Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072795.t1 | XP_003611105.2 | 97.2 | 1000 | 24 | 1 | 1 | 1000 | 1 | 996 | 0.00E+00 | 1819.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072795.t1 | Q9SH30 | 74.2 | 995 | 244 | 6 | 3 | 989 | 4 | 993 | 0.0e+00 | 1365.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072795.t1 | G7KDC8 | 97.2 | 1000 | 24 | 1 | 1 | 1000 | 1 | 996 | 0.0e+00 | 1819.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene072795 | -0.809519 | 1.82E-50 | -1.69E-46 |
| MS.gene049222 | MS.gene072795 | -0.801577 | 8.43E-49 | -1.69E-46 |
| MS.gene049281 | MS.gene072795 | 0.845361 | 4.26E-59 | -1.69E-46 |
| MS.gene049320 | MS.gene072795 | -0.81243 | 4.26E-51 | -1.69E-46 |
| MS.gene05010 | MS.gene072795 | -0.80204 | 6.77E-49 | -1.69E-46 |
| MS.gene050163 | MS.gene072795 | -0.803706 | 3.07E-49 | -1.69E-46 |
| MS.gene050165 | MS.gene072795 | -0.806828 | 6.81E-50 | -1.69E-46 |
| MS.gene050170 | MS.gene072795 | -0.844703 | 6.42E-59 | -1.69E-46 |
| MS.gene050496 | MS.gene072795 | -0.830181 | 3.39E-55 | -1.69E-46 |
| MS.gene050504 | MS.gene072795 | -0.837461 | 5.13E-57 | -1.69E-46 |
| MS.gene050518 | MS.gene072795 | -0.811738 | 6.02E-51 | -1.69E-46 |
| MS.gene050577 | MS.gene072795 | -0.843883 | 1.07E-58 | -1.69E-46 |
| MS.gene050612 | MS.gene072795 | -0.818111 | 2.32E-52 | -1.69E-46 |
| MS.gene050675 | MS.gene072795 | -0.819426 | 1.17E-52 | -1.69E-46 |
| MS.gene050699 | MS.gene072795 | -0.838678 | 2.49E-57 | -1.69E-46 |
| MS.gene050904 | MS.gene072795 | -0.81031 | 1.23E-50 | -1.69E-46 |
| MS.gene050986 | MS.gene072795 | -0.807816 | 4.20E-50 | -1.69E-46 |
| MS.gene051364 | MS.gene072795 | 0.826369 | 2.82E-54 | -1.69E-46 |
| MS.gene051366 | MS.gene072795 | 0.811667 | 6.24E-51 | -1.69E-46 |
| MS.gene051367 | MS.gene072795 | 0.807253 | 5.53E-50 | -1.69E-46 |
| MS.gene051973 | MS.gene072795 | 0.809414 | 1.91E-50 | -1.69E-46 |
| MS.gene052015 | MS.gene072795 | 0.816772 | 4.66E-52 | -1.69E-46 |
| MS.gene052164 | MS.gene072795 | -0.802257 | 6.11E-49 | -1.69E-46 |
| MS.gene052482 | MS.gene072795 | -0.814709 | 1.34E-51 | -1.69E-46 |
| MS.gene052486 | MS.gene072795 | -0.830936 | 2.22E-55 | -1.69E-46 |
| MS.gene052494 | MS.gene072795 | 0.802152 | 6.42E-49 | -1.69E-46 |
| MS.gene052503 | MS.gene072795 | -0.804418 | 2.18E-49 | -1.69E-46 |
| MS.gene052823 | MS.gene072795 | -0.807568 | 4.74E-50 | -1.69E-46 |
| MS.gene052825 | MS.gene072795 | -0.807607 | 4.65E-50 | -1.69E-46 |
| MS.gene053097 | MS.gene072795 | 0.808242 | 3.41E-50 | -1.69E-46 |
| MS.gene053203 | MS.gene072795 | -0.810146 | 1.33E-50 | -1.69E-46 |
| MS.gene053213 | MS.gene072795 | -0.802688 | 4.98E-49 | -1.69E-46 |
| MS.gene053286 | MS.gene072795 | -0.802322 | 5.93E-49 | -1.69E-46 |
| MS.gene053420 | MS.gene072795 | 0.801584 | 8.41E-49 | -1.69E-46 |
| MS.gene053549 | MS.gene072795 | 0.815065 | 1.12E-51 | -1.69E-46 |
| MS.gene05470 | MS.gene072795 | -0.863285 | 2.78E-64 | -1.69E-46 |
| MS.gene054954 | MS.gene072795 | -0.817331 | 3.49E-52 | -1.69E-46 |
| MS.gene055362 | MS.gene072795 | -0.829043 | 6.42E-55 | -1.69E-46 |
| MS.gene055502 | MS.gene072795 | -0.816217 | 6.20E-52 | -1.69E-46 |
| MS.gene055577 | MS.gene072795 | -0.832154 | 1.11E-55 | -1.69E-46 |
| MS.gene05589 | MS.gene072795 | -0.831666 | 1.47E-55 | -1.69E-46 |
| MS.gene056504 | MS.gene072795 | -0.837335 | 5.52E-57 | -1.69E-46 |
| MS.gene056550 | MS.gene072795 | 0.821618 | 3.67E-53 | -1.69E-46 |
| MS.gene056610 | MS.gene072795 | -0.813375 | 2.64E-51 | -1.69E-46 |
| MS.gene056692 | MS.gene072795 | -0.842461 | 2.55E-58 | -1.69E-46 |
| MS.gene056988 | MS.gene072795 | 0.808674 | 2.76E-50 | -1.69E-46 |
| MS.gene057831 | MS.gene072795 | -0.82826 | 9.92E-55 | -1.69E-46 |
| MS.gene057986 | MS.gene072795 | -0.803101 | 4.09E-49 | -1.69E-46 |
| MS.gene058334 | MS.gene072795 | 0.839676 | 1.37E-57 | -1.69E-46 |
| MS.gene05837 | MS.gene072795 | -0.812728 | 3.66E-51 | -1.69E-46 |
| MS.gene058419 | MS.gene072795 | -0.816428 | 5.56E-52 | -1.69E-46 |
| MS.gene058544 | MS.gene072795 | -0.822748 | 2.01E-53 | -1.69E-46 |
| MS.gene058838 | MS.gene072795 | -0.802523 | 5.39E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene072795 | -0.836001 | 1.21E-56 | -1.69E-46 |
| MS.gene059023 | MS.gene072795 | -0.830238 | 3.29E-55 | -1.69E-46 |
| MS.gene059103 | MS.gene072795 | 0.828155 | 1.05E-54 | -1.69E-46 |
| MS.gene059480 | MS.gene072795 | 0.830392 | 3.01E-55 | -1.69E-46 |
| MS.gene059677 | MS.gene072795 | -0.843834 | 1.10E-58 | -1.69E-46 |
| MS.gene059718 | MS.gene072795 | -0.809164 | 2.17E-50 | -1.69E-46 |
| MS.gene059756 | MS.gene072795 | -0.815974 | 7.02E-52 | -1.69E-46 |
| MS.gene059801 | MS.gene072795 | -0.801177 | 1.02E-48 | -1.69E-46 |
| MS.gene059837 | MS.gene072795 | -0.838319 | 3.09E-57 | -1.69E-46 |
| MS.gene059865 | MS.gene072795 | -0.800531 | 1.38E-48 | -1.69E-46 |
| MS.gene06000 | MS.gene072795 | -0.81626 | 6.06E-52 | -1.69E-46 |
| MS.gene060187 | MS.gene072795 | 0.801253 | 9.82E-49 | -1.69E-46 |
| MS.gene060593 | MS.gene072795 | 0.800314 | 1.53E-48 | -1.69E-46 |
| MS.gene060595 | MS.gene072795 | 0.851136 | 1.08E-60 | -1.69E-46 |
| MS.gene060703 | MS.gene072795 | -0.804419 | 2.18E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene072795 | -0.825114 | 5.59E-54 | -1.69E-46 |
| MS.gene060778 | MS.gene072795 | -0.800297 | 1.54E-48 | -1.69E-46 |
| MS.gene06077 | MS.gene072795 | -0.863974 | 1.70E-64 | -1.69E-46 |
| MS.gene060982 | MS.gene072795 | -0.83004 | 3.67E-55 | -1.69E-46 |
| MS.gene061044 | MS.gene072795 | 0.814764 | 1.30E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene072795 | MS.gene32757 | PPI |
| MS.gene072795 | MS.gene42637 | PPI |
| MS.gene072795 | MS.gene90280 | PPI |
| MS.gene072795 | MS.gene42675 | PPI |
| MS.gene072795 | MS.gene014966 | PPI |
| MS.gene072795 | MS.gene90176 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072795.t1 | MTR_5g010420 | 97.200 | 1000 | 24 | 1 | 1 | 1000 | 1 | 996 | 0.0 | 1983 |
| MS.gene072795.t1 | MTR_8g079250 | 70.922 | 987 | 272 | 8 | 12 | 989 | 14 | 994 | 0.0 | 1421 |
| MS.gene072795.t1 | MTR_8g079250 | 68.905 | 849 | 249 | 8 | 12 | 851 | 14 | 856 | 0.0 | 1184 |
| MS.gene072795.t1 | MTR_8g012390 | 56.429 | 941 | 399 | 6 | 47 | 981 | 22 | 957 | 0.0 | 1034 |
| MS.gene072795.t1 | MTR_8g079250 | 68.035 | 682 | 205 | 7 | 12 | 686 | 14 | 689 | 0.0 | 952 |
| MS.gene072795.t1 | MTR_2g035840 | 50.107 | 938 | 444 | 9 | 56 | 976 | 51 | 981 | 0.0 | 869 |
| MS.gene072795.t1 | MTR_2g035840 | 32.432 | 148 | 94 | 1 | 124 | 265 | 41 | 188 | 5.24e-16 | 83.6 |
| MS.gene072795.t1 | MTR_2g035840 | 25.532 | 188 | 124 | 3 | 38 | 225 | 116 | 287 | 7.09e-12 | 70.1 |
| MS.gene072795.t1 | MTR_4g094695 | 49.001 | 951 | 456 | 9 | 56 | 983 | 45 | 989 | 0.0 | 855 |
| MS.gene072795.t1 | MTR_4g094695 | 28.188 | 149 | 102 | 2 | 38 | 186 | 112 | 255 | 2.68e-12 | 71.6 |
| MS.gene072795.t1 | MTR_4g094695 | 31.373 | 153 | 89 | 4 | 120 | 257 | 32 | 183 | 2.69e-11 | 68.6 |
| MS.gene072795.t1 | MTR_8g012390 | 52.774 | 811 | 372 | 6 | 47 | 851 | 22 | 827 | 0.0 | 839 |
| MS.gene072795.t1 | MTR_4g094232 | 39.470 | 641 | 349 | 8 | 351 | 971 | 287 | 908 | 1.95e-129 | 415 |
| MS.gene072795.t1 | MTR_3g105190 | 35.659 | 645 | 375 | 11 | 361 | 975 | 251 | 885 | 7.13e-111 | 364 |
| MS.gene072795.t1 | MTR_3g105190 | 33.144 | 528 | 315 | 10 | 361 | 860 | 251 | 768 | 6.19e-75 | 263 |
| MS.gene072795.t1 | MTR_2g036380 | 30.164 | 610 | 365 | 15 | 403 | 996 | 66 | 630 | 1.12e-71 | 253 |
| MS.gene072795.t1 | MTR_2g036380 | 30.164 | 610 | 365 | 15 | 403 | 996 | 156 | 720 | 4.20e-71 | 253 |
| MS.gene072795.t1 | MTR_4g127580 | 32.008 | 528 | 327 | 11 | 401 | 924 | 160 | 659 | 2.09e-70 | 254 |
| MS.gene072795.t1 | MTR_2g036380 | 30.574 | 592 | 350 | 15 | 421 | 996 | 22 | 568 | 2.50e-70 | 248 |
| MS.gene072795.t1 | MTR_2g036380 | 30.412 | 582 | 344 | 15 | 431 | 996 | 1 | 537 | 2.03e-69 | 244 |
| MS.gene072795.t1 | MTR_4g094985 | 28.892 | 623 | 379 | 20 | 366 | 950 | 162 | 758 | 1.53e-46 | 180 |
| MS.gene072795.t1 | MTR_6g011310 | 23.784 | 555 | 340 | 17 | 458 | 950 | 146 | 679 | 3.73e-22 | 103 |
| MS.gene072795.t1 | MTR_1g009760 | 23.679 | 549 | 324 | 15 | 458 | 939 | 147 | 667 | 1.61e-21 | 101 |
| MS.gene072795.t1 | MTR_8g006790 | 22.540 | 559 | 341 | 16 | 458 | 950 | 152 | 684 | 3.11e-21 | 100 |
| MS.gene072795.t1 | MTR_1g009760 | 23.679 | 549 | 324 | 15 | 458 | 939 | 144 | 664 | 4.04e-21 | 100 |
| MS.gene072795.t1 | MTR_5g015590 | 34.659 | 176 | 86 | 4 | 785 | 931 | 650 | 825 | 7.63e-21 | 99.4 |
| MS.gene072795.t1 | MTR_7g117500 | 22.792 | 566 | 333 | 18 | 457 | 950 | 150 | 683 | 8.97e-21 | 99.0 |
| MS.gene072795.t1 | MTR_5g015590 | 34.659 | 176 | 86 | 4 | 785 | 931 | 650 | 825 | 9.46e-21 | 99.0 |
| MS.gene072795.t1 | MTR_5g015590 | 34.659 | 176 | 86 | 4 | 785 | 931 | 650 | 825 | 9.97e-21 | 99.0 |
| MS.gene072795.t1 | MTR_4g127710 | 22.878 | 542 | 337 | 13 | 458 | 939 | 147 | 667 | 3.80e-20 | 97.1 |
| MS.gene072795.t1 | MTR_4g127710 | 22.878 | 542 | 337 | 13 | 458 | 939 | 147 | 667 | 4.81e-20 | 96.7 |
| MS.gene072795.t1 | MTR_3g108800 | 22.587 | 549 | 330 | 15 | 458 | 939 | 143 | 663 | 7.02e-20 | 96.3 |
