AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene36515

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36515.t1 MTR_4g094695 99.294 992 7 0 1 992 1 992 0.0 2002
MS.gene36515.t1 MTR_2g035840 81.400 1000 163 6 5 991 8 997 0.0 1617
MS.gene36515.t1 MTR_5g010420 48.791 951 458 9 45 989 52 979 0.0 880
MS.gene36515.t1 MTR_5g010420 37.500 96 50 1 12 107 107 192 4.75e-11 67.4
MS.gene36515.t1 MTR_5g010420 27.632 152 102 3 109 255 34 182 4.95e-11 67.4
MS.gene36515.t1 MTR_8g079250 47.208 949 478 8 45 989 59 988 0.0 853
MS.gene36515.t1 MTR_8g079250 30.675 163 96 4 108 255 30 190 1.03e-13 76.3
MS.gene36515.t1 MTR_8g012390 47.071 973 478 13 19 981 6 951 0.0 798
MS.gene36515.t1 MTR_8g079250 43.329 817 440 8 45 857 59 856 0.0 655
MS.gene36515.t1 MTR_8g079250 30.675 163 96 4 108 255 30 190 1.05e-13 76.3
MS.gene36515.t1 MTR_8g012390 43.042 848 448 12 19 857 6 827 0.0 629
MS.gene36515.t1 MTR_8g079250 43.711 636 349 5 45 676 59 689 3.07e-175 527
MS.gene36515.t1 MTR_8g079250 30.675 163 96 4 108 255 30 190 9.70e-14 75.9
MS.gene36515.t1 MTR_3g105190 35.634 710 393 14 302 981 210 885 4.22e-121 392
MS.gene36515.t1 MTR_4g094232 37.926 675 360 13 340 990 285 924 7.69e-121 392
MS.gene36515.t1 MTR_3g105190 33.727 593 331 13 302 866 210 768 1.66e-84 289
MS.gene36515.t1 MTR_2g036380 28.418 746 433 19 203 940 12 664 6.76e-76 266
MS.gene36515.t1 MTR_2g036380 30.660 636 362 17 320 940 3 574 2.50e-75 263
MS.gene36515.t1 MTR_2g036380 33.811 488 278 13 460 940 32 481 3.12e-72 252
MS.gene36515.t1 MTR_2g036380 33.811 488 278 13 460 940 63 512 7.75e-72 252
MS.gene36515.t1 MTR_4g127580 27.577 747 418 23 203 930 17 659 4.40e-69 250
MS.gene36515.t1 MTR_4g094985 25.743 707 406 21 296 956 125 758 8.62e-39 156
MS.gene36515.t1 MTR_8g045070 25.865 549 338 15 458 939 211 757 1.71e-26 117
MS.gene36515.t1 MTR_4g127710 22.801 614 362 20 429 973 135 705 5.75e-23 106
MS.gene36515.t1 MTR_7g117500 23.007 552 342 15 437 934 140 662 7.13e-23 105
MS.gene36515.t1 MTR_4g127710 22.801 614 362 20 429 973 135 705 8.00e-23 105
MS.gene36515.t1 MTR_3g108800 21.793 569 363 12 429 948 132 667 5.15e-22 103
MS.gene36515.t1 MTR_3g108800 21.793 569 363 12 429 948 131 666 5.19e-22 103
MS.gene36515.t1 MTR_2g036650 22.680 582 343 19 429 948 137 673 5.32e-22 103
MS.gene36515.t1 MTR_4g008650 24.343 571 338 18 458 937 255 822 5.94e-22 102
MS.gene36515.t1 MTR_1g009760 21.934 579 350 15 429 948 135 670 2.44e-21 100
MS.gene36515.t1 MTR_8g063880 22.262 557 334 16 439 934 138 656 3.29e-21 100
MS.gene36515.t1 MTR_6g016470 22.813 583 334 19 465 937 245 821 4.94e-21 100
MS.gene36515.t1 MTR_7g117500 23.290 541 343 17 437 934 140 651 6.27e-21 99.8
MS.gene36515.t1 MTR_1g009760 21.762 579 351 15 429 948 132 667 7.63e-21 99.4
MS.gene36515.t1 MTR_7g100110 31.282 195 100 4 788 950 636 828 1.86e-20 98.2
MS.gene36515.t1 MTR_6g011310 22.442 557 333 15 439 934 140 658 7.85e-20 95.9
MS.gene36515.t1 MTR_4g107500 22.442 606 358 18 439 973 142 706 9.24e-20 95.9
MS.gene36515.t1 MTR_7g095710 23.191 608 355 17 439 937 250 854 2.56e-19 94.4
MS.gene36515.t1 MTR_6g011310 22.383 554 332 14 439 934 140 653 3.31e-19 94.0
MS.gene36515.t1 MTR_8g006790 22.302 556 334 16 439 934 146 663 6.15e-19 93.2
MS.gene36515.t1 MTR_8g013780 30.198 202 107 5 772 939 174 375 1.70e-18 90.9
MS.gene36515.t1 MTR_8g027160 29.282 181 94 3 788 934 618 798 2.21e-18 91.3
MS.gene36515.t1 MTR_8g027160 29.282 181 94 3 788 934 618 798 3.28e-18 90.9
MS.gene36515.t1 MTR_2g449840 21.731 566 342 17 429 934 133 657 3.68e-18 90.5
MS.gene36515.t1 MTR_2g104860 20.885 565 348 13 429 934 130 654 7.05e-18 89.7
MS.gene36515.t1 MTR_4g116950 21.326 558 354 19 429 934 133 657 8.21e-18 89.4
MS.gene36515.t1 MTR_5g015590 32.402 179 92 3 790 939 649 827 1.33e-17 88.6
MS.gene36515.t1 MTR_5g015590 32.402 179 92 3 790 939 649 827 1.33e-17 89.0
MS.gene36515.t1 MTR_5g015590 32.402 179 92 3 790 939 649 827 1.36e-17 89.0
MS.gene36515.t1 MTR_2g038310 28.962 183 97 2 788 937 695 877 6.56e-17 86.7
MS.gene36515.t1 MTR_2g038310 28.962 183 97 2 788 937 695 877 6.56e-17 86.7
MS.gene36515.t1 MTR_0005s0140 30.508 177 95 3 789 937 568 744 7.16e-17 86.3
MS.gene36515.t1 MTR_8g090125 32.022 178 92 5 789 937 603 780 8.53e-17 86.3
MS.gene36515.t1 MTR_4g043690 30.508 177 95 3 789 937 653 829 9.71e-17 86.3
MS.gene36515.t1 MTR_4g096990 30.168 179 96 3 790 939 647 825 3.21e-16 84.3
MS.gene36515.t1 MTR_3g103070 28.283 198 113 4 771 939 456 653 6.73e-16 83.2
MS.gene36515.t1 MTR_3g103070 28.283 198 113 4 771 939 632 829 7.61e-16 83.2
MS.gene36515.t1 MTR_8g446010 32.044 181 92 5 789 939 601 780 1.62e-15 82.0
MS.gene36515.t1 MTR_4g008650 31.319 182 95 6 786 937 641 822 3.54e-15 80.9
MS.gene36515.t1 MTR_3g103270 27.119 177 98 1 789 934 614 790 1.44e-14 79.0
MS.gene36515.t1 MTR_4g008170 27.322 183 100 3 788 937 715 897 1.91e-14 78.6
MS.gene36515.t1 MTR_4g008170 27.322 183 100 3 788 937 708 890 2.51e-14 78.2
MS.gene36515.t1 MTR_1g009720 26.136 176 100 2 789 934 481 656 9.27e-13 73.2
MS.gene36515.t1 MTR_5g015590 34.328 134 59 3 790 894 649 782 2.76e-11 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36515.t1 AT5G44790 72.989 1007 245 6 1 989 1 998 0.0 1468
MS.gene36515.t1 AT1G63440 47.614 964 473 9 35 989 47 987 0.0 869
MS.gene36515.t1 AT1G63440 29.825 171 111 3 19 189 109 270 6.23e-12 70.5
MS.gene36515.t1 AT5G21930 36.919 688 378 15 323 979 213 875 7.63e-121 390
MS.gene36515.t1 AT5G21930 36.919 688 378 15 323 979 213 875 7.63e-121 390
MS.gene36515.t1 AT4G33520 36.351 696 380 13 300 979 270 918 1.67e-113 373
MS.gene36515.t1 AT4G33520 36.351 696 380 13 300 979 270 918 2.18e-113 372
MS.gene36515.t1 AT5G21930 35.610 688 364 16 323 979 213 852 4.47e-109 358
MS.gene36515.t1 AT5G21930 36.076 632 344 16 323 923 213 815 9.97e-99 330
MS.gene36515.t1 AT4G30110 28.070 741 422 20 203 930 13 655 8.64e-73 260
MS.gene36515.t1 AT4G30110 28.070 741 422 20 203 930 13 655 8.64e-73 260
MS.gene36515.t1 AT2G19110 26.256 796 458 22 203 980 23 707 3.46e-62 231
MS.gene36515.t1 AT2G19110 26.256 796 458 22 203 980 23 707 3.46e-62 231
MS.gene36515.t1 AT2G19110 26.256 796 458 22 203 980 23 707 3.46e-62 231
MS.gene36515.t1 AT4G30120 30.707 368 215 6 393 759 4 332 5.03e-44 164
MS.gene36515.t1 AT4G30120 27.240 558 320 15 203 759 19 491 1.95e-43 167
MS.gene36515.t1 AT4G37270 26.418 617 360 15 356 930 181 745 2.27e-34 142
MS.gene36515.t1 AT3G57330 25.214 583 347 17 439 937 184 761 3.00e-27 120
MS.gene36515.t1 AT2G41560 25.293 597 344 17 433 937 131 717 4.09e-27 119
MS.gene36515.t1 AT2G41560 25.293 597 344 17 433 937 131 717 4.09e-27 119
MS.gene36515.t1 AT2G41560 25.293 597 344 17 433 937 131 717 4.09e-27 119
MS.gene36515.t1 AT3G57330 25.214 583 347 17 439 937 239 816 5.10e-27 119
MS.gene36515.t1 AT2G41560 25.293 597 344 17 433 937 233 819 6.58e-27 119
MS.gene36515.t1 AT2G24520 24.691 567 340 15 437 948 113 647 5.33e-23 106
MS.gene36515.t1 AT2G24520 24.691 567 340 15 437 948 113 647 5.33e-23 106
MS.gene36515.t1 AT2G24520 24.691 567 340 15 437 948 176 710 6.00e-23 106
MS.gene36515.t1 AT1G80660 22.378 572 335 16 427 934 4 530 1.40e-21 101
MS.gene36515.t1 AT1G80660 22.281 570 334 16 429 934 135 659 3.59e-21 100
MS.gene36515.t1 AT1G80660 22.281 570 334 16 429 934 135 659 3.62e-21 100
MS.gene36515.t1 AT1G80660 22.281 570 334 16 429 934 135 659 3.72e-21 100
MS.gene36515.t1 AT3G60330 23.285 554 336 14 437 934 134 654 6.29e-21 99.8
MS.gene36515.t1 AT3G60330 23.285 554 336 14 437 934 134 654 6.29e-21 99.8
MS.gene36515.t1 AT3G60330 23.105 554 337 14 437 934 134 654 1.41e-20 98.6
MS.gene36515.t1 AT3G60330 23.105 554 337 14 437 934 134 654 1.41e-20 98.6
MS.gene36515.t1 AT4G30190 22.261 566 339 16 429 934 130 654 2.90e-20 97.4
MS.gene36515.t1 AT1G17260 22.000 550 343 15 439 934 144 661 3.08e-20 97.4
MS.gene36515.t1 AT5G57350 22.632 570 332 16 429 934 131 655 3.88e-20 97.1
MS.gene36515.t1 AT5G57350 22.632 570 332 16 429 934 131 655 3.88e-20 97.1
MS.gene36515.t1 AT5G57350 22.632 570 332 16 429 934 131 655 3.88e-20 97.1
MS.gene36515.t1 AT2G07560 22.301 565 339 17 429 934 133 656 6.11e-20 96.3
MS.gene36515.t1 AT1G07670 30.693 202 102 5 783 950 615 812 1.12e-19 95.9
MS.gene36515.t1 AT1G07670 30.693 202 102 5 783 950 615 812 1.12e-19 95.9
MS.gene36515.t1 AT1G07810 29.500 200 107 4 783 950 615 812 1.78e-19 95.1
MS.gene36515.t1 AT5G62670 21.818 605 363 18 439 973 140 704 3.86e-19 94.0
MS.gene36515.t1 AT3G47950 21.951 615 350 17 439 973 144 708 4.67e-19 93.6
MS.gene36515.t1 AT3G47950 21.951 615 350 17 439 973 144 708 4.67e-19 93.6
MS.gene36515.t1 AT2G18960 21.770 565 343 16 429 934 66 590 4.35e-18 90.5
MS.gene36515.t1 AT2G18960 21.770 565 343 16 429 934 66 590 4.35e-18 90.5
MS.gene36515.t1 AT2G18960 21.770 565 343 16 429 934 130 654 4.42e-18 90.5
MS.gene36515.t1 AT4G00900 29.032 186 98 4 783 934 609 794 5.46e-18 90.1
