Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015612.t1 | XP_003631017.1 | 96 | 806 | 29 | 1 | 1 | 806 | 2 | 804 | 0.00E+00 | 1302 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015612.t1 | Q8RXF1 | 66.5 | 832 | 206 | 12 | 1 | 806 | 1 | 785 | 2.1e-242 | 840.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015612.t1 | G7LCC6 | 96.0 | 806 | 29 | 1 | 1 | 806 | 2 | 804 | 0.0e+00 | 1302.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene013796 | MS.gene015612 | PPI |
| MS.gene06729 | MS.gene015612 | PPI |
| MS.gene015612 | MS.gene003478 | PPI |
| MS.gene015612 | MS.gene03206 | PPI |
| MS.gene06946 | MS.gene015612 | PPI |
| MS.gene02577 | MS.gene015612 | PPI |
| MS.gene73791 | MS.gene015612 | PPI |
| MS.gene022734 | MS.gene015612 | PPI |
| MS.gene015612 | MS.gene013791 | PPI |
| MS.gene057666 | MS.gene015612 | PPI |
| MS.gene73790 | MS.gene015612 | PPI |
| MS.gene46271 | MS.gene015612 | PPI |
| MS.gene013607 | MS.gene015612 | PPI |
| MS.gene39316 | MS.gene015612 | PPI |
| MS.gene015612 | MS.gene46269 | PPI |
| MS.gene015612 | MS.gene020229 | PPI |
| MS.gene015612 | MS.gene52116 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015612.t1 | MTR_8g106170 | 98.015 | 806 | 13 | 1 | 1 | 806 | 2 | 804 | 0.0 | 1587 |
| MS.gene015612.t1 | MTR_7g063860 | 81.568 | 472 | 40 | 4 | 337 | 806 | 1 | 427 | 0.0 | 544 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015612.t1 | AT1G14650 | 67.888 | 819 | 216 | 13 | 1 | 806 | 1 | 785 | 0.0 | 924 |
| MS.gene015612.t1 | AT1G14650 | 67.888 | 819 | 216 | 13 | 1 | 806 | 1 | 785 | 0.0 | 924 |
| MS.gene015612.t1 | AT1G14650 | 67.888 | 819 | 216 | 13 | 1 | 806 | 1 | 785 | 0.0 | 924 |
| MS.gene015612.t1 | AT1G14640 | 61.004 | 777 | 253 | 15 | 1 | 769 | 1 | 735 | 0.0 | 776 |
| MS.gene015612.t1 | AT1G14640 | 61.004 | 777 | 253 | 15 | 1 | 769 | 1 | 735 | 0.0 | 776 |
| MS.gene015612.t1 | AT4G16200 | 33.333 | 258 | 115 | 4 | 54 | 254 | 10 | 267 | 4.06e-34 | 132 |
| MS.gene015612.t1 | AT5G12280 | 51.034 | 145 | 50 | 3 | 653 | 797 | 294 | 417 | 9.90e-33 | 132 |
| MS.gene015612.t1 | AT5G12280 | 28.352 | 261 | 131 | 9 | 61 | 320 | 89 | 294 | 2.70e-13 | 73.2 |
| MS.gene015612.t1 | AT5G06520 | 34.630 | 257 | 111 | 7 | 59 | 312 | 395 | 597 | 1.87e-32 | 134 |
| MS.gene015612.t1 | AT5G06520 | 25.896 | 251 | 158 | 5 | 68 | 310 | 92 | 322 | 1.74e-14 | 77.8 |
| MS.gene015612.t1 | AT5G06520 | 35.329 | 167 | 84 | 5 | 179 | 343 | 79 | 223 | 2.83e-14 | 77.4 |
| MS.gene015612.t1 | AT5G06890 | 57.333 | 75 | 20 | 3 | 724 | 797 | 2 | 65 | 2.14e-16 | 74.7 |
