Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015987.t1 | XP_003588767.2 | 91.4 | 463 | 36 | 2 | 1 | 463 | 1 | 459 | 1.70E-184 | 655.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015987.t1 | Q94C48 | 34.7 | 360 | 212 | 10 | 105 | 447 | 83 | 436 | 1.3e-28 | 129.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015987.t1 | G7I707 | 91.4 | 463 | 36 | 2 | 1 | 463 | 1 | 459 | 1.2e-184 | 655.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene015987 | MS.gene32634 | PPI |
| MS.gene014835 | MS.gene015987 | PPI |
| MS.gene015987 | MS.gene67065 | PPI |
| MS.gene67065 | MS.gene015987 | PPI |
| MS.gene015987 | MS.gene33200 | PPI |
| MS.gene61699 | MS.gene015987 | PPI |
| MS.gene015987 | MS.gene072889 | PPI |
| MS.gene015987 | MS.gene61699 | PPI |
| MS.gene015987 | MS.gene014835 | PPI |
| MS.gene015987 | MS.gene60284 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015987.t1 | MTR_1g012530 | 91.577 | 463 | 35 | 2 | 1 | 463 | 1 | 459 | 0.0 | 815 |
| MS.gene015987.t1 | MTR_1g012530 | 88.715 | 319 | 35 | 1 | 1 | 319 | 1 | 318 | 0.0 | 541 |
| MS.gene015987.t1 | MTR_3g107050 | 51.158 | 475 | 191 | 10 | 2 | 459 | 1 | 451 | 1.63e-134 | 395 |
| MS.gene015987.t1 | MTR_1g055085 | 60.145 | 138 | 52 | 2 | 228 | 365 | 233 | 367 | 8.36e-40 | 149 |
| MS.gene015987.t1 | MTR_7g106750 | 55.034 | 149 | 45 | 5 | 228 | 373 | 238 | 367 | 2.27e-36 | 139 |
| MS.gene015987.t1 | MTR_1g075310 | 48.855 | 131 | 62 | 2 | 230 | 355 | 217 | 347 | 3.12e-29 | 118 |
| MS.gene015987.t1 | MTR_1g080690 | 48.062 | 129 | 55 | 3 | 230 | 346 | 195 | 323 | 3.44e-25 | 106 |
| MS.gene015987.t1 | MTR_7g115310 | 48.031 | 127 | 62 | 1 | 221 | 347 | 207 | 329 | 5.80e-22 | 99.8 |
| MS.gene015987.t1 | MTR_6g022230 | 44.444 | 90 | 45 | 3 | 229 | 316 | 416 | 502 | 9.04e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015987.t1 | AT4G32330 | 43.081 | 383 | 178 | 12 | 2 | 375 | 1 | 352 | 4.35e-75 | 242 |
| MS.gene015987.t1 | AT4G32330 | 42.969 | 384 | 178 | 13 | 2 | 375 | 1 | 353 | 1.03e-73 | 239 |
| MS.gene015987.t1 | AT4G32330 | 42.969 | 384 | 178 | 13 | 2 | 375 | 1 | 353 | 1.03e-73 | 239 |
| MS.gene015987.t1 | AT4G32330 | 42.969 | 384 | 178 | 13 | 2 | 375 | 1 | 353 | 1.03e-73 | 239 |
| MS.gene015987.t1 | AT2G25480 | 49.813 | 267 | 117 | 7 | 143 | 403 | 99 | 354 | 1.30e-64 | 214 |
| MS.gene015987.t1 | AT2G25480 | 49.813 | 267 | 118 | 7 | 143 | 403 | 99 | 355 | 2.18e-64 | 213 |
| MS.gene015987.t1 | AT2G35880 | 75.000 | 96 | 23 | 1 | 228 | 323 | 245 | 339 | 9.38e-40 | 148 |
| MS.gene015987.t1 | AT2G35880 | 75.000 | 96 | 23 | 1 | 228 | 323 | 245 | 339 | 9.38e-40 | 148 |
| MS.gene015987.t1 | AT2G35880 | 75.000 | 96 | 23 | 1 | 228 | 323 | 245 | 339 | 9.38e-40 | 148 |
| MS.gene015987.t1 | AT3G23090 | 65.909 | 88 | 30 | 0 | 230 | 317 | 195 | 282 | 3.49e-28 | 114 |
| MS.gene015987.t1 | AT3G23090 | 65.909 | 88 | 30 | 0 | 230 | 317 | 196 | 283 | 3.55e-28 | 114 |
| MS.gene015987.t1 | AT3G23090 | 65.909 | 88 | 30 | 0 | 230 | 317 | 231 | 318 | 7.25e-28 | 114 |
| MS.gene015987.t1 | AT3G23090 | 63.043 | 92 | 30 | 1 | 230 | 317 | 195 | 286 | 2.36e-27 | 112 |
| MS.gene015987.t1 | AT3G23090 | 63.043 | 92 | 30 | 1 | 230 | 317 | 231 | 322 | 4.00e-27 | 112 |
| MS.gene015987.t1 | AT5G28646 | 47.154 | 123 | 59 | 2 | 222 | 342 | 84 | 202 | 6.28e-24 | 99.4 |
| MS.gene015987.t1 | AT5G28646 | 47.154 | 123 | 59 | 2 | 222 | 342 | 84 | 202 | 6.28e-24 | 99.4 |
| MS.gene015987.t1 | AT5G28646 | 47.154 | 123 | 59 | 2 | 222 | 342 | 80 | 198 | 6.62e-24 | 99.4 |
| MS.gene015987.t1 | AT3G04630 | 54.444 | 90 | 39 | 1 | 227 | 314 | 127 | 216 | 9.91e-23 | 98.2 |
| MS.gene015987.t1 | AT3G04630 | 54.444 | 90 | 39 | 1 | 227 | 314 | 123 | 212 | 9.98e-23 | 98.2 |
| MS.gene015987.t1 | AT3G04630 | 54.444 | 90 | 39 | 1 | 227 | 314 | 122 | 211 | 1.00e-22 | 98.2 |
| MS.gene015987.t1 | AT1G54460 | 45.378 | 119 | 60 | 2 | 206 | 323 | 145 | 259 | 1.11e-21 | 96.3 |
| MS.gene015987.t1 | AT1G70950 | 50.000 | 86 | 39 | 1 | 229 | 310 | 328 | 413 | 5.67e-19 | 89.7 |
Find 112 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAATTATGGATTCAGTTTC+AGG | 0.129280 | 1.4:+8525148 | MS.gene015987:CDS |
| CTGAAACTGAATCCATAATT+TGG | 0.234073 | 1.4:-8525147 | None:intergenic |
| GTGGGGACACTTCCAAATTA+TGG | 0.282695 | 1.4:+8525135 | MS.gene015987:CDS |
| CACGACGAACCTTCTAATTC+TGG | 0.301211 | 1.4:+8523866 | MS.gene015987:CDS |
| TTGCCTGCTGATGGACTTGA+TGG | 0.301418 | 1.4:+8523824 | MS.gene015987:CDS |
| TCCATTGCCAACTTTCTATC+AGG | 0.308595 | 1.4:+8525518 | MS.gene015987:CDS |
| TTTCTCTTCCCCTGTAGCTT+TGG | 0.321630 | 1.4:-8527919 | None:intergenic |
| ATGGAGTTGCTTTAAAAGTT+AGG | 0.333174 | 1.4:-8525500 | None:intergenic |
| CAGCGGTGTTAATGCAAGTT+TGG | 0.358129 | 1.4:+8524243 | MS.gene015987:CDS |
| ACATCAGAAGACGCTGCTTC+AGG | 0.363490 | 1.4:-8524776 | None:intergenic |
| TGCAGGTGCAGCTGCTGAAT+TGG | 0.371251 | 1.4:-8527865 | None:intergenic |
| TCAGCAGGCAAAGGATTAAC+TGG | 0.373496 | 1.4:-8523812 | None:intergenic |
| GTTCGTCGTGAACACCGTTT+TGG | 0.381078 | 1.4:-8523853 | None:intergenic |
| GACGCTGCTTCAGGCTTTGA+AGG | 0.389307 | 1.4:-8524767 | None:intergenic |
