Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015287.t1 | XP_003611530.1 | 96.1 | 408 | 16 | 0 | 1 | 408 | 1 | 408 | 1.40E-219 | 771.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015287.t1 | K7QHS5 | 76.5 | 408 | 89 | 3 | 3 | 407 | 4 | 407 | 1.4e-170 | 600.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015287.t1 | G7K162 | 96.1 | 408 | 16 | 0 | 1 | 408 | 1 | 408 | 1.0e-219 | 771.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene015287 | MS.gene09632 | PPI |
| MS.gene015287 | MS.gene028536 | PPI |
| MS.gene015287 | MS.gene053637 | PPI |
| MS.gene21440 | MS.gene015287 | PPI |
| MS.gene015287 | MS.gene21440 | PPI |
| MS.gene012839 | MS.gene015287 | PPI |
| MS.gene43507 | MS.gene015287 | PPI |
| MS.gene015287 | MS.gene053638 | PPI |
| MS.gene015044 | MS.gene015287 | PPI |
| MS.gene015287 | MS.gene37450 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015287.t1 | MTR_5g014960 | 96.078 | 408 | 16 | 0 | 1 | 408 | 1 | 408 | 0.0 | 802 |
| MS.gene015287.t1 | MTR_3g103580 | 61.905 | 378 | 140 | 1 | 34 | 407 | 9 | 386 | 1.90e-168 | 477 |
| MS.gene015287.t1 | MTR_3g103580 | 64.912 | 342 | 116 | 1 | 34 | 371 | 9 | 350 | 2.04e-160 | 455 |
| MS.gene015287.t1 | MTR_3g103580 | 66.355 | 321 | 108 | 0 | 87 | 407 | 2 | 322 | 6.01e-158 | 448 |
| MS.gene015287.t1 | MTR_4g092580 | 55.618 | 356 | 157 | 1 | 53 | 407 | 1 | 356 | 2.22e-145 | 417 |
| MS.gene015287.t1 | MTR_4g092590 | 59.091 | 352 | 139 | 3 | 59 | 407 | 7 | 356 | 8.70e-142 | 408 |
| MS.gene015287.t1 | MTR_1g083370 | 25.442 | 283 | 176 | 13 | 120 | 390 | 280 | 539 | 2.55e-13 | 72.0 |
| MS.gene015287.t1 | MTR_1g082470 | 24.383 | 324 | 180 | 12 | 120 | 390 | 282 | 593 | 1.09e-12 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015287.t1 | AT5G65780 | 73.735 | 415 | 100 | 4 | 1 | 407 | 1 | 414 | 0.0 | 613 |
| MS.gene015287.t1 | AT3G49680 | 72.639 | 413 | 106 | 4 | 1 | 407 | 1 | 412 | 0.0 | 603 |
| MS.gene015287.t1 | AT3G49680 | 72.683 | 410 | 109 | 3 | 1 | 407 | 1 | 410 | 0.0 | 599 |
| MS.gene015287.t1 | AT1G10070 | 66.467 | 334 | 112 | 0 | 74 | 407 | 54 | 387 | 5.91e-170 | 481 |
| MS.gene015287.t1 | AT1G10070 | 66.467 | 334 | 112 | 0 | 74 | 407 | 54 | 387 | 5.91e-170 | 481 |
| MS.gene015287.t1 | AT1G10070 | 65.615 | 317 | 109 | 0 | 91 | 407 | 1 | 317 | 6.65e-157 | 445 |
| MS.gene015287.t1 | AT1G50110 | 58.601 | 343 | 140 | 2 | 66 | 407 | 10 | 351 | 8.88e-149 | 426 |
| MS.gene015287.t1 | AT1G10060 | 56.383 | 376 | 164 | 0 | 32 | 407 | 8 | 383 | 6.00e-148 | 425 |
| MS.gene015287.t1 | AT1G50090 | 59.581 | 334 | 134 | 1 | 74 | 407 | 22 | 354 | 3.48e-147 | 422 |
| MS.gene015287.t1 | AT1G10060 | 56.383 | 376 | 164 | 0 | 32 | 407 | 104 | 479 | 2.28e-146 | 424 |
| MS.gene015287.t1 | AT1G50110 | 59.306 | 317 | 128 | 1 | 91 | 407 | 1 | 316 | 4.70e-139 | 400 |
| MS.gene015287.t1 | AT1G10060 | 59.524 | 336 | 136 | 0 | 32 | 367 | 8 | 343 | 1.09e-138 | 401 |
| MS.gene015287.t1 | AT1G10060 | 59.524 | 336 | 136 | 0 | 32 | 367 | 104 | 439 | 3.19e-137 | 401 |
| MS.gene015287.t1 | AT1G10060 | 60.252 | 317 | 126 | 0 | 91 | 407 | 1 | 317 | 1.47e-134 | 388 |
| MS.gene015287.t1 | AT3G19710 | 48.580 | 352 | 176 | 3 | 59 | 407 | 1 | 350 | 7.96e-125 | 365 |
| MS.gene015287.t1 | AT1G10060 | 58.824 | 289 | 119 | 0 | 32 | 320 | 8 | 296 | 1.58e-117 | 345 |
| MS.gene015287.t1 | AT1G10060 | 58.824 | 289 | 119 | 0 | 32 | 320 | 104 | 392 | 4.65e-116 | 345 |
| MS.gene015287.t1 | AT5G27410 | 26.408 | 284 | 177 | 12 | 121 | 395 | 193 | 453 | 7.70e-15 | 76.6 |
| MS.gene015287.t1 | AT5G27410 | 26.761 | 284 | 176 | 13 | 121 | 395 | 281 | 541 | 1.18e-14 | 76.3 |
| MS.gene015287.t1 | AT3G05190 | 27.758 | 281 | 171 | 13 | 121 | 392 | 284 | 541 | 1.41e-14 | 75.9 |
| MS.gene015287.t1 | AT3G05190 | 27.758 | 281 | 171 | 13 | 121 | 392 | 284 | 541 | 1.41e-14 | 75.9 |
| MS.gene015287.t1 | AT3G05190 | 27.758 | 281 | 171 | 13 | 121 | 392 | 284 | 541 | 1.41e-14 | 75.9 |
| MS.gene015287.t1 | AT5G27410 | 26.667 | 285 | 177 | 13 | 120 | 395 | 657 | 918 | 2.23e-14 | 75.9 |
Find 114 sgRNAs with CRISPR-Local
Find 411 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGGTGAATTAAAGCATTT+TGG | 0.128773 | 5.4:+8633047 | MS.gene015287:CDS |
| GTCCTGAAGAAAACGCTTTA+CGG | 0.289014 | 5.4:+8634012 | MS.gene015287:CDS |
| GAGAGCAGCGCCGCACTTAC+TGG | 0.294316 | 5.4:+8632377 | MS.gene015287:CDS |
| CTGTAATATATTTGTTGTTA+AGG | 0.304754 | 5.4:+8636836 | MS.gene015287:CDS |
| CTGTGTGCACAAAAGATATT+TGG | 0.313981 | 5.4:+8636800 | MS.gene015287:CDS |
| AGGGATAGAGAACTGGGTTT+TGG | 0.323061 | 5.4:-8632467 | None:intergenic |
| CATTTGTGTAGGAAATCTTA+TGG | 0.325615 | 5.4:+8638506 | MS.gene015287:intron |
| GATTGGGACAACCTGGGATT+TGG | 0.331845 | 5.4:+8632966 | MS.gene015287:CDS |
| GTATGTTCCCATCGTCTTTA+CGG | 0.334571 | 5.4:-8633980 | None:intergenic |
| GTATATTAGACCTTTGCTAA+TGG | 0.343159 | 5.4:+8634239 | MS.gene015287:CDS |
| TTATTCTTCTTAGGTTCTTA+AGG | 0.358027 | 5.4:+8636728 | MS.gene015287:intron |
| TATATTAGACCTTTGCTAAT+GGG | 0.363044 | 5.4:+8634240 | MS.gene015287:CDS |
| CTCTCCACAATCAAATTGAT+TGG | 0.364477 | 5.4:-8635859 | None:intergenic |
| TACCTTGAGGGATAGAGAAC+TGG | 0.366668 | 5.4:-8632474 | None:intergenic |
| TTGAGTTGGCAGACATAGAT+TGG | 0.370499 | 5.4:+8632949 | MS.gene015287:CDS |
| CTTAACAACAAATATATTAC+AGG | 0.382662 | 5.4:-8636835 | None:intergenic |
| GTTTCACAGCAACTTTATAC+TGG | 0.383287 | 5.4:+8638545 | MS.gene015287:CDS |
| AAAGAAAAGGGGAAGAAAGA+TGG | 0.396589 | 5.4:-8632430 | None:intergenic |
| AATTTAACCACAGGAAGGTT+TGG | 0.400990 | 5.4:+8635834 | MS.gene015287:intron |
| TAATATATGTTTCACCTGTT+GGG | 0.401747 | 5.4:+8634310 | MS.gene015287:CDS |
| CTAATATATGTTTCACCTGT+TGG | 0.402265 | 5.4:+8634309 | MS.gene015287:CDS |
| TTGCCGAGGATAACATGAAT+TGG | 0.417715 | 5.4:+8638591 | MS.gene015287:CDS |
| CGTGCAACTCCTGGTGGCAC+TGG | 0.425635 | 5.4:+8635892 | MS.gene015287:CDS |
| AAGTGGAAGGAAACTGCTTA+TGG | 0.430995 | 5.4:-8632575 | None:intergenic |
| GTTGGCAGCATTACATATCT+TGG | 0.435967 | 5.4:+8638369 | MS.gene015287:CDS |
| ACCTGTTGGGAACTACTTCA+AGG | 0.439851 | 5.4:+8634323 | MS.gene015287:CDS |
| AAGAAAAGGGGAAGAAAGAT+GGG | 0.441692 | 5.4:-8632429 | None:intergenic |
| ACCTTGAAGTAGTTCCCAAC+AGG | 0.446469 | 5.4:-8634324 | None:intergenic |
| ATGGGAAGTGGAGCTGTACT+TGG | 0.449925 | 5.4:+8634258 | MS.gene015287:CDS |
| CTTCTGCTGCTGTTTCTGCT+AGG | 0.455937 | 5.4:+8632634 | MS.gene015287:CDS |
| GGCAAGACCCATCTGTAGTC+TGG | 0.471031 | 5.4:-8638573 | None:intergenic |
| GAAATGCGGAGGAAAGAAAA+GGG | 0.472382 | 5.4:-8632442 | None:intergenic |