| MS.gene072795.t1 | MTR_3g103070 | 33.152 | 184 | 94 | 4 | 777 | 931 | 468 | 651 | 9.92e-20 | 95.5 |
| MS.gene072795.t1 | MTR_3g108800 | 22.587 | 549 | 330 | 15 | 458 | 939 | 144 | 664 | 1.05e-19 | 95.5 |
| MS.gene072795.t1 | MTR_3g103070 | 33.152 | 184 | 94 | 4 | 777 | 931 | 644 | 827 | 1.06e-19 | 95.9 |
| MS.gene072795.t1 | MTR_4g096990 | 34.091 | 176 | 87 | 4 | 785 | 931 | 648 | 823 | 2.71e-19 | 94.4 |
| MS.gene072795.t1 | MTR_2g104860 | 22.569 | 545 | 330 | 16 | 458 | 931 | 142 | 665 | 3.03e-19 | 94.4 |
| MS.gene072795.t1 | MTR_7g117500 | 22.703 | 555 | 336 | 19 | 457 | 950 | 150 | 672 | 9.54e-19 | 92.4 |
| MS.gene072795.t1 | MTR_8g090125 | 33.333 | 177 | 89 | 4 | 786 | 933 | 606 | 782 | 4.29e-17 | 87.0 |
| MS.gene072795.t1 | MTR_7g100110 | 32.911 | 158 | 74 | 3 | 785 | 910 | 639 | 796 | 5.64e-17 | 87.0 |
| MS.gene072795.t1 | MTR_8g013780 | 31.953 | 169 | 82 | 4 | 775 | 910 | 184 | 352 | 1.42e-16 | 84.7 |
| MS.gene072795.t1 | MTR_2g038310 | 29.282 | 181 | 95 | 2 | 786 | 933 | 699 | 879 | 5.63e-16 | 83.6 |
| MS.gene072795.t1 | MTR_2g038310 | 29.282 | 181 | 95 | 2 | 786 | 933 | 699 | 879 | 6.15e-16 | 83.6 |
| MS.gene072795.t1 | MTR_4g043690 | 32.184 | 174 | 90 | 3 | 786 | 931 | 656 | 829 | 6.80e-16 | 83.2 |
| MS.gene072795.t1 | MTR_0005s0140 | 32.184 | 174 | 90 | 3 | 786 | 931 | 571 | 744 | 7.13e-16 | 83.2 |
| MS.gene072795.t1 | MTR_6g016470 | 31.646 | 158 | 76 | 3 | 785 | 910 | 643 | 800 | 7.52e-16 | 83.2 |
| MS.gene072795.t1 | MTR_7g095710 | 31.250 | 160 | 76 | 2 | 785 | 910 | 674 | 833 | 1.02e-15 | 82.8 |
| MS.gene072795.t1 | MTR_6g011310 | 28.856 | 201 | 108 | 4 | 782 | 950 | 477 | 674 | 1.14e-15 | 82.4 |
| MS.gene072795.t1 | MTR_8g027160 | 31.875 | 160 | 75 | 2 | 785 | 910 | 621 | 780 | 1.17e-15 | 82.4 |
| MS.gene072795.t1 | MTR_8g027160 | 31.875 | 160 | 75 | 2 | 785 | 910 | 621 | 780 | 1.36e-15 | 82.4 |
| MS.gene072795.t1 | MTR_4g008170 | 30.387 | 181 | 93 | 3 | 786 | 933 | 719 | 899 | 1.50e-15 | 82.4 |
| MS.gene072795.t1 | MTR_5g015590 | 38.346 | 133 | 53 | 4 | 785 | 888 | 650 | 782 | 1.59e-15 | 82.0 |
| MS.gene072795.t1 | MTR_4g008170 | 30.387 | 181 | 93 | 3 | 786 | 933 | 712 | 892 | 2.04e-15 | 82.0 |
| MS.gene072795.t1 | MTR_2g105830 | 31.169 | 154 | 73 | 3 | 786 | 906 | 702 | 855 | 5.88e-15 | 80.1 |
| MS.gene072795.t1 | MTR_4g107500 | 28.283 | 198 | 107 | 4 | 785 | 950 | 487 | 681 | 1.13e-14 | 79.3 |
| MS.gene072795.t1 | MTR_2g036650 | 28.723 | 188 | 101 | 3 | 782 | 939 | 486 | 670 | 1.47e-14 | 79.0 |
| MS.gene072795.t1 | MTR_4g008650 | 31.429 | 175 | 91 | 4 | 786 | 931 | 648 | 822 | 1.77e-14 | 78.6 |
| MS.gene072795.t1 | MTR_4g008650 | 31.429 | 175 | 91 | 4 | 786 | 931 | 648 | 822 | 2.06e-14 | 78.6 |
| MS.gene072795.t1 | MTR_3g103270 | 30.573 | 157 | 78 | 1 | 785 | 910 | 616 | 772 | 4.43e-14 | 77.4 |
| MS.gene072795.t1 | MTR_4g116950 | 28.205 | 195 | 100 | 4 | 782 | 946 | 481 | 665 | 7.40e-14 | 76.6 |
| MS.gene072795.t1 | MTR_1g009720 | 28.205 | 195 | 100 | 4 | 782 | 946 | 480 | 664 | 8.94e-14 | 76.3 |
| MS.gene072795.t1 | MTR_8g063880 | 28.205 | 195 | 100 | 4 | 782 | 946 | 480 | 664 | 9.89e-14 | 76.3 |
| MS.gene072795.t1 | MTR_2g449840 | 28.824 | 170 | 91 | 2 | 785 | 924 | 484 | 653 | 3.55e-13 | 74.3 |
| MS.gene072795.t1 | MTR_8g089870 | 30.323 | 155 | 82 | 2 | 785 | 913 | 520 | 674 | 8.40e-13 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072795.t1 | AT1G63440 | 74.018 | 993 | 249 | 5 | 3 | 989 | 4 | 993 | 0.0 | 1496 |
| MS.gene072795.t1 | AT5G44790 | 50.742 | 944 | 442 | 9 | 56 | 983 | 62 | 998 | 0.0 | 894 |
| MS.gene072795.t1 | AT5G44790 | 34.028 | 144 | 91 | 2 | 120 | 262 | 51 | 191 | 8.92e-15 | 79.7 |
| MS.gene072795.t1 | AT5G44790 | 29.630 | 162 | 107 | 3 | 48 | 206 | 131 | 288 | 1.31e-14 | 79.3 |
| MS.gene072795.t1 | AT4G33520 | 35.226 | 863 | 439 | 24 | 132 | 971 | 152 | 917 | 6.12e-116 | 379 |
| MS.gene072795.t1 | AT5G21930 | 34.558 | 735 | 423 | 16 | 287 | 981 | 167 | 883 | 4.93e-115 | 375 |
| MS.gene072795.t1 | AT5G21930 | 34.558 | 735 | 423 | 16 | 287 | 981 | 167 | 883 | 4.93e-115 | 375 |
| MS.gene072795.t1 | AT4G33520 | 35.110 | 863 | 440 | 24 | 132 | 971 | 152 | 917 | 1.20e-114 | 376 |
| MS.gene072795.t1 | AT5G21930 | 33.061 | 735 | 411 | 17 | 287 | 981 | 167 | 860 | 1.66e-102 | 341 |
| MS.gene072795.t1 | AT5G21930 | 33.841 | 656 | 376 | 17 | 287 | 902 | 167 | 804 | 1.02e-91 | 311 |
| MS.gene072795.t1 | AT4G30110 | 32.707 | 532 | 323 | 12 | 399 | 924 | 153 | 655 | 1.02e-75 | 268 |
| MS.gene072795.t1 | AT4G30110 | 32.707 | 532 | 323 | 12 | 399 | 924 | 153 | 655 | 1.02e-75 | 268 |
| MS.gene072795.t1 | AT2G19110 | 31.492 | 543 | 330 | 14 | 401 | 938 | 166 | 671 | 4.50e-69 | 251 |
| MS.gene072795.t1 | AT2G19110 | 31.492 | 543 | 330 | 14 | 401 | 938 | 166 | 671 | 4.50e-69 | 251 |
| MS.gene072795.t1 | AT2G19110 | 31.492 | 543 | 330 | 14 | 401 | 938 | 166 | 671 | 4.50e-69 | 251 |
| MS.gene072795.t1 | AT4G30120 | 30.836 | 347 | 212 | 6 | 403 | 746 | 4 | 325 | 4.90e-45 | 167 |
| MS.gene072795.t1 | AT4G37270 | 28.523 | 596 | 370 | 18 | 366 | 924 | 169 | 745 | 1.22e-43 | 171 |
| MS.gene072795.t1 | AT4G30120 | 30.836 | 347 | 212 | 6 | 403 | 746 | 163 | 484 | 1.84e-43 | 167 |
| MS.gene072795.t1 | AT2G41560 | 24.912 | 570 | 321 | 14 | 468 | 933 | 153 | 719 | 7.76e-28 | 122 |
| MS.gene072795.t1 | AT2G41560 | 24.912 | 570 | 321 | 14 | 468 | 933 | 153 | 719 | 7.76e-28 | 122 |
| MS.gene072795.t1 | AT2G41560 | 24.912 | 570 | 321 | 14 | 468 | 933 | 153 | 719 | 7.76e-28 | 122 |
| MS.gene072795.t1 | AT2G41560 | 24.912 | 570 | 321 | 14 | 468 | 933 | 255 | 821 | 7.77e-28 | 122 |
| MS.gene072795.t1 | AT1G17260 | 23.327 | 553 | 317 | 15 | 457 | 931 | 149 | 672 | 3.61e-23 | 107 |
| MS.gene072795.t1 | AT5G62670 | 23.784 | 555 | 340 | 17 | 458 | 950 | 146 | 679 | 3.12e-22 | 103 |
| MS.gene072795.t1 | AT3G60330 | 22.887 | 568 | 341 | 18 | 448 | 950 | 140 | 675 | 1.71e-21 | 101 |
| MS.gene072795.t1 | AT3G60330 | 22.887 | 568 | 341 | 18 | 448 | 950 | 140 | 675 | 1.71e-21 | 101 |
| MS.gene072795.t1 | AT3G60330 | 22.711 | 568 | 342 | 18 | 448 | 950 | 140 | 675 | 4.05e-21 | 100 |
| MS.gene072795.t1 | AT3G60330 | 22.711 | 568 | 342 | 18 | 448 | 950 | 140 | 675 | 4.05e-21 | 100 |
| MS.gene072795.t1 | AT3G47950 | 23.243 | 555 | 343 | 17 | 458 | 950 | 150 | 683 | 8.03e-21 | 99.4 |
| MS.gene072795.t1 | AT3G47950 | 23.243 | 555 | 343 | 17 | 458 | 950 | 150 | 683 | 8.03e-21 | 99.4 |
| MS.gene072795.t1 | AT3G22910 | 23.105 | 554 | 313 | 16 | 468 | 910 | 245 | 796 | 1.41e-20 | 98.6 |
| MS.gene072795.t1 | AT2G24520 | 23.949 | 547 | 325 | 16 | 458 | 939 | 187 | 707 | 1.13e-19 | 95.5 |
| MS.gene072795.t1 | AT2G24520 | 23.949 | 547 | 325 | 16 | 458 | 939 | 124 | 644 | 1.28e-19 | 95.5 |
| MS.gene072795.t1 | AT2G24520 | 23.949 | 547 | 325 | 16 | 458 | 939 | 124 | 644 | 1.28e-19 | 95.5 |
| MS.gene072795.t1 | AT1G27770 | 34.659 | 176 | 86 | 5 | 785 | 931 | 653 | 828 | 1.71e-19 | 95.1 |
| MS.gene072795.t1 | AT1G27770 | 34.659 | 176 | 86 | 5 | 785 | 931 | 653 | 828 | 1.71e-19 | 95.1 |
| MS.gene072795.t1 | AT1G27770 | 34.659 | 176 | 86 | 5 | 785 | 931 | 590 | 765 | 1.93e-19 | 94.7 |
| MS.gene072795.t1 | AT2G18960 | 22.482 | 556 | 329 | 16 | 458 | 946 | 142 | 662 | 2.39e-19 | 94.7 |
| MS.gene072795.t1 | AT2G18960 | 22.482 | 556 | 329 | 16 | 458 | 946 | 78 | 598 | 3.00e-19 | 94.4 |
| MS.gene072795.t1 | AT2G18960 | 22.482 | 556 | 329 | 16 | 458 | 946 | 78 | 598 | 3.00e-19 | 94.4 |
| MS.gene072795.t1 | AT2G07560 | 22.180 | 532 | 320 | 16 | 455 | 920 | 144 | 647 | 3.14e-19 | 94.4 |
| MS.gene072795.t1 | AT4G37640 | 33.523 | 176 | 88 | 4 | 785 | 931 | 650 | 825 | 3.61e-19 | 94.0 |
| MS.gene072795.t1 | AT2G22950 | 33.523 | 176 | 88 | 4 | 785 | 931 | 651 | 826 | 8.27e-19 | 92.8 |
| MS.gene072795.t1 | AT3G57330 | 32.402 | 179 | 93 | 2 | 783 | 933 | 640 | 818 | 1.37e-18 | 92.0 |
| MS.gene072795.t1 | AT3G57330 | 32.402 | 179 | 93 | 2 | 783 | 933 | 585 | 763 | 1.69e-18 | 91.7 |
| MS.gene072795.t1 | AT1G07670 | 31.646 | 158 | 76 | 3 | 785 | 910 | 623 | 780 | 6.97e-17 | 86.7 |
| MS.gene072795.t1 | AT1G07670 | 31.646 | 158 | 76 | 3 | 785 | 910 | 623 | 780 | 6.97e-17 | 86.7 |
| MS.gene072795.t1 | AT1G07810 | 31.646 | 158 | 76 | 3 | 785 | 910 | 623 | 780 | 8.41e-17 | 86.3 |
| MS.gene072795.t1 | AT3G63380 | 32.704 | 159 | 74 | 2 | 785 | 910 | 642 | 800 | 1.99e-16 | 85.1 |
| MS.gene072795.t1 | AT3G21180 | 30.939 | 181 | 92 | 3 | 786 | 933 | 694 | 874 | 3.10e-16 | 84.7 |
| MS.gene072795.t1 | AT5G57110 | 29.282 | 181 | 95 | 2 | 786 | 933 | 677 | 857 | 3.31e-16 | 84.3 |
| MS.gene072795.t1 | AT5G57110 | 29.282 | 181 | 95 | 2 | 786 | 933 | 677 | 857 | 3.31e-16 | 84.3 |
| MS.gene072795.t1 | AT5G57110 | 29.282 | 181 | 95 | 2 | 786 | 933 | 677 | 857 | 3.31e-16 | 84.3 |
| MS.gene072795.t1 | AT4G29900 | 30.387 | 181 | 93 | 3 | 786 | 933 | 681 | 861 | 5.78e-16 | 83.6 |
| MS.gene072795.t1 | AT4G29900 | 30.387 | 181 | 93 | 3 | 786 | 933 | 681 | 861 | 5.78e-16 | 83.6 |
| MS.gene072795.t1 | AT2G24520 | 24.500 | 400 | 226 | 11 | 606 | 939 | 12 | 401 | 9.64e-16 | 82.4 |
| MS.gene072795.t1 | AT1G10130 | 30.573 | 157 | 78 | 1 | 785 | 910 | 584 | 740 | 7.51e-15 | 80.1 |
| MS.gene072795.t1 | AT5G57350 | 29.231 | 195 | 98 | 4 | 782 | 946 | 217 | 401 | 9.55e-15 | 79.3 |
