87264400-87264419 | MS.gene072889:CDS | 40.0% | |
| TGAACCCTTCTGCTAATTGT+AGG | - | chr3.2:87262259-87262278 | MS.gene072889:intron | 40.0% | |
| TTAGACAGATTACACACAGC+GGG | + | chr3.2:87263048-87263067 | None:intergenic | 40.0% | |
| TTCACAAGTCCAAATGCTCA+AGG | + | chr3.2:87264249-87264268 | None:intergenic | 40.0% | |
| TTGGATGAACTGATCCTTTC+AGG | + | chr3.2:87264484-87264503 | None:intergenic | 40.0% | |
| TTTCTCTTCCCTTGTTGCAA+TGG | + | chr3.2:87264593-87264612 | None:intergenic | 40.0% | |
| ! | CCAGTTTTACTCTAAGCTTG+AGG | - | chr3.2:87262713-87262732 | MS.gene072889:intron | 40.0% |
| ! | GAAGATGATTCAGCTTTTCC+TGG | + | chr3.2:87262019-87262038 | None:intergenic | 40.0% |
| ! | GGAGATTTTGCTCTTGTAGT+TGG | + | chr3.2:87264280-87264299 | None:intergenic | 40.0% |
| !! | TCGTGTCGGTTCTGAAATTT+AGG | - | chr3.2:87263579-87263598 | MS.gene072889:intron | 40.0% |
| AACTGCACGGACTTCATCTA+AGG | - | chr3.2:87264510-87264529 | MS.gene072889:intron | 45.0% | |
| AAGGATTCATGCGAAGGAAG+TGG | - | chr3.2:87262737-87262756 | MS.gene072889:intron | 45.0% | |
| ACTCTTCTTACGACCAAGCT+TGG | + | chr3.2:87264302-87264321 | None:intergenic | 45.0% | |
| AGAGCAAAATCTCCCAAGCT+TGG | - | chr3.2:87264286-87264305 | MS.gene072889:CDS | 45.0% | |
| AGGGTTCAAAATGAGGCATG+AGG | + | chr3.2:87262247-87262266 | None:intergenic | 45.0% | |
| ATAAAGAAATCGCCCTGTCC+TGG | + | chr3.2:87262088-87262107 | None:intergenic | 45.0% | |
| ATGCCAAACCTCGTAGAGTT+GGG | - | chr3.2:87262539-87262558 | MS.gene072889:intron | 45.0% | |
| ATTGCCCAAGTCAAGCATGT+AGG | + | chr3.2:87263153-87263172 | None:intergenic | 45.0% | |
| CAAAGACGGAAAAGGTGAAG+AGG | - | chr3.2:87261554-87261573 | MS.gene072889:CDS | 45.0% | |
| CACCTTGTCCATTGCAACAA+GGG | - | chr3.2:87264582-87264601 | MS.gene072889:CDS | 45.0% | |
| CAGGGCTAATTCCTTTAGTG+GGG | + | chr3.2:87264414-87264433 | None:intergenic | 45.0% | |
| CATCCAATTCAGCAACTGCA+CGG | - | chr3.2:87264497-87264516 | MS.gene072889:intron | 45.0% | |
| CTCTTCTTACGACCAAGCTT+GGG | + | chr3.2:87264301-87264320 | None:intergenic | 45.0% | |
| CTTACTTGTGAGTGGAAACC+AGG | - | chr3.2:87262067-87262086 | MS.gene072889:intron | 45.0% | |
| GAAACCCTCATGGTAATCCA+AGG | + | chr3.2:87262649-87262668 | None:intergenic | 45.0% | |
| GGTTTGGCATCTTCTGATGT+AGG | + | chr3.2:87262529-87262548 | None:intergenic | 45.0% | |
| GTGGTTTCTTTGGCTGAACA+GGG | + | chr3.2:87264432-87264451 | None:intergenic | 45.0% | |