| ACCTAGTGTAGAACAGTTCG+TGG | 0.474937 | 5.4:+8634070 | MS.gene015287:CDS |
| GGAAATGCGGAGGAAAGAAA+AGG | 0.478903 | 5.4:-8632443 | None:intergenic |
| AGGCAGGATAGTCCCTTTGA+TGG | 0.481991 | 5.4:-8637594 | None:intergenic |
| AGATATGTAATGCTGCCAAC+AGG | 0.498108 | 5.4:-8638366 | None:intergenic |
| AGACATAGATTGGGACAACC+TGG | 0.499286 | 5.4:+8632959 | MS.gene015287:CDS |
| TGCTCGAAGCCAAGGGTTCG+AGG | 0.499734 | 5.4:+8637646 | MS.gene015287:CDS |
| AGACCTTTGCTAATGGGAAG+TGG | 0.500719 | 5.4:+8634246 | MS.gene015287:CDS |
| GCAGGTTGAGGAGCGATTAG+TGG | 0.505541 | 5.4:+8638281 | MS.gene015287:intron |
| GAACTACATCGTGCAACTCC+TGG | 0.509321 | 5.4:+8635883 | MS.gene015287:CDS |
| GGAAATAGAAGTTACCTTGA+GGG | 0.511170 | 5.4:-8632486 | None:intergenic |
| AAAGGGGAAGAAAGATGGGA+AGG | 0.518021 | 5.4:-8632425 | None:intergenic |
| ATGGAGAACATTGTGGGAAG+TGG | 0.519573 | 5.4:-8632592 | None:intergenic |
| TTTCAACTCCATCCATCAAA+GGG | 0.525314 | 5.4:+8637582 | MS.gene015287:CDS |
| TGAGTTGGCAGACATAGATT+GGG | 0.526116 | 5.4:+8632950 | MS.gene015287:CDS |
| ACTTTAGTACCTCGAACCCT+TGG | 0.527088 | 5.4:-8637655 | None:intergenic |
| ATTGACGTTGCTCGAAGCCA+AGG | 0.529817 | 5.4:+8637638 | MS.gene015287:CDS |
| TATATTAGAAAGGTGTACTC+TGG | 0.530275 | 5.4:-8634294 | None:intergenic |
| AAATCTTATGGAGATGGTGT+TGG | 0.531920 | 5.4:+8638518 | MS.gene015287:CDS |
| ATTTCAACTCCATCCATCAA+AGG | 0.533202 | 5.4:+8637581 | MS.gene015287:CDS |
| AGAAGCATGGAGAACATTGT+GGG | 0.534583 | 5.4:-8632598 | None:intergenic |
| AACGCTTTACGGATGAAGAC+GGG | 0.537251 | 5.4:+8634023 | MS.gene015287:CDS |
| ATGAAATACATATAATCAGT+AGG | 0.537948 | 5.4:-8632996 | None:intergenic |
| TAGTTTAAAACACCAGCAGA+AGG | 0.538120 | 5.4:-8633086 | None:intergenic |
| GCAGACGAGGTCTTCTGCAC+AGG | 0.539575 | 5.4:+8638324 | MS.gene015287:CDS |
| ATTATTGTAGGGGTTATTCG+AGG | 0.540849 | 5.4:+8633944 | MS.gene015287:intron |
| GGCTCCAATCAATTTGATTG+TGG | 0.541715 | 5.4:+8635855 | MS.gene015287:CDS |
| ATTGAATTGAACCCTTCTGC+TGG | 0.543426 | 5.4:+8633074 | MS.gene015287:CDS |
| ATCAAAGGGACTATCCTGCC+TGG | 0.544593 | 5.4:+8637596 | MS.gene015287:CDS |
| GTCTGAGAGCATAAGAAGCA+TGG | 0.547894 | 5.4:-8632611 | None:intergenic |
| TGAGGAGCGATTAGTGGCAG+TGG | 0.547921 | 5.4:+8638287 | MS.gene015287:CDS |
| GCAACTCCTGGTGGCACTGG+AGG | 0.554254 | 5.4:+8635895 | MS.gene015287:CDS |
| TGGCCTTACCAGACTACAGA+TGG | 0.554531 | 5.4:+8638565 | MS.gene015287:CDS |
| AGGTGAAACATATATTAGAA+AGG | 0.556652 | 5.4:-8634304 | None:intergenic |
| AGAAAGGTGTACTCTGGAGC+AGG | 0.558345 | 5.4:-8634288 | None:intergenic |
| TAGGTTGAAGACCAAATCCC+AGG | 0.558955 | 5.4:-8632977 | None:intergenic |
| GACCCATCTGTAGTCTGGTA+AGG | 0.561793 | 5.4:-8638568 | None:intergenic |
| TAAGGCACAGTCTGCAGCAA+AGG | 0.562471 | 5.4:+8636746 | MS.gene015287:CDS |
| ACCTTGAGGGATAGAGAACT+GGG | 0.562520 | 5.4:-8632473 | None:intergenic |
| TCAAGGTGGAACTTTCACTA+AGG | 0.566975 | 5.4:+8633028 | MS.gene015287:CDS |
| TACTGCAGCATAGTTTCCAA+TGG | 0.571620 | 5.4:-8635926 | None:intergenic |
| TTATTGTAGGGGTTATTCGA+GGG | 0.573963 | 5.4:+8633945 | MS.gene015287:intron |
| ACCCAGTTCTCTATCCCTCA+AGG | 0.579065 | 5.4:+8632472 | MS.gene015287:CDS |
| CAGTCTGCAGCAAAGGCGAA+AGG | 0.579859 | 5.4:+8636753 | MS.gene015287:CDS |
| TTCACACCTCCAGTGCCACC+AGG | 0.583743 | 5.4:-8635901 | None:intergenic |
| AGTCCAATTCATGTTATCCT+CGG | 0.585458 | 5.4:-8638594 | None:intergenic |
| AGGATAGTCCCTTTGATGGA+TGG | 0.587677 | 5.4:-8637590 | None:intergenic |
| AAGAAGCATGGAGAACATTG+TGG | 0.590094 | 5.4:-8632599 | None:intergenic |
| TGTAGGAAATCTTATGGAGA+TGG | 0.590978 | 5.4:+8638512 | MS.gene015287:intron |
| AAAGCTTACCGTAAAGACGA+TGG | 0.591690 | 5.4:+8633972 | MS.gene015287:CDS |
| TGTGCACAAAAGATATTTGG+AGG | 0.592213 | 5.4:+8636803 | MS.gene015287:CDS |
| TATTTCATGAAATGTGATCA+AGG | 0.593589 | 5.4:+8633011 | MS.gene015287:CDS |
| GCACAAAAGATATTTGGAGG+AGG | 0.595462 | 5.4:+8636806 | MS.gene015287:CDS |
| CGAATTGCTCGAGGCAGACG+AGG | 0.595958 | 5.4:+8638311 | MS.gene015287:CDS |
| ATGCAGTGAGACGATTGAGT+TGG | 0.596608 | 5.4:+8632935 | MS.gene015287:intron |
| AGAACATTGTGGGAAGTGGA+AGG | 0.597379 | 5.4:-8632588 | None:intergenic |
| CAAGGTGGAACTTTCACTAA+GGG | 0.599957 | 5.4:+8633029 | MS.gene015287:CDS |
| AAACGCTTTACGGATGAAGA+CGG | 0.601864 | 5.4:+8634022 | MS.gene015287:CDS |
| AGTTTAAAACACCAGCAGAA+GGG | 0.601980 | 5.4:-8633085 | None:intergenic |
| AACTGTTCTACACTAGGTGA+TGG | 0.603217 | 5.4:-8634065 | None:intergenic |
| TTGACGTTGCTCGAAGCCAA+GGG | 0.603277 | 5.4:+8637639 | MS.gene015287:CDS |
| CTAGCAGAAACAGCAGCAGA+AGG | 0.606158 | 5.4:-8632633 | None:intergenic |
| ACAATGAACCTTTACCCTGA+GGG | 0.606783 | 5.4:-8634218 | None:intergenic |
| GACATAGATTGGGACAACCT+GGG | 0.616851 | 5.4:+8632960 | MS.gene015287:CDS |
| ACTGGAGGTGTGAAGACCAT+TGG | 0.619723 | 5.4:+8635910 | MS.gene015287:CDS |
| TCCACGAACTGTTCTACACT+AGG | 0.621206 | 5.4:-8634071 | None:intergenic |
| ACTACAGATGGGTCTTGCCG+AGG | 0.629438 | 5.4:+8638577 | MS.gene015287:CDS |
| AAGCTTACCGTAAAGACGAT+GGG | 0.636223 | 5.4:+8633973 | MS.gene015287:CDS |
| TAGTCGAATGCCAGTAAGTG+CGG | 0.638696 | 5.4:-8632387 | None:intergenic |
| AATGAACCTTTACCCTGAGG+GGG | 0.644930 | 5.4:-8634216 | None:intergenic |
| CTTCTGCACAGGAACAGCTG+TGG | 0.644994 | 5.4:+8638335 | MS.gene015287:CDS |
| GCTCCACTTCCCATTAGCAA+AGG | 0.645938 | 5.4:-8634249 | None:intergenic |
| AAATGCGGAGGAAAGAAAAG+GGG | 0.647081 | 5.4:-8632441 | None:intergenic |
| GCTGTGGTTGTATCACCTGT+TGG | 0.657278 | 5.4:+8638351 | MS.gene015287:CDS |
| GGCCTTACCAGACTACAGAT+GGG | 0.658026 | 5.4:+8638566 | MS.gene015287:CDS |
| GGCAGTGGACGAATTGCTCG+AGG | 0.659142 | 5.4:+8638302 | MS.gene015287:CDS |
| AAGATGGGAAGGACAGATCG+AGG | 0.659365 | 5.4:-8632414 | None:intergenic |
| CTACATCGTGCAACTCCTGG+TGG | 0.669504 | 5.4:+8635886 | MS.gene015287:CDS |
| CAATGAACCTTTACCCTGAG+GGG | 0.670845 | 5.4:-8634217 | None:intergenic |
| TACAATGAACCTTTACCCTG+AGG | 0.684428 | 5.4:-8634219 | None:intergenic |
| ATGAACCTTTACCCTGAGGG+GGG | 0.696169 | 5.4:-8634215 | None:intergenic |
| GGATGAAGACGGGTGCAGAG+CGG | 0.745267 | 5.4:+8634033 | MS.gene015287:CDS |
| TTCATGAAATGTGATCAAGG+TGG | 0.753995 | 5.4:+8633014 | MS.gene015287:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAGAAAAAAAATTATAC+AGG | - | chr5.4:8637184-8637203 | None:intergenic | 10.0% |
| !! | ATATAATAATTGTAAAAAAG+AGG | - | chr5.4:8636530-8636549 | None:intergenic | 10.0% |
| !! | TAATTGAAATTAGAAAAAAT+AGG | - | chr5.4:8636404-8636423 | None:intergenic | 10.0% |