| MS.gene015612.t1 | AT3G49130 | 36.269 | 193 | 88 | 8 | 136 | 323 | 15 | 177 | 1.46e-15 | 79.0 |
| MS.gene015612.t1 | AT2G43960 | 25.373 | 268 | 156 | 8 | 61 | 319 | 9 | 241 | 7.88e-13 | 72.0 |
| MS.gene015612.t1 | AT3G27600 | 27.200 | 250 | 135 | 9 | 73 | 322 | 2 | 204 | 3.57e-12 | 68.9 |
Find 281 sgRNAs with CRISPR-Local
Find 316 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAGTGGTTTCTCGAATTT+TGG | 0.123945 | 4.1:-1233312 | None:intergenic |
| GATCCCTGAGGATAAATTTC+TGG | 0.240740 | 4.1:+1234084 | MS.gene015612:CDS |
| ACATCGTTACTATCAGTTTC+TGG | 0.250973 | 4.1:-1232387 | None:intergenic |
| TGTTCTGACATTTCACTAAT+AGG | 0.261909 | 4.1:-1233233 | None:intergenic |
| GCTTCCTCAGGTGGCGGCGG+TGG | 0.262509 | 4.1:-1234001 | None:intergenic |
| CTTTCCTTACTGGTTTAAAC+TGG | 0.265112 | 4.1:-1232440 | None:intergenic |
| TGTTTCTGCCTCTTCGGTTC+TGG | 0.276276 | 4.1:-1234046 | None:intergenic |
| AGCAACCTAAGCAGGTTATA+TGG | 0.279454 | 4.1:+1233459 | MS.gene015612:CDS |
| TTGGTTTCATGAAATGAAAT+TGG | 0.291074 | 4.1:-1232617 | None:intergenic |
| AGCTTCTCTGTCAACCCCTT+TGG | 0.304697 | 4.1:-1232702 | None:intergenic |
| CTTCCTCAGGTGGCGGCGGT+GGG | 0.310077 | 4.1:-1234000 | None:intergenic |
| GGATCAAGTACTTTCCTTAC+TGG | 0.310295 | 4.1:-1232450 | None:intergenic |
| AGGCTTCCTGAAGGCATTAC+AGG | 0.313448 | 4.1:+1232498 | MS.gene015612:CDS |
| CTCAATTTCTGCTTGTTAGC+AGG | 0.319229 | 4.1:-1234378 | None:intergenic |
| TGGTTTCATGAAATGAAATT+GGG | 0.327351 | 4.1:-1232616 | None:intergenic |
| TCTTTCTGTTCTTTGTACTT+AGG | 0.329702 | 4.1:-1233278 | None:intergenic |
| CAAGCAATGTCACAGAATAT+TGG | 0.332342 | 4.1:+1233518 | MS.gene015612:CDS |
| TCAACAATGTTTCTAATGTC+TGG | 0.333016 | 4.1:-1232153 | None:intergenic |
| TCCTCAGGTGGCGGCGGTGG+GGG | 0.333801 | 4.1:-1233998 | None:intergenic |
| AAGGGAAGAAGAGTGAAGTC+AGG | 0.334414 | 4.1:+1233087 | MS.gene015612:CDS |
| ATTGGAAGGCCAATGCTATT+AGG | 0.334626 | 4.1:-1233707 | None:intergenic |
| TAAGGGATTCTGATGATGTT+AGG | 0.341202 | 4.1:+1231952 | None:intergenic |
| ACTTGTCAATCCAGTCAAAA+AGG | 0.342104 | 4.1:-1232577 | None:intergenic |
| TTAAACTGGGCAGAAATATC+AGG | 0.343919 | 4.1:-1232426 | None:intergenic |
| TCCATTTCTACTTCCTTCCC+TGG | 0.346519 | 4.1:-1232996 | None:intergenic |
| TGGTTATTCATAGGAATTGA+TGG | 0.349393 | 4.1:-1233848 | None:intergenic |
| TGACCCTTGAGGAGGTTATA+AGG | 0.349562 | 4.1:+1232934 | MS.gene015612:CDS |
| CAATATTCTGTGACATTGCT+TGG | 0.353663 | 4.1:-1233517 | None:intergenic |
| CCTCACCCTCCTCCACCATC+AGG | 0.353930 | 4.1:+1233932 | MS.gene015612:CDS |
| GGGATTCCTTGGTTATTCAT+AGG | 0.354710 | 4.1:-1233857 | None:intergenic |