MS.gene36515.t1 AT4G00900 29.032 186 98 4 783 934 609 794 5.46e-18 90.1
MS.gene36515.t1 AT3G42640 22.144 569 336 16 429 934 133 657 1.40e-17 89.0
MS.gene36515.t1 AT4G37640 30.168 179 96 3 790 939 649 827 7.19e-17 86.7
MS.gene36515.t1 AT4G29900 27.037 270 141 7 701 937 613 859 7.27e-17 86.7
MS.gene36515.t1 AT4G29900 27.037 270 141 7 701 937 613 859 7.27e-17 86.7
MS.gene36515.t1 AT3G63380 29.670 182 95 2 789 937 640 821 2.70e-16 84.7
MS.gene36515.t1 AT2G22950 30.168 179 96 3 790 939 650 828 4.73e-16 84.0
MS.gene36515.t1 AT3G22910 30.435 184 95 4 789 939 636 819 5.03e-16 84.0
MS.gene36515.t1 AT5G57110 28.415 183 98 2 788 937 673 855 8.92e-16 83.2
MS.gene36515.t1 AT5G57110 28.415 183 98 2 788 937 673 855 8.92e-16 83.2
MS.gene36515.t1 AT5G57110 28.415 183 98 2 788 937 673 855 8.92e-16 83.2
MS.gene36515.t1 AT1G10130 27.684 177 97 1 789 934 582 758 1.25e-15 82.4
MS.gene36515.t1 AT3G21180 23.154 596 327 21 458 937 292 872 1.31e-15 82.4
MS.gene36515.t1 AT2G24520 23.724 392 233 8 610 948 26 404 1.33e-15 82.0
MS.gene36515.t1 AT5G57350 23.969 388 212 10 610 934 26 393 2.17e-14 78.2

Find 237 sgRNAs with CRISPR-Local

Find 460 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTCCTGCAACAGCTTTAT+TGG 0.127790 4.1:-17981890 MS.gene36515:CDS
CTTCTGTATGGCGCTCTTAC+TGG 0.137276 4.1:-17982036 MS.gene36515:CDS
TGTATTGTTGGGAAAGTATT+TGG 0.165698 4.1:-17981965 MS.gene36515:CDS
TTAATTCATTGGCATCATTT+TGG 0.206497 4.1:+17979424 None:intergenic
GGAGTATTGATTGGAGTCTT+AGG 0.229752 4.1:-17979031 MS.gene36515:CDS
TCAGATTCCCCTCTTCTTCA+TGG 0.235078 4.1:-17982286 MS.gene36515:intron
ATGGCGCTCTTACTGGATTT+TGG 0.241881 4.1:-17982029 MS.gene36515:CDS
GGTTGTAGGTGTTTGTTCTT+TGG 0.247236 4.1:-17983022 MS.gene36515:CDS
GAATGGGAGCTTTGGACATC+TGG 0.249424 4.1:+17981389 None:intergenic
GAGTTCTACTAGCTTCTTAA+TGG 0.251062 4.1:+17981912 None:intergenic
TATAGAGGGCCTCCAGAAAA+TGG 0.253304 4.1:-17978972 MS.gene36515:CDS
CTTGAGTCAGATAATTAATT+TGG 0.256617 4.1:-17981422 MS.gene36515:CDS
TTTGGTGGATGCAAGGGTTT+TGG 0.266860 4.1:-17983004 MS.gene36515:CDS
AACAATGGTGTGTTAATTAA+AGG 0.285608 4.1:-17979953 MS.gene36515:CDS
TCATGGTGGCAACAGGTGTT+GGG 0.293408 4.1:-17979979 MS.gene36515:CDS
TTGGTGAGTGTCATTCAATT+TGG 0.297350 4.1:-17982174 MS.gene36515:CDS
CACCATCTGAGCTCTTTCTA+AGG 0.299600 4.1:+17979922 None:intergenic
CCGCTGATGGTATTGTTACC+TGG 0.303580 4.1:-17981588 MS.gene36515:CDS
TGTGTTGATGAGAGATAATT+TGG 0.310034 4.1:-17978253 MS.gene36515:CDS
ATGCACTGCACACCCCTTCC+TGG 0.312304 4.1:+17979360 None:intergenic
GCTTATAACATTTGTATTGT+TGG 0.323122 4.1:-17981977 MS.gene36515:CDS
CGCTGATGGTATTGTTACCT+GGG 0.329723 4.1:-17981587 MS.gene36515:CDS
GGCCTTTCCTCATGGATGAT+TGG 0.331728 4.1:-17982209 MS.gene36515:CDS
TCTTCTTTGCTTATCACGTT+TGG 0.333112 4.1:+17983123 None:intergenic
TTATCTCCTGTAACCATTAC+AGG 0.336285 4.1:+17978941 None:intergenic
CATGGATGTCCTTGTTGCTT+TGG 0.338225 4.1:-17982094 MS.gene36515:CDS
AGGTATACTGCTGGGGCTCT+TGG 0.348034 4.1:-17980124 MS.gene36515:CDS
ACTCATCAAAGAAGTGAAAA+TGG 0.349385 4.1:+17979466 None:intergenic
CTTATAACATTTGTATTGTT+GGG 0.352878 4.1:-17981976 MS.gene36515:CDS
GTACTATCTCCAACCGGTTT+AGG 0.354063 4.1:+17983285 None:intergenic
TGGTGAGTGTCATTCAATTT+GGG 0.354358 4.1:-17982173 MS.gene36515:CDS
TCTGTTGCCAAGGTGTTTGC+AGG 0.360309 4.1:-17979845 MS.gene36515:CDS
TTAGAAGCCATTCTCGCATA+AGG 0.362030 4.1:+17982820 None:intergenic
CAGAGAGTTCGTCTATGTTT+CGG 0.362552 4.1:-17982789 MS.gene36515:CDS
GTGGCTTTAGCTACTTCATT+AGG 0.364293 4.1:-17983162 MS.gene36515:CDS
CAGATTCCCCTCTTCTTCAT+GGG 0.370257 4.1:-17982285 MS.gene36515:CDS
GAGTATTGATTGGAGTCTTA+GGG 0.372614 4.1:-17979030 MS.gene36515:CDS
TCAGACTTCTCTGCTATTCC+AGG 0.372749 4.1:-17979378 MS.gene36515:CDS
ATCACGCCTGTAATGGTTAC+AGG 0.374551 4.1:-17978947 MS.gene36515:CDS
GATGCCAATGAATTAAAATC+AGG 0.379078 4.1:-17979417 MS.gene36515:CDS
CGACGGAATTAACCGGATTC+AGG 0.380567 4.1:-17983624 MS.gene36515:CDS
AAGCTTCCACCATGGGTTGC+TGG 0.384722 4.1:-17978096 MS.gene36515:CDS
TCATATACTCGTTATTACTT+TGG 0.386797 4.1:-17982239 MS.gene36515:CDS
AGGTCGGCATTCAAGATGTT+AGG 0.387627 4.1:-17978446 MS.gene36515:CDS
AGCTGAGATCTTACATGAAC+CGG 0.387930 4.1:-17983319 MS.gene36515:CDS
AATGACAGAGCTACAATTGT+AGG 0.388212 4.1:+17980269 None:intergenic
GCTTTCAGAGCTCTTAGAAA+TGG 0.390325 4.1:-17982126 MS.gene36515:CDS
CCGTGGAGAATTTCTTAAAC+TGG 0.391473 4.1:-17979816 MS.gene36515:CDS
TCTGTTTGTGCTCTTCTGTA+TGG 0.392307 4.1:-17982048 MS.gene36515:CDS
TATAGACGGACAGCGTGTTT+TGG 0.392640 4.1:-17979337 MS.gene36515:intron
TGAAAGGGGTGAGGCAGTTT+CGG 0.402464 4.1:-17982963 MS.gene36515:CDS
ATGGATGTCCTTGTTGCTTT+GGG 0.403864 4.1:-17982093 MS.gene36515:CDS
GGTTTCAACCGGACCTAAAC+CGG 0.406822 4.1:-17983298 MS.gene36515:CDS
AAGTTATGTAAATGAGAGTA+TGG 0.407246 4.1:-17981560 MS.gene36515:CDS
CAACAGATATAGAAAACATA+AGG 0.407868 4.1:+17980050 None:intergenic
ACAACCAATAAAGCTGTTGC+AGG 0.410607 4.1:+17981886 None:intergenic
GTCATGGTGGCAACAGGTGT+TGG 0.416154 4.1:-17979980 MS.gene36515:CDS
AGTAATAACGAGTATATGAA+TGG 0.419114 4.1:+17982243 None:intergenic
TAATGGTTACAGGAGATAAC+TGG 0.422229 4.1:-17978937 MS.gene36515:CDS
GTTCTGATCAGGTTGGTAAC+AGG 0.435074 4.1:-17979156 MS.gene36515:intron
TAGAAGCCATTCTCGCATAA+GGG 0.435660 4.1:+17982821 None:intergenic
TTGCCGTACCAGTTGCTGCC+GGG 0.437758 4.1:-17978143 MS.gene36515:CDS
TCTATTTCTCTTTCTTCCAC+AGG 0.437986 4.1:+17981667 None:intergenic
AATAAAACCCCGGCAGCAAC+TGG 0.442685 4.1:+17978135 None:intergenic
ATCTCCAACCGGTTTAGGTC+CGG 0.444101 4.1:+17983290 None:intergenic
AGAAGCTTCTGTTGTTATAG+AGG 0.445207 4.1:-17978987 MS.gene36515:CDS
ATGCCCATGTGCACTTGGTT+TGG 0.446212 4.1:-17980017 MS.gene36515:CDS
GCATTGATCTCCTTCGAAAC+AGG 0.451969 4.1:+17981520 None:intergenic
TGCCAAGGTGTTTGCAGGAA+TGG 0.454986 4.1:-17979840 MS.gene36515:CDS
TCAAGTATTGTAGTAAGTCT+TGG 0.455124 4.1:+17978006 None:intergenic
GAGATCAATGCATCTGTCAT+TGG 0.457423 4.1:-17981508 MS.gene36515:CDS
AGTGTCATTCAATTTGGGAT+TGG 0.457590 4.1:-17982168 MS.gene36515:CDS
GCGAGAATGGCTTCTAAAGA+TGG 0.457955 4.1:-17982814 MS.gene36515:CDS
TTACATGAACCGGTTTCAAC+CGG 0.457960 4.1:-17983309 MS.gene36515:CDS
GTCATTTAAAATTCCTTCAA+CGG 0.461784 4.1:+17983209 None:intergenic
CTTGAAGAAAGTGCCAAGAC+TGG 0.462679 4.1:-17979073 MS.gene36515:CDS
TGGTACGGCAATAATATTGT+AGG 0.462863 4.1:+17978155 None:intergenic
GTTATTGCAATTGAAGATGC+AGG 0.464292 4.1:-17983096 MS.gene36515:CDS
TGTAGGTGTTTGTTCTTTGG+TGG 0.464503 4.1:-17983019 MS.gene36515:CDS
TCAACGACGACGGAATTAAC+CGG 0.465540 4.1:-17983631 MS.gene36515:CDS
TTTGTTCTTTGGTGGATGCA+AGG 0.466118 4.1:-17983011 MS.gene36515:CDS
GGTTTAGGTCCGGTTGAAAC+CGG 0.466163 4.1:+17983300 None:intergenic
GACTGTATCGGATCCTACTT+TGG 0.467006 4.1:+17981444 None:intergenic
AAGAATGCAATTGAAGATGC+AGG 0.469462 4.1:-17983348 MS.gene36515:CDS
GCAGATGTTGGTATGGCAAT+TGG 0.470750 4.1:-17978312 MS.gene36515:CDS
ATGGGTTGCTGGTGCATGCA+TGG 0.471253 4.1:-17978085 MS.gene36515:CDS
GCCGGAGTCATCGCCGGCGC+CGG 0.474208 4.1:+17983700 None:intergenic
TAGAAGCCCTTATGCGAGAA+TGG 0.476362 4.1:-17982827 MS.gene36515:CDS
CGGTGATTCTGACCTGAATC+CGG 0.483249 4.1:+17983612 None:intergenic
AGTTCTTAGTTCTAGATCGT+TGG 0.488758 4.1:-17982896 MS.gene36515:CDS
GAGATGTGGGCCTTTCCTCA+TGG 0.488956 4.1:-17982217 MS.gene36515:CDS
CGCTACAAGGATCCCAGTCT+TGG 0.489491 4.1:+17979060 None:intergenic
TCGTTATTACTTTGGAGATG+TGG 0.489608 4.1:-17982231 MS.gene36515:CDS
GTATGCTTAGTGGTATGAAA+GGG 0.490896 4.1:-17982978 MS.gene36515:CDS
ATTGCATGCCCATGTGCACT+TGG 0.493098 4.1:-17980022 MS.gene36515:CDS
AATGGGAATCACGCCTGTAA+TGG 0.494340 4.1:-17978954 MS.gene36515:CDS
CGGATTCAGGTCAGAATCAC+CGG 0.498291 4.1:-17983611 MS.gene36515:CDS
AGTATGCTTAGTGGTATGAA+AGG 0.501872 4.1:-17982979 MS.gene36515:CDS
ATTGCCGTACCAGTTGCTGC+CGG 0.503085 4.1:-17978144 MS.gene36515:CDS
CGTTATTACTTTGGAGATGT+GGG 0.506990 4.1:-17982230 MS.gene36515:CDS
TGCCGTACCAGTTGCTGCCG+GGG 0.507352 4.1:-17978142 MS.gene36515:CDS
GCATTAGCTGCTGCAGATGT+TGG 0.507757 4.1:-17978324 MS.gene36515:CDS
AATGGGAGCTTTGGACATCT+GGG 0.508519 4.1:+17981390 None:intergenic
GTCGCCAAACCAAGTGCACA+TGG 0.508959 4.1:+17980013 None:intergenic
ATAGAGGGCCTCCAGAAAAT+GGG 0.509737 4.1:-17978971 MS.gene36515:CDS
GGCAATAATATTGTAGGCCA+TGG 0.510022 4.1:+17978161 None:intergenic
TACGTTATATTTGATAAGAC+AGG 0.512329 4.1:-17979896 MS.gene36515:CDS
GGAGTCATCGCCGGCGCCGG+TGG 0.512775 4.1:+17983703 None:intergenic
GTTGGTATGGCAATTGGAGC+TGG 0.513083 4.1:-17978306 MS.gene36515:CDS
GAAATATATACAAACCTCCT+TGG 0.514370 4.1:+17978895 None:intergenic
CATAAGTATTTCTACTGAAG+TGG 0.514915 4.1:-17979113 MS.gene36515:CDS
ACTGCTGTCATGGTGGCAAC+AGG 0.515401 4.1:-17979986 MS.gene36515:CDS
TTGTTCTTTGGTGGATGCAA+GGG 0.516975 4.1:-17983010 MS.gene36515:CDS
GATGAGTCCTCTCTTACCAA+TGG 0.518678 4.1:-17979450 MS.gene36515:CDS
CACATTAAAGCTACCAAAGT+AGG 0.519785 4.1:-17981457 MS.gene36515:CDS