| !! | TTTAAATTATGATTATATTC+TGG | + | chr5.4:8636885-8636904 | MS.gene015287:intron | 10.0% |
| !!! | AACATTTTATATTAGAATTT+TGG | + | chr5.4:8633290-8633309 | MS.gene015287:intron | 10.0% |
| !!! | ACATTTTATATTAGAATTTT+GGG | + | chr5.4:8633291-8633310 | MS.gene015287:intron | 10.0% |
| !!! | ATAAAGTTATTTTGAATTAA+TGG | + | chr5.4:8638466-8638485 | MS.gene015287:intron | 10.0% |
| !!! | TCATAATTTAAAATTTTAAC+CGG | - | chr5.4:8636877-8636896 | None:intergenic | 10.0% |
| !! | AAAAAATTATACCAAATGAT+AGG | - | chr5.4:8634145-8634164 | None:intergenic | 15.0% |
| !! | AACATAAGTTTATAATTGAT+GGG | - | chr5.4:8633580-8633599 | None:intergenic | 15.0% |
| !! | CATATATAATTATCATATCT+TGG | - | chr5.4:8636136-8636155 | None:intergenic | 15.0% |
| !! | TGAAAAATAGAAGTAAATAT+GGG | + | chr5.4:8637759-8637778 | MS.gene015287:intron | 15.0% |
| !! | TTAAATATCATATTCATATG+AGG | - | chr5.4:8634556-8634575 | None:intergenic | 15.0% |
| !! | TTGAAAAATAGAAGTAAATA+TGG | + | chr5.4:8637758-8637777 | MS.gene015287:intron | 15.0% |
| !!! | AAAGTTTATATATACTGTTT+TGG | + | chr5.4:8637491-8637510 | MS.gene015287:intron | 15.0% |
| !!! | ATCTCTTTATAAATCTTTTA+AGG | + | chr5.4:8635775-8635794 | MS.gene015287:intron | 15.0% |
| !!! | ATTGTTTTTTGTATTAAGAA+AGG | - | chr5.4:8636964-8636983 | None:intergenic | 15.0% |
| !!! | CAATAAAATAAGAGTATAAA+AGG | - | chr5.4:8636282-8636301 | None:intergenic | 15.0% |
| !!! | TAATTTTCATTTCTTAATAC+TGG | + | chr5.4:8636619-8636638 | MS.gene015287:intron | 15.0% |
| !!! | TATAATATTGTTGTTAATCA+GGG | + | chr5.4:8633193-8633212 | MS.gene015287:intron | 15.0% |
| !!! | TTTTATTTTTAATCTGGAAA+GGG | + | chr5.4:8633800-8633819 | MS.gene015287:intron | 15.0% |
| !!! | TTTTTAAAATTAGAACACAT+CGG | + | chr5.4:8634791-8634810 | MS.gene015287:intron | 15.0% |
| !! | AAAACTAGTAAAAATACTAC+TGG | - | chr5.4:8634619-8634638 | None:intergenic | 20.0% |
| !! | AATACAAAAAACAATTTACC+TGG | + | chr5.4:8636969-8636988 | MS.gene015287:intron | 20.0% |
| !! | AATATTAAGTCAGTTTAAGT+TGG | - | chr5.4:8635534-8635553 | None:intergenic | 20.0% |
| !! | AATTCTACAAACATATTTCA+CGG | + | chr5.4:8637312-8637331 | MS.gene015287:intron | 20.0% |
| !! | ACTTTAGTCTAAATACAAAA+AGG | - | chr5.4:8638201-8638220 | None:intergenic | 20.0% |
| !! | ATCCAAAAAGAATTAACAAA+AGG | - | chr5.4:8632859-8632878 | None:intergenic | 20.0% |
| !! | ATGAAATACATATAATCAGT+AGG | - | chr5.4:8632999-8633018 | None:intergenic | 20.0% |
| !! | ATGACCCATATTTAAATTTA+AGG | - | chr5.4:8636029-8636048 | None:intergenic | 20.0% |
| !! | CAATTAATAAACCTGAAAAT+AGG | - | chr5.4:8636252-8636271 | None:intergenic | 20.0% |
| !! | CTTAACAACAAATATATTAC+AGG | - | chr5.4:8636838-8636857 | None:intergenic | 20.0% |
| !! | CTTCTTAATCTCTATTTATT+TGG | + | chr5.4:8638068-8638087 | MS.gene015287:intron | 20.0% |
| !! | CTTGAATGAATTTAATAAAG+TGG | + | chr5.4:8636332-8636351 | MS.gene015287:intron | 20.0% |
| !! | GAACATAAGTTTATAATTGA+TGG | - | chr5.4:8633581-8633600 | None:intergenic | 20.0% |
| !! | GAGCTGTAAAAAAAAAAAAA+AGG | - | chr5.4:8632556-8632575 | None:intergenic | 20.0% |
| !! | GTAAAAAAAAAAAAAAGGTG+AGG | - | chr5.4:8632551-8632570 | None:intergenic | 20.0% |
| !! | GTAAGTTAAAGTAAAAAATG+AGG | - | chr5.4:8635691-8635710 | None:intergenic | 20.0% |
| !! | GTTGCCTTAAATTTAAATAT+GGG | + | chr5.4:8636022-8636041 | MS.gene015287:intron | 20.0% |
| !! | TACAGAAAACAATTTGTATT+TGG | + | chr5.4:8638413-8638432 | MS.gene015287:intron | 20.0% |
| !! | TATAATTATCATATCTTGGA+AGG | - | chr5.4:8636132-8636151 | None:intergenic | 20.0% |
| !! | TATATCACTATCAAAAAACA+TGG | - | chr5.4:8632905-8632924 | None:intergenic | 20.0% |
| !! | TCAATTATAAACTTATGTTC+AGG | + | chr5.4:8633581-8633600 | MS.gene015287:intron | 20.0% |
| !!! | AATAGTGATTTGTTCAAATT+TGG | + | chr5.4:8633225-8633244 | MS.gene015287:intron | 20.0% |
| !!! | AGTATATATAAACTTTTGCA+TGG | - | chr5.4:8637487-8637506 | None:intergenic | 20.0% |
| !!! | ATTTTGATTTGTCTCTATTA+TGG | - | chr5.4:8634702-8634721 | None:intergenic | 20.0% |
| !!! | CATTTTGATAAGAAACAATT+GGG | + | chr5.4:8636203-8636222 | MS.gene015287:intron | 20.0% |
| !!! | CTGTAATATATTTGTTGTTA+AGG | + | chr5.4:8636836-8636855 | MS.gene015287:CDS | 20.0% |
| !!! | GCTTTGTTTTATTTTTAATC+TGG | + | chr5.4:8633794-8633813 | MS.gene015287:intron | 20.0% |
| !!! | GTATAATATTGTTGTTAATC+AGG | + | chr5.4:8633192-8633211 | MS.gene015287:intron | 20.0% |
| !!! | GTATATATAAACTTTTGCAT+GGG | - | chr5.4:8637486-8637505 | None:intergenic | 20.0% |
| !!! | GTTTTATTTTTAATCTGGAA+AGG | + | chr5.4:8633799-8633818 | MS.gene015287:intron | 20.0% |
| !!! | GTTTTGAATTTGTTTTAGAT+TGG | + | chr5.4:8633738-8633757 | MS.gene015287:intron | 20.0% |
| !!! | TATATATAAACTTTTGCATG+GGG | - | chr5.4:8637485-8637504 | None:intergenic | 20.0% |
| !!! | TCATTTTGATAAGAAACAAT+TGG | + | chr5.4:8636202-8636221 | MS.gene015287:intron | 20.0% |
| !!! | TCTGTTTCAAAATTTTCAAT+TGG | - | chr5.4:8634848-8634867 | None:intergenic | 20.0% |
| !!! | TGTTAATAGATTTGTTAATC+TGG | + | chr5.4:8637373-8637392 | MS.gene015287:intron | 20.0% |
| !!! | TTATATTAGAATTTTGGGTT+GGG | + | chr5.4:8633296-8633315 | MS.gene015287:intron | 20.0% |
| !!! | TTTAAGATTTTCAAACATGA+TGG | + | chr5.4:8634473-8634492 | MS.gene015287:intron | 20.0% |
| !!! | TTTATATTAGAATTTTGGGT+TGG | + | chr5.4:8633295-8633314 | MS.gene015287:intron | 20.0% |
| !!! | TTTTAAAATTAGAACACATC+GGG | + | chr5.4:8634792-8634811 | MS.gene015287:intron | 20.0% |
| ! | AAACTTTACTTGTTCCAATT+TGG | + | chr5.4:8633377-8633396 | MS.gene015287:intron | 25.0% |
| ! | AACTTTACTTGTTCCAATTT+GGG | + | chr5.4:8633378-8633397 | MS.gene015287:intron | 25.0% |
| ! | AAGAGGAAGAATAATTAATG+TGG | - | chr5.4:8636513-8636532 | None:intergenic | 25.0% |
| ! | AATATGTTTGTAGAATTGTG+TGG | - | chr5.4:8637309-8637328 | None:intergenic | 25.0% |
| ! | AATGGAATTGAAGAAAAACT+TGG | - | chr5.4:8638118-8638137 | None:intergenic | 25.0% |
| ! | AATGTTAAAGAGTCCTAAAT+TGG | - | chr5.4:8633618-8633637 | None:intergenic | 25.0% |
| ! | AATTTAGTTAAGTGGTTTCT+GGG | - | chr5.4:8638171-8638190 | None:intergenic | 25.0% |
| ! | AGATCAGTATTGTTAAATAG+AGG | - | chr5.4:8633711-8633730 | None:intergenic | 25.0% |
| ! | AGGTGAAACATATATTAGAA+AGG | - | chr5.4:8634307-8634326 | None:intergenic | 25.0% |
| ! | AGGTTATATACTATTCATGT+TGG | + | chr5.4:8633118-8633137 | MS.gene015287:intron | 25.0% |
| ! | AGTAAAAATACTACTGGATA+AGG | - | chr5.4:8634613-8634632 | None:intergenic | 25.0% |
| ! | ATAACTTTATAGTCAATGAC+AGG | - | chr5.4:8638456-8638475 | None:intergenic | 25.0% |
| ! | ATCACAGAACTTATAGTTAT+TGG | + | chr5.4:8633654-8633673 | MS.gene015287:intron | 25.0% |