| CTTCTCCTTGAACTTTATCA+AGG | 0.390003 | 1.4:-8524939 | None:intergenic |
| TAAGGTTGAGGAAAAGATTC+AGG | 0.390503 | 1.4:+8525315 | MS.gene015987:CDS |
| TTCTTTGTTGACCTGGATGC+AGG | 0.395862 | 1.4:-8527882 | None:intergenic |
| AGCTGCTGAATTGGAAGAAT+TGG | 0.396114 | 1.4:-8527856 | None:intergenic |
| GTCTTCTTCCGACCAAGCTT+GGG | 0.398482 | 1.4:-8527666 | None:intergenic |
| CAGTTGGAAAGCACTGGAAC+TGG | 0.409681 | 1.4:+8523977 | MS.gene015987:CDS |
| GGAACAGTCAAGAGCACAAA+AGG | 0.414883 | 1.4:+8524180 | MS.gene015987:CDS |
| CTTCCTAAGCTTTCTAATCT+CGG | 0.418203 | 1.4:-8525475 | None:intergenic |
| GTTAATCCTTTGCCTGCTGA+TGG | 0.423284 | 1.4:+8523815 | MS.gene015987:CDS |
| TGTCCCCACTCTGCGAGGTT+TGG | 0.435993 | 1.4:-8525121 | None:intergenic |
| AGTCTTCTTCCGACCAAGCT+TGG | 0.436954 | 1.4:-8527667 | None:intergenic |
| ACTAGCTTATCCAAAGCTAC+AGG | 0.441373 | 1.4:+8527909 | MS.gene015987:CDS |
| AGCTCCACCTTAGGAGGAGC+AGG | 0.446075 | 1.4:-8525543 | None:intergenic |
| CCATCCTCTCCAGAATTAGA+AGG | 0.447912 | 1.4:-8523875 | None:intergenic |
| TTTGCATTCTTATTCTTGAC+AGG | 0.449148 | 1.4:-8524205 | None:intergenic |
| ACCTTCTTCAGCTCCACCTT+AGG | 0.458299 | 1.4:-8525552 | None:intergenic |
| GACAAGGGTATCTCCTTTAG+TGG | 0.463423 | 1.4:-8527778 | None:intergenic |
| TTGTGAGCAGTTCCTCACTA+AGG | 0.463940 | 1.4:+8525297 | MS.gene015987:intron |
| TTCTGAAAATATCAATCAGT+TGG | 0.465513 | 1.4:+8523961 | MS.gene015987:CDS |
| TGTGCTCTTGACTGTTCCGT+TGG | 0.466042 | 1.4:-8524175 | None:intergenic |
| CAATAATTTGATCGTTTCAA+AGG | 0.466984 | 1.4:+8524048 | MS.gene015987:CDS |
| AGTATCTTTCTTTGTTGACC+TGG | 0.468982 | 1.4:-8527889 | None:intergenic |
| AATTCAGAGTCTGATGGAAA+TGG | 0.469317 | 1.4:+8527696 | MS.gene015987:CDS |
| CGACGTTGGAAAAGACAAAC+AGG | 0.474837 | 1.4:+8524276 | MS.gene015987:CDS |
| TCAGGAGCCTGCTCCTCCTA+AGG | 0.477024 | 1.4:+8525536 | MS.gene015987:CDS |
| TTCACAAGACATTCTTCACT+TGG | 0.478405 | 1.4:-8528032 | None:intergenic |
| TTCTCCTTGAACTTTATCAA+GGG | 0.481497 | 1.4:-8524938 | None:intergenic |
| GCGGTGAACGAGCCGAGAAA+AGG | 0.484677 | 1.4:+8525172 | MS.gene015987:CDS |
| GCATCATCCGCTGTCTCAAA+TGG | 0.487290 | 1.4:+8524298 | MS.gene015987:CDS |
| TTCTTCAGCTCCACCTTAGG+AGG | 0.495466 | 1.4:-8525549 | None:intergenic |
| ATCAATCAGTTGGAAAGCAC+TGG | 0.499209 | 1.4:+8523971 | MS.gene015987:CDS |
| CCGCTCATTCAATGATCGGC+AGG | 0.502367 | 1.4:+8524363 | MS.gene015987:CDS |
| GGACCCCTTGATAAAGTTCA+AGG | 0.509202 | 1.4:+8524934 | MS.gene015987:CDS |
| TCTTCACTTGGCTTATCTGA+AGG | 0.516242 | 1.4:-8528020 | None:intergenic |
| CAGAAGCAAGTCGAGTAGGA+AGG | 0.516976 | 1.4:-8527827 | None:intergenic |
| TTCTGTATTTACAGTAACAT+GGG | 0.519769 | 1.4:-8523918 | None:intergenic |
| TCTGAAGGAACCGCATTATG+AGG | 0.520062 | 1.4:-8528005 | None:intergenic |
| ACAGAAACTGTTGTTCCAGA+TGG | 0.529358 | 1.4:+8523935 | MS.gene015987:CDS |
| CAGCAGCTGCACCTGCATCC+AGG | 0.529437 | 1.4:+8527871 | MS.gene015987:CDS |
| AACTGGAAACTCGTCTATGA+AGG | 0.533703 | 1.4:+8523994 | MS.gene015987:CDS |
| AATAAGAATGCAAAGGTTGG+TGG | 0.536003 | 1.4:+8524214 | MS.gene015987:CDS |
| TTTCTGTATTTACAGTAACA+TGG | 0.539403 | 1.4:-8523919 | None:intergenic |
| AAGAATAAGAATGCAAAGGT+TGG | 0.541032 | 1.4:+8524211 | MS.gene015987:CDS |
| AGAAGCAAGTCGAGTAGGAA+GGG | 0.545934 | 1.4:-8527826 | None:intergenic |
| TCACAAGGAAACTCCACTAA+AGG | 0.546027 | 1.4:+8527765 | MS.gene015987:CDS |
| CCTTCTAATTCTGGAGAGGA+TGG | 0.547143 | 1.4:+8523875 | MS.gene015987:CDS |
| AAAGATTCAGGCAAAGGAGG+AGG | 0.547835 | 1.4:+8525327 | MS.gene015987:CDS |
| TCCTAAGGTGGAGCTGAAGA+AGG | 0.549377 | 1.4:+8525551 | MS.gene015987:CDS |
| TCTCCTTGAACTTTATCAAG+GGG | 0.551027 | 1.4:-8524937 | None:intergenic |
| CAAAATCTCCCAAGCTTGGT+CGG | 0.552099 | 1.4:+8527658 | MS.gene015987:CDS |
| CAAACTTGCATTAACACCGC+TGG | 0.555031 | 1.4:-8524242 | None:intergenic |
| AGAGCAAAATCTCCCAAGCT+TGG | 0.555915 | 1.4:+8527654 | MS.gene015987:CDS |
| CTAGCTTATCCAAAGCTACA+GGG | 0.558761 | 1.4:+8527910 | MS.gene015987:CDS |
| TGAGGAAAAGATTCAGGCAA+AGG | 0.563894 | 1.4:+8525321 | MS.gene015987:CDS |
| GCTCAATGCACAGTCATGAT+CGG | 0.564147 | 1.4:-8528104 | None:intergenic |
| TCAACAAATTCAGAGTCTGA+TGG | 0.564610 | 1.4:+8527690 | MS.gene015987:CDS |
| GATGCCAAACCTCGCAGAGT+GGG | 0.564785 | 1.4:+8525117 | MS.gene015987:CDS |
| GCAGGCTCCTGATAGAAAGT+TGG | 0.569966 | 1.4:-8525525 | None:intergenic |
| AGGCCGAGATTAGAAAGCTT+AGG | 0.571850 | 1.4:+8525472 | MS.gene015987:CDS |
| CTTGATGGTGTCCACCAAAA+CGG | 0.575182 | 1.4:+8523839 | MS.gene015987:CDS |
| AAAACCGCTCATTCAATGAT+CGG | 0.576323 | 1.4:+8524359 | MS.gene015987:CDS |
| AGGTTTGGCATCCTCAGTGT+TGG | 0.579725 | 1.4:-8525106 | None:intergenic |
| CTTTCAGAAGCAAGTCGAGT+AGG | 0.581698 | 1.4:-8527831 | None:intergenic |
| CTACTCGACTTGCTTCTGAA+AGG | 0.582535 | 1.4:+8527832 | MS.gene015987:CDS |
| ACACCATCAAGTCCATCAGC+AGG | 0.591707 | 1.4:-8523827 | None:intergenic |
| GGAGCCTGCTCCTCCTAAGG+TGG | 0.600395 | 1.4:+8525539 | MS.gene015987:CDS |
| TCTTGTGACAACACGAGCTG+AGG | 0.603555 | 1.4:-8528080 | None:intergenic |
| AGTGAAGAATGTCTTGTGAA+TGG | 0.604525 | 1.4:+8528035 | MS.gene015987:CDS |