AGGGCAGAGGTTATGCCTGC+AGG 0.519939 4.1:-17978426 MS.gene36515:CDS
AGAGGTTATGCCTGCAGGAA+AGG 0.525897 4.1:-17978421 MS.gene36515:CDS
ATACTCCATTGCACGCTACA+AGG 0.526385 4.1:+17979047 None:intergenic
GGCGACACCAACTGCTGTCA+TGG 0.527208 4.1:-17979996 MS.gene36515:CDS
GGACATGAGAGCGGCTTCAA+CGG 0.527618 4.1:+17983562 None:intergenic
ACCACATCAGCCTTTCCTGC+AGG 0.530022 4.1:+17978411 None:intergenic
CATGGTGGCAACAGGTGTTG+GGG 0.530178 4.1:-17979978 MS.gene36515:CDS
TAAGACAGGAACTCTAACTC+AGG 0.530527 4.1:-17979882 MS.gene36515:CDS
GTAATAACGAGTATATGAAT+GGG 0.531622 4.1:+17982244 None:intergenic
TGATTGGTTGAAGTGGGCAT+TGG 0.532100 4.1:-17982193 MS.gene36515:CDS
ATCCTTAGAAAGAGCTCAGA+TGG 0.532974 4.1:-17979924 MS.gene36515:CDS
GCAAGCGGCGCATGTCATGC+CGG 0.533829 4.1:+17983592 None:intergenic
CTTTGGTAGCTTTAATGTGA+AGG 0.535532 4.1:+17981461 None:intergenic
GGCATCAGATGTCTTCCCCT+TGG 0.535998 4.1:+17981933 None:intergenic
GATAATTAATTTGGTCGAGA+CGG 0.537531 4.1:-17981413 MS.gene36515:CDS
AACAGATATAGAAAACATAA+GGG 0.538427 4.1:+17980051 None:intergenic
GCCGCTCTCATGTCCGTCGA+CGG 0.539449 4.1:-17983554 MS.gene36515:CDS
AGATTCCCCTCTTCTTCATG+GGG 0.539845 4.1:-17982284 MS.gene36515:CDS
ACCGGCGCCGGCGATGACTC+CGG 0.540319 4.1:-17983701 MS.gene36515:CDS
GAGTATATGAATGGGATATG+AGG 0.542597 4.1:+17982252 None:intergenic
CATTCAAGATGTTAGGGCAG+AGG 0.545262 4.1:-17978439 MS.gene36515:CDS
GAAGCTTCTGTTGTTATAGA+GGG 0.546172 4.1:-17978986 MS.gene36515:CDS
GGTCGGCATTCAAGATGTTA+GGG 0.547169 4.1:-17978445 MS.gene36515:CDS
GGGAATCAAGCTTCCACCAT+GGG 0.547653 4.1:-17978103 MS.gene36515:CDS
AGGAAGCTGCTGGTGGAAAG+TGG 0.550070 4.1:-17979136 MS.gene36515:CDS
AACTGCTCGAGCTGTTGCCA+AGG 0.550725 4.1:-17978912 MS.gene36515:CDS
ATTTACATAACTTGAGCCCC+AGG 0.551493 4.1:+17981570 None:intergenic
ATTGAATTATGTATTTGCCA+TGG 0.551910 4.1:-17978178 MS.gene36515:CDS
AAGGACACCATGCAAATTGA+TGG 0.553347 4.1:+17981480 None:intergenic
GTGGAAGTTAGTTGAATACT+CGG 0.553506 4.1:+17983722 None:intergenic
AGATGGTAGTATAGTTGCAA+TGG 0.554431 4.1:-17978373 MS.gene36515:CDS
AGCCACTGTCTCTGTTGCCA+AGG 0.554586 4.1:-17979855 MS.gene36515:CDS
TTGGGATCCATTGGTAAGAG+AGG 0.555619 4.1:+17979443 None:intergenic
CAACTAACTTCCACCGGCGC+CGG 0.556089 4.1:-17983713 MS.gene36515:CDS
TTCTCTGCTATTCCAGGAAG+GGG 0.557195 4.1:-17979372 MS.gene36515:CDS
TGGTAGTATAGTTGCAATGG+TGG 0.558345 4.1:-17978370 MS.gene36515:CDS
GGCTAGCAGTGAACACCCGC+TGG 0.559219 4.1:-17979514 MS.gene36515:CDS
GCGTGCAATGGAGTATTGAT+TGG 0.559641 4.1:-17979040 MS.gene36515:CDS
ACCACCGTACTATCTCCAAC+CGG 0.560837 4.1:+17983279 None:intergenic
GCGTGTGTGAATTCCGTTGA+AGG 0.561783 4.1:-17983222 MS.gene36515:CDS
ACATCTGCAGCAGCTAATGC+AGG 0.562486 4.1:+17978327 None:intergenic
TAAACTGGTGGCTTCTGCTG+AGG 0.563783 4.1:-17979801 MS.gene36515:intron
GGGATCCTTGTAGCGTGCAA+TGG 0.564317 4.1:-17979052 MS.gene36515:CDS
AATGGTGTGTTAATTAAAGG+AGG 0.566500 4.1:-17979950 MS.gene36515:CDS
GCGAACATCTTCGAGATCGC+CGG 0.566672 4.1:+17983682 None:intergenic
GGTTGGTAACAGGAAGCTGC+TGG 0.567598 4.1:-17979146 MS.gene36515:CDS
CTTCTCTGCTATTCCAGGAA+GGG 0.570582 4.1:-17979373 MS.gene36515:CDS
GTATTTGGAATGTCTTGCCA+AGG 0.571096 4.1:-17981950 MS.gene36515:CDS
TCATGGATGATTGGTTGAAG+TGG 0.573589 4.1:-17982200 MS.gene36515:CDS
TTGAAGAAAGTGCCAAGACT+GGG 0.574392 4.1:-17979072 MS.gene36515:CDS
GTCACTAGGTTGAATAAGCA+AGG 0.575805 4.1:+17981642 None:intergenic
CATTATTGACACTATTGTGT+TGG 0.576900 4.1:-17980250 MS.gene36515:intron
TTGGAGCATACCCAGATGAA+TGG 0.578362 4.1:-17980105 MS.gene36515:CDS
ACTTCTCTGCTATTCCAGGA+AGG 0.579821 4.1:-17979374 MS.gene36515:CDS
CAGGTAACAATACCATCAGC+GGG 0.580491 4.1:+17981589 None:intergenic
GGTACAAAGATTCCCGCTGA+TGG 0.580974 4.1:-17981601 MS.gene36515:CDS
GATCTAGAACTAAGAACTTG+AGG 0.581982 4.1:+17982901 None:intergenic
ATGCCAATGAATTAAAATCA+GGG 0.582049 4.1:-17979416 MS.gene36515:CDS
TAGAAATGGTTCAACAAACA+TGG 0.582828 4.1:-17982112 MS.gene36515:CDS
AGCTGCTGCAGATGTTGGTA+TGG 0.585708 4.1:-17978319 MS.gene36515:CDS
TGCTCGAGCTGTTGCCAAGG+AGG 0.585770 4.1:-17978909 MS.gene36515:intron
TCAGCGGGAATCTTTGTACC+AGG 0.585900 4.1:+17981604 None:intergenic
GTCCATTCCTGCAAACACCT+TGG 0.586968 4.1:+17979838 None:intergenic
GGAGGTACCATCAATTTGCA+TGG 0.587008 4.1:-17981487 MS.gene36515:CDS
GAGATCGCCGGAGTCATCGC+CGG 0.588833 4.1:+17983694 None:intergenic
TGGAGAATTTCTTAAACTGG+TGG 0.589048 4.1:-17979813 MS.gene36515:CDS
AGTATTCAACTAACTTCCAC+CGG 0.589297 4.1:-17983719 MS.gene36515:CDS
AACCCCGGCAGCAACTGGTA+CGG 0.593335 4.1:+17978140 None:intergenic
TTATTGGTTGTTAAAGACAA+AGG 0.593463 4.1:-17981874 MS.gene36515:intron
TATTTGGAATGTCTTGCCAA+GGG 0.598379 4.1:-17981949 MS.gene36515:CDS
GCCTGCAGGAAAGGCTGATG+TGG 0.598442 4.1:-17978412 MS.gene36515:CDS
TTCAACGGAGTTAGAGCAAG+CGG 0.598928 4.1:+17983577 None:intergenic
AACCAATCATCCATGAGGAA+AGG 0.599373 4.1:+17982207 None:intergenic
ATGCATGCACCAGCAACCCA+TGG 0.601867 4.1:+17978087 None:intergenic
TATGCTTAGTGGTATGAAAG+GGG 0.608048 4.1:-17982977 MS.gene36515:CDS
GACACATTAAAAGTTCTGCC+TGG 0.608452 4.1:-17981622 MS.gene36515:CDS
TCAACCGGACCTAAACCGGT+TGG 0.610393 4.1:-17983294 MS.gene36515:CDS
ATAGTTGCAATGGTGGGTGA+CGG 0.612936 4.1:-17978363 MS.gene36515:CDS
AGTATTGATTGGAGTCTTAG+GGG 0.613540 4.1:-17979029 MS.gene36515:CDS
TTGGTATGGCAATTGGAGCT+GGG 0.615027 4.1:-17978305 MS.gene36515:CDS
TAAACCGGTTGGAGATAGTA+CGG 0.617219 4.1:-17983283 MS.gene36515:CDS
CGAGTCTATACCTGTTTCGA+AGG 0.617498 4.1:-17981530 MS.gene36515:CDS
ATCAATGCATCTGTCATTGG+AGG 0.619885 4.1:-17981505 MS.gene36515:CDS
CTGTAGTTCCCAAAGCAACA+AGG 0.623003 4.1:+17982085 None:intergenic
ACAGGTGTTGGGGCTAACAA+TGG 0.625686 4.1:-17979968 MS.gene36515:CDS
GGAAGCTTGATTCCCAGTGA+AGG 0.626009 4.1:+17978111 None:intergenic
CATGGATGATTGGTTGAAGT+GGG 0.626764 4.1:-17982199 MS.gene36515:CDS
TGGTAACAGGAAGCTGCTGG+TGG 0.634413 4.1:-17979143 MS.gene36515:CDS
TTTCAATAGAAACCTCGTCA+AGG 0.635047 4.1:-17983483 MS.gene36515:intron
GGCTTGAATTACACCGTCGA+CGG 0.636046 4.1:+17983541 None:intergenic
CCAGGTAACAATACCATCAG+CGG 0.638825 4.1:+17981588 None:intergenic
GTGGTTGGACAGTTCACGAT+CGG 0.640067 4.1:-17983261 MS.gene36515:CDS
TATCTGACTCAAGACTGTAT+CGG 0.640076 4.1:+17981432 None:intergenic
ACTCACACTAAGAAGCAAGC+TGG 0.641334 4.1:+17982756 None:intergenic
CACCTTGGCAACAGAGACAG+TGG 0.642911 4.1:+17979853 None:intergenic
AAGACAGGAACTCTAACTCA+GGG 0.647613 4.1:-17979881 MS.gene36515:CDS
GATTCCCCTCTTCTTCATGG+GGG 0.647766 4.1:-17982283 MS.gene36515:CDS
GTTGGAGATAGTACGGTGGT+TGG 0.649965 4.1:-17983276 MS.gene36515:CDS
GTTTCTATTGAAAACGACGT+CGG 0.653328 4.1:+17983493 None:intergenic
CATGCACCAGCAACCCATGG+TGG 0.653724 4.1:+17978090 None:intergenic
GGTGTGCAGTGCATTATAGA+CGG 0.653890 4.1:-17979351 MS.gene36515:CDS
GTAAATGAGAGTATGGTGAC+TGG 0.657765 4.1:-17981553 MS.gene36515:CDS
TGGGAATCAAGCTTCCACCA+TGG 0.659512 4.1:-17978104 MS.gene36515:CDS
ATTTGGAATGTCTTGCCAAG+GGG 0.662416 4.1:-17981948 MS.gene36515:CDS
CCAGTTTAAGAAATTCTCCA+CGG 0.666614 4.1:+17979816 None:intergenic
ATTAGCGTTAAACCTTGACG+AGG 0.671055 4.1:+17983471 None:intergenic
ACATTAAGCTCACTCAACAA+AGG 0.672540 4.1:+17982934 None:intergenic
TTAGTGGTATGAAAGGGGTG+AGG 0.677514 4.1:-17982972 MS.gene36515:CDS
GTTGGACAGTTCACGATCGG+CGG 0.678514 4.1:-17983258 MS.gene36515:CDS
GGTAGTATAGTTGCAATGGT+GGG 0.680572 4.1:-17978369 MS.gene36515:CDS
TCGCCAAACCAAGTGCACAT+GGG 0.686508 4.1:+17980014 None:intergenic
GTGTTTGCAGGAATGGACCG+TGG 0.689642 4.1:-17979833 MS.gene36515:CDS
GATCGGCGGTATGACATGTG+CGG 0.691196 4.1:-17983244 MS.gene36515:CDS
GACACCAACTGCTGTCATGG+TGG 0.692490 4.1:-17979993 MS.gene36515:CDS
ACCGTCGACGGACATGAGAG+CGG 0.693610 4.1:+17983553 None:intergenic
GTTGCCACCATGACAGCAGT+TGG 0.695583 4.1:+17979989 None:intergenic
CAGTGAAGGAAATAAAACCC+CGG 0.701022 4.1:+17978125 None:intergenic
GCTGATGGTATTGTTACCTG+GGG 0.702676 4.1:-17981586 MS.gene36515:CDS
TGGAATAGCAGAGAAGTCTG+AGG 0.707769 4.1:+17979380 None:intergenic
CCAATGAATTAAAATCAGGG+TGG 0.720072 4.1:-17979413 MS.gene36515:CDS
ACTTCAACCAATCATCCATG+AGG 0.728611 4.1:+17982202 None:intergenic
ACCGGTTGGAGATAGTACGG+TGG 0.764274 4.1:-17983280 MS.gene36515:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACATATTTTGTTTAAATTTT+AGG - chr4.1:17981574-17981593 MS.gene36515:CDS 10.0%
!!! TTTCTATAATATTTTCTTTT+TGG - chr4.1:17982842-17982861 MS.gene36515:CDS 10.0%
!! GAAAAGAAAAGAAAAAATAT+TGG + chr4.1:17980020-17980039 None:intergenic 15.0%
!! TTTATGAATAATTCTATGTA+AGG + chr4.1:17981224-17981243 None:intergenic 15.0%
!!! ATTGTTATTATCTTTAATGA+AGG - chr4.1:17982431-17982450 MS.gene36515:intron 15.0%
!!! TATAATATTTTCTTTTTGGT+TGG - chr4.1:17982846-17982865 MS.gene36515:CDS 15.0%
!! AAATATGGCTATAGATTAAA+GGG + chr4.1:17978990-17979009 None:intergenic 20.0%
!! AACAGATATAGAAAACATAA+GGG + chr4.1:17981670-17981689 None:intergenic 20.0%
!! ACAAGAAACTAAACAAAATA+AGG + chr4.1:17979365-17979384 None:intergenic 20.0%