| ! | ATTAACATGTAAGGTAACAT+TGG | - | chr5.4:8638257-8638276 | None:intergenic | 25.0% |
| ! | CAAATTTATGAATCTAGGTA+AGG | - | chr5.4:8635250-8635269 | None:intergenic | 25.0% |
| ! | CTGTACAAATTTATGAATCT+AGG | - | chr5.4:8635255-8635274 | None:intergenic | 25.0% |
| ! | GAAAAAAAATTATACAGGAG+AGG | - | chr5.4:8637179-8637198 | None:intergenic | 25.0% |
| ! | GACATTAAGTAATAAATGTC+AGG | + | chr5.4:8637802-8637821 | MS.gene015287:intron | 25.0% |
| ! | GGTGTATGTTTCTTATAATA+AGG | - | chr5.4:8636231-8636250 | None:intergenic | 25.0% |
| ! | GGTTGCCTTAAATTTAAATA+TGG | + | chr5.4:8636021-8636040 | MS.gene015287:intron | 25.0% |
| ! | GTAATATAGAACCTATCATT+TGG | + | chr5.4:8634131-8634150 | MS.gene015287:intron | 25.0% |
| ! | TAAAGTTTCATATTCCAATG+TGG | - | chr5.4:8634365-8634384 | None:intergenic | 25.0% |
| ! | TAACAATACTGATCTATACT+TGG | + | chr5.4:8633716-8633735 | MS.gene015287:intron | 25.0% |
| ! | TAACATACATAAGCTTGATT+AGG | + | chr5.4:8634174-8634193 | MS.gene015287:intron | 25.0% |
| ! | TAATATATGTTTCACCTGTT+GGG | + | chr5.4:8634310-8634329 | MS.gene015287:CDS | 25.0% |
| ! | TACTTAATGTCTATTGTCAA+GGG | - | chr5.4:8637793-8637812 | None:intergenic | 25.0% |
| ! | TATATTAGACCTTTGCTAAT+GGG | + | chr5.4:8634240-8634259 | MS.gene015287:CDS | 25.0% |
| ! | TATTTCATGAAATGTGATCA+AGG | + | chr5.4:8633011-8633030 | MS.gene015287:CDS | 25.0% |
| ! | TCTGCTTCATAATTATTGTA+GGG | + | chr5.4:8633933-8633952 | MS.gene015287:intron | 25.0% |
| ! | TGCTGAATATTATTAGAACT+GGG | + | chr5.4:8635325-8635344 | MS.gene015287:intron | 25.0% |
| ! | TGGTTTAAATTCTCTTGTAA+TGG | - | chr5.4:8635514-8635533 | None:intergenic | 25.0% |
| ! | TTACTTAATGTCTATTGTCA+AGG | - | chr5.4:8637794-8637813 | None:intergenic | 25.0% |
| ! | TTAGTCTAAATACAAAAAGG+TGG | - | chr5.4:8638198-8638217 | None:intergenic | 25.0% |
| ! | TTATTCTTCTTAGGTTCTTA+AGG | + | chr5.4:8636728-8636747 | MS.gene015287:intron | 25.0% |
| ! | TTCTTATCAAAATGAAAGCA+TGG | - | chr5.4:8636197-8636216 | None:intergenic | 25.0% |
| ! | TTGCTGAATATTATTAGAAC+TGG | + | chr5.4:8635324-8635343 | MS.gene015287:intron | 25.0% |
| ! | TTGTTAAATAGAGGCTATAA+CGG | - | chr5.4:8633702-8633721 | None:intergenic | 25.0% |
| !! | AAGCATGGAGTATTATTTAA+AGG | - | chr5.4:8636182-8636201 | None:intergenic | 25.0% |
| !! | AAGGTATCTATTTAATGAAC+CGG | + | chr5.4:8636855-8636874 | MS.gene015287:intron | 25.0% |
| !! | AATTTTGTCGTCTGTTTATT+TGG | + | chr5.4:8633895-8633914 | MS.gene015287:intron | 25.0% |
| !! | ATATATAAACTTTTGCATGG+GGG | - | chr5.4:8637484-8637503 | None:intergenic | 25.0% |
| !! | TCAGAATGATGTTTGAAATT+GGG | + | chr5.4:8634985-8635004 | MS.gene015287:intron | 25.0% |
| !! | TGCCTTTTGTTAATTCTTTT+TGG | + | chr5.4:8632854-8632873 | MS.gene015287:intron | 25.0% |
| !! | TTCAGAATGATGTTTGAAAT+TGG | + | chr5.4:8634984-8635003 | MS.gene015287:intron | 25.0% |
| !! | TTTACTTTAACTTACACCTT+AGG | + | chr5.4:8635696-8635715 | MS.gene015287:intron | 25.0% |
| !! | TTTGGTTCCTAATTAATCAA+TGG | + | chr5.4:8638086-8638105 | MS.gene015287:intron | 25.0% |
| !!! | CTATTTTTGTACTTTACGTT+TGG | + | chr5.4:8633868-8633887 | MS.gene015287:intron | 25.0% |
| !!! | CTTTTTTGTTGTAACTGAAT+GGG | + | chr5.4:8635617-8635636 | MS.gene015287:intron | 25.0% |
| !!! | TTATAAAGAGATGAGTTGAT+TGG | - | chr5.4:8635767-8635786 | None:intergenic | 25.0% |
| AAAGTTTGAACATGTAGTGA+GGG | - | chr5.4:8633364-8633383 | None:intergenic | 30.0% | |
| AGTAACAACTTTATTGCTTC+AGG | + | chr5.4:8634642-8634661 | MS.gene015287:intron | 30.0% | |
| ATAGATTAACATCACTAGCA+TGG | - | chr5.4:8635382-8635401 | None:intergenic | 30.0% | |
| ATATCAATTTAACCACAGGA+AGG | + | chr5.4:8635829-8635848 | MS.gene015287:intron | 30.0% | |
| ATCTATACAGAAGTGAGAAT+AGG | + | chr5.4:8635396-8635415 | MS.gene015287:intron | 30.0% | |
| CAATTTAGTTAAGTGGTTTC+TGG | - | chr5.4:8638172-8638191 | None:intergenic | 30.0% | |
| CAGAATATCAATTTAACCAC+AGG | + | chr5.4:8635825-8635844 | MS.gene015287:intron | 30.0% | |
| CATGTGTGATTATTCTTCTT+AGG | + | chr5.4:8636719-8636738 | MS.gene015287:intron | 30.0% | |
| CATTTGTGTAGGAAATCTTA+TGG | + | chr5.4:8638506-8638525 | MS.gene015287:intron | 30.0% | |
| CTAATATATGTTTCACCTGT+TGG | + | chr5.4:8634309-8634328 | MS.gene015287:CDS | 30.0% | |
| CTAATTTCCATATGCTTTCA+GGG | + | chr5.4:8637551-8637570 | MS.gene015287:intron | 30.0% | |
| CTACACTTTCAAAATCAGTA+TGG | + | chr5.4:8637120-8637139 | MS.gene015287:intron | 30.0% | |
| CTCTGCTTCATAATTATTGT+AGG | + | chr5.4:8633932-8633951 | MS.gene015287:intron | 30.0% | |
| CTGCTTCATAATTATTGTAG+GGG | + | chr5.4:8633934-8633953 | MS.gene015287:intron | 30.0% | |
| GACAAATCAAAATATGCCAA+AGG | + | chr5.4:8634709-8634728 | MS.gene015287:intron | 30.0% | |
| GTATATTAGACCTTTGCTAA+TGG | + | chr5.4:8634239-8634258 | MS.gene015287:CDS | 30.0% | |
| GTATTAAGAAAGGAATGAGA+AGG | - | chr5.4:8636954-8636973 | None:intergenic | 30.0% | |
| TAAAGTTTGAACATGTAGTG+AGG | - | chr5.4:8633365-8633384 | None:intergenic | 30.0% | |
| TAAGTAATAAATGTCAGGTG+TGG | + | chr5.4:8637807-8637826 | MS.gene015287:intron | 30.0% | |
| TCAAATTTGGATATGCAAGA+GGG | + | chr5.4:8633238-8633257 | MS.gene015287:intron | 30.0% | |
| TCAAGTTTGAATAAACCCAT+TGG | - | chr5.4:8636317-8636336 | None:intergenic | 30.0% | |
| TTAGAATCTTCATCATCATC+TGG | - | chr5.4:8637411-8637430 | None:intergenic | 30.0% | |
| TTCAAATTTGGATATGCAAG+AGG | + | chr5.4:8633237-8633256 | MS.gene015287:intron | 30.0% | |
| ! | AGAAACATACACCTATTTTC+AGG | + | chr5.4:8636238-8636257 | MS.gene015287:intron | 30.0% |
| ! | AGTCTAAACAATGCACTTTT+TGG | - | chr5.4:8636089-8636108 | None:intergenic | 30.0% |
| ! | ATGAACTCCACATCTATTTT+GGG | - | chr5.4:8634917-8634936 | None:intergenic | 30.0% |
| ! | GCAAGAACCATTGATTAATT+AGG | - | chr5.4:8638096-8638115 | None:intergenic | 30.0% |
| ! | TAAGTTTGGATAACACCTTT+TGG | + | chr5.4:8637246-8637265 | MS.gene015287:intron | 30.0% |
| ! | TAATTTGAAAAGCACAGCTT+AGG | - | chr5.4:8637735-8637754 | None:intergenic | 30.0% |
| ! | TATATTAGAAAGGTGTACTC+TGG | - | chr5.4:8634297-8634316 | None:intergenic | 30.0% |
| ! | TCAGTACATGATAGCAATTT+TGG | - | chr5.4:8636450-8636469 | None:intergenic | 30.0% |
| ! | TGCAATATGACTTGTAAGTT+TGG | + | chr5.4:8637232-8637251 | MS.gene015287:intron | 30.0% |
| ! | TTTTTCTTCGACATTTGTGT+AGG | + | chr5.4:8638495-8638514 | MS.gene015287:intron | 30.0% |
| !! | AAGGGTGAATTAAAGCATTT+TGG | + | chr5.4:8633047-8633066 | MS.gene015287:CDS | 30.0% |
| !! | ACCATATTAAACTTGCTGTT+GGG | + | chr5.4:8633513-8633532 | MS.gene015287:intron | 30.0% |