| MS.gene072795.t1 | AT5G57350 | 29.231 | 195 | 98 | 4 | 782 | 946 | 479 | 663 | 1.30e-14 | 79.3 |
| MS.gene072795.t1 | AT5G57350 | 29.231 | 195 | 98 | 4 | 782 | 946 | 479 | 663 | 1.30e-14 | 79.3 |
| MS.gene072795.t1 | AT5G57350 | 29.231 | 195 | 98 | 4 | 782 | 946 | 479 | 663 | 1.30e-14 | 79.3 |
| MS.gene072795.t1 | AT4G00900 | 30.625 | 160 | 77 | 2 | 785 | 910 | 617 | 776 | 3.17e-14 | 78.2 |
| MS.gene072795.t1 | AT4G00900 | 30.625 | 160 | 77 | 2 | 785 | 910 | 617 | 776 | 3.17e-14 | 78.2 |
| MS.gene072795.t1 | AT4G30190 | 28.205 | 195 | 100 | 4 | 782 | 946 | 478 | 662 | 8.09e-14 | 76.6 |
| MS.gene072795.t1 | AT3G42640 | 30.769 | 169 | 86 | 3 | 782 | 920 | 481 | 648 | 1.42e-13 | 75.9 |
| MS.gene072795.t1 | AT1G80660 | 27.568 | 185 | 96 | 3 | 785 | 931 | 357 | 541 | 7.19e-13 | 73.6 |
| MS.gene072795.t1 | AT1G80660 | 29.518 | 166 | 86 | 3 | 785 | 920 | 486 | 650 | 8.67e-13 | 73.2 |
| MS.gene072795.t1 | AT1G80660 | 29.518 | 166 | 86 | 3 | 785 | 920 | 486 | 650 | 9.00e-13 | 73.2 |
| MS.gene072795.t1 | AT1G80660 | 29.518 | 166 | 86 | 3 | 785 | 920 | 486 | 650 | 9.08e-13 | 73.2 |
Find 231 sgRNAs with CRISPR-Local
Find 386 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTCCATGTAGCCGTTTAA+TGG | 0.160058 | 5.3:+4041976 | None:intergenic |
| CTCAATTATGTTTGGGCTTT+GGG | 0.163205 | 5.3:-4036983 | MS.gene072795:CDS |
| TTCTGATGGGCTTGTTGTTT+GGG | 0.168913 | 5.3:-4039705 | MS.gene072795:CDS |
| TACCAAAGGCACAAAGTATT+TGG | 0.170253 | 5.3:+4039463 | None:intergenic |
| GCAAATAATGGTCGGTAATA+AGG | 0.177452 | 5.3:-4038188 | MS.gene072795:CDS |
| GTCAAGGCTGTTCAGCTTCT+TGG | 0.179922 | 5.3:+4036811 | None:intergenic |
| CTTCTGATGGGCTTGTTGTT+TGG | 0.184672 | 5.3:-4039706 | MS.gene072795:CDS |
| ACTGGTCCCCGCCTCGTCTT+TGG | 0.216916 | 5.3:+4042096 | None:intergenic |
| ATTGCCTGCCCTTGTGCTTT+GGG | 0.277345 | 5.3:-4039169 | MS.gene072795:CDS |
| CATCTACAGCTTCCAAGATT+TGG | 0.282832 | 5.3:+4040602 | None:intergenic |
| CCTCAATTATGTTTGGGCTT+TGG | 0.283004 | 5.3:-4036984 | MS.gene072795:CDS |
| CTTCTGTTGCTAAAGCTACT+TGG | 0.285373 | 5.3:+4040665 | None:intergenic |
| CTGGTCCCCGCCTCGTCTTT+GGG | 0.286272 | 5.3:+4042097 | None:intergenic |
| GAAACAAAATCTCGGGCTTC+TGG | 0.288098 | 5.3:+4038250 | None:intergenic |
| TTTGAGGGCTGCTACTTCTA+AGG | 0.296547 | 5.3:-4039978 | MS.gene072795:CDS |
| TACTGCTATATTGTTGAGTT+TGG | 0.296733 | 5.3:-4039822 | MS.gene072795:CDS |
| TTCCAAATACTTTGTGCCTT+TGG | 0.299972 | 5.3:-4039465 | MS.gene072795:intron |
| TATTGCCTGCCCTTGTGCTT+TGG | 0.308202 | 5.3:-4039170 | MS.gene072795:CDS |
| GAGTTTGATCATGGCATTAT+TGG | 0.311760 | 5.3:+4040501 | None:intergenic |
| CTTATTTCGTTTATTCTGTT+AGG | 0.315628 | 5.3:-4039917 | MS.gene072795:CDS |
| AGCCACACCTACTGCTGTTA+TGG | 0.315710 | 5.3:-4039143 | MS.gene072795:CDS |
| TTCTAAAGTCTATGAAAATT+AGG | 0.317325 | 5.3:-4037997 | MS.gene072795:CDS |
| AAGATGAAGAGAACCCTTCT+TGG | 0.320952 | 5.3:-4038273 | MS.gene072795:CDS |
| CACTGGAGTTGGTGCATCTC+AGG | 0.324242 | 5.3:-4039116 | MS.gene072795:CDS |
| TCTTATAAAGCAGACATAAC+AGG | 0.327815 | 5.3:-4040403 | MS.gene072795:CDS |
| CGGTTGCCGCCTTGGATCGC+TGG | 0.329851 | 5.3:-4036902 | MS.gene072795:CDS |
| GAAGACGGTATCCAGGATTT+CGG | 0.331287 | 5.3:+4039241 | None:intergenic |
| TGATGTGATTAAGATTATTC+CGG | 0.335725 | 5.3:-4039741 | MS.gene072795:CDS |
| AAATGCGATCAGCAAACTTC+TGG | 0.335934 | 5.3:+4039486 | None:intergenic |
| CAGGCTTTCGGTTGCCGCCT+TGG | 0.339159 | 5.3:-4036910 | MS.gene072795:CDS |
| CCATCCTTCGTTTCGAAAAC+AGG | 0.340257 | 5.3:+4042165 | None:intergenic |
| TCAAGGCTGTTCAGCTTCTT+GGG | 0.342772 | 5.3:+4036812 | None:intergenic |
| GTATACGCCTCAATTATGTT+TGG | 0.343337 | 5.3:-4036991 | MS.gene072795:CDS |
| GTATGCCGTATACAAATAAA+AGG | 0.345506 | 5.3:-4040757 | MS.gene072795:CDS |
| ATGGCGAAGGGAATGTTGTT+GGG | 0.353350 | 5.3:-4039799 | MS.gene072795:CDS |
| CTCAACAATATAGCAGTATC+AGG | 0.355057 | 5.3:+4039827 | None:intergenic |
| ATCTCTTCTTCCACCTTCAC+TGG | 0.360798 | 5.3:+4040315 | None:intergenic |
| TATACGCCTCAATTATGTTT+GGG | 0.364978 | 5.3:-4036990 | MS.gene072795:CDS |
| ATCTGCTTTCTGATCCGGTT+TGG | 0.369734 | 5.3:+4037892 | None:intergenic |
| ACTTTATCTGCTTTCTGATC+CGG | 0.372861 | 5.3:+4037887 | None:intergenic |
| AAGACGGTATCCAGGATTTC+GGG | 0.380000 | 5.3:+4039242 | None:intergenic |
| GCGTCGTGGTTCTGCTAATA+TGG | 0.383420 | 5.3:-4040056 | MS.gene072795:CDS |
| TTTGAGCTTGCTCTGCAGTT+TGG | 0.384745 | 5.3:-4039208 | MS.gene072795:CDS |
| AAGACCGGTACTCTTACTAT+TGG | 0.390330 | 5.3:-4038638 | MS.gene072795:CDS |
| GGCAACCGAAAGCCTGTAGA+AGG | 0.392593 | 5.3:+4036917 | None:intergenic |
| CAAATAATGGTCGGTAATAA+GGG | 0.394214 | 5.3:-4038187 | MS.gene072795:CDS |
| GATGGCGAAGGGAATGTTGT+TGG | 0.397682 | 5.3:-4039800 | MS.gene072795:CDS |
| TGGCTATGAGTAATGATGTT+TGG | 0.400777 | 5.3:+4040622 | None:intergenic |
| TCTATAAATGGGGAAGTAGC+TGG | 0.405499 | 5.3:-4038073 | MS.gene072795:CDS |
| TCAGCTCTAAAAGCCCTTCC+TGG | 0.406405 | 5.3:-4040700 | MS.gene072795:CDS |
| CAACAAGTTCATAGAATTCC+CGG | 0.406563 | 5.3:+4038570 | None:intergenic |
| TCATGGTGACTGGAGACAAC+TGG | 0.411106 | 5.3:-4037970 | MS.gene072795:CDS |
| TGGCTTGCCTGGTTCTTAGC+TGG | 0.413456 | 5.3:-4039280 | MS.gene072795:CDS |
| GATGTGATTAAGATTATTCC+GGG | 0.416786 | 5.3:-4039740 | MS.gene072795:CDS |
| AAAGCCCTTCCTGGAGTTGT+TGG | 0.420383 | 5.3:-4040691 | MS.gene072795:CDS |
| ACTTGTTGAGTCTGCTCAAA+TGG | 0.423294 | 5.3:-4039522 | MS.gene072795:CDS |
| GACGAGGCGGGGACCAGTAC+CGG | 0.423853 | 5.3:-4042091 | MS.gene072795:CDS |
| GGACGAAGCGGGGCCGGTAC+TGG | 0.425038 | 5.3:+4042078 | None:intergenic |
| AAAAGAACTCCAGCTGCTAT+TGG | 0.426533 | 5.3:+4036941 | None:intergenic |
| CGTTCGTAACAAGCAAATAA+TGG | 0.436023 | 5.3:-4038200 | MS.gene072795:CDS |
| CATTACTCATAGCCAAATCT+TGG | 0.439206 | 5.3:-4040614 | MS.gene072795:CDS |
| CTTGGCATTCCAATAGCAGC+TGG | 0.440345 | 5.3:-4036950 | MS.gene072795:CDS |
| TATTGGAGAGGTTATTCGTT+GGG | 0.440502 | 5.3:-4040143 | MS.gene072795:CDS |
| ATCATGCTTACCCGAAATCC+TGG | 0.442883 | 5.3:-4039252 | MS.gene072795:CDS |
| AATTCCATTGCAAGGGAAGT+TGG | 0.443142 | 5.3:-4037938 | MS.gene072795:CDS |
| TTCTGGGTACACGGTGGCTA+TGG | 0.446961 | 5.3:-4037179 | MS.gene072795:CDS |
| GGTGCAAAAGTTGCTTCTGA+TGG | 0.448482 | 5.3:-4039719 | MS.gene072795:CDS |
| GGTCGGTAATAAGGGCTTGA+TGG | 0.449447 | 5.3:-4038179 | MS.gene072795:CDS |
| GCTTTGGGTTATAATTTGCT+TGG | 0.454401 | 5.3:-4036968 | MS.gene072795:CDS |
| AGCTTTGGAAAGTGCACATA+AGG | 0.456783 | 5.3:-4039071 | MS.gene072795:intron |
| TTCTGTTGCTAAAGCTACTT+GGG | 0.456910 | 5.3:+4040666 | None:intergenic |
| ATGACTTGCTCTGCTTGCGC+TGG | 0.457135 | 5.3:-4042013 | MS.gene072795:CDS |
| GCCGAAAACATGGCTCAAAC+AGG | 0.459491 | 5.3:-4038106 | MS.gene072795:CDS |
| CTCTGCTTGCGCTGGATCTG+TGG | 0.460330 | 5.3:-4042005 | MS.gene072795:CDS |
| CATGTTAAGGCAACGAAGGT+TGG | 0.462412 | 5.3:-4039575 | MS.gene072795:CDS |
| GATCAAAGGAGGGCAAGCTT+TGG | 0.463274 | 5.3:-4039086 | MS.gene072795:CDS |
| TTGGATCGCTGGAGCTGCTA+TGG | 0.464018 | 5.3:-4036891 | MS.gene072795:CDS |
| CTCCATGGACGAAGCGGGGC+CGG | 0.464814 | 5.3:+4042072 | None:intergenic |
| ATCGTGAAGATGCTTACTAT+TGG | 0.467103 | 5.3:-4040160 | MS.gene072795:CDS |
| AGCTGAACAGCCTTGACATA+GGG | 0.471195 | 5.3:-4036805 | MS.gene072795:CDS |
| GCAGATGTGGGAATGGCAAT+AGG | 0.471457 | 5.3:-4037118 | MS.gene072795:CDS |
| TCTCGGGCTTCTGGCCAAGA+AGG | 0.471879 | 5.3:+4038259 | None:intergenic |
| GGAAGAAATTGATAGTAGGT+TGG | 0.473391 | 5.3:-4039774 | MS.gene072795:CDS |
| TACCGGCCCCGCTTCGTCCA+TGG | 0.473737 | 5.3:-4042074 | MS.gene072795:CDS |
| GAAACCTCCATGGACGAAGC+GGG | 0.474259 | 5.3:+4042067 | None:intergenic |
| GTTAGTTACGTTAACAAAAG+AGG | 0.475187 | 5.3:+4041901 | None:intergenic |
| GGGAGGAAGAAATTGATAGT+AGG | 0.480054 | 5.3:-4039778 | MS.gene072795:CDS |
| TTAGTTACGTTAACAAAAGA+GGG | 0.481692 | 5.3:+4041902 | None:intergenic |
| AGGAAAGGTGATACTGTTAT+CGG | 0.485797 | 5.3:-4039626 | MS.gene072795:CDS |
| TCTTGAGCACCTGGTTTCAG+TGG | 0.486773 | 5.3:+4038031 | None:intergenic |
| TTGGGGTAAGAAGGCATTGA+AGG | 0.488460 | 5.3:+4042115 | None:intergenic |
| CTATAAATGGGGAAGTAGCT+GGG | 0.488705 | 5.3:-4038072 | MS.gene072795:CDS |
| AGACCGGTACTCTTACTATT+GGG | 0.489290 | 5.3:-4038637 | MS.gene072795:CDS |
| ATCTTCGACGAGTTTGATCA+TGG | 0.490734 | 5.3:+4040492 | None:intergenic |
| CTGTGGAGAAATCCATTAAA+CGG | 0.491300 | 5.3:-4041988 | MS.gene072795:CDS |
| GTGTGTAATTCTAAAACTCC+AGG | 0.492652 | 5.3:+4040454 | None:intergenic |
| TGTTATTGCTGAAGCCAAAC+CGG | 0.492883 | 5.3:-4037906 | MS.gene072795:CDS |
| GTGCAAAAGTTGCTTCTGAT+GGG | 0.493563 | 5.3:-4039718 | MS.gene072795:CDS |
| AACTAGTAATGGAAATTTGA+AGG | 0.493572 | 5.3:-4040350 | MS.gene072795:CDS |
| GTCCATGGAAGACGGTATCC+AGG | 0.495093 | 5.3:+4039234 | None:intergenic |
| CAGTAATGGAAACAAAATCT+CGG | 0.495105 | 5.3:+4038242 | None:intergenic |
| TTGGAAGCTGTAGATGAAGC+TGG | 0.500496 | 5.3:-4040595 | MS.gene072795:CDS |
| TTCGTTTCGAAAACAGGCTA+AGG | 0.508090 | 5.3:+4042171 | None:intergenic |
| GCAGTTTGGAATTTCTGTCA+TGG | 0.508557 | 5.3:-4039194 | MS.gene072795:CDS |
| AAATCCATTAAACGGCTACA+TGG | 0.508653 | 5.3:-4041980 | MS.gene072795:CDS |