!! CAAAATAACAAGAACAAATA+TGG + chr4.1:17979005-17979024 None:intergenic 20.0%
!! CAAGAAACTAAACAAAATAA+GGG + chr4.1:17979364-17979383 None:intergenic 20.0%
!! CTTATAACATTTGTATTGTT+GGG - chr4.1:17979742-17979761 MS.gene36515:intron 20.0%
!! TAAAATGCCAAAACATTATT+AGG + chr4.1:17982093-17982112 None:intergenic 20.0%
!! TACACTATCTATTGAAATTT+GGG + chr4.1:17980782-17980801 None:intergenic 20.0%
!! TTACACTATCTATTGAAATT+TGG + chr4.1:17980783-17980802 None:intergenic 20.0%
!!! ATGACAGTTATAACAAATTT+TGG - chr4.1:17983198-17983217 MS.gene36515:CDS 20.0%
!!! ATTCAACAGAGTTTTATATT+AGG + chr4.1:17980891-17980910 None:intergenic 20.0%
!!! CATATTTGTTCTTGTTATTT+TGG - chr4.1:17979003-17979022 MS.gene36515:CDS 20.0%
!!! GTGTTTTGGTAAAATTTTTT+TGG - chr4.1:17982395-17982414 MS.gene36515:intron 20.0%
!!! TGACAGTTATAACAAATTTT+GGG - chr4.1:17983199-17983218 MS.gene36515:CDS 20.0%
!!! TTATTGATTCCAATTATTTC+AGG - chr4.1:17981253-17981272 MS.gene36515:intron 20.0%
!!! TTTTTCTTTTCTTTTCTAGA+TGG - chr4.1:17980024-17980043 MS.gene36515:CDS 20.0%
! AAAATATGTACACAGAAGTA+AGG + chr4.1:17981563-17981582 None:intergenic 25.0%
! AAAATATTGTTCTGACTCTA+CGG + chr4.1:17981174-17981193 None:intergenic 25.0%
! AACAATGGTGTGTTAATTAA+AGG - chr4.1:17981765-17981784 MS.gene36515:intron 25.0%
! AACCTAAATATAAGACAATC+AGG + chr4.1:17979934-17979953 None:intergenic 25.0%
! AAGTTATGTAAATGAGAGTA+TGG - chr4.1:17980158-17980177 MS.gene36515:intron 25.0%
! AATGTATCTTAAGTCATTTG+TGG + chr4.1:17981378-17981397 None:intergenic 25.0%
! ACACTATCTATTGAAATTTG+GGG + chr4.1:17980781-17980800 None:intergenic 25.0%
! ACTAAGTAAAAATGCATACA+TGG + chr4.1:17980993-17981012 None:intergenic 25.0%
! AGTAATAACGAGTATATGAA+TGG + chr4.1:17979478-17979497 None:intergenic 25.0%
! AGTATGATTAAAACCATAAC+TGG - chr4.1:17983029-17983048 MS.gene36515:CDS 25.0%
! ATAAACGTGAGTTTGAATTA+TGG + chr4.1:17981291-17981310 None:intergenic 25.0%
! ATGCCAATGAATTAAAATCA+GGG - chr4.1:17982302-17982321 MS.gene36515:intron 25.0%
! ATTCTTAATATCTTCATCCT+AGG + chr4.1:17978356-17978375 None:intergenic 25.0%
! ATTGAATTATGTATTTGCCA+TGG - chr4.1:17983540-17983559 MS.gene36515:CDS 25.0%
! CAAATATGGCTATAGATTAA+AGG + chr4.1:17978991-17979010 None:intergenic 25.0%
! CAACAGATATAGAAAACATA+AGG + chr4.1:17981671-17981690 None:intergenic 25.0%
! CATACAGAAATTTCATCTAA+CGG - chr4.1:17979239-17979258 MS.gene36515:intron 25.0%
! CTGATACCATGTTAAAATTT+GGG + chr4.1:17980576-17980595 None:intergenic 25.0%
! CTTGAGTCAGATAATTAATT+TGG - chr4.1:17980296-17980315 MS.gene36515:intron 25.0%
! GCTTATAACATTTGTATTGT+TGG - chr4.1:17979741-17979760 MS.gene36515:intron 25.0%
! GTAATAACGAGTATATGAAT+GGG + chr4.1:17979477-17979496 None:intergenic 25.0%
! TAAGATACATTAACTAACTC+AGG - chr4.1:17981387-17981406 MS.gene36515:CDS 25.0%
! TACGTTATATTTGATAAGAC+AGG - chr4.1:17981822-17981841 MS.gene36515:intron 25.0%
! TCATATACTCGTTATTACTT+TGG - chr4.1:17979479-17979498 MS.gene36515:CDS 25.0%
! TCTGATACCATGTTAAAATT+TGG + chr4.1:17980577-17980596 None:intergenic 25.0%
! TGATACCATGTTAAAATTTG+GGG + chr4.1:17980575-17980594 None:intergenic 25.0%
! TGTTGAATTATTTAAACCCT+AGG - chr4.1:17978336-17978355 MS.gene36515:CDS 25.0%
! TTCTTAATATCTTCATCCTA+GGG + chr4.1:17978355-17978374 None:intergenic 25.0%
!! ATAATCAGCAAACTTTTGAA+TGG + chr4.1:17980349-17980368 None:intergenic 25.0%
!! CAACTTTCCTAATAATGTTT+TGG - chr4.1:17982083-17982102 MS.gene36515:CDS 25.0%
!! GTATGCATTTTTACTTAGTT+TGG - chr4.1:17980994-17981013 MS.gene36515:intron 25.0%
!! GTCATTTAAAATTCCTTCAA+CGG + chr4.1:17978512-17978531 None:intergenic 25.0%
!! GTTTTATGTCTTTTATAGCT+GGG + chr4.1:17982021-17982040 None:intergenic 25.0%
!! TAATCAGCAAACTTTTGAAT+GGG + chr4.1:17980348-17980367 None:intergenic 25.0%
!! TAATGAAGGAATATGTTTTG+TGG - chr4.1:17982445-17982464 MS.gene36515:intron 25.0%
!! TAATTCATTGGCATCATTTT+GGG + chr4.1:17982296-17982315 None:intergenic 25.0%
!! TATGTTTTCTATATCTGTTG+TGG - chr4.1:17981671-17981690 MS.gene36515:CDS 25.0%
!! TGTTTTATGTCTTTTATAGC+TGG + chr4.1:17982022-17982041 None:intergenic 25.0%
!! TGTTTTCTTAAGAAAATGGA+GGG - chr4.1:17979894-17979913 MS.gene36515:CDS 25.0%
!! TTAATTCATTGGCATCATTT+TGG + chr4.1:17982297-17982316 None:intergenic 25.0%
!! TTATTGGTTGTTAAAGACAA+AGG - chr4.1:17979844-17979863 MS.gene36515:CDS 25.0%
!! TTGATTTTCTTGTGCATAAA+AGG - chr4.1:17983072-17983091 MS.gene36515:CDS 25.0%
!! TTGTTTTCTTAAGAAAATGG+AGG - chr4.1:17979893-17979912 MS.gene36515:CDS 25.0%
!!! AAGAAAATGTGTTTTTTGAC+AGG - chr4.1:17983252-17983271 MS.gene36515:CDS 25.0%
!!! ATTCCAATTATTTCAGGTTT+AGG - chr4.1:17981259-17981278 MS.gene36515:intron 25.0%
!!! ATTTAGGTTGAAATTAGTGA+TGG - chr4.1:17979945-17979964 MS.gene36515:CDS 25.0%
!!! CTTTTCTTAAGAGTTGATAA+AGG - chr4.1:17982497-17982516 MS.gene36515:intron 25.0%
!!! GCTTTGTTTTCTTAAGAAAA+TGG - chr4.1:17979890-17979909 MS.gene36515:CDS 25.0%
!!! GTTTGTTTAGTTACTGATTT+TGG - chr4.1:17978309-17978328 MS.gene36515:CDS 25.0%
!!! TAAATTTTAGGTATACTGCT+GGG - chr4.1:17981586-17981605 MS.gene36515:CDS 25.0%
!!! TTAAATTTTAGGTATACTGC+TGG - chr4.1:17981585-17981604 MS.gene36515:CDS 25.0%
!!! TTTGTTTTGAAGTAAAGCAA+CGG + chr4.1:17978204-17978223 None:intergenic 25.0%
AAATATTGTTCTGACTCTAC+GGG + chr4.1:17981173-17981192 None:intergenic 30.0%
AAGCCTAAACCTGAAATAAT+TGG + chr4.1:17981265-17981284 None:intergenic 30.0%
AATGGTGTGTTAATTAAAGG+AGG - chr4.1:17981768-17981787 MS.gene36515:intron 30.0%
ACACCAGCAATAACTAAAAA+TGG + chr4.1:17980969-17980988 None:intergenic 30.0%
ACTCATCAAAGAAGTGAAAA+TGG + chr4.1:17982255-17982274 None:intergenic 30.0%
ACTTTCTTTACCACAAAGAA+TGG + chr4.1:17981023-17981042 None:intergenic 30.0%
ATTGATGTTATGGTCAAACT+TGG - chr4.1:17983227-17983246 MS.gene36515:CDS 30.0%
ATTTCTATGATGCCTATTAG+AGG - chr4.1:17982130-17982149 MS.gene36515:CDS 30.0%
CATTATTGACACTATTGTGT+TGG - chr4.1:17981468-17981487 MS.gene36515:CDS 30.0%
CGTTAGATGAAATTTCTGTA+TGG + chr4.1:17979241-17979260 None:intergenic 30.0%
CTAACTCATCCTTAAAAAAC+CGG + chr4.1:17980757-17980776 None:intergenic 30.0%
GAAATATATACAAACCTCCT+TGG + chr4.1:17982826-17982845 None:intergenic 30.0%
GATGCCAATGAATTAAAATC+AGG - chr4.1:17982301-17982320 MS.gene36515:intron 30.0%
GTCCTGATTGTCTTATATTT+AGG - chr4.1:17979929-17979948 MS.gene36515:CDS 30.0%
TAGAAATGGTTCAACAAACA+TGG - chr4.1:17979606-17979625 MS.gene36515:intron 30.0%
TATAAAACTATCCCTATCCA+CGG + chr4.1:17982993-17983012 None:intergenic 30.0%
TTATGCACAAGAAAATCAAC+AGG + chr4.1:17983071-17983090 None:intergenic 30.0%
TTATGGAGCATAAAATTCTG+TGG + chr4.1:17979198-17979217 None:intergenic 30.0%
TTGGCTATATTATGCAATGT+AGG + chr4.1:17980823-17980842 None:intergenic 30.0%
TTTCCCAATACTATCAATGT+AGG + chr4.1:17980453-17980472 None:intergenic 30.0%
! ACAGAATTTTATGCTCCATA+AGG - chr4.1:17979197-17979216 MS.gene36515:intron 30.0%
! AGTCAAGATGAGATTGTTTT+AGG - chr4.1:17978673-17978692 MS.gene36515:intron 30.0%
! CAACTATACTACCATCTTTT+TGG + chr4.1:17983342-17983361 None:intergenic 30.0%
! CAGAATTTTATGCTCCATAA+GGG - chr4.1:17979198-17979217 MS.gene36515:intron 30.0%
! CATAAGTATTTCTACTGAAG+TGG - chr4.1:17982605-17982624 MS.gene36515:intron 30.0%
! GATAATTAATTTGGTCGAGA+CGG - chr4.1:17980305-17980324 MS.gene36515:intron 30.0%
! GGAATTTTAAATGACATCAC+CGG - chr4.1:17978517-17978536 MS.gene36515:intron 30.0%
! GTTTTCTTAAGAAAATGGAG+GGG - chr4.1:17979895-17979914 MS.gene36515:CDS 30.0%
! TCAAGTATTGTAGTAAGTCT+TGG + chr4.1:17983715-17983734 None:intergenic 30.0%
! TCTTGAGAGAGTATATAAAG+AGG - chr4.1:17980710-17980729 MS.gene36515:intron 30.0%
! TGCTGATTATGTAAGTATTG+TGG - chr4.1:17980359-17980378 MS.gene36515:intron 30.0%
! TGCTTTAAACTCAAACCTTA+GGG - chr4.1:17979123-17979142 MS.gene36515:CDS 30.0%
! TGTGTTGATGAGAGATAATT+TGG - chr4.1:17983465-17983484 MS.gene36515:intron 30.0%
! TTTTATCGTAGGAATCTAGT+AGG + chr4.1:17978061-17978080 None:intergenic 30.0%
!! AAATTTTAGGTATACTGCTG+GGG - chr4.1:17981587-17981606 MS.gene36515:CDS 30.0%
!! ACAAAGTGGTTTCCATTTTT+CGG + chr4.1:17981642-17981661 None:intergenic 30.0%
!! AGAACTTTTAATGTGTCACT+AGG + chr4.1:17980093-17980112 None:intergenic 30.0%
!! ATACTGTTGATTCCTCTAAT+AGG + chr4.1:17982145-17982164 None:intergenic 30.0%
!! GTCAAGATGAGATTGTTTTA+GGG - chr4.1:17978674-17978693 MS.gene36515:intron 30.0%
!! TAATTTTGAGTGCAGTTTCA+AGG - chr4.1:17982882-17982901 MS.gene36515:CDS 30.0%
!! TGTATTGTTGGGAAAGTATT+TGG - chr4.1:17979753-17979772 MS.gene36515:intron 30.0%
!!! AAATGTGTTTTTTGACAGGT+CGG - chr4.1:17983256-17983275 MS.gene36515:CDS 30.0%
!!! CTTCCATTTTTAGTTATTGC+TGG - chr4.1:17980963-17980982 MS.gene36515:intron 30.0%
!!! TCAAGATGAGATTGTTTTAG+GGG - chr4.1:17978675-17978694 MS.gene36515:intron 30.0%
AAGAATGCAATTGAAGATGC+AGG - chr4.1:17978370-17978389 MS.gene36515:CDS 35.0%
AATATAGCCAATCCAAAGCT+TGG - chr4.1:17980832-17980851 MS.gene36515:intron 35.0%