| !! | ACTCATGATGGATAGATATT+GGG | + | chr5.4:8634950-8634969 | MS.gene015287:intron | 30.0% |
| !! | AGGGTGAATTAAAGCATTTT+GGG | + | chr5.4:8633048-8633067 | MS.gene015287:CDS | 30.0% |
| !! | AGGTACTAAAGTTTTAGTCA+AGG | + | chr5.4:8637666-8637685 | MS.gene015287:intron | 30.0% |
| !! | CTAAAAGAGTACCAAAAATC+AGG | - | chr5.4:8637100-8637119 | None:intergenic | 30.0% |
| !! | CTTTACGTCTTGTTTCTTAT+TGG | + | chr5.4:8638224-8638243 | MS.gene015287:intron | 30.0% |
| !! | GTACTGACTAAATAAGCATA+TGG | + | chr5.4:8636463-8636482 | MS.gene015287:intron | 30.0% |
| !! | TACCATATTAAACTTGCTGT+TGG | + | chr5.4:8633512-8633531 | MS.gene015287:intron | 30.0% |
| !! | TACTCATGATGGATAGATAT+TGG | + | chr5.4:8634949-8634968 | MS.gene015287:intron | 30.0% |
| !!! | GCTTTTTTGTTGTAACTGAA+TGG | + | chr5.4:8635616-8635635 | MS.gene015287:intron | 30.0% |
| !!! | TGTTTTAGCAAACAAACGTT+GGG | + | chr5.4:8634109-8634128 | MS.gene015287:CDS | 30.0% |
| AAAGAAAAGGGGAAGAAAGA+TGG | - | chr5.4:8632433-8632452 | None:intergenic | 35.0% | |
| AAATCTTATGGAGATGGTGT+TGG | + | chr5.4:8638518-8638537 | MS.gene015287:CDS | 35.0% | |
| AAATTAGAAGAAGCCACCAA+TGG | - | chr5.4:8634774-8634793 | None:intergenic | 35.0% | |
| AACTCGTTCCTTAATAGTTG+CGG | - | chr5.4:8635216-8635235 | None:intergenic | 35.0% | |
| AAGAAAAGGGGAAGAAAGAT+GGG | - | chr5.4:8632432-8632451 | None:intergenic | 35.0% | |
| AAGCTTGATTAGGTGAATGT+TGG | + | chr5.4:8634184-8634203 | MS.gene015287:intron | 35.0% | |
| AAGTATAGCAAACAGAATGC+TGG | + | chr5.4:8634890-8634909 | MS.gene015287:intron | 35.0% | |
| AATCACATATGTCAGTGTTG+TGG | + | chr5.4:8632796-8632815 | MS.gene015287:intron | 35.0% | |
| AATTAGAAGAAGCCACCAAT+GGG | - | chr5.4:8634773-8634792 | None:intergenic | 35.0% | |
| AATTTAACCACAGGAAGGTT+TGG | + | chr5.4:8635834-8635853 | MS.gene015287:intron | 35.0% | |
| ACTCAAACACACAAAATCAC+AGG | - | chr5.4:8635183-8635202 | None:intergenic | 35.0% | |
| AGAGGACAAACAAACTGAAA+AGG | - | chr5.4:8635973-8635992 | None:intergenic | 35.0% | |
| AGGAAGGAAAATGAAAGAGA+GGG | - | chr5.4:8632516-8632535 | None:intergenic | 35.0% | |
| AGTCCAATTCATGTTATCCT+CGG | - | chr5.4:8638597-8638616 | None:intergenic | 35.0% | |
| ATGCTTATGCTTCACTACAT+TGG | + | chr5.4:8635348-8635367 | MS.gene015287:intron | 35.0% | |
| ATTATTGTAGGGGTTATTCG+AGG | + | chr5.4:8633944-8633963 | MS.gene015287:intron | 35.0% | |
| ATTGTGTTCTTTCTCACACT+TGG | + | chr5.4:8635020-8635039 | MS.gene015287:intron | 35.0% | |
| ATTTCAACTCCATCCATCAA+AGG | + | chr5.4:8637581-8637600 | MS.gene015287:CDS | 35.0% | |
| CAAACAAACTGAAAAGGACA+AGG | - | chr5.4:8635967-8635986 | None:intergenic | 35.0% | |
| CACTTTCAAAATCAGTATGG+TGG | + | chr5.4:8637123-8637142 | MS.gene015287:intron | 35.0% | |
| CAGATAACTCAAGTTATCTC+TGG | - | chr5.4:8636589-8636608 | None:intergenic | 35.0% | |
| CCTAATTTCCATATGCTTTC+AGG | + | chr5.4:8637550-8637569 | MS.gene015287:intron | 35.0% | |
| CGATGTAAATACCATAAGCA+AGG | + | chr5.4:8634423-8634442 | MS.gene015287:intron | 35.0% | |
| CGTTCAGTTTGAAAAGATGA+AGG | + | chr5.4:8635645-8635664 | MS.gene015287:intron | 35.0% | |
| CTACATCAACCTTACAAAAC+AGG | + | chr5.4:8633537-8633556 | MS.gene015287:intron | 35.0% | |
| CTCTCCACAATCAAATTGAT+TGG | - | chr5.4:8635862-8635881 | None:intergenic | 35.0% | |
| CTGTGTGCACAAAAGATATT+TGG | + | chr5.4:8636800-8636819 | MS.gene015287:CDS | 35.0% | |
| CTTGGTTAATGTACTCATGA+TGG | + | chr5.4:8634938-8634957 | MS.gene015287:intron | 35.0% | |
| GAAAATGAAAGAGAGGGAAA+TGG | - | chr5.4:8632510-8632529 | None:intergenic | 35.0% | |
| GAATTGTTACACCAGAATAC+AGG | - | chr5.4:8637462-8637481 | None:intergenic | 35.0% | |
| GGAAATAGAAGTTACCTTGA+GGG | - | chr5.4:8632489-8632508 | None:intergenic | 35.0% | |
| GTCCTAAATTGGAAGAGATA+AGG | - | chr5.4:8633607-8633626 | None:intergenic | 35.0% | |
| GTGGTCTCAATTTAGTTAAG+TGG | - | chr5.4:8638179-8638198 | None:intergenic | 35.0% | |
| GTTGGAAAATCTTGCATCTT+AGG | + | chr5.4:8637829-8637848 | MS.gene015287:intron | 35.0% | |
| GTTTCACAGCAACTTTATAC+TGG | + | chr5.4:8638545-8638564 | MS.gene015287:CDS | 35.0% | |
| TAATAAATGTCAGGTGTGGT+TGG | + | chr5.4:8637811-8637830 | MS.gene015287:intron | 35.0% | |
| TACATAGAGCAACCTAACAT+GGG | - | chr5.4:8638026-8638045 | None:intergenic | 35.0% | |
| TACTATTAGGTCACTGCTAT+CGG | - | chr5.4:8633461-8633480 | None:intergenic | 35.0% | |
| TGGAAATAGAAGTTACCTTG+AGG | - | chr5.4:8632490-8632509 | None:intergenic | 35.0% | |
| TGTAGGAAATCTTATGGAGA+TGG | + | chr5.4:8638512-8638531 | MS.gene015287:intron | 35.0% | |
| TGTCTGTAAAAAGAAGTCGT+AGG | + | chr5.4:8634516-8634535 | MS.gene015287:intron | 35.0% | |
| TGTGCACAAAAGATATTTGG+AGG | + | chr5.4:8636803-8636822 | MS.gene015287:CDS | 35.0% | |
| TTAAGAAAGGAATGAGAAGG+TGG | - | chr5.4:8636951-8636970 | None:intergenic | 35.0% | |
| TTATTGTAGGGGTTATTCGA+GGG | + | chr5.4:8633945-8633964 | MS.gene015287:intron | 35.0% | |
| TTCATGAAATGTGATCAAGG+TGG | + | chr5.4:8633014-8633033 | MS.gene015287:CDS | 35.0% | |
| TTTCAACTCCATCCATCAAA+GGG | + | chr5.4:8637582-8637601 | MS.gene015287:CDS | 35.0% | |
| ! | AGGATTGCTGTTACTAACAA+TGG | - | chr5.4:8638136-8638155 | None:intergenic | 35.0% |
| ! | AGTTTAAAACACCAGCAGAA+GGG | - | chr5.4:8633088-8633107 | None:intergenic | 35.0% |
| ! | ATAAGCAAGGAACTTTGAAG+CGG | + | chr5.4:8634436-8634455 | MS.gene015287:intron | 35.0% |
| ! | CATGAACTCCACATCTATTT+TGG | - | chr5.4:8634918-8634937 | None:intergenic | 35.0% |
| ! | CCTGAAAGCATATGGAAATT+AGG | - | chr5.4:8637553-8637572 | None:intergenic | 35.0% |
| ! | GTACATGATAGCAATTTTGG+TGG | - | chr5.4:8636447-8636466 | None:intergenic | 35.0% |
| ! | TAGTTTAAAACACCAGCAGA+AGG | - | chr5.4:8633089-8633108 | None:intergenic | 35.0% |
| !! | AATGCCACAAGAGTGTTATT+TGG | + | chr5.4:8637273-8637292 | MS.gene015287:intron | 35.0% |
| !! | TCTGCTGGTGTTTTAAACTA+CGG | + | chr5.4:8633089-8633108 | MS.gene015287:CDS | 35.0% |
| !!! | ATACTTTTTCGAGTAATGCC+AGG | - | chr5.4:8637617-8637636 | None:intergenic | 35.0% |
| !!! | ATTGTCATTTTCGATGCCAA+TGG | + | chr5.4:8636298-8636317 | MS.gene015287:intron | 35.0% |
| !!! | CAAAGTTTCCGTTTTTTGGA+GGG | - | chr5.4:8636063-8636082 | None:intergenic | 35.0% |
| !!! | CTGTTTTAGCAAACAAACGT+TGG | + | chr5.4:8634108-8634127 | MS.gene015287:CDS | 35.0% |
| !!! | CTGTTTTGTAAGGTTGATGT+AGG | - | chr5.4:8633539-8633558 | None:intergenic | 35.0% |
| !!! | GATGCAAAGTTTCCGTTTTT+TGG | - | chr5.4:8636067-8636086 | None:intergenic | 35.0% |
| !!! | TTGTCATTTTCGATGCCAAT+GGG | + | chr5.4:8636299-8636318 | MS.gene015287:intron | 35.0% |