| GTTATGGTTGGCACTGGAGT+TGG | 0.509447 | 5.3:-4039127 | MS.gene072795:CDS |
| GTGAATGAGAGTATGATAAC+TGG | 0.512746 | 5.3:-4039671 | MS.gene072795:CDS |
| GAAATCACTTCTTGAGCACC+TGG | 0.516021 | 5.3:+4038022 | None:intergenic |
| AAGCTGAACAGCCTTGACAT+AGG | 0.516431 | 5.3:-4036806 | MS.gene072795:CDS |
| CGAAACCTCCATGGACGAAG+CGG | 0.516974 | 5.3:+4042066 | None:intergenic |
| TCTTACCCCAAAGACGAGGC+GGG | 0.518671 | 5.3:-4042103 | MS.gene072795:CDS |
| CGATCAGCAAACTTCTGGAC+AGG | 0.520178 | 5.3:+4039491 | None:intergenic |
| TATGGATGTGCTGATAGCAC+TGG | 0.521417 | 5.3:-4040038 | MS.gene072795:CDS |
| TTTGTTTCCATTACTGGACA+TGG | 0.523642 | 5.3:-4038235 | MS.gene072795:CDS |
| GCCTCGTCTTTGGGGTAAGA+AGG | 0.526182 | 5.3:+4042106 | None:intergenic |
| CTTTACTCCATGTCCAGTAA+TGG | 0.526279 | 5.3:+4038228 | None:intergenic |
| TTCGTCCATGGAGGTTTCGA+AGG | 0.526752 | 5.3:-4042062 | MS.gene072795:CDS |
| CATGGTGACTGGAGACAACT+GGG | 0.527270 | 5.3:-4037969 | MS.gene072795:CDS |
| ATTAGGAGCATCATGGTGAC+TGG | 0.527343 | 5.3:-4037980 | MS.gene072795:CDS |
| GAATGGTGTCTTGCATGTTA+AGG | 0.527353 | 5.3:-4039588 | MS.gene072795:CDS |
| TGGTCCCCGCCTCGTCTTTG+GGG | 0.531488 | 5.3:+4042098 | None:intergenic |
| AATTCCAACTTCCCTTGCAA+TGG | 0.532336 | 5.3:+4037934 | None:intergenic |
| ATCACATTAATGAAATCCCT+TGG | 0.532861 | 5.3:+4040379 | None:intergenic |
| CTATTGGAGAGGTTATTCGT+TGG | 0.536377 | 5.3:-4040144 | MS.gene072795:CDS |
| TAAACCCAAAGCACAAGGGC+AGG | 0.536972 | 5.3:+4039165 | None:intergenic |
| TGTTGAGTTTGGATGGCGAA+GGG | 0.537106 | 5.3:-4039811 | MS.gene072795:CDS |
| GCTATATTGTTGAGTTTGGA+TGG | 0.539889 | 5.3:-4039818 | MS.gene072795:CDS |
| ATCCTGGATACCGTCTTCCA+TGG | 0.540536 | 5.3:-4039236 | MS.gene072795:CDS |
| AGTAATGGAAACAAAATCTC+GGG | 0.540576 | 5.3:+4038243 | None:intergenic |
| TGCACTTGTAGCAGCAGATG+TGG | 0.540700 | 5.3:-4037131 | MS.gene072795:CDS |
| GATTCTCTTCGATCACTCCC+TGG | 0.541274 | 5.3:-4040472 | MS.gene072795:CDS |
| TGGCACAGACATTGCTATTG+AGG | 0.544713 | 5.3:-4037092 | MS.gene072795:CDS |
| AGCAAGCTCAAAGCTGTCCA+TGG | 0.545005 | 5.3:+4039219 | None:intergenic |
| TGTACTAATGAAGAGCAACT+TGG | 0.545258 | 5.3:-4037059 | MS.gene072795:CDS |
| ATAGCAGCTCCAGCGATCCA+AGG | 0.546487 | 5.3:+4036893 | None:intergenic |
| CATTACTGGACATGGAGTAA+AGG | 0.547296 | 5.3:-4038227 | MS.gene072795:CDS |
| CACCCGAAAATGAACTGCAC+TGG | 0.547314 | 5.3:+4040109 | None:intergenic |
| ACATCTGCTGCTACAAGTGC+AGG | 0.550045 | 5.3:+4037133 | None:intergenic |
| ATGGAGGTTTCGAAGGTCAC+GGG | 0.552184 | 5.3:-4042055 | MS.gene072795:CDS |
| GGCTCCAACAACTCCAGGAA+GGG | 0.555414 | 5.3:+4040687 | None:intergenic |
| CAATCGTCATGTATGATCAA+AGG | 0.557472 | 5.3:+4036755 | None:intergenic |
| GCAAACAACACTGACAGAAG+AGG | 0.559172 | 5.3:+4036865 | None:intergenic |
| TCTCTTCTTCCACCTTCACT+GGG | 0.559842 | 5.3:+4040316 | None:intergenic |
| TCTGATGGGCTTGTTGTTTG+GGG | 0.559897 | 5.3:-4039704 | MS.gene072795:CDS |
| AAAATATTTCCCAGTGAAGG+TGG | 0.561487 | 5.3:-4040325 | MS.gene072795:CDS |
| AGTAGATCTTCAGCAACAGC+AGG | 0.561622 | 5.3:+4038136 | None:intergenic |
| AGGCACGTCCTGTGTCTAAG+AGG | 0.562376 | 5.3:-4039646 | MS.gene072795:CDS |
| TCACCTTTCCTCTTAGACAC+AGG | 0.563727 | 5.3:+4039638 | None:intergenic |
| GGTGAAAGATGACGCGGGCA+CGG | 0.564785 | 5.3:+4041924 | None:intergenic |
| CTTATAAAGCAGACATAACA+GGG | 0.566000 | 5.3:-4040402 | MS.gene072795:CDS |
| CATTATTTGCTTGTTACGAA+CGG | 0.566291 | 5.3:+4038201 | None:intergenic |
| TCAACAACGGCCTTAGCTAG+TGG | 0.566415 | 5.3:+4038313 | None:intergenic |
| ACTGCTGTTATGGTTGGCAC+TGG | 0.566537 | 5.3:-4039133 | MS.gene072795:CDS |
| ATGGTGTTTATGTATATACC+TGG | 0.568017 | 5.3:-4040208 | MS.gene072795:CDS |
| CTCGGGCTTCTGGCCAAGAA+GGG | 0.570108 | 5.3:+4038260 | None:intergenic |
| ACTAATGAAGAGCAACTTGG+AGG | 0.572225 | 5.3:-4037056 | MS.gene072795:CDS |
| ACTGGAGTTGGTGCATCTCA+GGG | 0.572906 | 5.3:-4039115 | MS.gene072795:CDS |
| CAGGGTGTATTGATCAAAGG+AGG | 0.574494 | 5.3:-4039097 | MS.gene072795:CDS |
| CAGTGAACATCCACTAGCTA+AGG | 0.574741 | 5.3:-4038323 | MS.gene072795:CDS |
| ACACCTACTGCTGTTATGGT+TGG | 0.577479 | 5.3:-4039139 | MS.gene072795:CDS |
| TGTAGCAGCAGATGTGGGAA+TGG | 0.580641 | 5.3:-4037125 | MS.gene072795:CDS |
| AGTAGCTTTAGCAACAGAAG+AGG | 0.581864 | 5.3:-4040662 | MS.gene072795:CDS |
| GGGCTCCAACAACTCCAGGA+AGG | 0.582459 | 5.3:+4040686 | None:intergenic |
| AAGCAGACATAACAGGGCCA+AGG | 0.582491 | 5.3:-4040396 | MS.gene072795:CDS |
| CGAAGGGAATGTTGTTGGGG+AGG | 0.585027 | 5.3:-4039795 | MS.gene072795:CDS |
| TGGCGAAGGGAATGTTGTTG+GGG | 0.586516 | 5.3:-4039798 | MS.gene072795:CDS |
| ACTTGGGCTCCAACAACTCC+AGG | 0.586558 | 5.3:+4040682 | None:intergenic |
| AACTGCTAATTCCATTGCAA+GGG | 0.588246 | 5.3:-4037945 | MS.gene072795:CDS |
| CCAAAGCCCAAACATAATTG+AGG | 0.588978 | 5.3:+4036984 | None:intergenic |
| CGTGACCTTCGAAACCTCCA+TGG | 0.589263 | 5.3:+4042057 | None:intergenic |
| GTGGCTAAACCCAAAGCACA+AGG | 0.589800 | 5.3:+4039160 | None:intergenic |
| TGGTGAGATCGCCTTCCACA+TGG | 0.590453 | 5.3:+4040521 | None:intergenic |
| ACTTGCTGAAGCCGAAAACA+TGG | 0.591432 | 5.3:-4038116 | MS.gene072795:CDS |
| GGTGGAACTTTGAATGAGAA+TGG | 0.592551 | 5.3:-4039605 | MS.gene072795:CDS |
| GTGATTGTAGAAACTAGTAA+TGG | 0.593567 | 5.3:-4040361 | MS.gene072795:CDS |
| TTGTTGAGTTTGGATGGCGA+AGG | 0.594736 | 5.3:-4039812 | MS.gene072795:CDS |
| CATGGAGGTTTCGAAGGTCA+CGG | 0.594862 | 5.3:-4042056 | MS.gene072795:CDS |
| GGGTACACGGTGGCTATGGT+CGG | 0.595035 | 5.3:-4037175 | MS.gene072795:CDS |
| AACCATAACAGCAGTAGGTG+TGG | 0.596571 | 5.3:+4039141 | None:intergenic |
| TGGGGTAAGAAGGCATTGAA+GGG | 0.597959 | 5.3:+4042116 | None:intergenic |
| TATGAAAATTAGGAGCATCA+TGG | 0.598156 | 5.3:-4037987 | MS.gene072795:CDS |
| GTGGGAATGGCAATAGGTGC+TGG | 0.599052 | 5.3:-4037112 | MS.gene072795:CDS |
| AAGCAGAGCAAGTCATTCCA+TGG | 0.600537 | 5.3:+4042020 | None:intergenic |
| AGCAGACATAACAGGGCCAA+GGG | 0.601857 | 5.3:-4040395 | MS.gene072795:CDS |
| ATATCTGATCCACTGAAACC+AGG | 0.604258 | 5.3:-4038040 | MS.gene072795:CDS |
| CGTCCTGTGTCTAAGAGGAA+AGG | 0.608923 | 5.3:-4039641 | MS.gene072795:CDS |
| TCTCAGGGTGTATTGATCAA+AGG | 0.609729 | 5.3:-4039100 | MS.gene072795:CDS |
| TTCTTACCCCAAAGACGAGG+CGG | 0.609821 | 5.3:-4042104 | MS.gene072795:CDS |
| GCGAAAATATTTCCCAGTGA+AGG | 0.609868 | 5.3:-4040328 | MS.gene072795:CDS |
| AAAATCGATCTCCATGTGGA+AGG | 0.611046 | 5.3:-4040532 | MS.gene072795:CDS |
| GAACTGCTAATTCCATTGCA+AGG | 0.612986 | 5.3:-4037946 | MS.gene072795:CDS |
| TCAAAGCTGTCCATGGAAGA+CGG | 0.613051 | 5.3:+4039226 | None:intergenic |
| AAACCTCCATGGACGAAGCG+GGG | 0.613852 | 5.3:+4042068 | None:intergenic |
| GAAGATGCTTACTATTGGAG+AGG | 0.619198 | 5.3:-4040155 | MS.gene072795:CDS |
| ATAGGAGGAGGCTATTTGTG+AGG | 0.619468 | 5.3:-4040845 | MS.gene072795:intron |
| GTGCCAACCATAACAGCAGT+AGG | 0.620470 | 5.3:+4039136 | None:intergenic |
| CGTAACAAGCAAATAATGGT+CGG | 0.624159 | 5.3:-4038196 | MS.gene072795:CDS |
| TATTTGCTTGTTACGAACGG+TGG | 0.624706 | 5.3:+4038204 | None:intergenic |
| CTTCCCAATAGTAAGAGTAC+CGG | 0.625745 | 5.3:+4038634 | None:intergenic |
| TGTGAGGCAATTGAAGACGC+TGG | 0.626299 | 5.3:-4040829 | MS.gene072795:CDS |
| TAGAGCTGATTCAACCGCGG+TGG | 0.632104 | 5.3:+4040714 | None:intergenic |
| TATAAATGGGGAAGTAGCTG+GGG | 0.633789 | 5.3:-4038071 | MS.gene072795:CDS |
| TGAACTTGTTGCTGCAGCTG+AGG | 0.636560 | 5.3:-4038558 | MS.gene072795:intron |
| GCACTTGTAGCAGCAGATGT+GGG | 0.637701 | 5.3:-4037130 | MS.gene072795:CDS |
| CTTACCCCAAAGACGAGGCG+GGG | 0.641802 | 5.3:-4042102 | MS.gene072795:CDS |
| CTTGCATGTTAAGGCAACGA+AGG | 0.645262 | 5.3:-4039579 | MS.gene072795:CDS |
| GCAGCTCCAGCGATCCAAGG+CGG | 0.645327 | 5.3:+4036896 | None:intergenic |
| GCTGAACAGCCTTGACATAG+GGG | 0.650613 | 5.3:-4036804 | MS.gene072795:CDS |
| TGTGTAATTCTAAAACTCCA+GGG | 0.652850 | 5.3:+4040455 | None:intergenic |
| AAAGGTGATACTGTTATCGG+TGG | 0.655577 | 5.3:-4039623 | MS.gene072795:CDS |
| CGGCCCCGCTTCGTCCATGG+AGG | 0.656137 | 5.3:-4042071 | MS.gene072795:CDS |
| GCCTTCTTACCCCAAAGACG+AGG | 0.657096 | 5.3:-4042107 | MS.gene072795:CDS |
| CTGAACAGCCTTGACATAGG+GGG | 0.658953 | 5.3:-4036803 | MS.gene072795:CDS |
| GCAACCGAAAGCCTGTAGAA+GGG | 0.668289 | 5.3:+4036918 | None:intergenic |
| ATTGAAGGGTAGTGAGATCG+AGG | 0.668350 | 5.3:+4042130 | None:intergenic |
| AAGAGGGGTGAAAGATGACG+CGG | 0.668486 | 5.3:+4041918 | None:intergenic |
| TCTGTTAGGAAAGTATCTTG+AGG | 0.673983 | 5.3:-4039903 | MS.gene072795:CDS |
| AGGGTGTATTGATCAAAGGA+GGG | 0.674325 | 5.3:-4039096 | MS.gene072795:CDS |
| GCTTATAAATCATTGCGTCG+TGG | 0.674394 | 5.3:-4040070 | MS.gene072795:CDS |
| TAGTTACGTTAACAAAAGAG+GGG | 0.682840 | 5.3:+4041903 | None:intergenic |
| ACGGTGGCTATGGTCGGCGA+CGG | 0.683789 | 5.3:-4037169 | MS.gene072795:CDS |
| TGAAGACGCTGGATTTGACG+CGG | 0.689222 | 5.3:-4040818 | MS.gene072795:CDS |
| ATGGATGTGCTGATAGCACT+GGG | 0.694300 | 5.3:-4040037 | MS.gene072795:CDS |
| AGGTATATACATAAACACCA+TGG | 0.708250 | 5.3:+4040210 | None:intergenic |
| TCAGGCTTCTGGGTACACGG+TGG | 0.712769 | 5.3:-4037185 | MS.gene072795:intron |
| AGAGGGGTGAAAGATGACGC+GGG | 0.716184 | 5.3:+4041919 | None:intergenic |
| TGGCTAAACCCAAAGCACAA+GGG | 0.722049 | 5.3:+4039161 | None:intergenic |