AATGACAGAGCTACAATTGT+AGG + chr4.1:17981452-17981471 None:intergenic 35.0%
ACATAAGGGCAAAAACAAAG+TGG + chr4.1:17981656-17981675 None:intergenic 35.0%
ACATTAAGCTCACTCAACAA+AGG + chr4.1:17978787-17978806 None:intergenic 35.0%
AGAAGCTTCTGTTGTTATAG+AGG - chr4.1:17982731-17982750 MS.gene36515:intron 35.0%
AGATGGTAGTATAGTTGCAA+TGG - chr4.1:17983345-17983364 MS.gene36515:CDS 35.0%
AGTATGCTTAGTGGTATGAA+AGG - chr4.1:17978739-17978758 MS.gene36515:intron 35.0%
AGTATTCAACTAACTTCCAC+CGG - chr4.1:17977999-17978018 MS.gene36515:CDS 35.0%
AGTTGAGCTCATTGTCAAAA+AGG + chr4.1:17982068-17982087 None:intergenic 35.0%
AGTTTGGATTCCATTCTTTG+TGG - chr4.1:17981010-17981029 MS.gene36515:intron 35.0%
ATAAAAACCATCCAAGAGCA+CGG + chr4.1:17980385-17980404 None:intergenic 35.0%
ATAGGCATCATAGAAATGCA+AGG + chr4.1:17982127-17982146 None:intergenic 35.0%
ATGAACTAATGCAACCCTTA+TGG + chr4.1:17979215-17979234 None:intergenic 35.0%
ATGTTCCATGCAAAAGATGT+TGG + chr4.1:17982931-17982950 None:intergenic 35.0%
CAATACTATCAATGTAGGCA+GGG + chr4.1:17980448-17980467 None:intergenic 35.0%
CACAAATCAATGCAAAAGCA+TGG + chr4.1:17979397-17979416 None:intergenic 35.0%
CACATTAAAGCTACCAAAGT+AGG - chr4.1:17980261-17980280 MS.gene36515:CDS 35.0%
CCAATGAATTAAAATCAGGG+TGG - chr4.1:17982305-17982324 MS.gene36515:intron 35.0%
CCAGTTTAAGAAATTCTCCA+CGG + chr4.1:17981905-17981924 None:intergenic 35.0%
CTAACTCATCCTTACAAAAC+CGG + chr4.1:17980551-17980570 None:intergenic 35.0%
GAAGCTTCTGTTGTTATAGA+GGG - chr4.1:17982732-17982751 MS.gene36515:intron 35.0%
GAGTATATGAATGGGATATG+AGG + chr4.1:17979469-17979488 None:intergenic 35.0%
GTATGCTTAGTGGTATGAAA+GGG - chr4.1:17978740-17978759 MS.gene36515:intron 35.0%
GTGGAAGTTAGTTGAATACT+CGG + chr4.1:17977999-17978018 None:intergenic 35.0%
GTTATTGCAATTGAAGATGC+AGG - chr4.1:17978622-17978641 MS.gene36515:intron 35.0%
GTTCGTTCATTCCAAAAAGA+TGG - chr4.1:17983328-17983347 MS.gene36515:CDS 35.0%
GTTTCTATTGAAAACGACGT+CGG + chr4.1:17978228-17978247 None:intergenic 35.0%
TAATGGTTACAGGAGATAAC+TGG - chr4.1:17982781-17982800 MS.gene36515:CDS 35.0%
TATCTGACTCAAGACTGTAT+CGG + chr4.1:17980289-17980308 None:intergenic 35.0%
TATGCTTAGTGGTATGAAAG+GGG - chr4.1:17978741-17978760 MS.gene36515:intron 35.0%
TCCAAACGATTGCTTATTTG+AGG - chr4.1:17982533-17982552 MS.gene36515:intron 35.0%
TCCTCAAATAAGCAATCGTT+TGG + chr4.1:17982537-17982556 None:intergenic 35.0%
TCTTCTTTGCTTATCACGTT+TGG + chr4.1:17978598-17978617 None:intergenic 35.0%
TGAAAAACAAAATTGAGCCG+TGG - chr4.1:17982973-17982992 MS.gene36515:CDS 35.0%
TGGAGAATTTCTTAAACTGG+TGG - chr4.1:17981905-17981924 MS.gene36515:CDS 35.0%
TGGTACGGCAATAATATTGT+AGG + chr4.1:17983566-17983585 None:intergenic 35.0%
TTACATCAGCAGAATCAGAA+AGG + chr4.1:17979170-17979189 None:intergenic 35.0%
TTATCTCCTGTAACCATTAC+AGG + chr4.1:17982780-17982799 None:intergenic 35.0%
TTGGGCAGATATTGATGTTA+TGG - chr4.1:17983217-17983236 MS.gene36515:CDS 35.0%
TTTCAATAGAAACCTCGTCA+AGG - chr4.1:17978235-17978254 MS.gene36515:CDS 35.0%
! AAACTTTTGAATGGGAGCTT+TGG + chr4.1:17980340-17980359 None:intergenic 35.0%
! AACATCTTTTGCATGGAACA+TGG - chr4.1:17982930-17982949 MS.gene36515:CDS 35.0%
! AAGGAATATGTTTTGTGGAG+AGG - chr4.1:17982450-17982469 MS.gene36515:intron 35.0%
! AGGAATATGTTTTGTGGAGA+GGG - chr4.1:17982451-17982470 MS.gene36515:intron 35.0%
! AGTGTCATTCAATTTGGGAT+TGG - chr4.1:17979550-17979569 MS.gene36515:intron 35.0%
! CGTTATTACTTTGGAGATGT+GGG - chr4.1:17979488-17979507 MS.gene36515:CDS 35.0%
! CTGCCTACATTGATAGTATT+GGG - chr4.1:17980447-17980466 MS.gene36515:intron 35.0%
! CTGCTTTAAACTCAAACCTT+AGG - chr4.1:17979122-17979141 MS.gene36515:CDS 35.0%
! CTTGAGAAGAGTATAGAAAG+AGG - chr4.1:17980504-17980523 MS.gene36515:intron 35.0%
! GAAAACCAACATCTTTTGCA+TGG - chr4.1:17982923-17982942 MS.gene36515:CDS 35.0%
! GAGTTCTACTAGCTTCTTAA+TGG + chr4.1:17979809-17979828 None:intergenic 35.0%
! GATCTAGAACTAAGAACTTG+AGG + chr4.1:17978820-17978839 None:intergenic 35.0%
! TAACTCAGGTACCATTCTTT+TGG - chr4.1:17981401-17981420 MS.gene36515:CDS 35.0%
! TATTTGGAATGTCTTGCCAA+GGG - chr4.1:17979769-17979788 MS.gene36515:intron 35.0%
! TCGTTATTACTTTGGAGATG+TGG - chr4.1:17979487-17979506 MS.gene36515:CDS 35.0%
! TCTATTTCTCTTTCTTCCAC+AGG + chr4.1:17980054-17980073 None:intergenic 35.0%
! TGAGAGAGTATATAAAGAGG+AGG - chr4.1:17980713-17980732 MS.gene36515:intron 35.0%
! TGGTGAGTGTCATTCAATTT+GGG - chr4.1:17979545-17979564 MS.gene36515:intron 35.0%
! TTGACACTATTGTGTTGGTA+AGG - chr4.1:17981473-17981492 MS.gene36515:CDS 35.0%
! TTGGTGAGTGTCATTCAATT+TGG - chr4.1:17979544-17979563 MS.gene36515:intron 35.0%
!! AAATGGAAGTATTTCCCACT+AGG + chr4.1:17980952-17980971 None:intergenic 35.0%
!! AGTATTGATTGGAGTCTTAG+GGG - chr4.1:17982689-17982708 MS.gene36515:intron 35.0%
!! AGTTCTTAGTTCTAGATCGT+TGG - chr4.1:17978822-17978841 MS.gene36515:intron 35.0%
!! CTTTGGTAGCTTTAATGTGA+AGG + chr4.1:17980260-17980279 None:intergenic 35.0%
!! GAGTATTGATTGGAGTCTTA+GGG - chr4.1:17982688-17982707 MS.gene36515:intron 35.0%
!! TTAGGCCCCAAATTTTAACA+TGG - chr4.1:17980567-17980586 MS.gene36515:intron 35.0%
!!! CCACCCTGATTTTAATTCAT+TGG + chr4.1:17982308-17982327 None:intergenic 35.0%
!!! CGGTTTTTTAAGGATGAGTT+AGG - chr4.1:17980755-17980774 MS.gene36515:intron 35.0%
!!! GCAAAAGATGTTGGTTTTCT+AGG + chr4.1:17982922-17982941 None:intergenic 35.0%
!!! GTTTTGGAAAGTATGCTTAG+TGG - chr4.1:17978730-17978749 MS.gene36515:intron 35.0%
AAATTACCCCCATGAAGAAG+AGG + chr4.1:17979444-17979463 None:intergenic 40.0%
AACAAAATTGAGCCGTGGAT+AGG - chr4.1:17982978-17982997 MS.gene36515:CDS 40.0%
AACCAATCATCCATGAGGAA+AGG + chr4.1:17979514-17979533 None:intergenic 40.0%
AAGACAGGAACTCTAACTCA+GGG - chr4.1:17981837-17981856 MS.gene36515:intron 40.0%
AAGCAGAGAGTAACCATCAT+TGG + chr4.1:17981949-17981968 None:intergenic 40.0%
AAGGACACCATGCAAATTGA+TGG + chr4.1:17980241-17980260 None:intergenic 40.0%
AATCCAAAGCTTGGAGAAAG+AGG - chr4.1:17980841-17980860 MS.gene36515:intron 40.0%
AATTACCCCCATGAAGAAGA+GGG + chr4.1:17979443-17979462 None:intergenic 40.0%
ACAAAATTGAGCCGTGGATA+GGG - chr4.1:17982979-17982998 MS.gene36515:CDS 40.0%
ACAACCAATAAAGCTGTTGC+AGG + chr4.1:17979835-17979854 None:intergenic 40.0%
ACTTCAACCAATCATCCATG+AGG + chr4.1:17979519-17979538 None:intergenic 40.0%
AGCAGAGAGTAACCATCATT+GGG + chr4.1:17981948-17981967 None:intergenic 40.0%
AGCTGAGATCTTACATGAAC+CGG - chr4.1:17978399-17978418 MS.gene36515:CDS 40.0%
ATCAATGCATCTGTCATTGG+AGG - chr4.1:17980213-17980232 MS.gene36515:intron 40.0%
ATCAGAGCTTGTCGAATTCA+AGG - chr4.1:17980591-17980610 MS.gene36515:intron 40.0%
ATCAGCAGAATCAGAAAGGA+TGG + chr4.1:17979166-17979185 None:intergenic 40.0%
ATCCTTAGAAAGAGCTCAGA+TGG - chr4.1:17981794-17981813 MS.gene36515:intron 40.0%
ATTAGCGTTAAACCTTGACG+AGG + chr4.1:17978250-17978269 None:intergenic 40.0%
ATTTACATAACTTGAGCCCC+AGG + chr4.1:17980151-17980170 None:intergenic 40.0%
CACAATGAGTTGCAAAGAGT+CGG - chr4.1:17981098-17981117 MS.gene36515:intron 40.0%
CAGAGAGTTCGTCTATGTTT+CGG - chr4.1:17978929-17978948 MS.gene36515:CDS 40.0%
CAGTGAAGGAAATAAAACCC+CGG + chr4.1:17983596-17983615 None:intergenic 40.0%
CATCACCGGAGTAAAAAAAG+CGG - chr4.1:17978531-17978550 MS.gene36515:intron 40.0%
CATTCTACACTAACACCCTA+AGG + chr4.1:17979141-17979160 None:intergenic 40.0%
CCAATACTATCAATGTAGGC+AGG + chr4.1:17980449-17980468 None:intergenic 40.0%
CCGTGGAGAATTTCTTAAAC+TGG - chr4.1:17981902-17981921 MS.gene36515:CDS 40.0%
CTCATTGTCAAAAAGGTGGA+AGG + chr4.1:17982061-17982080 None:intergenic 40.0%
CTTGAAAACGAGACCAGTTA+TGG + chr4.1:17983045-17983064 None:intergenic 40.0%
GAAGTATGTTCTGATCAGGT+TGG - chr4.1:17982555-17982574 MS.gene36515:intron 40.0%
GACACATTAAAAGTTCTGCC+TGG - chr4.1:17980096-17980115 MS.gene36515:CDS 40.0%
GAGATCAATGCATCTGTCAT+TGG - chr4.1:17980210-17980229 MS.gene36515:intron 40.0%
GCTTTCAGAGCTCTTAGAAA+TGG - chr4.1:17979592-17979611 MS.gene36515:intron 40.0%
GGCAATAATATTGTAGGCCA+TGG + chr4.1:17983560-17983579 None:intergenic 40.0%
GGTAGTATAGTTGCAATGGT+GGG - chr4.1:17983349-17983368 MS.gene36515:CDS 40.0%
GGTTGTAGGTGTTTGTTCTT+TGG - chr4.1:17978696-17978715 MS.gene36515:intron 40.0%
TAAACCGGTTGGAGATAGTA+CGG - chr4.1:17978435-17978454 MS.gene36515:CDS 40.0%
TAAGACAGGAACTCTAACTC+AGG - chr4.1:17981836-17981855 MS.gene36515:intron 40.0%
TAGAAGCCATTCTCGCATAA+GGG + chr4.1:17978900-17978919 None:intergenic 40.0%
TCAGAGCTTGTCGAATTCAA+GGG - chr4.1:17980592-17980611 MS.gene36515:intron 40.0%
TCTGTTTGTGCTCTTCTGTA+TGG - chr4.1:17979670-17979689 MS.gene36515:intron 40.0%
TGAGCTCATTGTCAAAAAGG+TGG + chr4.1:17982065-17982084 None:intergenic 40.0%
TGCGTATGCGACAATACAAA+AGG + chr4.1:17981983-17982002 None:intergenic 40.0%
TGGAGCATAAAATTCTGTGG+AGG + chr4.1:17979195-17979214 None:intergenic 40.0%
TGGTAGTATAGTTGCAATGG+TGG - chr4.1:17983348-17983367 MS.gene36515:CDS 40.0%
TGTAGGTGTTTGTTCTTTGG+TGG - chr4.1:17978699-17978718 MS.gene36515:intron 40.0%