| AAACGCTTTACGGATGAAGA+CGG | + | chr5.4:8634022-8634041 | MS.gene015287:CDS | 40.0% | |
| AAAGCTTACCGTAAAGACGA+TGG | + | chr5.4:8633972-8633991 | MS.gene015287:CDS | 40.0% | |
| AAATGCGGAGGAAAGAAAAG+GGG | - | chr5.4:8632444-8632463 | None:intergenic | 40.0% | |
| AACAAGTGCCCTCCAAAAAA+CGG | + | chr5.4:8636052-8636071 | MS.gene015287:intron | 40.0% | |
| AACTGTTCTACACTAGGTGA+TGG | - | chr5.4:8634068-8634087 | None:intergenic | 40.0% | |
| AAGCTTACCGTAAAGACGAT+GGG | + | chr5.4:8633973-8633992 | MS.gene015287:CDS | 40.0% | |
| AAGTGGAAGGAAACTGCTTA+TGG | - | chr5.4:8632578-8632597 | None:intergenic | 40.0% | |
| ACAATGAACCTTTACCCTGA+GGG | - | chr5.4:8634221-8634240 | None:intergenic | 40.0% | |
| ACATATGTCAGTGTTGTGGT+TGG | + | chr5.4:8632800-8632819 | MS.gene015287:intron | 40.0% | |
| AGAGCATATCCAAGATCCAT+TGG | - | chr5.4:8633490-8633509 | None:intergenic | 40.0% | |
| AGATATGTAATGCTGCCAAC+AGG | - | chr5.4:8638369-8638388 | None:intergenic | 40.0% | |
| AGCCAAAGATTAAACCTACC+AGG | - | chr5.4:8637342-8637361 | None:intergenic | 40.0% | |
| AGCTGGTAGTCATAGTTCAT+TGG | - | chr5.4:8635475-8635494 | None:intergenic | 40.0% | |
| AGGTGAGGAAGTAAATAGAG+AGG | - | chr5.4:8632536-8632555 | None:intergenic | 40.0% | |
| ATAGATGTGGAGTTCATGCT+TGG | + | chr5.4:8634920-8634939 | MS.gene015287:intron | 40.0% | |
| ATGAATCTAGGTAAGGCAGT+CGG | - | chr5.4:8635243-8635262 | None:intergenic | 40.0% | |
| ATGAGGCTAAATGCTTCTAC+AGG | - | chr5.4:8635674-8635693 | None:intergenic | 40.0% | |
| ATGTATCTGCATTGCCACAT+TGG | + | chr5.4:8634348-8634367 | MS.gene015287:intron | 40.0% | |
| ATGTTAATCTGTGCAGGTTG+AGG | + | chr5.4:8638269-8638288 | MS.gene015287:intron | 40.0% | |
| ATTGAATTGAACCCTTCTGC+TGG | + | chr5.4:8633074-8633093 | MS.gene015287:CDS | 40.0% | |
| CAACTACAAACACATGTCAG+AGG | - | chr5.4:8635991-8636010 | None:intergenic | 40.0% | |
| CAAGGTGGAACTTTCACTAA+GGG | + | chr5.4:8633029-8633048 | MS.gene015287:CDS | 40.0% | |
| CACTCCAAATAACACTCTTG+TGG | - | chr5.4:8637280-8637299 | None:intergenic | 40.0% | |
| CCTGCACAGATTAACATGTA+AGG | - | chr5.4:8638266-8638285 | None:intergenic | 40.0% | |
| CCTTACATGTTAATCTGTGC+AGG | + | chr5.4:8638263-8638282 | MS.gene015287:intron | 40.0% | |
| CGTTCAAAAGAGCAAAAGCT+GGG | + | chr5.4:8634820-8634839 | MS.gene015287:intron | 40.0% | |
| CTACAAACATATTTCACGGC+TGG | + | chr5.4:8637316-8637335 | MS.gene015287:intron | 40.0% | |
| CTCTGGTATGTTCGTCATAA+AGG | - | chr5.4:8636572-8636591 | None:intergenic | 40.0% | |
| CTTGTGGCATTAAAGCCAAA+AGG | - | chr5.4:8637264-8637283 | None:intergenic | 40.0% | |
| GAAATGCGGAGGAAAGAAAA+GGG | - | chr5.4:8632445-8632464 | None:intergenic | 40.0% | |
| GAGCATATCCAAGATCCATT+GGG | - | chr5.4:8633489-8633508 | None:intergenic | 40.0% | |
| GAGGAAGGAAAATGAAAGAG+AGG | - | chr5.4:8632517-8632536 | None:intergenic | 40.0% | |
| GAGGAAGTAAATAGAGAGGA+AGG | - | chr5.4:8632532-8632551 | None:intergenic | 40.0% | |
| GAGTACCAAAAATCAGGTGA+TGG | - | chr5.4:8637094-8637113 | None:intergenic | 40.0% | |
| GATAGCAGTGACCTAATAGT+AGG | + | chr5.4:8633460-8633479 | MS.gene015287:intron | 40.0% | |
| GATTTCCTCATCCTGTATTC+TGG | + | chr5.4:8637448-8637467 | MS.gene015287:intron | 40.0% | |
| GCACAAAAGATATTTGGAGG+AGG | + | chr5.4:8636806-8636825 | MS.gene015287:CDS | 40.0% | |
| GCCCAACAGCAAGTTTAATA+TGG | - | chr5.4:8633517-8633536 | None:intergenic | 40.0% | |
| GCTTCAAAGTTCCTTGCTTA+TGG | - | chr5.4:8634437-8634456 | None:intergenic | 40.0% | |
| GGCTCCAATCAATTTGATTG+TGG | + | chr5.4:8635855-8635874 | MS.gene015287:CDS | 40.0% | |
| GGTATGTTCGTCATAAAGGT+CGG | - | chr5.4:8636568-8636587 | None:intergenic | 40.0% | |
| GTACATAGAGCAACCTAACA+TGG | - | chr5.4:8638027-8638046 | None:intergenic | 40.0% | |
| GTATGTTCCCATCGTCTTTA+CGG | - | chr5.4:8633983-8634002 | None:intergenic | 40.0% | |
| GTATGTTCGTCATAAAGGTC+GGG | - | chr5.4:8636567-8636586 | None:intergenic | 40.0% | |
| GTCAAGGGATTGAACAGAAA+AGG | - | chr5.4:8637892-8637911 | None:intergenic | 40.0% | |
| GTCCTGAAGAAAACGCTTTA+CGG | + | chr5.4:8634012-8634031 | MS.gene015287:CDS | 40.0% | |
| GTTAGAGTAATTGTGACAGC+TGG | - | chr5.4:8635492-8635511 | None:intergenic | 40.0% | |
| GTTGGCAGCATTACATATCT+TGG | + | chr5.4:8638369-8638388 | MS.gene015287:CDS | 40.0% | |
| GTTTGTAGTTGTTCTCTCTC+TGG | + | chr5.4:8636000-8636019 | MS.gene015287:intron | 40.0% | |
| TACAATGAACCTTTACCCTG+AGG | - | chr5.4:8634222-8634241 | None:intergenic | 40.0% | |
| TACTGCAGCATAGTTTCCAA+TGG | - | chr5.4:8635929-8635948 | None:intergenic | 40.0% | |
| TAGATGTTCAATCCTAGGCA+CGG | - | chr5.4:8633415-8633434 | None:intergenic | 40.0% | |
| TCAAGCTTGCAATTTGCATG+AGG | - | chr5.4:8637149-8637168 | None:intergenic | 40.0% | |
| TCAAGGTGGAACTTTCACTA+AGG | + | chr5.4:8633028-8633047 | MS.gene015287:CDS | 40.0% | |
| TCGTTCAAAAGAGCAAAAGC+TGG | + | chr5.4:8634819-8634838 | MS.gene015287:intron | 40.0% | |
| TGAGCGATAGTGAGAATATG+TGG | - | chr5.4:8635562-8635581 | None:intergenic | 40.0% | |
| TTACACCAGAATACAGGATG+AGG | - | chr5.4:8637456-8637475 | None:intergenic | 40.0% | |
| TTGCCGAGGATAACATGAAT+TGG | + | chr5.4:8638591-8638610 | MS.gene015287:CDS | 40.0% | |
| ! | AACGTTACCCTGAAAGCATA+TGG | - | chr5.4:8637561-8637580 | None:intergenic | 40.0% |
| ! | AAGAAGCATGGAGAACATTG+TGG | - | chr5.4:8632602-8632621 | None:intergenic | 40.0% |
| ! | ACATTGTACTGACAAGCCTA+AGG | - | chr5.4:8635715-8635734 | None:intergenic | 40.0% |
| ! | AGAAGCATGGAGAACATTGT+GGG | - | chr5.4:8632601-8632620 | None:intergenic | 40.0% |
| ! | ATCTTTTGTGCACACAGTCA+AGG | - | chr5.4:8636797-8636816 | None:intergenic | 40.0% |
| ! | GGCCTTATCTCTTCCAATTT+AGG | + | chr5.4:8633602-8633621 | MS.gene015287:intron | 40.0% |
| ! | TGAGTTGGCAGACATAGATT+GGG | + | chr5.4:8632950-8632969 | MS.gene015287:CDS | 40.0% |
| ! | TTTCTGGGAAAATTCATCGC+AGG | - | chr5.4:8638156-8638175 | None:intergenic | 40.0% |
| ! | TTTGAAATTGGGTGCATGAC+AGG | + | chr5.4:8634996-8635015 | MS.gene015287:intron | 40.0% |
| !! | ATAGTTTTGCGACGTCATGT+TGG | + | chr5.4:8635102-8635121 | MS.gene015287:intron | 40.0% |
| !! | ATCCGTAAAGCGTTTTCTTC+AGG | - | chr5.4:8634017-8634036 | None:intergenic | 40.0% |
| !! | CAGTACTAGCCTGTTTTGTA+AGG | - | chr5.4:8633549-8633568 | None:intergenic | 40.0% |
| !! | GTTTTAAACTACGGACAGGT+AGG | + | chr5.4:8633098-8633117 | MS.gene015287:intron | 40.0% |
| !! | TAGTTTTGCGACGTCATGTT+GGG | + | chr5.4:8635103-8635122 | MS.gene015287:intron | 40.0% |
| !! | TGGTGTTTTAAACTACGGAC+AGG | + | chr5.4:8633094-8633113 | MS.gene015287:CDS | 40.0% |