| AGATTTCCTTCATCAACATT+AGG | 0.356214 | 4.1:-1234267 | None:intergenic |
| TCCTCCCCTGTAATGCCTTC+AGG | 0.361482 | 4.1:-1232504 | None:intergenic |
| GTTCTGGTTCCTCTGGAAGC+GGG | 0.364838 | 4.1:-1234030 | None:intergenic |
| GATCCAGGTGGTGGAGGAAT+GGG | 0.366946 | 4.1:-1233878 | None:intergenic |
| GGCACTCCTTGAGGCGGAGG+TGG | 0.370443 | 4.1:-1233977 | None:intergenic |
| ACAATCCTAATCGGTGGTTC+AGG | 0.371459 | 4.1:-1233122 | None:intergenic |
| TCGTCATGTTTCTGCCTCTT+CGG | 0.382991 | 4.1:-1234052 | None:intergenic |
| GTGCTGATAATATGCATGAT+AGG | 0.383722 | 4.1:-1232280 | None:intergenic |
| CACAATTTGTGGCTCGTAAC+GGG | 0.388021 | 4.1:+1232550 | MS.gene015612:CDS |
| CAGTTCTTCACAATCCTAAT+CGG | 0.396930 | 4.1:-1233131 | None:intergenic |
| AAATCTCAAAGGGCAAGTTC+TGG | 0.400007 | 4.1:+1234284 | MS.gene015612:CDS |
| GGCATCTGCATTGGAGGAGG+AGG | 0.400365 | 4.1:-1233779 | None:intergenic |
| AGAGGTTTCCAATGCTGTTA+AGG | 0.406420 | 4.1:+1233412 | MS.gene015612:CDS |
| TGCATTGGAGGAGGAGGGGC+TGG | 0.408585 | 4.1:-1233773 | None:intergenic |
| CCTCCCACTGATGGAAATCT+TGG | 0.411347 | 4.1:+1232003 | MS.gene015612:CDS |
| TTCCTCAGGTGGCGGCGGTG+GGG | 0.412252 | 4.1:-1233999 | None:intergenic |
| CGATTAGGATTGTGAAGAAC+TGG | 0.415914 | 4.1:+1233132 | MS.gene015612:CDS |
| TACAAATGGCTATGATTGAT+TGG | 0.416626 | 4.1:+1232844 | MS.gene015612:CDS |
| TTCTCTGTCAACCCCTTTGG+AGG | 0.417441 | 4.1:-1232699 | None:intergenic |
| ACTCCTTGAGGCGGAGGTGG+TGG | 0.417600 | 4.1:-1233974 | None:intergenic |
| TCTGCAGGAAGCCTGTCTTC+TGG | 0.418705 | 4.1:-1233161 | None:intergenic |
| CTCTTGAGTGAGTTGAGCCT+CGG | 0.419908 | 4.1:-1232034 | None:intergenic |
| AGTCCAGGTGGTGGCGGAAG+AGG | 0.422752 | 4.1:-1233635 | None:intergenic |
| CTGCCCAGTTTAAACCAGTA+AGG | 0.427365 | 4.1:+1232436 | MS.gene015612:CDS |
| GTGAGTTGAGCCTCGGGGAG+AGG | 0.428016 | 4.1:-1232027 | None:intergenic |
| GGAGGAGGTGCAGCAGGACC+AGG | 0.431521 | 4.1:-1233587 | None:intergenic |
| CTTGCACATTACAATGTTAG+TGG | 0.432552 | 4.1:+1234435 | MS.gene015612:CDS |
| GGAGGTGGTGGATGCATCAT+AGG | 0.433352 | 4.1:-1233962 | None:intergenic |
| CGCTTGGACGGCAATGATGA+AGG | 0.435735 | 4.1:+1233068 | MS.gene015612:CDS |
| GGTTCTGGTTCCTCTGGAAG+CGG | 0.435880 | 4.1:-1234031 | None:intergenic |
| CCATTCCCTCTTTAACAAGC+TGG | 0.436500 | 4.1:-1233037 | None:intergenic |
| CCAGGTCTTGGTGGAGGCAT+TGG | 0.437144 | 4.1:-1233725 | None:intergenic |
| AAAGCTTACAGCACAATTTG+TGG | 0.438188 | 4.1:+1232539 | MS.gene015612:CDS |
| CTCTTCGGTTCTGGTTCCTC+TGG | 0.439569 | 4.1:-1234037 | None:intergenic |