TTAGAAGCCATTCTCGCATA+AGG + chr4.1:17978901-17978920 None:intergenic 40.0%
! AGAGTCTTATCTATCCGATG+TGG + chr4.1:17980486-17980505 None:intergenic 40.0%
! ATTTGGAATGTCTTGCCAAG+GGG - chr4.1:17979770-17979789 MS.gene36515:intron 40.0%
! CATGGATGATTGGTTGAAGT+GGG - chr4.1:17979519-17979538 MS.gene36515:intron 40.0%
! CCTGCCTACATTGATAGTAT+TGG - chr4.1:17980446-17980465 MS.gene36515:intron 40.0%
! GAGAAGAGTATAGAAAGAGG+AGG - chr4.1:17980507-17980526 MS.gene36515:intron 40.0%
! GAGTCTTATCTATCCGATGT+GGG + chr4.1:17980485-17980504 None:intergenic 40.0%
! GTAAATGAGAGTATGGTGAC+TGG - chr4.1:17980165-17980184 MS.gene36515:intron 40.0%
! GTATTTGGAATGTCTTGCCA+AGG - chr4.1:17979768-17979787 MS.gene36515:intron 40.0%
! GTCACTAGGTTGAATAAGCA+AGG + chr4.1:17980079-17980098 None:intergenic 40.0%
! TCATGGATGATTGGTTGAAG+TGG - chr4.1:17979518-17979537 MS.gene36515:intron 40.0%
! TGAGGAAGTATGTTCTGATC+AGG - chr4.1:17982551-17982570 MS.gene36515:intron 40.0%
! TTACATGAACCGGTTTCAAC+CGG - chr4.1:17978409-17978428 MS.gene36515:CDS 40.0%
! TTGTTCTTTGGTGGATGCAA+GGG - chr4.1:17978708-17978727 MS.gene36515:intron 40.0%
! TTTGTTCTTTGGTGGATGCA+AGG - chr4.1:17978707-17978726 MS.gene36515:intron 40.0%
!! ATGGATGTCCTTGTTGCTTT+GGG - chr4.1:17979625-17979644 MS.gene36515:intron 40.0%
!! CCTTAAAAAACCGGCTTGTA+AGG + chr4.1:17980748-17980767 None:intergenic 40.0%
!! CGGTTTTGTAAGGATGAGTT+AGG - chr4.1:17980549-17980568 MS.gene36515:intron 40.0%
!! GGAGTATTGATTGGAGTCTT+AGG - chr4.1:17982687-17982706 MS.gene36515:intron 40.0%
!! GTGGCTTTAGCTACTTCATT+AGG - chr4.1:17978556-17978575 MS.gene36515:intron 40.0%
!! TCTTTCTCCAAGCTTTGGAT+TGG + chr4.1:17980842-17980861 None:intergenic 40.0%
!! TGTAATATCGCTTTTGCCAG+CGG + chr4.1:17982223-17982242 None:intergenic 40.0%
!! TTGAAGAAAGTGCCAAGACT+GGG - chr4.1:17982646-17982665 MS.gene36515:intron 40.0%
!!! AGTCGGCATTTAGTTTTCCT+GGG - chr4.1:17981115-17981134 MS.gene36515:intron 40.0%
!!! CCTTACAAGCCGGTTTTTTA+AGG - chr4.1:17980745-17980764 MS.gene36515:intron 40.0%
!!! GAGATTGTTTTAGGGGTTGT+AGG - chr4.1:17978682-17978701 MS.gene36515:intron 40.0%
!!! GGGGTTTTATTTCCTTCACT+GGG - chr4.1:17983595-17983614 MS.gene36515:CDS 40.0%
!!! GTTGACGTCGTTTTTATCGT+AGG + chr4.1:17978072-17978091 None:intergenic 40.0%
!!! GTTTTGAAGTAAAGCAACGG+AGG + chr4.1:17978201-17978220 None:intergenic 40.0%
AAAAACGACGTCAACGACGA+CGG - chr4.1:17978077-17978096 MS.gene36515:CDS 45.0%
AATGGGAATCACGCCTGTAA+TGG - chr4.1:17982764-17982783 MS.gene36515:CDS 45.0%
ACATTGCTAGTCCATGTCAC+AGG + chr4.1:17980915-17980934 None:intergenic 45.0%
ACTCACACTAAGAAGCAAGC+TGG + chr4.1:17978965-17978984 None:intergenic 45.0%
ACTTCTCTGCTATTCCAGGA+AGG - chr4.1:17982344-17982363 MS.gene36515:intron 45.0%
AGATTCCCCTCTTCTTCATG+GGG - chr4.1:17979434-17979453 MS.gene36515:CDS 45.0%
AGGGACACATGTCTCATTAG+AGG - chr4.1:17982470-17982489 MS.gene36515:intron 45.0%
AGGTCGGCATTCAAGATGTT+AGG - chr4.1:17983272-17983291 MS.gene36515:CDS 45.0%
AGTCCCACATCGGATAGATA+AGG - chr4.1:17980479-17980498 MS.gene36515:intron 45.0%
ATACTCCATTGCACGCTACA+AGG + chr4.1:17982674-17982693 None:intergenic 45.0%
ATAGAGGGCCTCCAGAAAAT+GGG - chr4.1:17982747-17982766 MS.gene36515:intron 45.0%
ATCACGCCTGTAATGGTTAC+AGG - chr4.1:17982771-17982790 MS.gene36515:CDS 45.0%
ATCTATCCGATGTGGGACTT+GGG + chr4.1:17980478-17980497 None:intergenic 45.0%
ATTACCCCCATGAAGAAGAG+GGG + chr4.1:17979442-17979461 None:intergenic 45.0%
CAAAGCTTGGAGAAAGAGGA+GGG - chr4.1:17980845-17980864 MS.gene36515:intron 45.0%
CACCATCTGAGCTCTTTCTA+AGG + chr4.1:17981799-17981818 None:intergenic 45.0%
CAGATTCCCCTCTTCTTCAT+GGG - chr4.1:17979433-17979452 MS.gene36515:CDS 45.0%
CAGGTAACAATACCATCAGC+GGG + chr4.1:17980132-17980151 None:intergenic 45.0%
CATTCAAGATGTTAGGGCAG+AGG - chr4.1:17983279-17983298 MS.gene36515:CDS 45.0%
CATTGCTAGTCCATGTCACA+GGG + chr4.1:17980914-17980933 None:intergenic 45.0%
CCAGGTAACAATACCATCAG+CGG + chr4.1:17980133-17980152 None:intergenic 45.0%
CGAGTCTATACCTGTTTCGA+AGG - chr4.1:17980188-17980207 MS.gene36515:intron 45.0%
CGCTGATGGTATTGTTACCT+GGG - chr4.1:17980131-17980150 MS.gene36515:intron 45.0%
CTACCTGCAAGCCAAAAGAA+TGG + chr4.1:17981415-17981434 None:intergenic 45.0%
CTGTAGTTCCCAAAGCAACA+AGG + chr4.1:17979636-17979655 None:intergenic 45.0%
CTTCTCTGCTATTCCAGGAA+GGG - chr4.1:17982345-17982364 MS.gene36515:intron 45.0%
GAAAAACCCAAGTCCCACAT+CGG - chr4.1:17980469-17980488 MS.gene36515:intron 45.0%
GACTGTATCGGATCCTACTT+TGG + chr4.1:17980277-17980296 None:intergenic 45.0%
GATGAATGGCTGCCGAAAAA+TGG - chr4.1:17981627-17981646 MS.gene36515:CDS 45.0%
GCAGATGTTGGTATGGCAAT+TGG - chr4.1:17983406-17983425 MS.gene36515:intron 45.0%
GCTGATGGTATTGTTACCTG+GGG - chr4.1:17980132-17980151 MS.gene36515:intron 45.0%
GGTCGGCATTCAAGATGTTA+GGG - chr4.1:17983273-17983292 MS.gene36515:CDS 45.0%
GGTGTGCAGTGCATTATAGA+CGG - chr4.1:17982367-17982386 MS.gene36515:intron 45.0%
TAGAAGCCCTTATGCGAGAA+TGG - chr4.1:17978891-17978910 MS.gene36515:intron 45.0%
TATAGAGGGCCTCCAGAAAA+TGG - chr4.1:17982746-17982765 MS.gene36515:intron 45.0%
TATCTATCCGATGTGGGACT+TGG + chr4.1:17980479-17980498 None:intergenic 45.0%
TCAACGACGACGGAATTAAC+CGG - chr4.1:17978087-17978106 MS.gene36515:CDS 45.0%
TCAGACTTCTCTGCTATTCC+AGG - chr4.1:17982340-17982359 MS.gene36515:intron 45.0%
TCAGATTCCCCTCTTCTTCA+TGG - chr4.1:17979432-17979451 MS.gene36515:CDS 45.0%
TCTGTTGAATCCCTGTGACA+TGG - chr4.1:17980901-17980920 MS.gene36515:intron 45.0%
TGGAATAGCAGAGAAGTCTG+AGG + chr4.1:17982341-17982360 None:intergenic 45.0%
TTAGTGGTATGAAAGGGGTG+AGG - chr4.1:17978746-17978765 MS.gene36515:intron 45.0%
TTCAACGGAGTTAGAGCAAG+CGG + chr4.1:17978144-17978163 None:intergenic 45.0%
TTCTCTGCTATTCCAGGAAG+GGG - chr4.1:17982346-17982365 MS.gene36515:intron 45.0%
TTGGAGCATACCCAGATGAA+TGG - chr4.1:17981613-17981632 MS.gene36515:CDS 45.0%
TTGGTATGGCAATTGGAGCT+GGG - chr4.1:17983413-17983432 MS.gene36515:intron 45.0%
! AGAGCCTTATCTATCCGATG+TGG + chr4.1:17980693-17980712 None:intergenic 45.0%
! ATGGCGCTCTTACTGGATTT+TGG - chr4.1:17979689-17979708 MS.gene36515:intron 45.0%
! CACTCCTGCAACAGCTTTAT+TGG - chr4.1:17979828-17979847 MS.gene36515:CDS 45.0%
! CATGGATGTCCTTGTTGCTT+TGG - chr4.1:17979624-17979643 MS.gene36515:intron 45.0%
! CTTGGTGCGTGAATAGGTTT+AGG + chr4.1:17980621-17980640 None:intergenic 45.0%
! GAGCCTTATCTATCCGATGT+GGG + chr4.1:17980692-17980711 None:intergenic 45.0%
! GCATTGATCTCCTTCGAAAC+AGG + chr4.1:17980201-17980220 None:intergenic 45.0%
! GCGAGAATGGCTTCTAAAGA+TGG - chr4.1:17978904-17978923 MS.gene36515:intron 45.0%
! GTACTATCTCCAACCGGTTT+AGG + chr4.1:17978436-17978455 None:intergenic 45.0%
! TATAGACGGACAGCGTGTTT+TGG - chr4.1:17982381-17982400 MS.gene36515:intron 45.0%
! TGATTGGTTGAAGTGGGCAT+TGG - chr4.1:17979525-17979544 MS.gene36515:intron 45.0%
! TTTTCGGCAGCCATTCATCT+GGG + chr4.1:17981626-17981645 None:intergenic 45.0%
! TTTTCTAGATGGCAGACCTG+TGG - chr4.1:17980035-17980054 MS.gene36515:CDS 45.0%
!! AAAAACCGGCTTGTAAGGTG+AGG + chr4.1:17980743-17980762 None:intergenic 45.0%
!! AATGGGAGCTTTGGACATCT+GGG + chr4.1:17980331-17980350 None:intergenic 45.0%
!! ATAGTTGCAATGGTGGGTGA+CGG - chr4.1:17983355-17983374 MS.gene36515:CDS 45.0%
!! CCTTACAAAACCGGCTTGTA+AGG + chr4.1:17980542-17980561 None:intergenic 45.0%
!! CCTTACAAGCCGGTTTTGTA+AGG - chr4.1:17980539-17980558 MS.gene36515:intron 45.0%
!! CTTGAAGAAAGTGCCAAGAC+TGG - chr4.1:17982645-17982664 MS.gene36515:intron 45.0%
!! GCGTGCAATGGAGTATTGAT+TGG - chr4.1:17982678-17982697 MS.gene36515:intron 45.0%
!! GGAGGTACCATCAATTTGCA+TGG - chr4.1:17980231-17980250 MS.gene36515:intron 45.0%
!! GTAATATCGCTTTTGCCAGC+GGG + chr4.1:17982222-17982241 None:intergenic 45.0%
!! GTTCTGATCAGGTTGGTAAC+AGG - chr4.1:17982562-17982581 MS.gene36515:intron 45.0%
!! TGGAAGTATTTCCCACTAGG+CGG + chr4.1:17980949-17980968 None:intergenic 45.0%
!! TTTGGTGGATGCAAGGGTTT+TGG - chr4.1:17978714-17978733 MS.gene36515:intron 45.0%
!! TTTTTCGGCAGCCATTCATC+TGG + chr4.1:17981627-17981646 None:intergenic 45.0%
!!! CACCACCGCTTTTTTTACTC+CGG + chr4.1:17978539-17978558 None:intergenic 45.0%
!!! CGGGGTTTTATTTCCTTCAC+TGG - chr4.1:17983594-17983613 MS.gene36515:CDS 45.0%
!!! GAGTCGGCATTTAGTTTTCC+TGG - chr4.1:17981114-17981133 MS.gene36515:intron 45.0%
!!! GTACCATTCTTTTGGCTTGC+AGG - chr4.1:17981409-17981428 MS.gene36515:CDS 45.0%
!!! AATATATTTTATTTAAATTC+AGG - chr4.1:17982183-17982202 MS.gene36515:CDS 5.0%
AATAAAACCCCGGCAGCAAC+TGG + chr4.1:17983586-17983605 None:intergenic 50.0%
ACATCTGCAGCAGCTAATGC+AGG + chr4.1:17983394-17983413 None:intergenic 50.0%
ACCACCGTACTATCTCCAAC+CGG + chr4.1:17978442-17978461 None:intergenic 50.0%
AGAGGTTATGCCTGCAGGAA+AGG - chr4.1:17983297-17983316 MS.gene36515:CDS 50.0%
AGCTGCTGCAGATGTTGGTA+TGG - chr4.1:17983399-17983418 MS.gene36515:intron 50.0%