| !! | TTGAGTTGGCAGACATAGAT+TGG | + | chr5.4:8632949-8632968 | MS.gene015287:CDS | 40.0% |
| !!! | GCAAAGTTTCCGTTTTTTGG+AGG | - | chr5.4:8636064-8636083 | None:intergenic | 40.0% |
| AAAGGGGAAGAAAGATGGGA+AGG | - | chr5.4:8632428-8632447 | None:intergenic | 45.0% | |
| AACGCTTTACGGATGAAGAC+GGG | + | chr5.4:8634023-8634042 | MS.gene015287:CDS | 45.0% | |
| AATGAACCTTTACCCTGAGG+GGG | - | chr5.4:8634219-8634238 | None:intergenic | 45.0% | |
| ACACAAAATCACAGGCCTAG+AGG | - | chr5.4:8635175-8635194 | None:intergenic | 45.0% | |
| ACCTAGTGTAGAACAGTTCG+TGG | + | chr5.4:8634070-8634089 | MS.gene015287:CDS | 45.0% | |
| ACCTGTTGGGAACTACTTCA+AGG | + | chr5.4:8634323-8634342 | MS.gene015287:CDS | 45.0% | |
| ACCTTGAAGTAGTTCCCAAC+AGG | - | chr5.4:8634327-8634346 | None:intergenic | 45.0% | |
| ACCTTGAGGGATAGAGAACT+GGG | - | chr5.4:8632476-8632495 | None:intergenic | 45.0% | |
| ACTTTAGTACCTCGAACCCT+TGG | - | chr5.4:8637658-8637677 | None:intergenic | 45.0% | |
| AGAACATTGTGGGAAGTGGA+AGG | - | chr5.4:8632591-8632610 | None:intergenic | 45.0% | |
| AGACATAGATTGGGACAACC+TGG | + | chr5.4:8632959-8632978 | MS.gene015287:CDS | 45.0% | |
| AGACCTTTGCTAATGGGAAG+TGG | + | chr5.4:8634246-8634265 | MS.gene015287:CDS | 45.0% | |
| AGACTTGTCAACTTGCCTCT+AGG | + | chr5.4:8635157-8635176 | MS.gene015287:intron | 45.0% | |
| AGATGTTCAATCCTAGGCAC+GGG | - | chr5.4:8633414-8633433 | None:intergenic | 45.0% | |
| AGGATAGTCCCTTTGATGGA+TGG | - | chr5.4:8637593-8637612 | None:intergenic | 45.0% | |
| ATGCAGTGAGACGATTGAGT+TGG | + | chr5.4:8632935-8632954 | MS.gene015287:intron | 45.0% | |
| ATGGAGAACATTGTGGGAAG+TGG | - | chr5.4:8632595-8632614 | None:intergenic | 45.0% | |
| ATTCCAGCAGTTGAACATCC+AGG | - | chr5.4:8636990-8637009 | None:intergenic | 45.0% | |
| ATTCTCACGCTTCCCATGTT+AGG | + | chr5.4:8638011-8638030 | MS.gene015287:intron | 45.0% | |
| CAAAACAGGCTAGTACTGTG+AGG | + | chr5.4:8633551-8633570 | MS.gene015287:intron | 45.0% | |
| CAAAACCGGATTGTAAGGTG+AGG | + | chr5.4:8633334-8633353 | MS.gene015287:intron | 45.0% | |
| CAATGAACCTTTACCCTGAG+GGG | - | chr5.4:8634220-8634239 | None:intergenic | 45.0% | |
| CCATTGGGTCACCTACTATT+AGG | - | chr5.4:8633474-8633493 | None:intergenic | 45.0% | |
| CCTAATAGTAGGTGACCCAA+TGG | + | chr5.4:8633471-8633490 | MS.gene015287:intron | 45.0% | |
| CTAACTCAACCCTGCAAAAC+CGG | + | chr5.4:8633320-8633339 | MS.gene015287:intron | 45.0% | |
| GACATAGATTGGGACAACCT+GGG | + | chr5.4:8632960-8632979 | MS.gene015287:CDS | 45.0% | |
| GACATCGTGTAATAGCGTCA+GGG | + | chr5.4:8635299-8635318 | MS.gene015287:intron | 45.0% | |
| GCAATCCTCACCTTACAATC+CGG | - | chr5.4:8633342-8633361 | None:intergenic | 45.0% | |
| GCTTGAGTCCGCAACTATTA+AGG | + | chr5.4:8635205-8635224 | MS.gene015287:intron | 45.0% | |
| GGAAATGCGGAGGAAAGAAA+AGG | - | chr5.4:8632446-8632465 | None:intergenic | 45.0% | |
| GGCCTGGTAGGTTTAATCTT+TGG | + | chr5.4:8637337-8637356 | MS.gene015287:intron | 45.0% | |
| GTGAACAAGCCTCAGTTAGT+GGG | - | chr5.4:8634738-8634757 | None:intergenic | 45.0% | |
| TACCTTGAGGGATAGAGAAC+TGG | - | chr5.4:8632477-8632496 | None:intergenic | 45.0% | |
| TAGTCGAATGCCAGTAAGTG+CGG | - | chr5.4:8632390-8632409 | None:intergenic | 45.0% | |
| TATAACGGCACTACAGTAGC+AGG | - | chr5.4:8633687-8633706 | None:intergenic | 45.0% | |
| TATCCTCGATTCCTCGTCAA+GGG | - | chr5.4:8637907-8637926 | None:intergenic | 45.0% | |
| TCCACGAACTGTTCTACACT+AGG | - | chr5.4:8634074-8634093 | None:intergenic | 45.0% | |
| TGAATCTAGGTAAGGCAGTC+GGG | - | chr5.4:8635242-8635261 | None:intergenic | 45.0% | |
| TGACATCGTGTAATAGCGTC+AGG | + | chr5.4:8635298-8635317 | MS.gene015287:intron | 45.0% | |
| TGCTGGACCCAAAATAGATG+TGG | + | chr5.4:8634907-8634926 | MS.gene015287:intron | 45.0% | |
| TGTGAACAAGCCTCAGTTAG+TGG | - | chr5.4:8634739-8634758 | None:intergenic | 45.0% | |
| TTACCTGGATGTTCAACTGC+TGG | + | chr5.4:8636984-8637003 | MS.gene015287:intron | 45.0% | |
| TTCTGTTCAATCCCTTGACG+AGG | + | chr5.4:8637893-8637912 | MS.gene015287:intron | 45.0% | |
| ! | ACCTTACAATCCGGTTTTGC+AGG | - | chr5.4:8633333-8633352 | None:intergenic | 45.0% |
| ! | AGGGATAGAGAACTGGGTTT+TGG | - | chr5.4:8632470-8632489 | None:intergenic | 45.0% |
| ! | CATCTAGAGCGTGATTTGAG+TGG | + | chr5.4:8633429-8633448 | MS.gene015287:intron | 45.0% |
| ! | CCTTACAATCCGGTTTTGCA+GGG | - | chr5.4:8633332-8633351 | None:intergenic | 45.0% |
| ! | CGCTCTAGATGTTCAATCCT+AGG | - | chr5.4:8633420-8633439 | None:intergenic | 45.0% |
| ! | CGTTTTCTTCAGGACGAAAG+AGG | - | chr5.4:8634007-8634026 | None:intergenic | 45.0% |
| ! | GAGCTCCATCACCTGATTTT+TGG | + | chr5.4:8637086-8637105 | MS.gene015287:intron | 45.0% |
| ! | GGCAAGTTGACAAGTCTGAA+AGG | - | chr5.4:8635154-8635173 | None:intergenic | 45.0% |
| ! | GGCTTGTTCACACAGTACAA+TGG | + | chr5.4:8634747-8634766 | MS.gene015287:intron | 45.0% |
| ! | GTCTGAGAGCATAAGAAGCA+TGG | - | chr5.4:8632614-8632633 | None:intergenic | 45.0% |
| ! | TAGGTTGAAGACCAAATCCC+AGG | - | chr5.4:8632980-8632999 | None:intergenic | 45.0% |
| !! | ACTGGGTTTTGGTGGAAATG+CGG | - | chr5.4:8632459-8632478 | None:intergenic | 45.0% |
| !! | GATAGAGAACTGGGTTTTGG+TGG | - | chr5.4:8632467-8632486 | None:intergenic | 45.0% |
| !!! | TTTTTCGAGTAATGCCAGGC+AGG | - | chr5.4:8637613-8637632 | None:intergenic | 45.0% |
| !! | ATTAAAAATAATTAAAATGA+AGG | - | chr5.4:8632665-8632684 | None:intergenic | 5.0% |
| AAGATGGGAAGGACAGATCG+AGG | - | chr5.4:8632417-8632436 | None:intergenic | 50.0% | |
| AATCCCTTGACGAGGAATCG+AGG | + | chr5.4:8637901-8637920 | MS.gene015287:intron | 50.0% | |
| ACAACACAGACACTGACGCA+TGG | + | chr5.4:8632734-8632753 | MS.gene015287:intron | 50.0% | |
| ACAGTACAATGGCCCATTGG+TGG | + | chr5.4:8634758-8634777 | MS.gene015287:intron | 50.0% | |
| ACCCAGTTCTCTATCCCTCA+AGG | + | chr5.4:8632472-8632491 | MS.gene015287:CDS | 50.0% | |
| AGAGCGTGATTTGAGTGGCT+TGG | + | chr5.4:8633434-8633453 | MS.gene015287:intron | 50.0% | |
| AGGCAGGATAGTCCCTTTGA+TGG | - | chr5.4:8637597-8637616 | None:intergenic | 50.0% | |
| ATCAAAGGGACTATCCTGCC+TGG | + | chr5.4:8637596-8637615 | MS.gene015287:CDS | 50.0% | |
| ATGAACCTTTACCCTGAGGG+GGG | - | chr5.4:8634218-8634237 | None:intergenic | 50.0% | |
| ATGGGAAGTGGAGCTGTACT+TGG | + | chr5.4:8634258-8634277 | MS.gene015287:CDS | 50.0% | |
| ATGTTCAATCCTAGGCACGG+GGG | - | chr5.4:8633412-8633431 | None:intergenic | 50.0% | |
| ATTGACGTTGCTCGAAGCCA+AGG | + | chr5.4:8637638-8637657 | MS.gene015287:CDS | 50.0% | |
| ATTGGAGCCAAACCTTCCTG+TGG | - | chr5.4:8635844-8635863 | None:intergenic | 50.0% | |