| TGAGAGTATGATAACTGGTG+AGG | 0.727598 | 5.3:-4039666 | MS.gene072795:CDS |
| AAGCAAAATCGATCTCCATG+TGG | 0.735028 | 5.3:-4040536 | MS.gene072795:CDS |
| ATGCACGTCGTGTTCCACCG+CGG | 0.778510 | 5.3:-4040728 | MS.gene072795:CDS |
| ATGGTGACTGGAGACAACTG+GGG | 0.796917 | 5.3:-4037968 | MS.gene072795:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATAGACTAAATTATATTA+GGG | + | chr5.3:4037607-4037626 | None:intergenic | 10.0% |
| !! | TTTGAATATAATGTTAAAAA+TGG | - | chr5.3:4040137-4040156 | MS.gene072795:CDS | 10.0% |
| !! | AATAGACTAAATTATATTAG+GGG | + | chr5.3:4037606-4037625 | None:intergenic | 15.0% |
| !! | CATATCATATCATTATAATA+TGG | + | chr5.3:4039515-4039534 | None:intergenic | 15.0% |
| !! | CTAATAGACTAAATTATATT+AGG | + | chr5.3:4037608-4037627 | None:intergenic | 15.0% |
| !! | TCAATTATCTATAATTCTAT+AGG | - | chr5.3:4041288-4041307 | MS.gene072795:intron | 15.0% |
| !!! | AATTTTAGTATCTATAAATG+GGG | - | chr5.3:4040858-4040877 | MS.gene072795:intron | 15.0% |
| !!! | GAATTTTAGTATCTATAAAT+GGG | - | chr5.3:4040857-4040876 | MS.gene072795:intron | 15.0% |
| !!! | GTTTTTGATATAAACTATAA+AGG | + | chr5.3:4041477-4041496 | None:intergenic | 15.0% |
| !!! | TTTAATTTTATTTTCATAGG+AGG | - | chr5.3:4038081-4038100 | MS.gene072795:CDS | 15.0% |
| !! | AATCTATTATTAACAAACAC+CGG | + | chr5.3:4040068-4040087 | None:intergenic | 20.0% |
| !! | ACCTGGAATAAAAAATTTAT+TGG | - | chr5.3:4038750-4038769 | MS.gene072795:intron | 20.0% |
| !! | CAACTCATATATAAATACTA+CGG | + | chr5.3:4037881-4037900 | None:intergenic | 20.0% |
| !! | CACAAAAAAAAAACATGTAT+CGG | + | chr5.3:4037667-4037686 | None:intergenic | 20.0% |
| !! | GTTCAAAATGCAAAATATAA+GGG | - | chr5.3:4037786-4037805 | MS.gene072795:intron | 20.0% |
| !! | TACAAAACTATTGACAAAAA+TGG | - | chr5.3:4040344-4040363 | MS.gene072795:CDS | 20.0% |
| !! | TCAAGAAAATTGAATAGAAA+AGG | + | chr5.3:4039548-4039567 | None:intergenic | 20.0% |
| !! | TGGTATAATATAATTACCAA+AGG | + | chr5.3:4039495-4039514 | None:intergenic | 20.0% |
| !!! | AAGGAATATTTTGTGTATAA+TGG | - | chr5.3:4037321-4037340 | MS.gene072795:intron | 20.0% |
| !!! | AATTTTCATAGACTTTAGAA+TGG | + | chr5.3:4040944-4040963 | None:intergenic | 20.0% |
| !!! | ACTATCTATAAAAGTATTCA+TGG | - | chr5.3:4040198-4040217 | MS.gene072795:CDS | 20.0% |
| !!! | CTCTTCATCTTTAAATTTTT+TGG | + | chr5.3:4040659-4040678 | None:intergenic | 20.0% |
| !!! | GCTATTACAAATCTTTTTTA+TGG | - | chr5.3:4038674-4038693 | MS.gene072795:intron | 20.0% |
| !!! | GGAATTTTAGTATCTATAAA+TGG | - | chr5.3:4040856-4040875 | MS.gene072795:intron | 20.0% |
| !!! | TATGTCCTTTTAAGTTATTT+TGG | + | chr5.3:4037556-4037575 | None:intergenic | 20.0% |
| !!! | TCATTCCTTTTATTTGTATA+CGG | + | chr5.3:4038192-4038211 | None:intergenic | 20.0% |
| !!! | TCCAATAAATTTTTTATTCC+AGG | + | chr5.3:4038754-4038773 | None:intergenic | 20.0% |
| !!! | TGCTATTATTTTCTATTTCA+AGG | + | chr5.3:4041369-4041388 | None:intergenic | 20.0% |
| !!! | TGTAACTTTTAGTTAACAAA+AGG | - | chr5.3:4037487-4037506 | MS.gene072795:intron | 20.0% |
| !!! | TTCTAAAGTCTATGAAAATT+AGG | - | chr5.3:4040944-4040963 | MS.gene072795:intron | 20.0% |
| ! | AAAAGAGAAAAATAACTGTG+CGG | + | chr5.3:4041412-4041431 | None:intergenic | 25.0% |
| ! | AAAGATTGAATCTCAGTAAA+CGG | + | chr5.3:4037096-4037115 | None:intergenic | 25.0% |
| ! | AAGAGATACTCATAGAAAAA+AGG | - | chr5.3:4038642-4038661 | MS.gene072795:CDS | 25.0% |
| ! | AAGGATTAAAATCTATGTCA+TGG | + | chr5.3:4041350-4041369 | None:intergenic | 25.0% |
| ! | AAGTTACAAAAACAATGATG+TGG | + | chr5.3:4037475-4037494 | None:intergenic | 25.0% |
| ! | CTTATTTCGTTTATTCTGTT+AGG | - | chr5.3:4039024-4039043 | MS.gene072795:intron | 25.0% |
| ! | GGTTCAAAATGCAAAATATA+AGG | - | chr5.3:4037785-4037804 | MS.gene072795:intron | 25.0% |
| ! | TACTAATGATCACATCATTT+AGG | - | chr5.3:4041311-4041330 | MS.gene072795:intron | 25.0% |
| ! | TCCATTTGTCATATATGTTT+AGG | - | chr5.3:4039992-4040011 | MS.gene072795:CDS | 25.0% |
| ! | TCCTAAACATATATGACAAA+TGG | + | chr5.3:4039996-4040015 | None:intergenic | 25.0% |
| ! | TGATATAAACTATAAAGGCT+AGG | + | chr5.3:4041472-4041491 | None:intergenic | 25.0% |
| ! | TGATGTGATTAAGATTATTC+CGG | - | chr5.3:4039200-4039219 | MS.gene072795:CDS | 25.0% |
| ! | TGTGACCAAAATAACTTAAA+AGG | - | chr5.3:4037548-4037567 | MS.gene072795:intron | 25.0% |
| ! | TTAGTTACGTTAACAAAAGA+GGG | + | chr5.3:4037042-4037061 | None:intergenic | 25.0% |
| ! | TTCTTCATATCAAATGAACA+TGG | + | chr5.3:4040045-4040064 | None:intergenic | 25.0% |
| !! | AACTAGTAATGGAAATTTGA+AGG | - | chr5.3:4038591-4038610 | MS.gene072795:CDS | 25.0% |
| !! | AATTTTGTTGAATTCGAGAT+TGG | + | chr5.3:4038512-4038531 | None:intergenic | 25.0% |
| !! | AGTTTTTCTTGAAAGATCAA+TGG | + | chr5.3:4041923-4041942 | None:intergenic | 25.0% |
| !! | ATTCTGTTTATTCTGTTTTG+AGG | - | chr5.3:4038947-4038966 | MS.gene072795:intron | 25.0% |
| !! | ATTTTCTATAACTGTTACTG+AGG | + | chr5.3:4040445-4040464 | None:intergenic | 25.0% |
| !! | CATACATTTTCTTCTTTTTC+AGG | - | chr5.3:4041738-4041757 | MS.gene072795:intron | 25.0% |
| !! | TTATTAATGTGTTGATGTGT+CGG | - | chr5.3:4041642-4041661 | MS.gene072795:intron | 25.0% |
| !!! | AATTTTATTTTCATAGGAGG+AGG | - | chr5.3:4038084-4038103 | MS.gene072795:CDS | 25.0% |
| !!! | AGTTTTGTATTTACTATCAC+TGG | + | chr5.3:4040333-4040352 | None:intergenic | 25.0% |
| !!! | ATGTTCTAAGATATCTGATA+AGG | - | chr5.3:4037422-4037441 | MS.gene072795:intron | 25.0% |
| !!! | CAAATCTTTTTTATGGAGTT+TGG | - | chr5.3:4038681-4038700 | MS.gene072795:intron | 25.0% |
| !!! | TATATGACAAATGGACTAAT+TGG | + | chr5.3:4039987-4040006 | None:intergenic | 25.0% |
| !!! | TCATGGTTTTACTTTTTATG+TGG | - | chr5.3:4040215-4040234 | MS.gene072795:CDS | 25.0% |
| !!! | TGCATTTCTTTTTAAGTTCT+AGG | - | chr5.3:4037815-4037834 | MS.gene072795:intron | 25.0% |
| !!! | TTCTGTTTATTCTGTTTTGA+GGG | - | chr5.3:4038948-4038967 | MS.gene072795:intron | 25.0% |
| AAGAAGTCATACTTGATTTC+AGG | + | chr5.3:4041200-4041219 | None:intergenic | 30.0% | |
| AAGGAGCTAATCTAATTCTA+AGG | + | chr5.3:4039907-4039926 | None:intergenic | 30.0% | |
| AATGTCATTGACATGTAAGT+AGG | + | chr5.3:4039597-4039616 | None:intergenic | 30.0% | |
| ACGCTTTCAATATGAATTGT+CGG | + | chr5.3:4041592-4041611 | None:intergenic | 30.0% | |
| AGATAAAGTGAAAAACTTGC+AGG | - | chr5.3:4041068-4041087 | MS.gene072795:intron | 30.0% | |
| AGATATCTGATAAGGATACA+TGG | - | chr5.3:4037430-4037449 | MS.gene072795:intron | 30.0% | |
| AGGATGTAAATTCTCATCAA+AGG | - | chr5.3:4037290-4037309 | MS.gene072795:intron | 30.0% | |
| AGGTATATACATAAACACCA+TGG | + | chr5.3:4038734-4038753 | None:intergenic | 30.0% | |
| ATCACATTAATGAAATCCCT+TGG | + | chr5.3:4038565-4038584 | None:intergenic | 30.0% | |
| ATGGTGTTTATGTATATACC+TGG | - | chr5.3:4038733-4038752 | MS.gene072795:intron | 30.0% | |
| ATTACAAACTGCTCTATAGT+TGG | - | chr5.3:4037939-4037958 | MS.gene072795:CDS | 30.0% | |
| CAAATAATGGTCGGTAATAA+GGG | - | chr5.3:4040754-4040773 | MS.gene072795:CDS | 30.0% | |
| CAGTCACAAACATATTCAAA+TGG | + | chr5.3:4040251-4040270 | None:intergenic | 30.0% | |
| CATAAAGAATGACAATGAGA+GGG | - | chr5.3:4037359-4037378 | MS.gene072795:intron | 30.0% | |
| CATATTACAAGAATCAGAAG+CGG | + | chr5.3:4037856-4037875 | None:intergenic | 30.0% | |
| CTTATAAAGCAGACATAACA+GGG | - | chr5.3:4038539-4038558 | MS.gene072795:intron | 30.0% | |
| GATGTGATTAAGATTATTCC+GGG | - | chr5.3:4039201-4039220 | MS.gene072795:CDS | 30.0% | |
| GCACAAAATGAATAAAAGAG+GGG | + | chr5.3:4037074-4037093 | None:intergenic | 30.0% | |
| GGCACAAAATGAATAAAAGA+GGG | + | chr5.3:4037075-4037094 | None:intergenic | 30.0% | |
| GGCTAAAAATTGAACAATGA+TGG | - | chr5.3:4039956-4039975 | MS.gene072795:CDS | 30.0% | |
| GTAGTTAAGTTTGTAAACGA+TGG | - | chr5.3:4037262-4037281 | MS.gene072795:intron | 30.0% | |
| GTATGCCGTATACAAATAAA+AGG | - | chr5.3:4038184-4038203 | MS.gene072795:CDS | 30.0% | |
| GTGATTGTAGAAACTAGTAA+TGG | - | chr5.3:4038580-4038599 | MS.gene072795:CDS | 30.0% | |
| GTTAGTTACGTTAACAAAAG+AGG | + | chr5.3:4037043-4037062 | None:intergenic | 30.0% | |
| GTTCATTTGATATGAAGAAC+CGG | - | chr5.3:4040046-4040065 | MS.gene072795:CDS | 30.0% | |
| TACTGCTATATTGTTGAGTT+TGG | - | chr5.3:4039119-4039138 | MS.gene072795:CDS | 30.0% | |
| TAGTTACGTTAACAAAAGAG+GGG | + | chr5.3:4037041-4037060 | None:intergenic | 30.0% | |
| TATACGCCTCAATTATGTTT+GGG | - | chr5.3:4041951-4041970 | MS.gene072795:CDS | 30.0% | |
| TATTGACAAAAATGGTACTC+CGG | - | chr5.3:4040352-4040371 | MS.gene072795:CDS | 30.0% | |
| TCATAAAGAATGACAATGAG+AGG | - | chr5.3:4037358-4037377 | MS.gene072795:intron | 30.0% | |
| TCTTATAAAGCAGACATAAC+AGG | - | chr5.3:4038538-4038557 | MS.gene072795:intron | 30.0% | |
| TTAATCTTCTATCGCTTTGT+AGG | - | chr5.3:4039615-4039634 | MS.gene072795:CDS | 30.0% | |
| TTCATTAATTGTATTCCGCT+AGG | + | chr5.3:4041247-4041266 | None:intergenic | 30.0% | |
| ! | AGTAATGGAAACAAAATCTC+GGG | + | chr5.3:4040701-4040720 | None:intergenic | 30.0% |
| ! | ATTCATATTGAAAGCGTGTT+AGG | - | chr5.3:4041595-4041614 | MS.gene072795:intron | 30.0% |
| ! | CAGTAATGGAAACAAAATCT+CGG | + | chr5.3:4040702-4040721 | None:intergenic | 30.0% |
| ! | CATTATTTGCTTGTTACGAA+CGG | + | chr5.3:4040743-4040762 | None:intergenic | 30.0% |