| TCTTGTGAATGGTGACATAG+TGG | 0.607830 | 1.4:+8528046 | MS.gene015987:CDS |
| TCAAGTCCATCAGCAGGCAA+AGG | 0.607953 | 1.4:-8523821 | None:intergenic |
| GGAAAAGATTCAGGCAAAGG+AGG | 0.608287 | 1.4:+8525324 | MS.gene015987:CDS |
| GAACAGTCAAGAGCACAAAA+GGG | 0.609638 | 1.4:+8524181 | MS.gene015987:CDS |
| AGTGAAAATAAAAGTTCCAA+CGG | 0.609860 | 1.4:+8524159 | MS.gene015987:CDS |
| TCGGCAGGCTCAACTGTCCA+AGG | 0.618945 | 1.4:+8524378 | MS.gene015987:CDS |
| TCTGTATTTACAGTAACATG+GGG | 0.619012 | 1.4:-8523917 | None:intergenic |
| GCAGTTCCTCACTAAGGTTG+AGG | 0.619309 | 1.4:+8525303 | MS.gene015987:intron |
| TCCTGATAGAAAGTTGGCAA+TGG | 0.619813 | 1.4:-8525519 | None:intergenic |
| CCTGCCGATCATTGAATGAG+CGG | 0.621740 | 1.4:-8524363 | None:intergenic |
| ATGCCAAACCTCGCAGAGTG+GGG | 0.623165 | 1.4:+8525118 | MS.gene015987:CDS |
| AACATTTGTATCACTTGACA+AGG | 0.624464 | 1.4:-8527976 | None:intergenic |
| TGTCAAGAATAAGAATGCAA+AGG | 0.625023 | 1.4:+8524207 | MS.gene015987:CDS |
| GGTAGCTGCAGTTCTCGACA+AGG | 0.636601 | 1.4:+8527717 | MS.gene015987:CDS |
| TCGTCTATGAAGGAAATCGA+AGG | 0.639138 | 1.4:+8524004 | MS.gene015987:CDS |
| GGAAGTGTCCCCACTCTGCG+AGG | 0.641410 | 1.4:-8525126 | None:intergenic |
| AGAAGTGCCATTTGAGACAG+CGG | 0.643689 | 1.4:-8524305 | None:intergenic |
| TAGCTTGCAAGCAAAATCCA+AGG | 0.644380 | 1.4:+8525357 | MS.gene015987:CDS |
| AAGGTTGGTGGTAGTTCCAG+CGG | 0.645340 | 1.4:+8524226 | MS.gene015987:CDS |
| TAGCTTATCCAAAGCTACAG+GGG | 0.645381 | 1.4:+8527911 | MS.gene015987:CDS |
| ACGAGCCGAGAAAAGGAGAG+AGG | 0.654233 | 1.4:+8525179 | MS.gene015987:CDS |
| CTGAACGAGAAAGTGTCACA+AGG | 0.655908 | 1.4:+8527750 | MS.gene015987:CDS |
| CGAACCTTCTAATTCTGGAG+AGG | 0.658571 | 1.4:+8523871 | MS.gene015987:CDS |
| TGTTGCTCTACCTCATAATG+CGG | 0.662005 | 1.4:+8527995 | MS.gene015987:CDS |
| GGATGCCAAACCTCGCAGAG+TGG | 0.669063 | 1.4:+8525116 | MS.gene015987:CDS |
| GTAGGAAGGGACTTTCGTAG+TGG | 0.671200 | 1.4:-8527813 | None:intergenic |
| TATGGATTCAGTTTCAGGTG+CGG | 0.674466 | 1.4:+8525153 | MS.gene015987:CDS |
| CGAAGGATCGAATGACAACG+TGG | 0.698275 | 1.4:+8524021 | MS.gene015987:CDS |
| CTGTATTTACAGTAACATGG+GGG | 0.709302 | 1.4:-8523916 | None:intergenic |
| TCTTAAAAGTACCAACACTG+AGG | 0.757340 | 1.4:+8525095 | MS.gene015987:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAATAAGATTATGTAA+AGG | - | chr1.4:8527454-8527473 | None:intergenic | 10.0% |
| !!! | ATTTTTATTTATACTAGAAA+AGG | + | chr1.4:8527193-8527212 | MS.gene015987:intron | 10.0% |
| !!! | TATAATAATTTTTAGAATTC+AGG | - | chr1.4:8526682-8526701 | None:intergenic | 10.0% |
| !!! | TTTTCTAGTATAAATAAAAA+TGG | - | chr1.4:8527194-8527213 | None:intergenic | 10.0% |
| !! | AAAAAAAAATTAGGTTTCAA+AGG | - | chr1.4:8526859-8526878 | None:intergenic | 15.0% |
| !! | AAAAACAAAATCATTGAAAA+AGG | + | chr1.4:8524912-8524931 | MS.gene015987:CDS | 15.0% |
| !! | AAAACAAAATCATTGAAAAA+GGG | + | chr1.4:8524913-8524932 | MS.gene015987:CDS | 15.0% |
| !! | AGTAAAAATGATACTTATAA+GGG | + | chr1.4:8524841-8524860 | MS.gene015987:intron | 15.0% |
| !! | TAGTAAAAATGATACTTATA+AGG | + | chr1.4:8524840-8524859 | MS.gene015987:intron | 15.0% |
| !!! | TAAACTATTTCTATAGTTAA+GGG | + | chr1.4:8524639-8524658 | MS.gene015987:intron | 15.0% |
| !!! | TTAAACTATTTCTATAGTTA+AGG | + | chr1.4:8524638-8524657 | MS.gene015987:intron | 15.0% |
| !! | ATACGGATATATGAAATAAA+AGG | + | chr1.4:8526329-8526348 | MS.gene015987:intron | 20.0% |
| !! | CAACAAATAAGATTATGTAA+AGG | - | chr1.4:8527350-8527369 | None:intergenic | 20.0% |
| !! | CATTAGATAATCTGAAAATA+TGG | + | chr1.4:8526384-8526403 | MS.gene015987:intron | 20.0% |
| !! | GATAGTTTATGAATAATCTA+AGG | + | chr1.4:8524610-8524629 | MS.gene015987:intron | 20.0% |
| !! | TAAATAAACTCATAAGAGAA+AGG | - | chr1.4:8524982-8525001 | None:intergenic | 20.0% |
| !! | TACTCTTAAGATTTATAGTT+TGG | + | chr1.4:8524706-8524725 | MS.gene015987:intron | 20.0% |
| !! | TCATATATCCGTATAAATAA+TGG | - | chr1.4:8526323-8526342 | None:intergenic | 20.0% |
| !! | TCTAAATCAGTTATATGATT+TGG | + | chr1.4:8524103-8524122 | MS.gene015987:intron | 20.0% |
| !! | TTATTTATACTAGAAAAGGT+TGG | + | chr1.4:8527197-8527216 | MS.gene015987:intron | 20.0% |
| !! | TTGTAAGACCATTATTTATA+CGG | + | chr1.4:8526312-8526331 | MS.gene015987:intron | 20.0% |
| !!! | ACTATTTTAAAAGTAACTGA+GGG | - | chr1.4:8524560-8524579 | None:intergenic | 20.0% |
| !!! | AGATAATTTTCAAATCTGAA+TGG | - | chr1.4:8526948-8526967 | None:intergenic | 20.0% |
| !!! | AGATTTTCTTGTTTAAGAAA+AGG | - | chr1.4:8525922-8525941 | None:intergenic | 20.0% |
| !!! | ATAATTTTTAGAATTCAGGT+TGG | - | chr1.4:8526678-8526697 | None:intergenic | 20.0% |
| !!! | TAATATATTTGCTTTGTTCT+AGG | + | chr1.4:8524129-8524148 | MS.gene015987:intron | 20.0% |
| !!! | TAATTATGATTTGGTTATTG+TGG | + | chr1.4:8526880-8526899 | MS.gene015987:intron | 20.0% |
| !!! | TAATTTTTAGAATTCAGGTT+GGG | - | chr1.4:8526677-8526696 | None:intergenic | 20.0% |
| !!! | TACTATTTTAAAAGTAACTG+AGG | - | chr1.4:8524561-8524580 | None:intergenic | 20.0% |
| !!! | TATTGTGGCTTTTAAAATTA+TGG | + | chr1.4:8526895-8526914 | MS.gene015987:intron | 20.0% |