| GTTGGGACAATGCCAACTTA+TGG | - | chr3.2:87262556-87262575 | MS.gene072889:intron | 45.0% | |
| TCCACTTGTCTCATCAGACA+AGG | + | chr3.2:87264650-87264669 | None:intergenic | 45.0% | |
| TCGAGGATGAGAGTCTAAAG+TGG | + | chr3.2:87261613-87261632 | None:intergenic | 45.0% | |
| TCGATAGAAGCAAGTCAGTG+TGG | + | chr3.2:87261363-87261382 | None:intergenic | 45.0% | |
| TCTCCCTTGGATTACCATGA+GGG | - | chr3.2:87262642-87262661 | MS.gene072889:intron | 45.0% | |
| TGAGGAAAGGATTCATGCGA+AGG | - | chr3.2:87262731-87262750 | MS.gene072889:intron | 45.0% | |
| TGTGAAGTTGACGTGGCATT+TGG | + | chr3.2:87263772-87263791 | None:intergenic | 45.0% | |
| TGTGGTTTCTTTGGCTGAAC+AGG | + | chr3.2:87264433-87264452 | None:intergenic | 45.0% | |
| TTCCCTTGTTGCAATGGACA+AGG | + | chr3.2:87264587-87264606 | None:intergenic | 45.0% | |
| TTCTCCCTTGGATTACCATG+AGG | - | chr3.2:87262641-87262660 | MS.gene072889:intron | 45.0% | |
| TTCTTCAACTCCACCCTAGA+AGG | + | chr3.2:87262968-87262987 | None:intergenic | 45.0% | |
| TTGACTGCCCTGTTCTTAAC+CGG | + | chr3.2:87261639-87261658 | None:intergenic | 45.0% | |
| TTGGTACAAGAACCCATAGC+AGG | - | chr3.2:87264754-87264773 | MS.gene072889:CDS | 45.0% | |
| TTGTATGCAATCAGGCAGAC+AGG | + | chr3.2:87263023-87263042 | None:intergenic | 45.0% | |
| ! | GAACCCCTTGATAATCTTCC+AGG | - | chr3.2:87261998-87262017 | MS.gene072889:intron | 45.0% |
| !! | TCTGGCTCTATGTTCTGAGA+TGG | + | chr3.2:87264676-87264695 | None:intergenic | 45.0% |
| !! | TTCTAGGGTGGAGTTGAAGA+AGG | - | chr3.2:87262967-87262986 | MS.gene072889:CDS | 45.0% |
| !! | AATGTAAAAAAAAAAAATAA+AGG | + | chr3.2:87261806-87261825 | None:intergenic | 5.0% |
| AACTCCACCCTAGAAGGAGT+AGG | + | chr3.2:87262962-87262981 | None:intergenic | 50.0% | |
| ACGCACCTACATGCTTGACT+TGG | - | chr3.2:87263145-87263164 | MS.gene072889:CDS | 50.0% | |
| AGAAGCAAGTCAGTGTGGAG+AGG | + | chr3.2:87261358-87261377 | None:intergenic | 50.0% | |
| AGGGTGGAGTTGAAGAAGGT+TGG | - | chr3.2:87262971-87262990 | MS.gene072889:CDS | 50.0% | |
| AGTCCGTGCAGTTGCTGAAT+TGG | + | chr3.2:87264503-87264522 | None:intergenic | 50.0% | |
| ATCCTTTCAGGAGTCAGTCG+AGG | + | chr3.2:87264472-87264491 | None:intergenic | 50.0% | |
| CCACCTTGTCCATTGCAACA+AGG | - | chr3.2:87264581-87264600 | MS.gene072889:CDS | 50.0% | |
| CCTTGTTGCAATGGACAAGG+TGG | + | chr3.2:87264584-87264603 | None:intergenic | 50.0% | |
| CGCACCTACATGCTTGACTT+GGG | - | chr3.2:87263146-87263165 | MS.gene072889:CDS | 50.0% | |
| GATGCCAAACCTCGTAGAGT+TGG | - | chr3.2:87262538-87262557 | MS.gene072889:intron | 50.0% | |