| GTGGAGGAATGGGGATTCCT+TGG | 0.440391 | 4.1:-1233868 | None:intergenic |
| TAGAGATTCAACCAAGTTTG+TGG | 0.441618 | 4.1:+1233184 | MS.gene015612:CDS |
| AGATCCAGGTGGTGGAGGAA+TGG | 0.444234 | 4.1:-1233879 | None:intergenic |
| TAGGAATTGATGGATGCATT+GGG | 0.444523 | 4.1:-1233838 | None:intergenic |
| CTCAACGGTATCTTCTTCCA+TGG | 0.446855 | 4.1:-1232973 | None:intergenic |
| AAGACCCTGAACCACCGATT+AGG | 0.451674 | 4.1:+1233117 | MS.gene015612:CDS |
| GATTGCATCATGTGCATGCC+AGG | 0.454391 | 4.1:-1233743 | None:intergenic |
| GCAACCTAAGCAGGTTATAT+GGG | 0.454626 | 4.1:+1233460 | MS.gene015612:CDS |
| AAAACATTGTTGGACTTGCT+CGG | 0.455205 | 4.1:+1233357 | MS.gene015612:CDS |
| CCACCAGGCATCTGCATTGG+AGG | 0.455548 | 4.1:-1233785 | None:intergenic |
| AATTTCAGCCTTAACAGCAT+TGG | 0.456041 | 4.1:-1233420 | None:intergenic |
| GGAGCATAAGGTCGTGGAAC+AGG | 0.458312 | 4.1:-1233911 | None:intergenic |
| TTGGAGGAGGAGGGGCTGGC+CGG | 0.461945 | 4.1:-1233769 | None:intergenic |
| GAAGAAGATACCGTTGAGCC+AGG | 0.465828 | 4.1:+1232978 | MS.gene015612:CDS |
| GGAATCAGTTCACCGGTGAT+AGG | 0.466222 | 4.1:-1233212 | None:intergenic |
| CCTCCTCCAATGCAGATGCC+TGG | 0.466446 | 4.1:+1233782 | MS.gene015612:CDS |
| GCCAGGGAAGGAAGTAGAAA+TGG | 0.466913 | 4.1:+1232995 | MS.gene015612:CDS |
| GAAGGAAGTAGAAATGGAAA+TGG | 0.467583 | 4.1:+1233001 | MS.gene015612:CDS |
| ATCATGTGCATGCCAGGTCT+TGG | 0.468081 | 4.1:-1233737 | None:intergenic |
| TCTGCTTGTTAGCAGGGAGT+TGG | 0.468431 | 4.1:-1234371 | None:intergenic |
| ATCATCCCTGATGGTGGAGG+AGG | 0.469881 | 4.1:-1233938 | None:intergenic |
| GGTCTTGGAGGAGGTGCAGC+AGG | 0.470671 | 4.1:-1233593 | None:intergenic |
| CAATCTTCTACTCAACAACC+TGG | 0.470871 | 4.1:+1232330 | MS.gene015612:CDS |
| TCAATTTCTGCTTGTTAGCA+GGG | 0.474049 | 4.1:-1234377 | None:intergenic |
| GGAGGAGGGTGAGGAGCATA+AGG | 0.475146 | 4.1:-1233923 | None:intergenic |
| GCCACACACACTAGAACTAT+AGG | 0.476734 | 4.1:+1232114 | MS.gene015612:CDS |
| TCTTGAGTGAGTTGAGCCTC+GGG | 0.481923 | 4.1:-1232033 | None:intergenic |
| AGGCATTACAGGGGAGGAGC+TGG | 0.482536 | 4.1:+1232509 | MS.gene015612:CDS |
| CATTCCCTCTTTAACAAGCT+GGG | 0.482811 | 4.1:-1233036 | None:intergenic |
| CCATCCCATATAACCTGCTT+AGG | 0.482921 | 4.1:-1233464 | None:intergenic |
| TAAATTTCTGGCTCAGCATC+CGG | 0.483958 | 4.1:+1234096 | MS.gene015612:CDS |
| AGAGCAAGAAAGAATACAAA+TGG | 0.484421 | 4.1:+1232830 | MS.gene015612:CDS |
| CGTCCTCTTCCGCCACCACC+TGG | 0.485094 | 4.1:+1233632 | MS.gene015612:CDS |
| ATATTGTCCTTGAGAAAGCC+TGG | 0.486427 | 4.1:-1234408 | None:intergenic |
| GGAGCTTCCTCAGGTGGCGG+CGG | 0.486510 | 4.1:-1234004 | None:intergenic |