| ! | TCTTGATCTCATTTTCAACT+TGG | - | chr5.3:4039641-4039660 | MS.gene072795:CDS | 30.0% |
| !! | TATGAAAATTAGGAGCATCA+TGG | - | chr5.3:4040954-4040973 | MS.gene072795:intron | 30.0% |
| !! | TGTGTAATTCTAAAACTCCA+GGG | + | chr5.3:4038489-4038508 | None:intergenic | 30.0% |
| !!! | TATCTTGAGGTTTTAGCTAA+GGG | - | chr5.3:4039051-4039070 | MS.gene072795:intron | 30.0% |
| !!! | TTTTTTGGCATACTCAACAA+CGG | + | chr5.3:4040644-4040663 | None:intergenic | 30.0% |
| AAAATATTTCCCAGTGAAGG+TGG | - | chr5.3:4038616-4038635 | MS.gene072795:CDS | 35.0% | |
| AAATCCATTAAACGGCTACA+TGG | - | chr5.3:4036961-4036980 | MS.gene072795:CDS | 35.0% | |
| AACAAAAACGATCTGTGATG+TGG | - | chr5.3:4037240-4037259 | MS.gene072795:intron | 35.0% | |
| AACTGCTAATTCCATTGCAA+GGG | - | chr5.3:4040996-4041015 | MS.gene072795:intron | 35.0% | |
| AATTCCATGTAGCCGTTTAA+TGG | + | chr5.3:4036968-4036987 | None:intergenic | 35.0% | |
| ACCATGGAAGTTAGAAAAAC+TGG | + | chr5.3:4038718-4038737 | None:intergenic | 35.0% | |
| ACTTTATCTGCTTTCTGATC+CGG | + | chr5.3:4041057-4041076 | None:intergenic | 35.0% | |
| AGCGGTGCAAAAACAAATTA+GGG | - | chr5.3:4037763-4037782 | MS.gene072795:intron | 35.0% | |
| AGGAAAGGTGATACTGTTAT+CGG | - | chr5.3:4039315-4039334 | MS.gene072795:intron | 35.0% | |
| ATCGTGAAGATGCTTACTAT+TGG | - | chr5.3:4038781-4038800 | MS.gene072795:intron | 35.0% | |
| ATTGACAAAAATGGTACTCC+GGG | - | chr5.3:4040353-4040372 | MS.gene072795:CDS | 35.0% | |
| CAAAGCCAGAAATCTAATCT+TGG | - | chr5.3:4037707-4037726 | MS.gene072795:intron | 35.0% | |
| CAACAAGTTCATAGAATTCC+CGG | + | chr5.3:4040374-4040393 | None:intergenic | 35.0% | |
| CAATCGTCATGTATGATCAA+AGG | + | chr5.3:4042189-4042208 | None:intergenic | 35.0% | |
| CACAGAAAATCCATGATTCA+AGG | + | chr5.3:4039926-4039945 | None:intergenic | 35.0% | |
| CATTACTCATAGCCAAATCT+TGG | - | chr5.3:4038327-4038346 | MS.gene072795:CDS | 35.0% | |
| CGCTTCTGATTCTTGTAATA+TGG | - | chr5.3:4037854-4037873 | MS.gene072795:intron | 35.0% | |
| CGGCACAAAATGAATAAAAG+AGG | + | chr5.3:4037076-4037095 | None:intergenic | 35.0% | |
| CGTAACAAGCAAATAATGGT+CGG | - | chr5.3:4040745-4040764 | MS.gene072795:CDS | 35.0% | |
| CGTTCGTAACAAGCAAATAA+TGG | - | chr5.3:4040741-4040760 | MS.gene072795:CDS | 35.0% | |
| CTCAACAATATAGCAGTATC+AGG | + | chr5.3:4039117-4039136 | None:intergenic | 35.0% | |
| CTCAATTATGTTTGGGCTTT+GGG | - | chr5.3:4041958-4041977 | MS.gene072795:CDS | 35.0% | |
| CTGTGGAGAAATCCATTAAA+CGG | - | chr5.3:4036953-4036972 | MS.gene072795:CDS | 35.0% | |
| GAACACCAAGATTAGATTTC+TGG | + | chr5.3:4037715-4037734 | None:intergenic | 35.0% | |
| GAGTTTGATCATGGCATTAT+TGG | + | chr5.3:4038443-4038462 | None:intergenic | 35.0% | |
| GCAAATAATGGTCGGTAATA+AGG | - | chr5.3:4040753-4040772 | MS.gene072795:CDS | 35.0% | |
| GCTATATTGTTGAGTTTGGA+TGG | - | chr5.3:4039123-4039142 | MS.gene072795:CDS | 35.0% | |
| GTATACGCCTCAATTATGTT+TGG | - | chr5.3:4041950-4041969 | MS.gene072795:CDS | 35.0% | |
| GTTTGTAAACGATGGACATT+AGG | - | chr5.3:4037270-4037289 | MS.gene072795:intron | 35.0% | |
| TAATTGTATTCCGCTAGGAT+AGG | + | chr5.3:4041242-4041261 | None:intergenic | 35.0% | |
| TATTGGAGAGGTTATTCGTT+GGG | - | chr5.3:4038798-4038817 | MS.gene072795:intron | 35.0% | |
| TGGCTATGAGTAATGATGTT+TGG | + | chr5.3:4038322-4038341 | None:intergenic | 35.0% | |
| TGTACTAATGAAGAGCAACT+TGG | - | chr5.3:4041882-4041901 | MS.gene072795:intron | 35.0% | |
| TTCCAAATACTTTGTGCCTT+TGG | - | chr5.3:4039476-4039495 | MS.gene072795:CDS | 35.0% | |
| TTCTGTTGCTAAAGCTACTT+GGG | + | chr5.3:4038278-4038297 | None:intergenic | 35.0% | |
| TTTGTTTCCATTACTGGACA+TGG | - | chr5.3:4040706-4040725 | MS.gene072795:CDS | 35.0% | |
| ! | ATATTTTCCAGCTAAGAACC+AGG | + | chr5.3:4039671-4039690 | None:intergenic | 35.0% |
| ! | CATGGATTTTCTGTGAATGT+TGG | - | chr5.3:4039931-4039950 | MS.gene072795:CDS | 35.0% |
| ! | GATTTTCTGTGAATGTTGGT+TGG | - | chr5.3:4039935-4039954 | MS.gene072795:CDS | 35.0% |
| ! | GGAAGAAATTGATAGTAGGT+TGG | - | chr5.3:4039167-4039186 | MS.gene072795:CDS | 35.0% |
| ! | GTGAATGAGAGTATGATAAC+TGG | - | chr5.3:4039270-4039289 | MS.gene072795:CDS | 35.0% |
| ! | TACCAAAGGCACAAAGTATT+TGG | + | chr5.3:4039481-4039500 | None:intergenic | 35.0% |
| ! | TAGATTAGCTCCTTGAATCA+TGG | - | chr5.3:4039913-4039932 | MS.gene072795:CDS | 35.0% |
| ! | TCCAGTTTTTCTAACTTCCA+TGG | - | chr5.3:4038714-4038733 | MS.gene072795:intron | 35.0% |
| ! | TGTATAATGGCTTCGATTTG+AGG | - | chr5.3:4037334-4037353 | MS.gene072795:intron | 35.0% |
| ! | TTAGGGGTTCTTTAAGTTTG+AGG | + | chr5.3:4037590-4037609 | None:intergenic | 35.0% |
| ! | TTGTACTGTTCATGGACTAT+AGG | - | chr5.3:4040529-4040548 | MS.gene072795:CDS | 35.0% |
| !! | AAAATGGAGAAAGTGTTCCT+TGG | - | chr5.3:4040153-4040172 | MS.gene072795:CDS | 35.0% |
| !! | AGAAGGATAATGGGATTTCT+TGG | + | chr5.3:4041446-4041465 | None:intergenic | 35.0% |
| !! | CAGATCGTTTTTGTTACGTT+TGG | + | chr5.3:4037235-4037254 | None:intergenic | 35.0% |
| !! | CGAGATTTTGTTTCCATTAC+TGG | - | chr5.3:4040700-4040719 | MS.gene072795:CDS | 35.0% |
| !! | GCTTTGGGTTATAATTTGCT+TGG | - | chr5.3:4041973-4041992 | MS.gene072795:CDS | 35.0% |
| !! | GTGTGTAATTCTAAAACTCC+AGG | + | chr5.3:4038490-4038509 | None:intergenic | 35.0% |
| !! | TCTGTTAGGAAAGTATCTTG+AGG | - | chr5.3:4039038-4039057 | MS.gene072795:intron | 35.0% |
| !! | TGTGTTACTTGTACTGTTCA+TGG | - | chr5.3:4040521-4040540 | MS.gene072795:CDS | 35.0% |
| !!! | ATCTTGAGGTTTTAGCTAAG+GGG | - | chr5.3:4039052-4039071 | MS.gene072795:intron | 35.0% |
| !!! | GCTACTTCTAAGGTTTTTGA+AGG | - | chr5.3:4038973-4038992 | MS.gene072795:intron | 35.0% |
| !!! | GTATCTTGAGGTTTTAGCTA+AGG | - | chr5.3:4039050-4039069 | MS.gene072795:intron | 35.0% |
| !!! | TGCATTGTTTTTGACAAGAC+CGG | - | chr5.3:4040288-4040307 | MS.gene072795:CDS | 35.0% |
| !!! | TTCTTCTTTTTCAGGCTTCT+GGG | - | chr5.3:4041746-4041765 | MS.gene072795:intron | 35.0% |
| !!! | TTTCTTCTTTTTCAGGCTTC+TGG | - | chr5.3:4041745-4041764 | MS.gene072795:intron | 35.0% |
| AAAAGAACTCCAGCTGCTAT+TGG | + | chr5.3:4042003-4042022 | None:intergenic | 40.0% | |
| AAAATCGATCTCCATGTGGA+AGG | - | chr5.3:4038409-4038428 | MS.gene072795:intron | 40.0% | |
| AAAGGTGATACTGTTATCGG+TGG | - | chr5.3:4039318-4039337 | MS.gene072795:intron | 40.0% | |
| AAATGCGATCAGCAAACTTC+TGG | + | chr5.3:4039458-4039477 | None:intergenic | 40.0% | |
| AAGACCGGTACTCTTACTAT+TGG | - | chr5.3:4040303-4040322 | MS.gene072795:CDS | 40.0% | |
| AAGATGAAGAGAACCCTTCT+TGG | - | chr5.3:4040668-4040687 | MS.gene072795:CDS | 40.0% | |
| AAGCAAAATCGATCTCCATG+TGG | - | chr5.3:4038405-4038424 | MS.gene072795:intron | 40.0% | |
| AATTCCAACTTCCCTTGCAA+TGG | + | chr5.3:4041010-4041029 | None:intergenic | 40.0% | |
| AATTCCATTGCAAGGGAAGT+TGG | - | chr5.3:4041003-4041022 | MS.gene072795:intron | 40.0% | |
| ACAAACACCAGAGATGATAG+TGG | + | chr5.3:4041670-4041689 | None:intergenic | 40.0% | |
| ACTAATGAAGAGCAACTTGG+AGG | - | chr5.3:4041885-4041904 | MS.gene072795:intron | 40.0% | |
| AGACCGGTACTCTTACTATT+GGG | - | chr5.3:4040304-4040323 | MS.gene072795:CDS | 40.0% | |
| ATATCTGATCCACTGAAACC+AGG | - | chr5.3:4040901-4040920 | MS.gene072795:intron | 40.0% | |
| ATCTTCGACGAGTTTGATCA+TGG | + | chr5.3:4038452-4038471 | None:intergenic | 40.0% | |
| CAAGCAAAACGCAACAATGT+TGG | + | chr5.3:4037996-4038015 | None:intergenic | 40.0% | |
| CAGCGGTGCAAAAACAAATT+AGG | - | chr5.3:4037762-4037781 | MS.gene072795:intron | 40.0% | |
| CAGTAACAATCCTATCCTAG+CGG | - | chr5.3:4041229-4041248 | MS.gene072795:intron | 40.0% | |
| CATCTACAGCTTCCAAGATT+TGG | + | chr5.3:4038342-4038361 | None:intergenic | 40.0% | |
| CATTACTGGACATGGAGTAA+AGG | - | chr5.3:4040714-4040733 | MS.gene072795:CDS | 40.0% | |
| CCAAAGCCCAAACATAATTG+AGG | + | chr5.3:4041960-4041979 | None:intergenic | 40.0% | |
| CCTCAATTATGTTTGGGCTT+TGG | - | chr5.3:4041957-4041976 | MS.gene072795:CDS | 40.0% | |
| CTATAAAGGCTAGGAACAGA+AGG | + | chr5.3:4041463-4041482 | None:intergenic | 40.0% | |
| CTATAAATGGGGAAGTAGCT+GGG | - | chr5.3:4040869-4040888 | MS.gene072795:intron | 40.0% | |
| CTATTGGAGAGGTTATTCGT+TGG | - | chr5.3:4038797-4038816 | MS.gene072795:intron | 40.0% | |
| CTCATCAAAGGAAGAGTTCA+AGG | - | chr5.3:4037302-4037321 | MS.gene072795:intron | 40.0% | |
| CTTCTGTTGCTAAAGCTACT+TGG | + | chr5.3:4038279-4038298 | None:intergenic | 40.0% | |
| CTTTACTCCATGTCCAGTAA+TGG | + | chr5.3:4040716-4040735 | None:intergenic | 40.0% | |
| GAACTGCTAATTCCATTGCA+AGG | - | chr5.3:4040995-4041014 | MS.gene072795:intron | 40.0% | |
| GAAGATGCTTACTATTGGAG+AGG | - | chr5.3:4038786-4038805 | MS.gene072795:intron | 40.0% | |
| GAATGGTGTCTTGCATGTTA+AGG | - | chr5.3:4039353-4039372 | MS.gene072795:intron | 40.0% | |
| GAGAAAAATAACTGTGCGGT+TGG | + | chr5.3:4041408-4041427 | None:intergenic | 40.0% | |
| GCGAAAATATTTCCCAGTGA+AGG | - | chr5.3:4038613-4038632 | MS.gene072795:CDS | 40.0% | |
| GCGGTGCAAAAACAAATTAG+GGG | - | chr5.3:4037764-4037783 | MS.gene072795:intron | 40.0% | |
| GCTAGGAACAGAAGGATAAT+GGG | + | chr5.3:4041455-4041474 | None:intergenic | 40.0% | |
| GCTTATAAATCATTGCGTCG+TGG | - | chr5.3:4038871-4038890 | MS.gene072795:intron | 40.0% | |