| !!! | TATTTTCAGATTATCTAATG+TGG | - | chr1.4:8526384-8526403 | None:intergenic | 20.0% |
| !!! | TTATCTAAAACAGAAAGAAA+AGG | - | chr1.4:8524498-8524517 | None:intergenic | 20.0% |
| !!! | TTTTCTTAAACAAGAAAATC+TGG | + | chr1.4:8525921-8525940 | MS.gene015987:intron | 20.0% |
| ! | AAAATAGAAGAAGACACAAA+AGG | - | chr1.4:8524474-8524493 | None:intergenic | 25.0% |
| ! | AAAGCAAACAAAAAATCTTC+TGG | - | chr1.4:8525745-8525764 | None:intergenic | 25.0% |
| ! | AGTGAAAATAAAAGTTCCAA+CGG | + | chr1.4:8524159-8524178 | MS.gene015987:CDS | 25.0% |
| ! | ATTGTGATTTCAATTTCAGT+TGG | + | chr1.4:8526744-8526763 | MS.gene015987:intron | 25.0% |
| ! | CAATAATTTGATCGTTTCAA+AGG | + | chr1.4:8524048-8524067 | MS.gene015987:CDS | 25.0% |
| ! | GAATTACTGACATGATTAAA+AGG | - | chr1.4:8525428-8525447 | None:intergenic | 25.0% |
| ! | TAGAACAAGTTTATAGTTCA+GGG | + | chr1.4:8524579-8524598 | MS.gene015987:intron | 25.0% |
| ! | TCAAGATATAACTACGTATA+TGG | + | chr1.4:8526712-8526731 | MS.gene015987:intron | 25.0% |
| ! | TCTGAAAATATGGTTATAAG+TGG | + | chr1.4:8526394-8526413 | MS.gene015987:intron | 25.0% |
| ! | TGCTTATTAAACACATCATT+GGG | + | chr1.4:8527269-8527288 | MS.gene015987:intron | 25.0% |
| ! | TTCTGTATTTACAGTAACAT+GGG | - | chr1.4:8523921-8523940 | None:intergenic | 25.0% |
| ! | TTTCTGTATTTACAGTAACA+TGG | - | chr1.4:8523922-8523941 | None:intergenic | 25.0% |
| !! | AGTAATTCTCACACTTTTAT+AGG | + | chr1.4:8525440-8525459 | MS.gene015987:intron | 25.0% |
| !! | ATATTTTCAGAATTTCCATC+TGG | - | chr1.4:8523953-8523972 | None:intergenic | 25.0% |
| !! | TTCTGAAAATATCAATCAGT+TGG | + | chr1.4:8523961-8523980 | MS.gene015987:CDS | 25.0% |
| !! | TTTAGCTCATTATAGTGATT+TGG | + | chr1.4:8526246-8526265 | MS.gene015987:intron | 25.0% |
| !!! | AAAAGTTTGGTCTTATCATT+TGG | + | chr1.4:8527579-8527598 | MS.gene015987:intron | 25.0% |
| !!! | ATTGATGCTGATTTTTTTCA+TGG | - | chr1.4:8525950-8525969 | None:intergenic | 25.0% |
| !!! | ATTGTTTTTTTCCTGTTATC+TGG | + | chr1.4:8527316-8527335 | MS.gene015987:intron | 25.0% |
| !!! | TATGATGATGTGTATTTTTG+TGG | + | chr1.4:8525062-8525081 | MS.gene015987:intron | 25.0% |
| !!! | TTGTTTTTTTCCTGTTATCT+GGG | + | chr1.4:8527317-8527336 | MS.gene015987:intron | 25.0% |
| AACATTTGTATCACTTGACA+AGG | - | chr1.4:8527979-8527998 | None:intergenic | 30.0% | |
| AACTATCACTCTCTCTTATT+TGG | - | chr1.4:8524666-8524685 | None:intergenic | 30.0% | |
| AAGAAATATCATATCTGTGG+AGG | + | chr1.4:8526289-8526308 | MS.gene015987:intron | 30.0% | |
| AAGAATAAGAATGCAAAGGT+TGG | + | chr1.4:8524211-8524230 | MS.gene015987:CDS | 30.0% | |
| AAGCTTATTCAAATGAAACC+TGG | - | chr1.4:8525247-8525266 | None:intergenic | 30.0% | |
| ACAGCATTTGGTAAAAATGA+GGG | - | chr1.4:8527503-8527522 | None:intergenic | 30.0% | |
| ACAGGAAAAAAACAATCAAG+AGG | - | chr1.4:8527312-8527331 | None:intergenic | 30.0% | |
| ACATTTGGGAAGAAAAACAA+AGG | - | chr1.4:8524419-8524438 | None:intergenic | 30.0% | |
| ATTAAACACATCATTGGGAA+AGG | + | chr1.4:8527274-8527293 | MS.gene015987:intron | 30.0% | |
| CAAATTATGGATTCAGTTTC+AGG | + | chr1.4:8525148-8525167 | MS.gene015987:CDS | 30.0% | |
| CAGGAAAAAAACAATCAAGA+GGG | - | chr1.4:8527311-8527330 | None:intergenic | 30.0% | |
| CCAGAAAATATGTTTACAAG+TGG | + | chr1.4:8526607-8526626 | MS.gene015987:intron | 30.0% | |
| CTGAAACTGAATCCATAATT+TGG | - | chr1.4:8525150-8525169 | None:intergenic | 30.0% | |
| CTGCTTATTAAACACATCAT+TGG | + | chr1.4:8527268-8527287 | MS.gene015987:intron | 30.0% | |
| GAAAATATGGTTATAAGTGG+TGG | + | chr1.4:8526397-8526416 | MS.gene015987:intron | 30.0% | |
| GAGTTCCTAAGTAAACATTT+GGG | - | chr1.4:8524433-8524452 | None:intergenic | 30.0% | |
| GCTAAGAAATATCATATCTG+TGG | + | chr1.4:8526286-8526305 | MS.gene015987:intron | 30.0% | |
| GTAACCCATTTAAAAACTTC+TGG | - | chr1.4:8527556-8527575 | None:intergenic | 30.0% | |
| GTAGAACAAGTTTATAGTTC+AGG | + | chr1.4:8524578-8524597 | MS.gene015987:intron | 30.0% | |
| TAAACCATCTACTGATAAGA+GGG | - | chr1.4:8527051-8527070 | None:intergenic | 30.0% | |
| TAACTCAACCCTAAGAAAAT+CGG | - | chr1.4:8526441-8526460 | None:intergenic | 30.0% | |
| TAATGTATGTGTTTATGCGA+GGG | + | chr1.4:8525776-8525795 | MS.gene015987:intron | 30.0% | |
| TCTGTATTTACAGTAACATG+GGG | - | chr1.4:8523920-8523939 | None:intergenic | 30.0% | |
| TCTTATCAGTAGATGGTTTA+GGG | + | chr1.4:8527051-8527070 | MS.gene015987:intron | 30.0% | |
| TCTTCTGCAATTTATATCTC+AGG | - | chr1.4:8526201-8526220 | None:intergenic | 30.0% | |
| TGAAACTTAACATGCTAAAC+AGG | - | chr1.4:8525897-8525916 | None:intergenic | 30.0% | |
| TGAGTTCCTAAGTAAACATT+TGG | - | chr1.4:8524434-8524453 | None:intergenic | 30.0% | |
| TGTCAAGAATAAGAATGCAA+AGG | + | chr1.4:8524207-8524226 | MS.gene015987:CDS | 30.0% | |
| TTAAACACATCATTGGGAAA+GGG | + | chr1.4:8527275-8527294 | MS.gene015987:intron | 30.0% | |
| TTCTCCTTGAACTTTATCAA+GGG | - | chr1.4:8524941-8524960 | None:intergenic | 30.0% | |
| TTCTTCCCAAATGTTTACTT+AGG | + | chr1.4:8524425-8524444 | MS.gene015987:intron | 30.0% | |
| TTTGCATTCTTATTCTTGAC+AGG | - | chr1.4:8524208-8524227 | None:intergenic | 30.0% | |