| GATTCATGCGAAGGAAGTGG+AGG | - | chr3.2:87262740-87262759 | MS.gene072889:intron | 50.0% | |
| GCATGCACATCTGTGCACTT+GGG | + | chr3.2:87263125-87263144 | None:intergenic | 50.0% | |
| GCCAGGAAGCTGAGATTAAG+AGG | - | chr3.2:87262882-87262901 | MS.gene072889:intron | 50.0% | |
| GCCTCTTAATCTCAGCTTCC+TGG | + | chr3.2:87262886-87262905 | None:intergenic | 50.0% | |
| GCCTTGTCTGATGAGACAAG+TGG | - | chr3.2:87264646-87264665 | MS.gene072889:CDS | 50.0% | |
| GCGAGCTGAGAGAAGAAAAG+AGG | - | chr3.2:87262600-87262619 | MS.gene072889:intron | 50.0% | |
| GGAGGGAGAGATCTTCTTTG+TGG | + | chr3.2:87264451-87264470 | None:intergenic | 50.0% | |
| GTTGACGTGGCATTTGGATG+AGG | + | chr3.2:87263766-87263785 | None:intergenic | 50.0% | |
| TCCAATGCCAAGCTTCTACC+AGG | - | chr3.2:87262934-87262953 | MS.gene072889:CDS | 50.0% | |
| TCCTGGTAGAAGCTTGGCAT+TGG | + | chr3.2:87262938-87262957 | None:intergenic | 50.0% | |
| TCGACAGCCGGTTAAGAACA+GGG | - | chr3.2:87261629-87261648 | MS.gene072889:intron | 50.0% | |
| TGAAGCAGCTGCAGCTATTG+AGG | - | chr3.2:87264615-87264634 | MS.gene072889:CDS | 50.0% | |
| TGCACGGACTTCATCTAAGG+CGG | - | chr3.2:87264513-87264532 | MS.gene072889:intron | 50.0% | |
| TGCATGCACATCTGTGCACT+TGG | + | chr3.2:87263126-87263145 | None:intergenic | 50.0% | |
| TGTCCCAACTCTACGAGGTT+TGG | + | chr3.2:87262545-87262564 | None:intergenic | 50.0% | |
| TGTGAGTGGAAACCAGGACA+GGG | - | chr3.2:87262073-87262092 | MS.gene072889:intron | 50.0% | |
| TTGTGAGTGGAAACCAGGAC+AGG | - | chr3.2:87262072-87262091 | MS.gene072889:intron | 50.0% | |
| TTTCAGGAGTCAGTCGAGGA+GGG | + | chr3.2:87264468-87264487 | None:intergenic | 50.0% | |
| ! | AGCGGGCTTTGTATGCAATC+AGG | + | chr3.2:87263031-87263050 | None:intergenic | 50.0% |
| ! | GTGACTTGTACACGTCGTGT+CGG | - | chr3.2:87263565-87263584 | MS.gene072889:intron | 50.0% |
| ACCAGGAGCCTACTCCTTCT+AGG | - | chr3.2:87262951-87262970 | MS.gene072889:CDS | 55.0% | |
| AGACTCTCATCCTCGACAGC+CGG | - | chr3.2:87261617-87261636 | MS.gene072889:intron | 55.0% | |
| CAAGCAGACTCGACTGTCCA+AGG | - | chr3.2:87261662-87261681 | MS.gene072889:intron | 55.0% | |
| CCAGGAGCCTACTCCTTCTA+GGG | - | chr3.2:87262952-87262971 | MS.gene072889:CDS | 55.0% | |
| CGGAAAAGGTGAAGAGGCTG+CGG | - | chr3.2:87261560-87261579 | MS.gene072889:CDS | 55.0% | |
| CTCGACAGCCGGTTAAGAAC+AGG | - | chr3.2:87261628-87261647 | MS.gene072889:intron | 55.0% | |