| GGTGGAACTTTGAATGAGAA+TGG | - | chr5.3:4039336-4039355 | MS.gene072795:intron | 40.0% | |
| GTGCAAAAGTTGCTTCTGAT+GGG | - | chr5.3:4039223-4039242 | MS.gene072795:CDS | 40.0% | |
| GTGTTGAGTATTCGTGTTAG+TGG | - | chr5.3:4037684-4037703 | MS.gene072795:intron | 40.0% | |
| TATAAATGGGGAAGTAGCTG+GGG | - | chr5.3:4040870-4040889 | MS.gene072795:intron | 40.0% | |
| TATGCTGCAACAAGTATCCA+AGG | + | chr5.3:4040173-4040192 | None:intergenic | 40.0% | |
| TCTATAAATGGGGAAGTAGC+TGG | - | chr5.3:4040868-4040887 | MS.gene072795:intron | 40.0% | |
| TTCAGGAGATGATAGTTGTC+AGG | + | chr5.3:4041183-4041202 | None:intergenic | 40.0% | |
| TTCGTTTCGAAAACAGGCTA+AGG | + | chr5.3:4036773-4036792 | None:intergenic | 40.0% | |
| ! | AACTGTTGTTTGTCCATCTC+AGG | - | chr5.3:4040591-4040610 | MS.gene072795:CDS | 40.0% |
| ! | ACACCAGTGCAGTTCATTTT+CGG | - | chr5.3:4038829-4038848 | MS.gene072795:intron | 40.0% |
| ! | ACTTGTTGAGTCTGCTCAAA+TGG | - | chr5.3:4039419-4039438 | MS.gene072795:intron | 40.0% |
| ! | AGGGTGTATTGATCAAAGGA+GGG | - | chr5.3:4039845-4039864 | MS.gene072795:CDS | 40.0% |
| ! | CTTCCCAATAGTAAGAGTAC+CGG | + | chr5.3:4040310-4040329 | None:intergenic | 40.0% |
| ! | GCAGTTTGGAATTTCTGTCA+TGG | - | chr5.3:4039747-4039766 | MS.gene072795:CDS | 40.0% |
| ! | GGGAGGAAGAAATTGATAGT+AGG | - | chr5.3:4039163-4039182 | MS.gene072795:CDS | 40.0% |
| ! | GTTTGTGACTGTCTTGTTGT+AGG | - | chr5.3:4040260-4040279 | MS.gene072795:CDS | 40.0% |
| ! | TATTTGCTTGTTACGAACGG+TGG | + | chr5.3:4040740-4040759 | None:intergenic | 40.0% |
| ! | TCCTGTTTGAGCCATGTTTT+CGG | + | chr5.3:4040839-4040858 | None:intergenic | 40.0% |
| ! | TCTCAGGGTGTATTGATCAA+AGG | - | chr5.3:4039841-4039860 | MS.gene072795:CDS | 40.0% |
| ! | TGAGAGTATGATAACTGGTG+AGG | - | chr5.3:4039275-4039294 | MS.gene072795:CDS | 40.0% |
| ! | TTAGCCTGTTTTCGAAACGA+AGG | - | chr5.3:4036772-4036791 | MS.gene072795:CDS | 40.0% |
| ! | TTCGGGTGGCGATTTTATAT+TGG | - | chr5.3:4038847-4038866 | MS.gene072795:intron | 40.0% |
| ! | TTTTCCCTTCTACAGGCTTT+CGG | - | chr5.3:4042019-4042038 | MS.gene072795:CDS | 40.0% |
| !! | AGCTTTGGAAAGTGCACATA+AGG | - | chr5.3:4039870-4039889 | MS.gene072795:CDS | 40.0% |
| !! | AGTAGCTTTAGCAACAGAAG+AGG | - | chr5.3:4038279-4038298 | MS.gene072795:CDS | 40.0% |
| !! | GACAAATGGACTAATTGGCA+TGG | + | chr5.3:4039982-4040001 | None:intergenic | 40.0% |
| !! | TCAGCCTTTTAGAAGGAGAT+GGG | + | chr5.3:4040421-4040440 | None:intergenic | 40.0% |
| !! | TTCTGATGGGCTTGTTGTTT+GGG | - | chr5.3:4039236-4039255 | MS.gene072795:CDS | 40.0% |
| !!! | CTAATTTGTTTTTGCACCGC+TGG | + | chr5.3:4037764-4037783 | None:intergenic | 40.0% |
| !!! | TTTTAGAGCTGATTCAACCG+CGG | + | chr5.3:4038233-4038252 | None:intergenic | 40.0% |
| AACCATAACAGCAGTAGGTG+TGG | + | chr5.3:4039803-4039822 | None:intergenic | 45.0% | |
| AAGACGGTATCCAGGATTTC+GGG | + | chr5.3:4039702-4039721 | None:intergenic | 45.0% | |
| AAGCAGAGCAAGTCATTCCA+TGG | + | chr5.3:4036924-4036943 | None:intergenic | 45.0% | |
| AAGCTGAACAGCCTTGACAT+AGG | - | chr5.3:4042135-4042154 | MS.gene072795:CDS | 45.0% | |
| ACACCTACTGCTGTTATGGT+TGG | - | chr5.3:4039802-4039821 | MS.gene072795:CDS | 45.0% | |
| AGCTGAACAGCCTTGACATA+GGG | - | chr5.3:4042136-4042155 | MS.gene072795:CDS | 45.0% | |
| AGTAGATCTTCAGCAACAGC+AGG | + | chr5.3:4040808-4040827 | None:intergenic | 45.0% | |
| ATAGGAGGAGGCTATTTGTG+AGG | - | chr5.3:4038096-4038115 | MS.gene072795:CDS | 45.0% | |
| ATCATGCTTACCCGAAATCC+TGG | - | chr5.3:4039689-4039708 | MS.gene072795:CDS | 45.0% | |
| ATCTCTTCTTCCACCTTCAC+TGG | + | chr5.3:4038629-4038648 | None:intergenic | 45.0% | |
| ATGGCGAAGGGAATGTTGTT+GGG | - | chr5.3:4039142-4039161 | MS.gene072795:CDS | 45.0% | |
| ATTGAAGGGTAGTGAGATCG+AGG | + | chr5.3:4036814-4036833 | None:intergenic | 45.0% | |
| CAGTGAACATCCACTAGCTA+AGG | - | chr5.3:4040618-4040637 | MS.gene072795:CDS | 45.0% | |
| CATGTTAAGGCAACGAAGGT+TGG | - | chr5.3:4039366-4039385 | MS.gene072795:intron | 45.0% | |
| CCATCCTTCGTTTCGAAAAC+AGG | + | chr5.3:4036779-4036798 | None:intergenic | 45.0% | |
| CTTGCATGTTAAGGCAACGA+AGG | - | chr5.3:4039362-4039381 | MS.gene072795:intron | 45.0% | |
| GAAACAAAATCTCGGGCTTC+TGG | + | chr5.3:4040694-4040713 | None:intergenic | 45.0% | |
| GAAATCACTTCTTGAGCACC+TGG | + | chr5.3:4040922-4040941 | None:intergenic | 45.0% | |
| GAAGACGGTATCCAGGATTT+CGG | + | chr5.3:4039703-4039722 | None:intergenic | 45.0% | |
| GCAAACAACACTGACAGAAG+AGG | + | chr5.3:4042079-4042098 | None:intergenic | 45.0% | |
| GGCTAGGAACAGAAGGATAA+TGG | + | chr5.3:4041456-4041475 | None:intergenic | 45.0% | |
| GGTGCAAAAGTTGCTTCTGA+TGG | - | chr5.3:4039222-4039241 | MS.gene072795:CDS | 45.0% | |
| TCAAAGCTGTCCATGGAAGA+CGG | + | chr5.3:4039718-4039737 | None:intergenic | 45.0% | |
| TCAAGGCTGTTCAGCTTCTT+GGG | + | chr5.3:4042132-4042151 | None:intergenic | 45.0% | |
| TCAATATGCCCCCTATGTCA+AGG | + | chr5.3:4042149-4042168 | None:intergenic | 45.0% | |
| TCACCTTTCCTCTTAGACAC+AGG | + | chr5.3:4039306-4039325 | None:intergenic | 45.0% | |
| TCTCTTCTTCCACCTTCACT+GGG | + | chr5.3:4038628-4038647 | None:intergenic | 45.0% | |
| TGCTCTATAGTTGGAGACGT+TGG | - | chr5.3:4037948-4037967 | MS.gene072795:CDS | 45.0% | |
| TGGCTAAACCCAAAGCACAA+GGG | + | chr5.3:4039783-4039802 | None:intergenic | 45.0% | |
| TGTTCACTGTTCACCTGAGA+TGG | + | chr5.3:4040607-4040626 | None:intergenic | 45.0% | |
| TGTTGAGTTTGGATGGCGAA+GGG | - | chr5.3:4039130-4039149 | MS.gene072795:CDS | 45.0% | |
| TTGGAAGCTGTAGATGAAGC+TGG | - | chr5.3:4038346-4038365 | MS.gene072795:intron | 45.0% | |
| TTGTTGAGTTTGGATGGCGA+AGG | - | chr5.3:4039129-4039148 | MS.gene072795:CDS | 45.0% | |
| ! | ACTTGCTGAAGCCGAAAACA+TGG | - | chr5.3:4040825-4040844 | MS.gene072795:CDS | 45.0% |
| ! | ATGGATGTGCTGATAGCACT+GGG | - | chr5.3:4038904-4038923 | MS.gene072795:intron | 45.0% |
| ! | CACCAGTGCAGTTCATTTTC+GGG | - | chr5.3:4038830-4038849 | MS.gene072795:intron | 45.0% |
| ! | CAGGGTGTATTGATCAAAGG+AGG | - | chr5.3:4039844-4039863 | MS.gene072795:CDS | 45.0% |
| ! | CCTGTTTTCGAAACGAAGGA+TGG | - | chr5.3:4036776-4036795 | MS.gene072795:CDS | 45.0% |
| ! | GGAGTTCTTTTCCCTTCTAC+AGG | - | chr5.3:4042012-4042031 | MS.gene072795:CDS | 45.0% |
| ! | GTTCTTGACCTTTTGTCCAG+CGG | - | chr5.3:4037745-4037764 | MS.gene072795:intron | 45.0% |
| ! | TATGGATGTGCTGATAGCAC+TGG | - | chr5.3:4038903-4038922 | MS.gene072795:intron | 45.0% |
| ! | TCAGAAGCAACTTTTGCACC+CGG | + | chr5.3:4039222-4039241 | None:intergenic | 45.0% |
| ! | TGGCACAGACATTGCTATTG+AGG | - | chr5.3:4041849-4041868 | MS.gene072795:intron | 45.0% |
| ! | TTTGAGCTTGCTCTGCAGTT+TGG | - | chr5.3:4039733-4039752 | MS.gene072795:CDS | 45.0% |
| ! | TTTGAGGGCTGCTACTTCTA+AGG | - | chr5.3:4038963-4038982 | MS.gene072795:intron | 45.0% |
| ! | TTTTTGCACCGCTGGACAAA+AGG | + | chr5.3:4037756-4037775 | None:intergenic | 45.0% |
| !! | AGCCTTTTAGAAGGAGATGG+GGG | + | chr5.3:4040419-4040438 | None:intergenic | 45.0% |
| !! | ATTAGGAGCATCATGGTGAC+TGG | - | chr5.3:4040961-4040980 | MS.gene072795:intron | 45.0% |
| !! | CAGCCTTTTAGAAGGAGATG+GGG | + | chr5.3:4040420-4040439 | None:intergenic | 45.0% |
| !! | CTCAGCCTTTTAGAAGGAGA+TGG | + | chr5.3:4040422-4040441 | None:intergenic | 45.0% |
| !! | CTTCTGATGGGCTTGTTGTT+TGG | - | chr5.3:4039235-4039254 | MS.gene072795:CDS | 45.0% |
| !! | TCTGATGGGCTTGTTGTTTG+GGG | - | chr5.3:4039237-4039256 | MS.gene072795:CDS | 45.0% |
| !! | TGGGGTAAGAAGGCATTGAA+GGG | + | chr5.3:4036828-4036847 | None:intergenic | 45.0% |
| !! | TTGGGGTAAGAAGGCATTGA+AGG | + | chr5.3:4036829-4036848 | None:intergenic | 45.0% |
| !! | TTTTCAGGCTTCTGGGTACA+CGG | - | chr5.3:4041753-4041772 | MS.gene072795:intron | 45.0% |
| !!! | CATTTTCAACTTGGCTTGCC+TGG | - | chr5.3:4039650-4039669 | MS.gene072795:CDS | 45.0% |
| !!! | TTATTTAATTTTATTTTCAT+AGG | - | chr5.3:4038078-4038097 | MS.gene072795:CDS | 5.0% |
| AAAGCCCTTCCTGGAGTTGT+TGG | - | chr5.3:4038250-4038269 | MS.gene072795:CDS | 50.0% | |
| AAGAGGGGTGAAAGATGACG+CGG | + | chr5.3:4037026-4037045 | None:intergenic | 50.0% | |
| AAGCAGACATAACAGGGCCA+AGG | - | chr5.3:4038545-4038564 | MS.gene072795:intron | 50.0% | |
| ACATCTGCTGCTACAAGTGC+AGG | + | chr5.3:4041811-4041830 | None:intergenic | 50.0% | |
| ACTGCTGTTATGGTTGGCAC+TGG | - | chr5.3:4039808-4039827 | MS.gene072795:CDS | 50.0% | |
| AGCAAGCTCAAAGCTGTCCA+TGG | + | chr5.3:4039725-4039744 | None:intergenic | 50.0% | |
| AGCAGACATAACAGGGCCAA+GGG | - | chr5.3:4038546-4038565 | MS.gene072795:intron | 50.0% | |
| AGCCACACCTACTGCTGTTA+TGG | - | chr5.3:4039798-4039817 | MS.gene072795:CDS | 50.0% | |
| ATCCTGGATACCGTCTTCCA+TGG | - | chr5.3:4039705-4039724 | MS.gene072795:CDS | 50.0% | |
| ATGGAGGTTTCGAAGGTCAC+GGG | - | chr5.3:4036886-4036905 | MS.gene072795:CDS | 50.0% | |
| ATGGTGACTGGAGACAACTG+GGG | - | chr5.3:4040973-4040992 | MS.gene072795:intron | 50.0% | |
| ATTGCCTGCCCTTGTGCTTT+GGG | - | chr5.3:4039772-4039791 | MS.gene072795:CDS | 50.0% | |
| CAAGAATCAGAAGCGGAGCT+AGG | + | chr5.3:4037849-4037868 | None:intergenic | 50.0% | |
| CACCCGAAAATGAACTGCAC+TGG | + | chr5.3:4038835-4038854 | None:intergenic | 50.0% | |