| AGAGGCCCAGCTTGTTAAAG+AGG | 0.486869 | 4.1:+1233031 | MS.gene015612:CDS |
| TCAAGCACGGTAGCCATGTC+GGG | 0.487343 | 4.1:-1232738 | None:intergenic |
| TGTCGGTGTTTCTTCCTCGA+TGG | 0.488894 | 4.1:-1232085 | None:intergenic |
| TCTCAGTTCGTTGCTAAGAA+TGG | 0.490258 | 4.1:+1232183 | MS.gene015612:CDS |
| ACTGTATACTGCTCAGCCTC+AGG | 0.491545 | 4.1:-1232474 | None:intergenic |
| GGAGGAGCTTCCTCAGGTGG+CGG | 0.491552 | 4.1:-1234007 | None:intergenic |
| CCTGATGGTGGAGGAGGGTG+AGG | 0.492235 | 4.1:-1233932 | None:intergenic |
| GGGAATGGATGCTGTTCGCT+TGG | 0.492256 | 4.1:+1233052 | MS.gene015612:CDS |
| AACTGAGATCCAGGTGGTGG+AGG | 0.493314 | 4.1:-1233884 | None:intergenic |
| TTCTGGTTCCTCTGGAAGCG+GGG | 0.494469 | 4.1:-1234029 | None:intergenic |
| AAATGATGAGCAACCTAAGC+AGG | 0.494557 | 4.1:+1233451 | MS.gene015612:CDS |
| AGGATTATCGCTAGTAATGC+GGG | 0.497434 | 4.1:+1232222 | MS.gene015612:CDS |
| TTTCCATCAGTGGGAGGAGC+GGG | 0.498622 | 4.1:-1231997 | None:intergenic |
| TGAGTTGAGCCTCGGGGAGA+GGG | 0.498729 | 4.1:-1232026 | None:intergenic |
| TACTTCCTTCCCTGGCTCAA+CGG | 0.498862 | 4.1:-1232988 | None:intergenic |
| ATAGGAATTGATGGATGCAT+TGG | 0.501574 | 4.1:-1233839 | None:intergenic |
| GGACGAACTGAAGGCATACC+AGG | 0.501660 | 4.1:-1233614 | None:intergenic |
| GGAGCGGGTAAAGGCAGTAT+AGG | 0.501929 | 4.1:-1231982 | None:intergenic |
| TTGGTTGAATCTCTATCTGC+AGG | 0.504250 | 4.1:-1233176 | None:intergenic |
| CAATCCTAATCGGTGGTTCA+GGG | 0.505409 | 4.1:-1233121 | None:intergenic |
| TTCTCCTTATAACCTCCTCA+AGG | 0.506795 | 4.1:-1232938 | None:intergenic |
| TGAGCCAGAAATTTATCCTC+AGG | 0.508604 | 4.1:-1234088 | None:intergenic |
| ATGTGCATGCCAGGTCTTGG+TGG | 0.509096 | 4.1:-1233734 | None:intergenic |
| ATCCCCATTCCTCCACCACC+TGG | 0.509097 | 4.1:+1233875 | MS.gene015612:CDS |
| GCATCTGCATTGGAGGAGGA+GGG | 0.511428 | 4.1:-1233778 | None:intergenic |
| TCCTCAAGGGTCATCGGAGG+AGG | 0.511903 | 4.1:-1232924 | None:intergenic |
| ACAGGAGTGAACTGAGATCC+AGG | 0.513045 | 4.1:-1233893 | None:intergenic |
| TTACTATCAGTTTCTGGCGC+AGG | 0.513316 | 4.1:-1232381 | None:intergenic |
| AGTAGAAATGGAAATGGATG+AGG | 0.515451 | 4.1:+1233007 | MS.gene015612:CDS |
| CTATCAGTTTCTGGCGCAGG+TGG | 0.516657 | 4.1:-1232378 | None:intergenic |
| TCAGTGGGAGGAGCGGGTAA+AGG | 0.517550 | 4.1:-1231991 | None:intergenic |
| TCTGTTCCTAATGTTGATGA+AGG | 0.520094 | 4.1:+1234261 | MS.gene015612:CDS |
| AATGGAAATGGATGAGGAAG+AGG | 0.520372 | 4.1:+1233013 | MS.gene015612:CDS |
| CCTTGCCGATGCATATTCAA+AGG | 0.520439 | 4.1:+1232668 | MS.gene015612:CDS |
| CAAAATTCGAGAAACCACTT+TGG | 0.520666 | 4.1:+1233313 | MS.gene015612:CDS |