| CTGTTCTTAACCGGCTGTCG+AGG | + | chr3.2:87261630-87261649 | None:intergenic | 55.0% | |
| CTTTCAGGAGTCAGTCGAGG+AGG | + | chr3.2:87264469-87264488 | None:intergenic | 55.0% | |
| GGCATTGTCCCAACTCTACG+AGG | + | chr3.2:87262550-87262569 | None:intergenic | 55.0% | |
| GTAGGCTCCTGGTAGAAGCT+TGG | + | chr3.2:87262944-87262963 | None:intergenic | 55.0% | |
| ! | CTCCTCGACTGACTCCTGAA+AGG | - | chr3.2:87264467-87264486 | MS.gene072889:intron | 55.0% |
| CCCTAGAAGGAGTAGGCTCC+TGG | + | chr3.2:87262955-87262974 | None:intergenic | 60.0% | |
| ! | GGAGCCTACTCCTTCTAGGG+TGG | - | chr3.2:87262955-87262974 | MS.gene072889:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 87261105 | 87264780 | 87261105 | ID=MS.gene072889 |
| chr3.2 | mRNA | 87261105 | 87264780 | 87261105 | ID=MS.gene072889.t1;Parent=MS.gene072889 |
| chr3.2 | exon | 87264541 | 87264780 | 87264541 | ID=MS.gene072889.t1.exon1;Parent=MS.gene072889.t1 |
| chr3.2 | CDS | 87264541 | 87264780 | 87264541 | ID=cds.MS.gene072889.t1;Parent=MS.gene072889.t1 |
| chr3.2 | exon | 87264202 | 87264453 | 87264202 | ID=MS.gene072889.t1.exon2;Parent=MS.gene072889.t1 |
| chr3.2 | CDS | 87264202 | 87264453 | 87264202 | ID=cds.MS.gene072889.t1;Parent=MS.gene072889.t1 |
| chr3.2 | exon | 87264010 | 87264050 | 87264010 | ID=MS.gene072889.t1.exon3;Parent=MS.gene072889.t1 |
| chr3.2 | CDS | 87264010 | 87264050 | 87264010 | ID=cds.MS.gene072889.t1;Parent=MS.gene072889.t1 |
| chr3.2 | exon | 87263847 | 87263918 | 87263847 | ID=MS.gene072889.t1.exon4;Parent=MS.gene072889.t1 |
| chr3.2 | CDS | 87263847 | 87263918 | 87263847 | ID=cds.MS.gene072889.t1;Parent=MS.gene072889.t1 |
| chr3.2 | exon | 87263264 | 87263360 | 87263264 | ID=MS.gene072889.t1.exon5;Parent=MS.gene072889.t1 |
| chr3.2 | CDS | 87263264 | 87263360 | 87263264 | ID=cds.MS.gene072889.t1;Parent=MS.gene072889.t1 |
| chr3.2 | exon | 87263097 | 87263168 | 87263097 | ID=MS.gene072889.t1.exon6;Parent=MS.gene072889.t1 |
| chr3.2 | CDS | 87263097 | 87263168 | 87263097 | ID=cds.MS.gene072889.t1;Parent=MS.gene072889.t1 |
| chr3.2 | exon | 87262897 | 87263007 | 87262897 | ID=MS.gene072889.t1.exon7;Parent=MS.gene072889.t1 |
| chr3.2 | CDS | 87262897 | 87263007 | 87262897 | ID=cds.MS.gene072889.t1;Parent=MS.gene072889.t1 |
| chr3.2 | exon | 87261105 | 87261611 | 87261105 | ID=MS.gene072889.t1.exon8;Parent=MS.gene072889.t1 |
| chr3.2 | CDS | 87261105 | 87261611 | 87261105 | ID=cds.MS.gene072889.t1;Parent=MS.gene072889.t1 |
| Gene Sequence |
| Protein sequence |