ATGCCCATGTGCACTTGGTT+TGG - chr4.1:17981701-17981720 MS.gene36515:intron 50.0%
ATTGCATGCCCATGTGCACT+TGG - chr4.1:17981696-17981715 MS.gene36515:intron 50.0%
CACCGGAGTAAAAAAAGCGG+TGG - chr4.1:17978534-17978553 MS.gene36515:intron 50.0%
CCAAAGCTTGGAGAAAGAGG+AGG - chr4.1:17980844-17980863 MS.gene36515:intron 50.0%
CCGCTGATGGTATTGTTACC+TGG - chr4.1:17980130-17980149 MS.gene36515:intron 50.0%
CCTCCTCTTTCTCCAAGCTT+TGG + chr4.1:17980847-17980866 None:intergenic 50.0%
CGACGGAATTAACCGGATTC+AGG - chr4.1:17978094-17978113 MS.gene36515:CDS 50.0%
CGGAGTAAAAAAAGCGGTGG+TGG - chr4.1:17978537-17978556 MS.gene36515:intron 50.0%
CGGATTCAGGTCAGAATCAC+CGG - chr4.1:17978107-17978126 MS.gene36515:CDS 50.0%
CGGTGATTCTGACCTGAATC+CGG + chr4.1:17978109-17978128 None:intergenic 50.0%
CTTCTGTATGGCGCTCTTAC+TGG - chr4.1:17979682-17979701 MS.gene36515:intron 50.0%
GATTCCCCTCTTCTTCATGG+GGG - chr4.1:17979435-17979454 MS.gene36515:CDS 50.0%
GCAATCCTCACCTTACAAGC+CGG - chr4.1:17980735-17980754 MS.gene36515:intron 50.0%
GCAATGCTCACCTTACAAGC+CGG - chr4.1:17980529-17980548 MS.gene36515:intron 50.0%
GCATTAGCTGCTGCAGATGT+TGG - chr4.1:17983394-17983413 MS.gene36515:intron 50.0%
GCGTGTGTGAATTCCGTTGA+AGG - chr4.1:17978496-17978515 MS.gene36515:intron 50.0%
GCTGAGGTAACTCCCAATGA+TGG - chr4.1:17981933-17981952 MS.gene36515:CDS 50.0%
GGAAGCTTGATTCCCAGTGA+AGG + chr4.1:17983610-17983629 None:intergenic 50.0%
GGCCTTTCCTCATGGATGAT+TGG - chr4.1:17979509-17979528 MS.gene36515:CDS 50.0%
GGCTTGAATTACACCGTCGA+CGG + chr4.1:17978180-17978199 None:intergenic 50.0%
GGGAATCAAGCTTCCACCAT+GGG - chr4.1:17983615-17983634 MS.gene36515:CDS 50.0%
GGTACAAAGATTCCCGCTGA+TGG - chr4.1:17980117-17980136 MS.gene36515:CDS 50.0%
GGTGCGTGAATAGGTTTAGG+CGG + chr4.1:17980618-17980637 None:intergenic 50.0%
GGTTTAGGTCCGGTTGAAAC+CGG + chr4.1:17978421-17978440 None:intergenic 50.0%
GGTTTCAACCGGACCTAAAC+CGG - chr4.1:17978420-17978439 MS.gene36515:CDS 50.0%
GTAAGGAGCTCCAACGATCA+GGG + chr4.1:17981207-17981226 None:intergenic 50.0%
GTCCATTCCTGCAAACACCT+TGG + chr4.1:17981883-17981902 None:intergenic 50.0%
GTGGTTGGACAGTTCACGAT+CGG - chr4.1:17978457-17978476 MS.gene36515:intron 50.0%
GTTGGAGATAGTACGGTGGT+TGG - chr4.1:17978442-17978461 MS.gene36515:CDS 50.0%
GTTGGTATGGCAATTGGAGC+TGG - chr4.1:17983412-17983431 MS.gene36515:intron 50.0%
TAAACTGGTGGCTTCTGCTG+AGG - chr4.1:17981917-17981936 MS.gene36515:CDS 50.0%
TAAGGAGCTCCAACGATCAG+GGG + chr4.1:17981206-17981225 None:intergenic 50.0%
TCAGCGGGAATCTTTGTACC+AGG + chr4.1:17980117-17980136 None:intergenic 50.0%
TCATGGTGGCAACAGGTGTT+GGG - chr4.1:17981739-17981758 MS.gene36515:intron 50.0%
TCGCCAAACCAAGTGCACAT+GGG + chr4.1:17981707-17981726 None:intergenic 50.0%
TGAAAGGGGTGAGGCAGTTT+CGG - chr4.1:17978755-17978774 MS.gene36515:intron 50.0%
TGGGAATCAAGCTTCCACCA+TGG - chr4.1:17983614-17983633 MS.gene36515:CDS 50.0%
TGTAAGGAGCTCCAACGATC+AGG + chr4.1:17981208-17981227 None:intergenic 50.0%
! AAGTATTGTGGCCGTGCTCT+TGG - chr4.1:17980371-17980390 MS.gene36515:intron 50.0%
! ATCTCCAACCGGTTTAGGTC+CGG + chr4.1:17978431-17978450 None:intergenic 50.0%
! ATTTTCCAGAACAGCAGCCC+AGG + chr4.1:17981135-17981154 None:intergenic 50.0%
! CAGGCGTGATTCCCATTTTC+TGG + chr4.1:17982761-17982780 None:intergenic 50.0%
! GAAGTATTTCCCACTAGGCG+GGG + chr4.1:17980947-17980966 None:intergenic 50.0%
! GCGTGATTCCCATTTTCTGG+AGG + chr4.1:17982758-17982777 None:intergenic 50.0%
! TCTGTTGCCAAGGTGTTTGC+AGG - chr4.1:17981873-17981892 MS.gene36515:intron 50.0%
! TGCCAAGGTGTTTGCAGGAA+TGG - chr4.1:17981878-17981897 MS.gene36515:CDS 50.0%
!! ACAGGTGTTGGGGCTAACAA+TGG - chr4.1:17981750-17981769 MS.gene36515:intron 50.0%
!! GAATGGGAGCTTTGGACATC+TGG + chr4.1:17980332-17980351 None:intergenic 50.0%
!! GGAAGTATTTCCCACTAGGC+GGG + chr4.1:17980948-17980967 None:intergenic 50.0%
!! TTTGGGCTTGGTGCGTGAAT+AGG + chr4.1:17980627-17980646 None:intergenic 50.0%
AACTGCTCGAGCTGTTGCCA+AGG - chr4.1:17982806-17982825 MS.gene36515:CDS 55.0%
ACCACATCAGCCTTTCCTGC+AGG + chr4.1:17983310-17983329 None:intergenic 55.0%
ACCGGTTGGAGATAGTACGG+TGG - chr4.1:17978438-17978457 MS.gene36515:CDS 55.0%
ACTGCTGTCATGGTGGCAAC+AGG - chr4.1:17981732-17981751 MS.gene36515:intron 55.0%
AGCCACTGTCTCTGTTGCCA+AGG - chr4.1:17981863-17981882 MS.gene36515:intron 55.0%
AGCTCCAACGATCAGGGGTA+AGG + chr4.1:17981201-17981220 None:intergenic 55.0%
AGGAAGCTGCTGGTGGAAAG+TGG - chr4.1:17982582-17982601 MS.gene36515:intron 55.0%
AGGTATACTGCTGGGGCTCT+TGG - chr4.1:17981594-17981613 MS.gene36515:CDS 55.0%
ATGCATGCACCAGCAACCCA+TGG + chr4.1:17983634-17983653 None:intergenic 55.0%
ATTGCCGTACCAGTTGCTGC+CGG - chr4.1:17983574-17983593 MS.gene36515:CDS 55.0%
ATTGTGGCCGTGCTCTTGGA+TGG - chr4.1:17980375-17980394 MS.gene36515:intron 55.0%
CACCTTGGCAACAGAGACAG+TGG + chr4.1:17981868-17981887 None:intergenic 55.0%
CGCTACAAGGATCCCAGTCT+TGG + chr4.1:17982661-17982680 None:intergenic 55.0%
GACACCAACTGCTGTCATGG+TGG - chr4.1:17981725-17981744 MS.gene36515:intron 55.0%
GAGATGTGGGCCTTTCCTCA+TGG - chr4.1:17979501-17979520 MS.gene36515:CDS 55.0%
GATAGTGTTCCCCGCCTAGT+GGG - chr4.1:17980935-17980954 MS.gene36515:intron 55.0%
GATCGGCGGTATGACATGTG+CGG - chr4.1:17978474-17978493 MS.gene36515:intron 55.0%
GATGCCTTACCCCTGATCGT+TGG - chr4.1:17981194-17981213 MS.gene36515:intron 55.0%
GCGAACATCTTCGAGATCGC+CGG + chr4.1:17978039-17978058 None:intergenic 55.0%
GGACATGAGAGCGGCTTCAA+CGG + chr4.1:17978159-17978178 None:intergenic 55.0%
GGCATCAGATGTCTTCCCCT+TGG + chr4.1:17979788-17979807 None:intergenic 55.0%
GGGATCCTTGTAGCGTGCAA+TGG - chr4.1:17982666-17982685 MS.gene36515:intron 55.0%
GTCATGGTGGCAACAGGTGT+TGG - chr4.1:17981738-17981757 MS.gene36515:intron 55.0%
GTCGCCAAACCAAGTGCACA+TGG + chr4.1:17981708-17981727 None:intergenic 55.0%
GTGTTTGCAGGAATGGACCG+TGG - chr4.1:17981885-17981904 MS.gene36515:CDS 55.0%
GTTGCCACCATGACAGCAGT+TGG + chr4.1:17981732-17981751 None:intergenic 55.0%
GTTGGACAGTTCACGATCGG+CGG - chr4.1:17978460-17978479 MS.gene36515:intron 55.0%
TCAACCGGACCTAAACCGGT+TGG - chr4.1:17978424-17978443 MS.gene36515:CDS 55.0%
TGGTAACAGGAAGCTGCTGG+TGG - chr4.1:17982575-17982594 MS.gene36515:intron 55.0%
! AAGCTTCCACCATGGGTTGC+TGG - chr4.1:17983622-17983641 MS.gene36515:CDS 55.0%
! ATGGGTTGCTGGTGCATGCA+TGG - chr4.1:17983633-17983652 MS.gene36515:CDS 55.0%
! CATGGTGGCAACAGGTGTTG+GGG - chr4.1:17981740-17981759 MS.gene36515:intron 55.0%
! GTTTTCCTGGGCTGCTGTTC+TGG - chr4.1:17981127-17981146 MS.gene36515:intron 55.0%
! TGATAGTGTTCCCCGCCTAG+TGG - chr4.1:17980934-17980953 MS.gene36515:intron 55.0%
!! CACCAAGCCCAAAGAGTGCT+GGG - chr4.1:17980634-17980653 MS.gene36515:intron 55.0%
!! GGTTGGTAACAGGAAGCTGC+TGG - chr4.1:17982572-17982591 MS.gene36515:intron 55.0%
AACCCCGGCAGCAACTGGTA+CGG + chr4.1:17983581-17983600 None:intergenic 60.0%
ACCGTCGACGGACATGAGAG+CGG + chr4.1:17978168-17978187 None:intergenic 60.0%
AGGGCAGAGGTTATGCCTGC+AGG - chr4.1:17983292-17983311 MS.gene36515:CDS 60.0%
ATGCACTGCACACCCCTTCC+TGG + chr4.1:17982361-17982380 None:intergenic 60.0%
CAACTAACTTCCACCGGCGC+CGG - chr4.1:17978005-17978024 MS.gene36515:CDS 60.0%
CATGCACCAGCAACCCATGG+TGG + chr4.1:17983631-17983650 None:intergenic 60.0%
CCTCACGCCCAGCACTCTTT+GGG + chr4.1:17980644-17980663 None:intergenic 60.0%
GCCTGCAGGAAAGGCTGATG+TGG - chr4.1:17983306-17983325 MS.gene36515:CDS 60.0%
GGCGACACCAACTGCTGTCA+TGG - chr4.1:17981722-17981741 MS.gene36515:intron 60.0%
TGCTCGAGCTGTTGCCAAGG+AGG - chr4.1:17982809-17982828 MS.gene36515:CDS 60.0%
TTGCCGTACCAGTTGCTGCC+GGG - chr4.1:17983575-17983594 MS.gene36515:CDS 60.0%
! GCACCAAGCCCAAAGAGTGC+TGG - chr4.1:17980633-17980652 MS.gene36515:intron 60.0%
!! AAAGAGTGCTGGGCGTGAGG+GGG - chr4.1:17980644-17980663 MS.gene36515:intron 60.0%
!! CAAAGAGTGCTGGGCGTGAG+GGG - chr4.1:17980643-17980662 MS.gene36515:intron 60.0%
!! CCAAAGAGTGCTGGGCGTGA+GGG - chr4.1:17980642-17980661 MS.gene36515:intron 60.0%
CCCTCACGCCCAGCACTCTT+TGG + chr4.1:17980645-17980664 None:intergenic 65.0%
CGCCCAGCACTCTTTGGGCT+TGG + chr4.1:17980639-17980658 None:intergenic 65.0%
GAGATCGCCGGAGTCATCGC+CGG + chr4.1:17978027-17978046 None:intergenic 65.0%
GCAAGCGGCGCATGTCATGC+CGG + chr4.1:17978129-17978148 None:intergenic 65.0%
GCCGCTCTCATGTCCGTCGA+CGG - chr4.1:17978164-17978183 MS.gene36515:CDS 65.0%
GGCTAGCAGTGAACACCCGC+TGG - chr4.1:17982204-17982223 MS.gene36515:CDS 65.0%
TGCCGTACCAGTTGCTGCCG+GGG - chr4.1:17983576-17983595 MS.gene36515:CDS 65.0%
! GGGCGTGAGGGGGGTGTATT+GGG - chr4.1:17980654-17980673 MS.gene36515:intron 65.0%
! TGGGCGTGAGGGGGGTGTAT+TGG - chr4.1:17980653-17980672 MS.gene36515:intron 65.0%
!! AAGAGTGCTGGGCGTGAGGG+GGG - chr4.1:17980645-17980664 MS.gene36515:intron 65.0%
!! CCCAAAGAGTGCTGGGCGTG+AGG - chr4.1:17980641-17980660 MS.gene36515:intron 65.0%
!! ACCGGCGCCGGCGATGACTC+CGG - chr4.1:17978017-17978036 MS.gene36515:CDS 75.0%
! GCCGGAGTCATCGCCGGCGC+CGG + chr4.1:17978021-17978040 None:intergenic 80.0%