| ! | AATTTAACTTCTGTATCCTC+TGG | + | chr1.4:8527604-8527623 | MS.gene015987:intron | 30.0% |
| ! | ACATGTGATCTATTGATTAC+AGG | + | chr1.4:8524881-8524900 | MS.gene015987:intron | 30.0% |
| ! | AGCTTCCAGAAGTTTTTAAA+TGG | + | chr1.4:8527548-8527567 | MS.gene015987:intron | 30.0% |
| ! | CATAGTTCTACATTTGCAAT+AGG | - | chr1.4:8525010-8525029 | None:intergenic | 30.0% |
| ! | CATGTGATCTATTGATTACA+GGG | + | chr1.4:8524882-8524901 | MS.gene015987:intron | 30.0% |
| ! | CCACTTGTAAACATATTTTC+TGG | - | chr1.4:8526610-8526629 | None:intergenic | 30.0% |
| ! | GCTTCCAGAAGTTTTTAAAT+GGG | + | chr1.4:8527549-8527568 | MS.gene015987:intron | 30.0% |
| ! | TAAGATAAGAGTACACAACA+AGG | - | chr1.4:8525697-8525716 | None:intergenic | 30.0% |
| ! | TGATTTTCCTTTTCTTGAGT+TGG | + | chr1.4:8524076-8524095 | MS.gene015987:intron | 30.0% |
| ! | TTAGGTTTCAAAGGAGATTT+TGG | - | chr1.4:8526850-8526869 | None:intergenic | 30.0% |
| ! | TTGAATGAGCGGTTTTTAAT+AGG | - | chr1.4:8524355-8524374 | None:intergenic | 30.0% |
| !! | AATGGGTTACTGTAAAAGTT+TGG | + | chr1.4:8527566-8527585 | MS.gene015987:intron | 30.0% |
| !! | ATGGAGTTGCTTTAAAAGTT+AGG | - | chr1.4:8525503-8525522 | None:intergenic | 30.0% |
| !! | TGGTACTTTTAAGAGGATTA+AGG | - | chr1.4:8525089-8525108 | None:intergenic | 30.0% |
| !!! | TGTGGCTTTTAAAATTATGG+TGG | + | chr1.4:8526898-8526917 | MS.gene015987:intron | 30.0% |
| AAAACCGCTCATTCAATGAT+CGG | + | chr1.4:8524359-8524378 | MS.gene015987:CDS | 35.0% | |
| AAATGCTGTGTGAAAGTTCT+TGG | + | chr1.4:8527514-8527533 | MS.gene015987:intron | 35.0% | |
| AACCTGGATAATGATACCAA+AGG | - | chr1.4:8525231-8525250 | None:intergenic | 35.0% | |
| AAGAACTTTCACACAGCATT+TGG | - | chr1.4:8527515-8527534 | None:intergenic | 35.0% | |
| AATAAGAATGCAAAGGTTGG+TGG | + | chr1.4:8524214-8524233 | MS.gene015987:CDS | 35.0% | |
| AATTCAGAGTCTGATGGAAA+TGG | + | chr1.4:8527696-8527715 | MS.gene015987:CDS | 35.0% | |
| AGAGAAACCAACTCAAGAAA+AGG | - | chr1.4:8524086-8524105 | None:intergenic | 35.0% | |
| AGAGTCTATCCAATATCCAT+TGG | + | chr1.4:8526489-8526508 | MS.gene015987:intron | 35.0% | |
| AGTATCTTTCTTTGTTGACC+TGG | - | chr1.4:8527892-8527911 | None:intergenic | 35.0% | |
| AGTGAAGAATGTCTTGTGAA+TGG | + | chr1.4:8528035-8528054 | MS.gene015987:CDS | 35.0% | |
| AGTTCTACATTTGCAATAGG+AGG | - | chr1.4:8525007-8525026 | None:intergenic | 35.0% | |
| ATGCAAAATCAGTTGGAAGA+AGG | - | chr1.4:8526023-8526042 | None:intergenic | 35.0% | |
| CACAGCATTTGGTAAAAATG+AGG | - | chr1.4:8527504-8527523 | None:intergenic | 35.0% | |
| CAGCATTTGGTAAAAATGAG+GGG | - | chr1.4:8527502-8527521 | None:intergenic | 35.0% | |
| CATGCTAAACAGGCAATTAT+AGG | - | chr1.4:8525887-8525906 | None:intergenic | 35.0% | |
| CTAAACCATCTACTGATAAG+AGG | - | chr1.4:8527052-8527071 | None:intergenic | 35.0% | |
| CTCTTATCAGTAGATGGTTT+AGG | + | chr1.4:8527050-8527069 | MS.gene015987:intron | 35.0% | |
| CTGTATTTACAGTAACATGG+GGG | - | chr1.4:8523919-8523938 | None:intergenic | 35.0% | |
| CTTATCAGTAGATGGTTTAG+GGG | + | chr1.4:8527052-8527071 | MS.gene015987:intron | 35.0% | |
| CTTCCTAAGCTTTCTAATCT+CGG | - | chr1.4:8525478-8525497 | None:intergenic | 35.0% | |
| CTTCTCCTTGAACTTTATCA+AGG | - | chr1.4:8524942-8524961 | None:intergenic | 35.0% | |
| GAGTCTATCCAATATCCATT+GGG | + | chr1.4:8526490-8526509 | MS.gene015987:intron | 35.0% | |
| GATATCAACTATTCTCACCT+TGG | - | chr1.4:8525377-8525396 | None:intergenic | 35.0% | |
| GGATTTGTCTCATCTAATGT+GGG | - | chr1.4:8526589-8526608 | None:intergenic | 35.0% | |
| GTAATGTATGTGTTTATGCG+AGG | + | chr1.4:8525775-8525794 | MS.gene015987:intron | 35.0% | |
| TAAGGTTGAGGAAAAGATTC+AGG | + | chr1.4:8525315-8525334 | MS.gene015987:CDS | 35.0% | |
| TCAACAAATTCAGAGTCTGA+TGG | + | chr1.4:8527690-8527709 | MS.gene015987:CDS | 35.0% | |
| TCTACATTAGTATTGTCCAG+AGG | - | chr1.4:8527623-8527642 | None:intergenic | 35.0% | |
| TCTCCTTGAACTTTATCAAG+GGG | - | chr1.4:8524940-8524959 | None:intergenic | 35.0% | |
| TGCAAAATCAGTTGGAAGAA+GGG | - | chr1.4:8526022-8526041 | None:intergenic | 35.0% | |
| TGGATTTGTCTCATCTAATG+TGG | - | chr1.4:8526590-8526609 | None:intergenic | 35.0% | |
| TTATCAGTAGATGGTTTAGG+GGG | + | chr1.4:8527053-8527072 | MS.gene015987:intron | 35.0% | |
| TTCACAAGACATTCTTCACT+TGG | - | chr1.4:8528035-8528054 | None:intergenic | 35.0% | |
| ! | ACTTTTATAGGAGAGTCAAG+AGG | + | chr1.4:8525452-8525471 | MS.gene015987:intron | 35.0% |
| ! | GGTAATGACAGGGTATTTAT+GGG | - | chr1.4:8526097-8526116 | None:intergenic | 35.0% |
| ! | GGTTTTTAATAGGCTGTCTT+GGG | - | chr1.4:8524345-8524364 | None:intergenic | 35.0% |
| ! | TGGTAATGACAGGGTATTTA+TGG | - | chr1.4:8526098-8526117 | None:intergenic | 35.0% |
| !! | ATCAAAGGTTTGGTAATGAC+AGG | - | chr1.4:8526108-8526127 | None:intergenic | 35.0% |
| !! | ATTTGCTTTGTTCTAGGACA+AGG | + | chr1.4:8524135-8524154 | MS.gene015987:intron | 35.0% |
| !! | CTTACAAGCCGATTTTCTTA+GGG | + | chr1.4:8526430-8526449 | MS.gene015987:intron | 35.0% |
| !! | GATGGGTTGTGAATAGTTTA+GGG | - | chr1.4:8524529-8524548 | None:intergenic | 35.0% |
| !! | TCAAAGGTTTGGTAATGACA+GGG | - | chr1.4:8526107-8526126 | None:intergenic | 35.0% |