| CATGGAGGTTTCGAAGGTCA+CGG | - | chr5.3:4036885-4036904 | MS.gene072795:CDS | 50.0% | |
| CATGGTGACTGGAGACAACT+GGG | - | chr5.3:4040972-4040991 | MS.gene072795:intron | 50.0% | |
| CGATCAGCAAACTTCTGGAC+AGG | + | chr5.3:4039453-4039472 | None:intergenic | 50.0% | |
| CGTCCTGTGTCTAAGAGGAA+AGG | - | chr5.3:4039300-4039319 | MS.gene072795:CDS | 50.0% | |
| CTGAACAGCCTTGACATAGG+GGG | - | chr5.3:4042138-4042157 | MS.gene072795:CDS | 50.0% | |
| CTTGGCATTCCAATAGCAGC+TGG | - | chr5.3:4041991-4042010 | MS.gene072795:CDS | 50.0% | |
| GACAATGAGAGGGTCAGAGT+TGG | - | chr5.3:4037369-4037388 | MS.gene072795:intron | 50.0% | |
| GATCAAAGGAGGGCAAGCTT+TGG | - | chr5.3:4039855-4039874 | MS.gene072795:CDS | 50.0% | |
| GATGGCGAAGGGAATGTTGT+TGG | - | chr5.3:4039141-4039160 | MS.gene072795:CDS | 50.0% | |
| GATTCTCTTCGATCACTCCC+TGG | - | chr5.3:4038469-4038488 | MS.gene072795:intron | 50.0% | |
| GCAACCGAAAGCCTGTAGAA+GGG | + | chr5.3:4042026-4042045 | None:intergenic | 50.0% | |
| GCACTTGTAGCAGCAGATGT+GGG | - | chr5.3:4041811-4041830 | MS.gene072795:intron | 50.0% | |
| GCAGATGTGGGAATGGCAAT+AGG | - | chr5.3:4041823-4041842 | MS.gene072795:intron | 50.0% | |
| GCCGAAAACATGGCTCAAAC+AGG | - | chr5.3:4040835-4040854 | MS.gene072795:CDS | 50.0% | |
| GCTGAACAGCCTTGACATAG+GGG | - | chr5.3:4042137-4042156 | MS.gene072795:CDS | 50.0% | |
| GGTCGGTAATAAGGGCTTGA+TGG | - | chr5.3:4040762-4040781 | MS.gene072795:CDS | 50.0% | |
| GTCAAGGCTGTTCAGCTTCT+TGG | + | chr5.3:4042133-4042152 | None:intergenic | 50.0% | |
| GTGCCAACCATAACAGCAGT+AGG | + | chr5.3:4039808-4039827 | None:intergenic | 50.0% | |
| GTGGCTAAACCCAAAGCACA+AGG | + | chr5.3:4039784-4039803 | None:intergenic | 50.0% | |
| GTTGGAGACGTTGGCATACT+AGG | - | chr5.3:4037957-4037976 | MS.gene072795:CDS | 50.0% | |
| TAAACCCAAAGCACAAGGGC+AGG | + | chr5.3:4039779-4039798 | None:intergenic | 50.0% | |
| TATTGCCTGCCCTTGTGCTT+TGG | - | chr5.3:4039771-4039790 | MS.gene072795:CDS | 50.0% | |
| TCAACAACGGCCTTAGCTAG+TGG | + | chr5.3:4040631-4040650 | None:intergenic | 50.0% | |
| TCATGGTGACTGGAGACAAC+TGG | - | chr5.3:4040971-4040990 | MS.gene072795:intron | 50.0% | |
| TCTTGAGCACCTGGTTTCAG+TGG | + | chr5.3:4040913-4040932 | None:intergenic | 50.0% | |
| TGAAGACGCTGGATTTGACG+CGG | - | chr5.3:4038123-4038142 | MS.gene072795:CDS | 50.0% | |
| TGCACTTGTAGCAGCAGATG+TGG | - | chr5.3:4041810-4041829 | MS.gene072795:intron | 50.0% | |
| TGCCCCCATCTCCTTCTAAA+AGG | - | chr5.3:4040414-4040433 | MS.gene072795:CDS | 50.0% | |
| TGGCGAAGGGAATGTTGTTG+GGG | - | chr5.3:4039143-4039162 | MS.gene072795:CDS | 50.0% | |
| TGTAGCAGCAGATGTGGGAA+TGG | - | chr5.3:4041816-4041835 | MS.gene072795:intron | 50.0% | |
| TGTGAGGCAATTGAAGACGC+TGG | - | chr5.3:4038112-4038131 | MS.gene072795:CDS | 50.0% | |
| TTCGTCCATGGAGGTTTCGA+AGG | - | chr5.3:4036879-4036898 | MS.gene072795:CDS | 50.0% | |
| TTCTTACCCCAAAGACGAGG+CGG | - | chr5.3:4036837-4036856 | MS.gene072795:CDS | 50.0% | |
| ! | ACGGGACTTTTCTCTGTCCA+TGG | - | chr5.3:4036904-4036923 | MS.gene072795:CDS | 50.0% |
| ! | CTGAGGCTCAGCCTTTTAGA+AGG | + | chr5.3:4040428-4040447 | None:intergenic | 50.0% |
| ! | GCGTCGTGGTTCTGCTAATA+TGG | - | chr5.3:4038885-4038904 | MS.gene072795:intron | 50.0% |
| ! | GTTATGGTTGGCACTGGAGT+TGG | - | chr5.3:4039814-4039833 | MS.gene072795:CDS | 50.0% |
| !! | ACTGGAGTTGGTGCATCTCA+GGG | - | chr5.3:4039826-4039845 | MS.gene072795:CDS | 50.0% |
| !! | CAGTGCAGTTCATTTTCGGG+TGG | - | chr5.3:4038833-4038852 | MS.gene072795:intron | 50.0% |
| !! | TCAGCTCTAAAAGCCCTTCC+TGG | - | chr5.3:4038241-4038260 | MS.gene072795:CDS | 50.0% |
| !! | TGAACTTGTTGCTGCAGCTG+AGG | - | chr5.3:4040383-4040402 | MS.gene072795:CDS | 50.0% |
| AAACCTCCATGGACGAAGCG+GGG | + | chr5.3:4036876-4036895 | None:intergenic | 55.0% | |
| ACTTGGGCTCCAACAACTCC+AGG | + | chr5.3:4038262-4038281 | None:intergenic | 55.0% | |
| AGAGGGGTGAAAGATGACGC+GGG | + | chr5.3:4037025-4037044 | None:intergenic | 55.0% | |
| AGGCACGTCCTGTGTCTAAG+AGG | - | chr5.3:4039295-4039314 | MS.gene072795:CDS | 55.0% | |
| ATAGCAGCTCCAGCGATCCA+AGG | + | chr5.3:4042051-4042070 | None:intergenic | 55.0% | |
| CGAAACCTCCATGGACGAAG+CGG | + | chr5.3:4036878-4036897 | None:intergenic | 55.0% | |
| CGAAGGGAATGTTGTTGGGG+AGG | - | chr5.3:4039146-4039165 | MS.gene072795:CDS | 55.0% | |
| CGTGACCTTCGAAACCTCCA+TGG | + | chr5.3:4036887-4036906 | None:intergenic | 55.0% | |
| GAAACCTCCATGGACGAAGC+GGG | + | chr5.3:4036877-4036896 | None:intergenic | 55.0% | |
| GCCTTCTTACCCCAAAGACG+AGG | - | chr5.3:4036834-4036853 | MS.gene072795:CDS | 55.0% | |
| GGCAACCGAAAGCCTGTAGA+AGG | + | chr5.3:4042027-4042046 | None:intergenic | 55.0% | |
| GGCTCCAACAACTCCAGGAA+GGG | + | chr5.3:4038257-4038276 | None:intergenic | 55.0% | |
| GTCCATGGAAGACGGTATCC+AGG | + | chr5.3:4039710-4039729 | None:intergenic | 55.0% | |
| GTGGGAATGGCAATAGGTGC+TGG | - | chr5.3:4041829-4041848 | MS.gene072795:intron | 55.0% | |
| TCTTACCCCAAAGACGAGGC+GGG | - | chr5.3:4036838-4036857 | MS.gene072795:CDS | 55.0% | |
| TGGTGAGATCGCCTTCCACA+TGG | + | chr5.3:4038423-4038442 | None:intergenic | 55.0% | |
| TTCTGGGTACACGGTGGCTA+TGG | - | chr5.3:4041762-4041781 | MS.gene072795:intron | 55.0% | |
| TTGGATCGCTGGAGCTGCTA+TGG | - | chr5.3:4042050-4042069 | MS.gene072795:CDS | 55.0% | |
| ! | GAGGGTCAGAGTTGGTTGCA+AGG | - | chr5.3:4037377-4037396 | MS.gene072795:intron | 55.0% |
| ! | TAGAGCTGATTCAACCGCGG+TGG | + | chr5.3:4038230-4038249 | None:intergenic | 55.0% |
| ! | TGGCTTGCCTGGTTCTTAGC+TGG | - | chr5.3:4039661-4039680 | MS.gene072795:CDS | 55.0% |
| !! | ATGACTTGCTCTGCTTGCGC+TGG | - | chr5.3:4036928-4036947 | MS.gene072795:CDS | 55.0% |
| !! | CACTGGAGTTGGTGCATCTC+AGG | - | chr5.3:4039825-4039844 | MS.gene072795:CDS | 55.0% |
| !! | GCCTCGTCTTTGGGGTAAGA+AGG | + | chr5.3:4036838-4036857 | None:intergenic | 55.0% |
| !! | GTCGGTGCCACTATCATCTC+TGG | - | chr5.3:4041660-4041679 | MS.gene072795:intron | 55.0% |
| ATGCACGTCGTGTTCCACCG+CGG | - | chr5.3:4038213-4038232 | MS.gene072795:CDS | 60.0% | |
| CTCGGGCTTCTGGCCAAGAA+GGG | + | chr5.3:4040684-4040703 | None:intergenic | 60.0% | |
| CTCTGCTTGCGCTGGATCTG+TGG | - | chr5.3:4036936-4036955 | MS.gene072795:CDS | 60.0% | |
| CTTACCCCAAAGACGAGGCG+GGG | - | chr5.3:4036839-4036858 | MS.gene072795:CDS | 60.0% | |
| GGGCTCCAACAACTCCAGGA+AGG | + | chr5.3:4038258-4038277 | None:intergenic | 60.0% | |
| GGGTACACGGTGGCTATGGT+CGG | - | chr5.3:4041766-4041785 | MS.gene072795:intron | 60.0% | |
| GGTGAAAGATGACGCGGGCA+CGG | + | chr5.3:4037020-4037039 | None:intergenic | 60.0% | |
| TCAGGCTTCTGGGTACACGG+TGG | - | chr5.3:4041756-4041775 | MS.gene072795:intron | 60.0% | |
| TCTCGGGCTTCTGGCCAAGA+AGG | + | chr5.3:4040685-4040704 | None:intergenic | 60.0% | |
| ACGGTGGCTATGGTCGGCGA+CGG | - | chr5.3:4041772-4041791 | MS.gene072795:intron | 65.0% | |
| ACTGGTCCCCGCCTCGTCTT+TGG | + | chr5.3:4036848-4036867 | None:intergenic | 65.0% | |
| CAGGCTTTCGGTTGCCGCCT+TGG | - | chr5.3:4042031-4042050 | MS.gene072795:CDS | 65.0% | |
| CTGGTCCCCGCCTCGTCTTT+GGG | + | chr5.3:4036847-4036866 | None:intergenic | 65.0% | |
| GCAGCTCCAGCGATCCAAGG+CGG | + | chr5.3:4042048-4042067 | None:intergenic | 65.0% | |
| TGGTCCCCGCCTCGTCTTTG+GGG | + | chr5.3:4036846-4036865 | None:intergenic | 65.0% | |
| CGGTTGCCGCCTTGGATCGC+TGG | - | chr5.3:4042039-4042058 | MS.gene072795:CDS | 70.0% | |
| CTCCATGGACGAAGCGGGGC+CGG | + | chr5.3:4036872-4036891 | None:intergenic | 70.0% | |
| GACGAGGCGGGGACCAGTAC+CGG | - | chr5.3:4036850-4036869 | MS.gene072795:CDS | 70.0% | |
| TACCGGCCCCGCTTCGTCCA+TGG | - | chr5.3:4036867-4036886 | MS.gene072795:CDS | 70.0% | |
| CGGCCCCGCTTCGTCCATGG+AGG | - | chr5.3:4036870-4036889 | MS.gene072795:CDS | 75.0% | |
| GGACGAAGCGGGGCCGGTAC+TGG | + | chr5.3:4036866-4036885 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 4036754 | 4042209 | 4036754 | ID=MS.gene072795 |
| chr5.3 | mRNA | 4036754 | 4042209 | 4036754 | ID=MS.gene072795.t1;Parent=MS.gene072795 |
| chr5.3 | exon | 4041910 | 4042209 | 4041910 | ID=MS.gene072795.t1.exon1;Parent=MS.gene072795.t1 |
| chr5.3 | CDS | 4041910 | 4042209 | 4041910 | ID=cds.MS.gene072795.t1;Parent=MS.gene072795.t1 |
| chr5.3 | exon | 4039466 | 4040863 | 4039466 | ID=MS.gene072795.t1.exon2;Parent=MS.gene072795.t1 |
| chr5.3 | CDS | 4039466 | 4040863 | 4039466 | ID=cds.MS.gene072795.t1;Parent=MS.gene072795.t1 |
| chr5.3 | exon | 4039072 | 4039326 | 4039072 | ID=MS.gene072795.t1.exon3;Parent=MS.gene072795.t1 |
| chr5.3 | CDS | 4039072 | 4039326 | 4039072 | ID=cds.MS.gene072795.t1;Parent=MS.gene072795.t1 |
| chr5.3 | exon | 4038559 | 4038681 | 4038559 | ID=MS.gene072795.t1.exon4;Parent=MS.gene072795.t1 |
| chr5.3 | CDS | 4038559 | 4038681 | 4038559 | ID=cds.MS.gene072795.t1;Parent=MS.gene072795.t1 |
| chr5.3 | exon | 4037874 | 4038350 | 4037874 | ID=MS.gene072795.t1.exon5;Parent=MS.gene072795.t1 |
| chr5.3 | CDS | 4037874 | 4038350 | 4037874 | ID=cds.MS.gene072795.t1;Parent=MS.gene072795.t1 |
| chr5.3 | exon | 4036754 | 4037203 | 4036754 | ID=MS.gene072795.t1.exon6;Parent=MS.gene072795.t1 |
| chr5.3 | CDS | 4036754 | 4037203 | 4036754 | ID=cds.MS.gene072795.t1;Parent=MS.gene072795.t1 |
| Gene Sequence |
| Protein sequence |