!! GGAGTCATCGCCGGCGCCGG+TGG + chr4.1:17978018-17978037 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 17977990 17983750 17977990 ID=MS.gene36515
chr4.1 mRNA 17977990 17983750 17977990 ID=MS.gene36515.t1;Parent=MS.gene36515
chr4.1 exon 17983484 17983750 17983484 ID=MS.gene36515.t1.exon1;Parent=MS.gene36515.t1
chr4.1 CDS 17983484 17983750 17983484 ID=cds.MS.gene36515.t1;Parent=MS.gene36515.t1
chr4.1 exon 17982762 17983382 17982762 ID=MS.gene36515.t1.exon2;Parent=MS.gene36515.t1
chr4.1 CDS 17982762 17983382 17982762 ID=cds.MS.gene36515.t1;Parent=MS.gene36515.t1
chr4.1 exon 17981875 17982304 17981875 ID=MS.gene36515.t1.exon3;Parent=MS.gene36515.t1
chr4.1 CDS 17981875 17982304 17981875 ID=cds.MS.gene36515.t1;Parent=MS.gene36515.t1
chr4.1 exon 17981372 17981697 17981372 ID=MS.gene36515.t1.exon4;Parent=MS.gene36515.t1
chr4.1 CDS 17981372 17981697 17981372 ID=cds.MS.gene36515.t1;Parent=MS.gene36515.t1
chr4.1 exon 17980251 17980309 17980251 ID=MS.gene36515.t1.exon5;Parent=MS.gene36515.t1
chr4.1 CDS 17980251 17980309 17980251 ID=cds.MS.gene36515.t1;Parent=MS.gene36515.t1
chr4.1 exon 17979802 17980144 17979802 ID=MS.gene36515.t1.exon6;Parent=MS.gene36515.t1
chr4.1 CDS 17979802 17980144 17979802 ID=cds.MS.gene36515.t1;Parent=MS.gene36515.t1
chr4.1 exon 17979338 17979535 17979338 ID=MS.gene36515.t1.exon7;Parent=MS.gene36515.t1
chr4.1 CDS 17979338 17979535 17979338 ID=cds.MS.gene36515.t1;Parent=MS.gene36515.t1
chr4.1 exon 17978910 17979167 17978910 ID=MS.gene36515.t1.exon8;Parent=MS.gene36515.t1
chr4.1 CDS 17978910 17979167 17978910 ID=cds.MS.gene36515.t1;Parent=MS.gene36515.t1
chr4.1 exon 17977990 17978466 17977990 ID=MS.gene36515.t1.exon9;Parent=MS.gene36515.t1
chr4.1 CDS 17977990 17978466 17977990 ID=cds.MS.gene36515.t1;Parent=MS.gene36515.t1
Gene Sequence

>MS.gene36515

ATGGCGCCGAGTATTCAACTAACTTCCACCGGCGCCGGCGATGACTCCGGCGATCTCGAAGATGTTCGCCTACTAGATTCCTACGATAAAAACGACGTCAACGACGACGGAATTAACCGGATTCAGGTCAGAATCACCGGCATGACATGCGCCGCTTGCTCTAACTCCGTTGAAGCCGCTCTCATGTCCGTCGACGGTGTAATTCAAGCCTCCGTTGCTTTACTTCAAAACAAAGCCGACGTCGTTTTCAATAGAAACCTCGTCAAGGTTTAACGCTAATTTTCACTTTTTTGTTTTTATTTTTTGAAATTGTGAAAGTGTTTGTTTAGTTACTGATTTTGGAAATTGTTGAATTATTTAAACCCTAGGATGAAGATATTAAGAATGCAATTGAAGATGCAGGTTTTGAAGCTGAGATCTTACATGAACCGGTTTCAACCGGACCTAAACCGGTTGGAGATAGTACGGTGGTTGGACAGTTCACGATCGGCGGTATGACATGTGCGGCGTGTGTGAATTCCGTTGAAGGAATTTTAAATGACATCACCGGAGTAAAAAAAGCGGTGGTGGCTTTAGCTACTTCATTAGGTGAAGTTGAGTATGATCCAAACGTGATAAGCAAAGAAGATATTGTTATTGCAATTGAAGATGCAGGTTTTGAAGCTTCTTTTGTTCAGAGTACTAGTCAAGATGAGATTGTTTTAGGGGTTGTAGGTGTTTGTTCTTTGGTGGATGCAAGGGTTTTGGAAAGTATGCTTAGTGGTATGAAAGGGGTGAGGCAGTTTCGGTTTGATCCTTTGTTGAGTGAGCTTAATGTTGTTTTTGATCCTCAAGTTCTTAGTTCTAGATCGTTGGTTGATGAGATTCGCGTAGTTAGTAATGACAAATATACTTTGCATGTTAGAAGCCCTTATGCGAGAATGGCTTCTAAAGATGGTTCAGAGAGTTCGTCTATGTTTCGGCTTTTTATTACCAGCTTGCTTCTTAGTGTGAGTATCCCTTTAATCTATAGCCATATTTGTTCTTGTTATTTTGGTTTCATTGTGCTTTATTTGTTTGATCACATTATTTTGCTTCTTATTGTAGATGTAGAGAGATAGTGAGTAGAGTTATGAAATCATGTAGTTAGTAACTGCTTTAAACTCAAACCTTAGGGTGTTAGTGTAGAATGAGCCATCCTTTCTGATTCTGCTGATGTAAGACCTCCACAGAATTTTATGCTCCATAAGGGTTGCATTAGTTCATACTCCATACAGAAATTTCATCTAACGGAAGTAGTACTGCGTCATCGTTTTTTTTATAGAAACATGTAACTGAAGCTAAACAAGACTCTTCATTTTTAGAATTTGAGTGCATGTCTTATGTTATTGTCCCTTATTTTGTTTAGTTTCTTGTTTATTCTTTCCATGCTTTTGCATTGATTTGTGTTTGTTGCATTTGTCTCAGATTCCCCTCTTCTTCATGGGGGTAATTTGTCCTCATATCCCATTCATATACTCGTTATTACTTTGGAGATGTGGGCCTTTCCTCATGGATGATTGGTTGAAGTGGGCATTGGTGAGTGTCATTCAATTTGGGATTGGAAAGCGCTTCTACATAGCAGCTTTCAGAGCTCTTAGAAATGGTTCAACAAACATGGATGTCCTTGTTGCTTTGGGAACTACAGCTTCATATGTTTATTCTGTTTGTGCTCTTCTGTATGGCGCTCTTACTGGATTTTGGTCTACAACATACTTTGAAACAAGTGCTATGCTTATAACATTTGTATTGTTGGGAAAGTATTTGGAATGTCTTGCCAAGGGGAAGACATCTGATGCCATTAAGAAGCTAGTAGAACTCACTCCTGCAACAGCTTTATTGGTTGTTAAAGACAAAGGTGCTTGTCACTTTGATTTTATGTGCTTTGTTTTCTTAAGAAAATGGAGGGGAAACAGCTTATGTCCTGATTGTCTTATATTTAGGTTGAAATTAGTGATGGTTATTTAATTTATCATCTTGATTTCATCATAACATCAAATTATAACTTGCCAATATTTTTTCTTTTCTTTTCTAGATGGCAGACCTGTGGAAGAAAGAGAAATAGATTCCTTGCTTATTCAACCTAGTGACACATTAAAAGTTCTGCCTGGTACAAAGATTCCCGCTGATGGTATTGTTACCTGGGGCTCAAGTTATGTAAATGAGAGTATGGTGACTGGCGAGTCTATACCTGTTTCGAAGGAGATCAATGCATCTGTCATTGGAGGTACCATCAATTTGCATGGTGTCCTTCACATTAAAGCTACCAAAGTAGGATCCGATACAGTCTTGAGTCAGATAATTAATTTGGTCGAGACGGCCCAGATGTCCAAAGCTCCCATTCAAAAGTTTGCTGATTATGTAAGTATTGTGGCCGTGCTCTTGGATGGTTTTTATGTTCTGTTATTGTTAAATGATAGTGTAAGCATTTTTTGTGCCCTGCCTACATTGATAGTATTGGGAAAAACCCAAGTCCCACATCGGATAGATAAGACTCTTGAGAAGAGTATAGAAAGAGGAGGCAATGCTCACCTTACAAGCCGGTTTTGTAAGGATGAGTTAGGCCCCAAATTTTAACATGGTATCAGAGCTTGTCGAATTCAAGGGCCGCCTAAACCTATTCACGCACCAAGCCCAAAGAGTGCTGGGCGTGAGGGGGGTGTATTGGGAAAAACCCAAGTCCCACATCGGATAGATAAGGCTCTTGAGAGAGTATATAAAGAGGAGGCAATCCTCACCTTACAAGCCGGTTTTTTAAGGATGAGTTAGGCCCCAAATTTCAATAGATAGTGTAAGCATTTTTTGTGCACTGCCTACATTGCATAATATAGCCAATCCAAAGCTTGGAGAAAGAGGAGGGTTGTGATTAAGAAGTCTGCACCTAATATAAAACTCTGTTGAATCCCTGTGACATGGACTAGCAATGTGATAGTGTTCCCCGCCTAGTGGGAAATACTTCCATTTTTAGTTATTGCTGGTGTACCATGTATGCATTTTTACTTAGTTTGGATTCCATTCTTTGTGGTAAAGAAAGTTTTAGCTTGTGAATCAGTTTTGAAACTAGTGAAATGTTTTCTTGTAACTAAAAGACACAATGAGTTGCAAAGAGTCGGCATTTAGTTTTCCTGGGCTGCTGTTCTGGAAAATGAAAATCTGAGTAGTCCCGTAGAGTCAGAACAATATTTTGATGCCTTACCCCTGATCGTTGGAGCTCCTTACATAGAATTATTCATAAATTTTAATTGTTATTGATTCCAATTATTTCAGGTTTAGGCTTCAGCCATAATTCAAACTCACGTTTATTTGCTTGCACATAATATTCTAATAGTAGTCAGTATATTAACTTTATAAGCTTGCTAGTTGATTGCCACAAATGACTTAAGATACATTAACTAACTCAGGTACCATTCTTTTGGCTTGCAGGTAGCAAGCATATTTGTTCCTACAATTGTAGCTCTGTCATTATTGACACTATTGTGTTGGTAAGGTTTTTTTGACTAGTTTTTGCATATTGATAAAATTTGATTTCTAATGCGTGATTGAAATGCTTATCCTTACTTCTGTGTACATATTTTGTTTAAATTTTAGGTATACTGCTGGGGCTCTTGGAGCATACCCAGATGAATGGCTGCCGAAAAATGGAAACCACTTTGTTTTTGCCCTTATGTTTTCTATATCTGTTGTGGTGATTGCATGCCCATGTGCACTTGGTTTGGCGACACCAACTGCTGTCATGGTGGCAACAGGTGTTGGGGCTAACAATGGTGTGTTAATTAAAGGAGGAGAATCCTTAGAAAGAGCTCAGATGGTGAAGTACGTTATATTTGATAAGACAGGAACTCTAACTCAGGGTAAAGCCACTGTCTCTGTTGCCAAGGTGTTTGCAGGAATGGACCGTGGAGAATTTCTTAAACTGGTGGCTTCTGCTGAGGTAACTCCCAATGATGGTTACTCTCTGCTTCTCATTGTTTGCCTTTTGTATTGTCGCATACGCACAGTTTGAATCTAAACCCAGCTATAAAAGACATAAAACAATATTTTTCTAAATTTCCTTCCACCTTTTTGACAATGAGCTCAACTTTCCTAATAATGTTTTGGCATTTTATTTTATTTTTACCTTGCATTTCTATGATGCCTATTAGAGGAATCAACAGTATTTTTGTCAATTATTTTTTAATATATTTTATTTAAATTCAGGCTAGCAGTGAACACCCGCTGGCAAAAGCGATATTACAATATGCACGCCATTTTCACTTCTTTGATGAGTCCTCTCTTACCAATGGATCCCAAAATGATGCCAATGAATTAAAATCAGGGTGGCTTTATGATGCCTCAGACTTCTCTGCTATTCCAGGAAGGGGTGTGCAGTGCATTATAGACGGACAGCGTGTTTTGGTAAAATTTTTTTGGCTATTCTTGTATGATTGTTATTATCTTTAATGAAGGAATATGTTTTGTGGAGAGGGACACATGTCTCATTAGAGGAAGACTTTTCTTAAGAGTTGATAAAGGTGTTTTTTATTTGTCCAAACGATTGCTTATTTGAGGAAGTATGTTCTGATCAGGTTGGTAACAGGAAGCTGCTGGTGGAAAGTGGCATAAGTATTTCTACTGAAGTGGAAAACTTTGTTGTAGAGCTTGAAGAAAGTGCCAAGACTGGGATCCTTGTAGCGTGCAATGGAGTATTGATTGGAGTCTTAGGGGTTGCAGACTCACTTAAGCGAGAAGCTTCTGTTGTTATAGAGGGCCTCCAGAAAATGGGAATCACGCCTGTAATGGTTACAGGAGATAACTGGAGAACTGCTCGAGCTGTTGCCAAGGAGGTTTGTATATATTTCTATAATATTTTCTTTTTGGTTGGAAGTAGCTCGTGATAATTTTGAGTGCAGTTTCAAGGCTCTTTTACTAGTACCTAGAAAACCAACATCTTTTGCATGGAACATGGTATTGTTATAGTGTGTAATATGAAAAACAAAATTGAGCCGTGGATAGGGATAGTTTTATACTATGAATGAAAGAAAAGTATGATTAAAACCATAACTGGTCTCGTTTTCAAGCTGCCTGTTGATTTTCTTGTGCATAAAAGGCAATAGCAATGTTTGAAGTCAATGCTAAGATTTTAAATTTATTACTACAAATATTTTAATCTTCTCTCTGTTATAAATCATATTGAATATCTGTGAATTCTTCATGACAGTTATAACAAATTTTGGGCAGATATTGATGTTATGGTCAAACTTGGCTAAGAAAATGTGTTTTTTGACAGGTCGGCATTCAAGATGTTAGGGCAGAGGTTATGCCTGCAGGAAAGGCTGATGTGGTTCGTTCATTCCAAAAAGATGGTAGTATAGTTGCAATGGTGGGTGACGGTATAAATGATTCTCCTGCATTAGCTGCTGCAGATGTTGGTATGGCAATTGGAGCTGGGACAGATATTGCAATAGAAGCTGCTAATTATGTGTTGATGAGAGATAATTTGGAAGATGTAATCACAGCTATTGATCTTTCTAAGAAGACATTTTCTCGTATTCGATTGAATTATGTATTTGCCATGGCCTACAATATTATTGCCGTACCAGTTGCTGCCGGGGTTTTATTTCCTTCACTGGGAATCAAGCTTCCACCATGGGTTGCTGGTGCATGCATGGCTCTCTCATCTGTTAGTGTTGTATGTTCTTCTTTGCTTCTTAGAAGATATAGAAAACCAAGACTTACTACAATACTTGAAATAATTGTAAATTAA
Protein sequence

>MS.gene36515.t1

MAPSIQLTSTGAGDDSGDLEDVRLLDSYDKNDVNDDGINRIQVRITGMTCAACSNSVEAALMSVDGVIQASVALLQNKADVVFNRNLVKDEDIKNAIEDAGFEAEILHEPVSTGPKPVGDSTVVGQFTIGGMTCAACVNSVEGILNDITGVKKAVVALATSLGEVEYDPNVISKEDIVIAIEDAGFEASFVQSTSQDEIVLGVVGVCSLVDARVLESMLSGMKGVRQFRFDPLLSELNVVFDPQVLSSRSLVDEIRVVSNDKYTLHVRSPYARMASKDGSESSSMFRLFITSLLLSIPLFFMGVICPHIPFIYSLLLWRCGPFLMDDWLKWALVSVIQFGIGKRFYIAAFRALRNGSTNMDVLVALGTTASYVYSVCALLYGALTGFWSTTYFETSAMLITFVLLGKYLECLAKGKTSDAIKKLVELTPATALLVVKDKDGRPVEEREIDSLLIQPSDTLKVLPGTKIPADGIVTWGSSYVNESMVTGESIPVSKEINASVIGGTINLHGVLHIKATKVGSDTVLSQIINLVETAQMSKAPIQKFADYVASIFVPTIVALSLLTLLCWYTAGALGAYPDEWLPKNGNHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGESLERAQMVKYVIFDKTGTLTQGKATVSVAKVFAGMDRGEFLKLVASAEASSEHPLAKAILQYARHFHFFDESSLTNGSQNDANELKSGWLYDASDFSAIPGRGVQCIIDGQRVLVGNRKLLVESGISISTEVENFVVELEESAKTGILVACNGVLIGVLGVADSLKREASVVIEGLQKMGITPVMVTGDNWRTARAVAKEVGIQDVRAEVMPAGKADVVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIAIEAANYVLMRDNLEDVITAIDLSKKTFSRIRLNYVFAMAYNIIAVPVAAGVLFPSLGIKLPPWVAGACMALSSVSVVCSSLLLRRYRKPRLTTILEIIVN