| !! | TCTTAAAAGTACCAACACTG+AGG | + | chr1.4:8525095-8525114 | MS.gene015987:intron | 35.0% |
| !! | TGATGGGTTGTGAATAGTTT+AGG | - | chr1.4:8524530-8524549 | None:intergenic | 35.0% |
| !!! | CAAGGTACTGTTTTCTTCAT+TGG | - | chr1.4:8527961-8527980 | None:intergenic | 35.0% |
| !!! | TCAGTGTTGGTACTTTTAAG+AGG | - | chr1.4:8525096-8525115 | None:intergenic | 35.0% |
| AAACAATCAGTGCAGACTCA+AGG | - | chr1.4:8525722-8525741 | None:intergenic | 40.0% | |
| AACAATCAGTGCAGACTCAA+GGG | - | chr1.4:8525721-8525740 | None:intergenic | 40.0% | |
| AACTGAGGGACTAACTTGAT+GGG | - | chr1.4:8524546-8524565 | None:intergenic | 40.0% | |
| AACTGGAAACTCGTCTATGA+AGG | + | chr1.4:8523994-8524013 | MS.gene015987:CDS | 40.0% | |
| ACACCACATCAAGAACTTTG+TGG | - | chr1.4:8527089-8527108 | None:intergenic | 40.0% | |
| ACAGAAACTGTTGTTCCAGA+TGG | + | chr1.4:8523935-8523954 | MS.gene015987:CDS | 40.0% | |
| AGCTGCTGAATTGGAAGAAT+TGG | - | chr1.4:8527859-8527878 | None:intergenic | 40.0% | |
| ATAGTCCTAACCTTACAAGC+TGG | + | chr1.4:8526632-8526651 | MS.gene015987:intron | 40.0% | |
| ATATAACGCGCAGCAATCAA+AGG | - | chr1.4:8526123-8526142 | None:intergenic | 40.0% | |
| CACCTTTGGTATCATTATCC+AGG | + | chr1.4:8525226-8525245 | MS.gene015987:intron | 40.0% | |
| CTAACCCTCTTATCAGTAGA+TGG | + | chr1.4:8527044-8527063 | MS.gene015987:intron | 40.0% | |
| CTAGCTTATCCAAAGCTACA+GGG | + | chr1.4:8527910-8527929 | MS.gene015987:CDS | 40.0% | |
| CTGGATAATGATACCAAAGG+TGG | - | chr1.4:8525228-8525247 | None:intergenic | 40.0% | |
| GCAAAATCAGTTGGAAGAAG+GGG | - | chr1.4:8526021-8526040 | None:intergenic | 40.0% | |
| GCAGTGCAACAAACAAAACT+TGG | - | chr1.4:8527252-8527271 | None:intergenic | 40.0% | |
| GGTAACAACAGAGTTTACCT+TGG | - | chr1.4:8524398-8524417 | None:intergenic | 40.0% | |
| TAACTGAGGGACTAACTTGA+TGG | - | chr1.4:8524547-8524566 | None:intergenic | 40.0% | |
| TAGCTTATCCAAAGCTACAG+GGG | + | chr1.4:8527911-8527930 | MS.gene015987:CDS | 40.0% | |
| TATCAGTAGATGGTTTAGGG+GGG | + | chr1.4:8527054-8527073 | MS.gene015987:intron | 40.0% | |
| TCACAAGGAAACTCCACTAA+AGG | + | chr1.4:8527765-8527784 | MS.gene015987:CDS | 40.0% | |
| TCAGCACATGCAAAATCAGT+TGG | - | chr1.4:8526030-8526049 | None:intergenic | 40.0% | |
| TCCATTGCCAACTTTCTATC+AGG | + | chr1.4:8525518-8525537 | MS.gene015987:CDS | 40.0% | |
| TCCTGATAGAAAGTTGGCAA+TGG | - | chr1.4:8525522-8525541 | None:intergenic | 40.0% | |
| TCGTCTATGAAGGAAATCGA+AGG | + | chr1.4:8524004-8524023 | MS.gene015987:CDS | 40.0% | |
| TCTTCACTTGGCTTATCTGA+AGG | - | chr1.4:8528023-8528042 | None:intergenic | 40.0% | |
| TCTTGTGAATGGTGACATAG+TGG | + | chr1.4:8528046-8528065 | MS.gene015987:CDS | 40.0% | |
| TGAGGAAAAGATTCAGGCAA+AGG | + | chr1.4:8525321-8525340 | MS.gene015987:CDS | 40.0% | |
| TGTTGCTCTACCTCATAATG+CGG | + | chr1.4:8527995-8528014 | MS.gene015987:CDS | 40.0% | |
| TTTGGTAAAAATGAGGGGAG+CGG | - | chr1.4:8527497-8527516 | None:intergenic | 40.0% | |
| ! | ACTAGCTTATCCAAAGCTAC+AGG | + | chr1.4:8527909-8527928 | MS.gene015987:CDS | 40.0% |
| ! | ATCAATCAGTTGGAAAGCAC+TGG | + | chr1.4:8523971-8523990 | MS.gene015987:CDS | 40.0% |
| ! | CGGTTTTTAATAGGCTGTCT+TGG | - | chr1.4:8524346-8524365 | None:intergenic | 40.0% |
| ! | GAACAGTCAAGAGCACAAAA+GGG | + | chr1.4:8524181-8524200 | MS.gene015987:CDS | 40.0% |
| ! | GGAGATTTTGCTCTTGTAGT+TGG | - | chr1.4:8527648-8527667 | None:intergenic | 40.0% |
| ! | GTACACTTTGTTTCCACCTT+TGG | + | chr1.4:8525212-8525231 | MS.gene015987:intron | 40.0% |
| ! | GTTTACCTCTCTCCTTTTCT+CGG | - | chr1.4:8525187-8525206 | None:intergenic | 40.0% |
| ! | TAGCTTGCAAGCAAAATCCA+AGG | + | chr1.4:8525357-8525376 | MS.gene015987:CDS | 40.0% |
| ! | TATGGATTCAGTTTCAGGTG+CGG | + | chr1.4:8525153-8525172 | MS.gene015987:CDS | 40.0% |
| ! | TCTTTTCCTCAACCTTAGTG+AGG | - | chr1.4:8525312-8525331 | None:intergenic | 40.0% |
| !! | CCTAAGAAAATCGGCTTGTA+AGG | - | chr1.4:8526432-8526451 | None:intergenic | 40.0% |
| !! | CCTTACAAGCCGATTTTCTT+AGG | + | chr1.4:8526429-8526448 | MS.gene015987:intron | 40.0% |
| AAAGATTCAGGCAAAGGAGG+AGG | + | chr1.4:8525327-8525346 | MS.gene015987:CDS | 45.0% | |
| AAGTATACACACGCAGTCAG+AGG | - | chr1.4:8525631-8525650 | None:intergenic | 45.0% | |
| AGAAGCAAGTCGAGTAGGAA+GGG | - | chr1.4:8527829-8527848 | None:intergenic | 45.0% | |
| AGAAGGGGAAGTGGAAAACA+AGG | - | chr1.4:8526006-8526025 | None:intergenic | 45.0% | |
| AGAGCAAAATCTCCCAAGCT+TGG | + | chr1.4:8527654-8527673 | MS.gene015987:CDS | 45.0% | |
| AGGATCAATGCCCAGATAAC+AGG | - | chr1.4:8527330-8527349 | None:intergenic | 45.0% | |
| AGGCCGAGATTAGAAAGCTT+AGG | + | chr1.4:8525472-8525491 | MS.gene015987:CDS | 45.0% | |
| ATATCCAGTCCTTGGCACAA+GGG | + | chr1.4:8526548-8526567 | MS.gene015987:intron | 45.0% | |
| CAAAATCTCCCAAGCTTGGT+CGG | + | chr1.4:8527658-8527677 | MS.gene015987:CDS | 45.0% | |
| CAAACTTGCATTAACACCGC+TGG | - | chr1.4:8524245-8524264 | None:intergenic | 45.0% | |
| CACGACGAACCTTCTAATTC+TGG | + | chr1.4:8523866-8523885 | MS.gene015987:CDS | 45.0% | |
| CCATCCTCTCCAGAATTAGA+AGG | - | chr1.4:8523878-8523897 | None:intergenic | 45.0% | |