| CAAAGGCAACCCACTAACTG+AGG | + | chr5.4:8634726-8634745 | MS.gene015287:intron | 50.0% | |
| CACACAGTACAATGGCCCAT+TGG | + | chr5.4:8634755-8634774 | MS.gene015287:intron | 50.0% | |
| CCCTGCAAAACCGGATTGTA+AGG | + | chr5.4:8633329-8633348 | MS.gene015287:intron | 50.0% | |
| CTAGCAGAAACAGCAGCAGA+AGG | - | chr5.4:8632636-8632655 | None:intergenic | 50.0% | |
| CTATCCTCGATTCCTCGTCA+AGG | - | chr5.4:8637908-8637927 | None:intergenic | 50.0% | |
| GAACTACATCGTGCAACTCC+TGG | + | chr5.4:8635883-8635902 | MS.gene015287:CDS | 50.0% | |
| GACCCATCTGTAGTCTGGTA+AGG | - | chr5.4:8638571-8638590 | None:intergenic | 50.0% | |
| GATGTTCAATCCTAGGCACG+GGG | - | chr5.4:8633413-8633432 | None:intergenic | 50.0% | |
| GATTGGGACAACCTGGGATT+TGG | + | chr5.4:8632966-8632985 | MS.gene015287:CDS | 50.0% | |
| GCTCCACTTCCCATTAGCAA+AGG | - | chr5.4:8634252-8634271 | None:intergenic | 50.0% | |
| GCTGTGGTTGTATCACCTGT+TGG | + | chr5.4:8638351-8638370 | MS.gene015287:CDS | 50.0% | |
| GGCACTACAGTAGCAGGATT+TGG | - | chr5.4:8633681-8633700 | None:intergenic | 50.0% | |
| GGCCTTACCAGACTACAGAT+GGG | + | chr5.4:8638566-8638585 | MS.gene015287:CDS | 50.0% | |
| GGGGGTTAAGAGTCCCAAAT+TGG | - | chr5.4:8633394-8633413 | None:intergenic | 50.0% | |
| GTAGGTGACCCAATGGATCT+TGG | + | chr5.4:8633478-8633497 | MS.gene015287:intron | 50.0% | |
| GTCAGTGTCTGTGTTGTGTC+TGG | - | chr5.4:8632731-8632750 | None:intergenic | 50.0% | |
| TAAGGCACAGTCTGCAGCAA+AGG | + | chr5.4:8636746-8636765 | MS.gene015287:CDS | 50.0% | |
| TTGACGTTGCTCGAAGCCAA+GGG | + | chr5.4:8637639-8637658 | MS.gene015287:CDS | 50.0% | |
| ! | AACATATTTCACGGCTGGCC+TGG | + | chr5.4:8637321-8637340 | MS.gene015287:intron | 50.0% |
| ! | ACTGGAGGTGTGAAGACCAT+TGG | + | chr5.4:8635910-8635929 | MS.gene015287:CDS | 50.0% |
| ! | CGGTTTTGCAGGGTTGAGTT+AGG | - | chr5.4:8633322-8633341 | None:intergenic | 50.0% |
| ! | TGGCCTTACCAGACTACAGA+TGG | + | chr5.4:8638565-8638584 | MS.gene015287:CDS | 50.0% |
| !! | AGAAAGGTGTACTCTGGAGC+AGG | - | chr5.4:8634291-8634310 | None:intergenic | 50.0% |
| !! | CTCAGTTAGTGGGTTGCCTT+TGG | - | chr5.4:8634728-8634747 | None:intergenic | 50.0% |
| !! | CTTCTGCTGCTGTTTCTGCT+AGG | + | chr5.4:8632634-8632653 | MS.gene015287:CDS | 50.0% |
| ACTACAGATGGGTCTTGCCG+AGG | + | chr5.4:8638577-8638596 | MS.gene015287:CDS | 55.0% | |
| CAGTCTGCAGCAAAGGCGAA+AGG | + | chr5.4:8636753-8636772 | MS.gene015287:CDS | 55.0% | |
| CTACATCGTGCAACTCCTGG+TGG | + | chr5.4:8635886-8635905 | MS.gene015287:CDS | 55.0% | |
| CTTCTGCACAGGAACAGCTG+TGG | + | chr5.4:8638335-8638354 | MS.gene015287:CDS | 55.0% | |
| GGCAAGACCCATCTGTAGTC+TGG | - | chr5.4:8638576-8638595 | None:intergenic | 55.0% | |
| TGAGGAGCGATTAGTGGCAG+TGG | + | chr5.4:8638287-8638306 | MS.gene015287:CDS | 55.0% | |
| TGGTTTCAGATCCCCCCTCA+GGG | + | chr5.4:8634204-8634223 | MS.gene015287:intron | 55.0% | |
| TTGGTTTCAGATCCCCCCTC+AGG | + | chr5.4:8634203-8634222 | MS.gene015287:intron | 55.0% | |
| ! | GCAGGTTGAGGAGCGATTAG+TGG | + | chr5.4:8638281-8638300 | MS.gene015287:intron | 55.0% |
| !! | GGGTTTTGGTGGAAATGCGG+AGG | - | chr5.4:8632456-8632475 | None:intergenic | 55.0% |
| !! | TATTTCACGGCTGGCCTGGT+AGG | + | chr5.4:8637325-8637344 | MS.gene015287:intron | 55.0% |
| CAGATCCCCCCTCAGGGTAA+AGG | + | chr5.4:8634210-8634229 | MS.gene015287:intron | 60.0% | |
| CGAATTGCTCGAGGCAGACG+AGG | + | chr5.4:8638311-8638330 | MS.gene015287:CDS | 60.0% | |
| GACTCTTAACCCCCGTGCCT+AGG | + | chr5.4:8633400-8633419 | MS.gene015287:intron | 60.0% | |
| GCAGACGAGGTCTTCTGCAC+AGG | + | chr5.4:8638324-8638343 | MS.gene015287:CDS | 60.0% | |
| GGATGAAGACGGGTGCAGAG+CGG | + | chr5.4:8634033-8634052 | MS.gene015287:CDS | 60.0% | |
| GGCAGTGGACGAATTGCTCG+AGG | + | chr5.4:8638302-8638321 | MS.gene015287:CDS | 60.0% | |
| TGCTCGAAGCCAAGGGTTCG+AGG | + | chr5.4:8637646-8637665 | MS.gene015287:CDS | 60.0% | |
| TTCACACCTCCAGTGCCACC+AGG | - | chr5.4:8635904-8635923 | None:intergenic | 60.0% | |
| !! | TCAGGTGATGGAGCTCGCTC+TGG | - | chr5.4:8637082-8637101 | None:intergenic | 60.0% |
| CGTGCAACTCCTGGTGGCAC+TGG | + | chr5.4:8635892-8635911 | MS.gene015287:CDS | 65.0% | |
| GAGAGCAGCGCCGCACTTAC+TGG | + | chr5.4:8632377-8632396 | MS.gene015287:CDS | 65.0% | |
| ! | GCAACTCCTGGTGGCACTGG+AGG | + | chr5.4:8635895-8635914 | MS.gene015287:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 8632374 | 8638631 | 8632374 | ID=MS.gene015287 |
| chr5.4 | mRNA | 8632374 | 8638631 | 8632374 | ID=MS.gene015287.t1;Parent=MS.gene015287 |
| chr5.4 | exon | 8632374 | 8632493 | 8632374 | ID=MS.gene015287.t1.exon1;Parent=MS.gene015287.t1 |
| chr5.4 | CDS | 8632374 | 8632493 | 8632374 | ID=cds.MS.gene015287.t1;Parent=MS.gene015287.t1 |
| chr5.4 | exon | 8632573 | 8632655 | 8632573 | ID=MS.gene015287.t1.exon2;Parent=MS.gene015287.t1 |
| chr5.4 | CDS | 8632573 | 8632655 | 8632573 | ID=cds.MS.gene015287.t1;Parent=MS.gene015287.t1 |
| chr5.4 | exon | 8632941 | 8633115 | 8632941 | ID=MS.gene015287.t1.exon3;Parent=MS.gene015287.t1 |
| chr5.4 | CDS | 8632941 | 8633115 | 8632941 | ID=cds.MS.gene015287.t1;Parent=MS.gene015287.t1 |
| chr5.4 | exon | 8633954 | 8634130 | 8633954 | ID=MS.gene015287.t1.exon4;Parent=MS.gene015287.t1 |
| chr5.4 | CDS | 8633954 | 8634130 | 8633954 | ID=cds.MS.gene015287.t1;Parent=MS.gene015287.t1 |
| chr5.4 | exon | 8634213 | 8634344 | 8634213 | ID=MS.gene015287.t1.exon5;Parent=MS.gene015287.t1 |
| chr5.4 | CDS | 8634213 | 8634344 | 8634213 | ID=cds.MS.gene015287.t1;Parent=MS.gene015287.t1 |
| chr5.4 | exon | 8635847 | 8635945 | 8635847 | ID=MS.gene015287.t1.exon6;Parent=MS.gene015287.t1 |
| chr5.4 | CDS | 8635847 | 8635945 | 8635847 | ID=cds.MS.gene015287.t1;Parent=MS.gene015287.t1 |
| chr5.4 | exon | 8636741 | 8636857 | 8636741 | ID=MS.gene015287.t1.exon7;Parent=MS.gene015287.t1 |
| chr5.4 | CDS | 8636741 | 8636857 | 8636741 | ID=cds.MS.gene015287.t1;Parent=MS.gene015287.t1 |
| chr5.4 | exon | 8637572 | 8637667 | 8637572 | ID=MS.gene015287.t1.exon8;Parent=MS.gene015287.t1 |
| chr5.4 | CDS | 8637572 | 8637667 | 8637572 | ID=cds.MS.gene015287.t1;Parent=MS.gene015287.t1 |
| chr5.4 | exon | 8638285 | 8638397 | 8638285 | ID=MS.gene015287.t1.exon9;Parent=MS.gene015287.t1 |
| chr5.4 | CDS | 8638285 | 8638397 | 8638285 | ID=cds.MS.gene015287.t1;Parent=MS.gene015287.t1 |
| chr5.4 | exon | 8638517 | 8638631 | 8638517 | ID=MS.gene015287.t1.exon10;Parent=MS.gene015287.t1 |
| chr5.4 | CDS | 8638517 | 8638631 | 8638517 | ID=cds.MS.gene015287.t1;Parent=MS.gene015287.t1 |
| Gene Sequence |
| Protein sequence |