| CGACCACAAAGTTCTTGATG+TGG | + | chr1.4:8527083-8527102 | MS.gene015987:intron | 45.0% | |
| CGACGTTGGAAAAGACAAAC+AGG | + | chr1.4:8524276-8524295 | MS.gene015987:CDS | 45.0% | |
| CTTTCAGAAGCAAGTCGAGT+AGG | - | chr1.4:8527834-8527853 | None:intergenic | 45.0% | |
| GCAAACCAGCTTGTAAGGTT+AGG | - | chr1.4:8526640-8526659 | None:intergenic | 45.0% | |
| GGAAAAGATTCAGGCAAAGG+AGG | + | chr1.4:8525324-8525343 | MS.gene015987:CDS | 45.0% | |
| GGACCCCTTGATAAAGTTCA+AGG | + | chr1.4:8524934-8524953 | MS.gene015987:CDS | 45.0% | |
| GTGACTTCTTGATTGCATGC+AGG | + | chr1.4:8525671-8525690 | MS.gene015987:intron | 45.0% | |
| GTGGGGACACTTCCAAATTA+TGG | + | chr1.4:8525135-8525154 | MS.gene015987:CDS | 45.0% | |
| GTTAATCCTTTGCCTGCTGA+TGG | + | chr1.4:8523815-8523834 | MS.gene015987:CDS | 45.0% | |
| TCAGCAGGCAAAGGATTAAC+TGG | - | chr1.4:8523815-8523834 | None:intergenic | 45.0% | |
| TCTGAAGGAACCGCATTATG+AGG | - | chr1.4:8528008-8528027 | None:intergenic | 45.0% | |
| TGCATTTGCTTGCTCAAGTG+TGG | + | chr1.4:8526142-8526161 | MS.gene015987:intron | 45.0% | |
| TGCTGTGTGAAAGTTCTTGG+TGG | + | chr1.4:8527517-8527536 | MS.gene015987:intron | 45.0% | |
| TTCTTTGTTGACCTGGATGC+AGG | - | chr1.4:8527885-8527904 | None:intergenic | 45.0% | |
| TTGGTGAAAAACAGCGACGT+TGG | + | chr1.4:8524262-8524281 | MS.gene015987:CDS | 45.0% | |
| TTGTGAGCAGTTCCTCACTA+AGG | + | chr1.4:8525297-8525316 | MS.gene015987:intron | 45.0% | |
| TTTCTCTTCCCCTGTAGCTT+TGG | - | chr1.4:8527922-8527941 | None:intergenic | 45.0% | |
| ! | CAGCGGTGTTAATGCAAGTT+TGG | + | chr1.4:8524243-8524262 | MS.gene015987:CDS | 45.0% |
| ! | CCTTCTAATTCTGGAGAGGA+TGG | + | chr1.4:8523875-8523894 | MS.gene015987:CDS | 45.0% |
| ! | CGAACCTTCTAATTCTGGAG+AGG | + | chr1.4:8523871-8523890 | MS.gene015987:CDS | 45.0% |
| ! | CTACTCGACTTGCTTCTGAA+AGG | + | chr1.4:8527832-8527851 | MS.gene015987:CDS | 45.0% |
| ! | GGAACAGTCAAGAGCACAAA+AGG | + | chr1.4:8524180-8524199 | MS.gene015987:CDS | 45.0% |
| ! | TGCTCTAGATATCCAGTCCT+TGG | + | chr1.4:8526540-8526559 | MS.gene015987:intron | 45.0% |
| !! | ACCTTACAAGCTGGTTTGCA+AGG | + | chr1.4:8526641-8526660 | MS.gene015987:intron | 45.0% |
| !! | AGAAGTGCCATTTGAGACAG+CGG | - | chr1.4:8524308-8524327 | None:intergenic | 45.0% |
| !! | CCTTACAAGCTGGTTTGCAA+GGG | + | chr1.4:8526642-8526661 | MS.gene015987:intron | 45.0% |
| !! | CTGAACGAGAAAGTGTCACA+AGG | + | chr1.4:8527750-8527769 | MS.gene015987:CDS | 45.0% |
| !! | CTTGATGGTGTCCACCAAAA+CGG | + | chr1.4:8523839-8523858 | MS.gene015987:CDS | 45.0% |
| !! | GAAAATCGGCTTGTAAGGTG+AGG | - | chr1.4:8526427-8526446 | None:intergenic | 45.0% |
| !! | GACAAGGGTATCTCCTTTAG+TGG | - | chr1.4:8527781-8527800 | None:intergenic | 45.0% |
| !! | CATAATTAAAAAAAAAAATT+AGG | - | chr1.4:8526868-8526887 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTAATTATGATT+TGG | + | chr1.4:8526871-8526890 | MS.gene015987:intron | 5.0% |
| ACACCATCAAGTCCATCAGC+AGG | - | chr1.4:8523830-8523849 | None:intergenic | 50.0% | |
| ACATCAGAAGACGCTGCTTC+AGG | - | chr1.4:8524779-8524798 | None:intergenic | 50.0% | |
| ACCTTCTTCAGCTCCACCTT+AGG | - | chr1.4:8525555-8525574 | None:intergenic | 50.0% | |
| ACGCGCAGCAATCAAAGGTT+TGG | - | chr1.4:8526118-8526137 | None:intergenic | 50.0% | |
| AGGTTTGGCATCCTCAGTGT+TGG | - | chr1.4:8525109-8525128 | None:intergenic | 50.0% | |
| AGTCTTCTTCCGACCAAGCT+TGG | - | chr1.4:8527670-8527689 | None:intergenic | 50.0% | |
| CAGAAGCAAGTCGAGTAGGA+AGG | - | chr1.4:8527830-8527849 | None:intergenic | 50.0% | |
| CCCTTGCAAACCAGCTTGTA+AGG | - | chr1.4:8526645-8526664 | None:intergenic | 50.0% | |
| CCTGCCGATCATTGAATGAG+CGG | - | chr1.4:8524366-8524385 | None:intergenic | 50.0% | |
| CGAAGGATCGAATGACAACG+TGG | + | chr1.4:8524021-8524040 | MS.gene015987:CDS | 50.0% | |
| CGTGCTTGCACACGTATATC+TGG | + | chr1.4:8525598-8525617 | MS.gene015987:intron | 50.0% | |
| GATATCCAGTCCTTGGCACA+AGG | + | chr1.4:8526547-8526566 | MS.gene015987:intron | 50.0% | |
| GCAGGCTCCTGATAGAAAGT+TGG | - | chr1.4:8525528-8525547 | None:intergenic | 50.0% | |
| GCAGTTCCTCACTAAGGTTG+AGG | + | chr1.4:8525303-8525322 | MS.gene015987:intron | 50.0% | |
| GCATCATCCGCTGTCTCAAA+TGG | + | chr1.4:8524298-8524317 | MS.gene015987:CDS | 50.0% | |
| GTAGGAAGGGACTTTCGTAG+TGG | - | chr1.4:8527816-8527835 | None:intergenic | 50.0% | |
| GTCTTCTTCCGACCAAGCTT+GGG | - | chr1.4:8527669-8527688 | None:intergenic | 50.0% | |
| TCAAGTCCATCAGCAGGCAA+AGG | - | chr1.4:8523824-8523843 | None:intergenic | 50.0% | |
| TCAGTTGGAAGAAGGGGAAG+TGG | - | chr1.4:8526015-8526034 | None:intergenic | 50.0% | |
| TCCTAAGGTGGAGCTGAAGA+AGG | + | chr1.4:8525551-8525570 | MS.gene015987:CDS | 50.0% | |
| TCTTGTGACAACACGAGCTG+AGG | - | chr1.4:8528083-8528102 | None:intergenic | 50.0% | |
| TGTGCTCTTGACTGTTCCGT+TGG | - | chr1.4:8524178-8524197 | None:intergenic | 50.0% | |
| TTCTTCAGCTCCACCTTAGG+AGG | - | chr1.4:8525552-8525571 | None:intergenic | 50.0% | |
| ! | CAGGCAATTATAGGAGCACG+CGG | - | chr1.4:8525878-8525897 | None:intergenic | 50.0% |
| ! | CTGGTTTGCAAGGGTTGAGT+AGG | + | chr1.4:8526651-8526670 | MS.gene015987:intron | 50.0% |
| ! | GTTCGTCGTGAACACCGTTT+TGG | - | chr1.4:8523856-8523875 | None:intergenic | 50.0% |
| ! | TATCTAGAGCATGACCCGAG+TGG | - | chr1.4:8526531-8526550 | None:intergenic | 50.0% |
| !! | AAGGTTGGTGGTAGTTCCAG+CGG | + | chr1.4:8524226-8524245 | MS.gene015987:CDS | 50.0% |
| !! | CAGTTGGAAAGCACTGGAAC+TGG | + | chr1.4:8523977-8523996 | MS.gene015987:CDS | 50.0% |
| !! | TCAGGCTTTGAAGGTTGCTG+AGG | - | chr1.4:8524761-8524780 | None:intergenic | 50.0% |
| !! | TTGCCTGCTGATGGACTTGA+TGG | + | chr1.4:8523824-8523843 | MS.gene015987:CDS | 50.0% |
| AATGCACCTCCCTTGTGCCA+AGG | - | chr1.4:8526560-8526579 | None:intergenic | 55.0% | |
| ACGAGCCGAGAAAAGGAGAG+AGG | + | chr1.4:8525179-8525198 | MS.gene015987:CDS | 55.0% | |
| ATGCCAAACCTCGCAGAGTG+GGG | + | chr1.4:8525118-8525137 | MS.gene015987:CDS | 55.0% | |
| CCGCTCATTCAATGATCGGC+AGG | + | chr1.4:8524363-8524382 | MS.gene015987:CDS | 55.0% | |
| GATGCCAAACCTCGCAGAGT+GGG | + | chr1.4:8525117-8525136 | MS.gene015987:CDS | 55.0% | |
| GCGGGAGACCCAATGGATAT+TGG | - | chr1.4:8526501-8526520 | None:intergenic | 55.0% | |
| GGTAAAAATGAGGGGAGCGG+AGG | - | chr1.4:8527494-8527513 | None:intergenic | 55.0% | |
| GGTAGCTGCAGTTCTCGACA+AGG | + | chr1.4:8527717-8527736 | MS.gene015987:CDS | 55.0% | |
| TCCATTGGGTCTCCCGCTAT+CGG | + | chr1.4:8526504-8526523 | MS.gene015987:intron | 55.0% | |
| TGCAAGCACGCACACACAGA+GGG | - | chr1.4:8525588-8525607 | None:intergenic | 55.0% | |
| TGCAGGTGCAGCTGCTGAAT+TGG | - | chr1.4:8527868-8527887 | None:intergenic | 55.0% | |
| ! | CGTCGTGAACACCGTTTTGG+TGG | - | chr1.4:8523853-8523872 | None:intergenic | 55.0% |
| ! | GACGCTGCTTCAGGCTTTGA+AGG | - | chr1.4:8524770-8524789 | None:intergenic | 55.0% |
| ACCTCCCTTGTGCCAAGGAC+TGG | - | chr1.4:8526555-8526574 | None:intergenic | 60.0% | |
| AGCTCCACCTTAGGAGGAGC+AGG | - | chr1.4:8525546-8525565 | None:intergenic | 60.0% | |
| CCATTGGGTCTCCCGCTATC+GGG | + | chr1.4:8526505-8526524 | MS.gene015987:intron | 60.0% | |
| GCGGTGAACGAGCCGAGAAA+AGG | + | chr1.4:8525172-8525191 | MS.gene015987:CDS | 60.0% | |
| GGATGCCAAACCTCGCAGAG+TGG | + | chr1.4:8525116-8525135 | MS.gene015987:CDS | 60.0% | |
| GTGCAAGCACGCACACACAG+AGG | - | chr1.4:8525589-8525608 | None:intergenic | 60.0% | |
| TCAGGAGCCTGCTCCTCCTA+AGG | + | chr1.4:8525536-8525555 | MS.gene015987:CDS | 60.0% | |
| TCCAGTCCTTGGCACAAGGG+AGG | + | chr1.4:8526551-8526570 | MS.gene015987:intron | 60.0% | |
| TCGGCAGGCTCAACTGTCCA+AGG | + | chr1.4:8524378-8524397 | MS.gene015987:CDS | 60.0% | |
| TGTCCCCACTCTGCGAGGTT+TGG | - | chr1.4:8525124-8525143 | None:intergenic | 60.0% | |
| CAGCAGCTGCACCTGCATCC+AGG | + | chr1.4:8527871-8527890 | MS.gene015987:CDS | 65.0% | |
| GGAGCCTGCTCCTCCTAAGG+TGG | + | chr1.4:8525539-8525558 | MS.gene015987:CDS | 65.0% | |
| TCTCCCGCTATCGGGCCACT+CGG | + | chr1.4:8526513-8526532 | MS.gene015987:intron | 65.0% | |
| TGACCCGAGTGGCCCGATAG+CGG | - | chr1.4:8526520-8526539 | None:intergenic | 65.0% | |
| !! | CCCGATAGCGGGAGACCCAA+TGG | - | chr1.4:8526508-8526527 | None:intergenic | 65.0% |
| !! | GGAAGTGTCCCCACTCTGCG+AGG | - | chr1.4:8525129-8525148 | None:intergenic | 65.0% |
| CTCCCGCTATCGGGCCACTC+GGG | + | chr1.4:8526514-8526533 | MS.gene015987:intron | 70.0% | |
| GACCCGAGTGGCCCGATAGC+GGG | - | chr1.4:8526519-8526538 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 8523803 | 8528124 | 8523803 | ID=MS.gene015987 |
| chr1.4 | mRNA | 8523803 | 8528124 | 8523803 | ID=MS.gene015987.t1;Parent=MS.gene015987 |
| chr1.4 | exon | 8523803 | 8524069 | 8523803 | ID=MS.gene015987.t1.exon1;Parent=MS.gene015987.t1 |
| chr1.4 | CDS | 8523803 | 8524069 | 8523803 | ID=cds.MS.gene015987.t1;Parent=MS.gene015987.t1 |
| chr1.4 | exon | 8524151 | 8524399 | 8524151 | ID=MS.gene015987.t1.exon2;Parent=MS.gene015987.t1 |
| chr1.4 | CDS | 8524151 | 8524399 | 8524151 | ID=cds.MS.gene015987.t1;Parent=MS.gene015987.t1 |
| chr1.4 | exon | 8524764 | 8524804 | 8524764 | ID=MS.gene015987.t1.exon3;Parent=MS.gene015987.t1 |
| chr1.4 | CDS | 8524764 | 8524804 | 8524764 | ID=cds.MS.gene015987.t1;Parent=MS.gene015987.t1 |
| chr1.4 | exon | 8524903 | 8524974 | 8524903 | ID=MS.gene015987.t1.exon4;Parent=MS.gene015987.t1 |
| chr1.4 | CDS | 8524903 | 8524974 | 8524903 | ID=cds.MS.gene015987.t1;Parent=MS.gene015987.t1 |
| chr1.4 | exon | 8525104 | 8525200 | 8525104 | ID=MS.gene015987.t1.exon5;Parent=MS.gene015987.t1 |
| chr1.4 | CDS | 8525104 | 8525200 | 8525104 | ID=cds.MS.gene015987.t1;Parent=MS.gene015987.t1 |
| chr1.4 | exon | 8525307 | 8525378 | 8525307 | ID=MS.gene015987.t1.exon6;Parent=MS.gene015987.t1 |
| chr1.4 | CDS | 8525307 | 8525378 | 8525307 | ID=cds.MS.gene015987.t1;Parent=MS.gene015987.t1 |
| chr1.4 | exon | 8525462 | 8525572 | 8525462 | ID=MS.gene015987.t1.exon7;Parent=MS.gene015987.t1 |
| chr1.4 | CDS | 8525462 | 8525572 | 8525462 | ID=cds.MS.gene015987.t1;Parent=MS.gene015987.t1 |
| chr1.4 | exon | 8527642 | 8528124 | 8527642 | ID=MS.gene015987.t1.exon8;Parent=MS.gene015987.t1 |
| chr1.4 | CDS | 8527642 | 8528124 | 8527642 | ID=cds.MS.gene015987.t1;Parent=MS.gene015987.t1 |
| Gene Sequence |
| Protein sequence |