| CGGTGTTTCTTCCTCGATGG+AGG | 0.522913 | 4.1:-1232082 | None:intergenic |
| TTACCCGCTCCTCCCACTGA+TGG | 0.523195 | 4.1:+1231994 | MS.gene015612:CDS |
| TCGAGAAACCACTTTGGCAC+AGG | 0.523521 | 4.1:+1233319 | MS.gene015612:CDS |
| TTCAAGCACGGTAGCCATGT+CGG | 0.524285 | 4.1:-1232739 | None:intergenic |
| CTCAAGAGGAGGTGGAGGAG+AGG | 0.526883 | 4.1:+1232049 | MS.gene015612:CDS |
| ATGGATGCTGTTCGCTTGGA+CGG | 0.528226 | 4.1:+1233056 | MS.gene015612:CDS |
| ACATTGCTTGGTTTGCAGTA+CGG | 0.529795 | 4.1:-1233505 | None:intergenic |
| TGGATTGAGGAAATTAAACT+TGG | 0.530219 | 4.1:-1232250 | None:intergenic |
| CTCACCCTCCTCCACCATCA+GGG | 0.533364 | 4.1:+1233933 | MS.gene015612:CDS |
| TATTCTAATCCTAATAGCAT+TGG | 0.533446 | 4.1:+1233698 | MS.gene015612:CDS |
| GAAGGCATACCAGGTCTTGG+AGG | 0.534350 | 4.1:-1233605 | None:intergenic |
| CATCTGCATTGGAGGAGGAG+GGG | 0.535322 | 4.1:-1233777 | None:intergenic |
| GATGTGTGAATAGGCTGGAA+TGG | 0.536148 | 4.1:+1232763 | MS.gene015612:CDS |
| ACTGAAGGCATACCAGGTCT+TGG | 0.536230 | 4.1:-1233608 | None:intergenic |
| GGTTTCATGAAATGAAATTG+GGG | 0.538125 | 4.1:-1232615 | None:intergenic |
| TCCTATAGTTCTAGTGTGTG+TGG | 0.538991 | 4.1:-1232115 | None:intergenic |
| GATAGGGATCGGATGGATTG+AGG | 0.539119 | 4.1:-1232263 | None:intergenic |
| ATGGTCTTGAATTCGAAAAG+AGG | 0.539264 | 4.1:+1232202 | MS.gene015612:CDS |
| ACAAGAGCAAGCTAGGCAAA+AGG | 0.539404 | 4.1:+1232794 | MS.gene015612:CDS |
| TGTCCACCAGGCATCTGCAT+TGG | 0.540056 | 4.1:-1233788 | None:intergenic |
| GATAGGAGAAACCACAAACT+TGG | 0.541207 | 4.1:-1233195 | None:intergenic |
| GAGGAGGTGCAGCAGGACCA+GGG | 0.541548 | 4.1:-1233586 | None:intergenic |
| GGGTGAGGAGCATAAGGTCG+TGG | 0.541806 | 4.1:-1233917 | None:intergenic |
| GGGTGGTTGACCACCCATCA+TGG | 0.542510 | 4.1:-1233816 | None:intergenic |
| CCAATGCCTCCACCAAGACC+TGG | 0.544824 | 4.1:+1233725 | MS.gene015612:CDS |
| AGGCTGAGCAGTATACAGTT+AGG | 0.544863 | 4.1:+1232478 | MS.gene015612:CDS |
| AGGGAAGAAGAGTGAAGTCA+GGG | 0.544952 | 4.1:+1233088 | MS.gene015612:CDS |
| CAGAAATTGAGTGGAAAACC+AGG | 0.545592 | 4.1:+1234390 | MS.gene015612:CDS |
| TGCACATGATGCAATCTCTC+CGG | 0.546274 | 4.1:+1233750 | MS.gene015612:CDS |
| TTTGTGGTTTCTCCTATCAC+CGG | 0.546292 | 4.1:+1233200 | MS.gene015612:CDS |
| TTTGACTGGATTGACAAGTA+GGG | 0.547049 | 4.1:+1232581 | MS.gene015612:CDS |
| ATCATGCATATTATCAGCAC+AGG | 0.547508 | 4.1:+1232283 | MS.gene015612:CDS |
| AATGTAAACATGCTGTGAGT+TGG | 0.547838 | 4.1:-1232636 | None:intergenic |
| GGCTTCCTGAAGGCATTACA+GGG | 0.548226 | 4.1:+1232499 | MS.gene015612:CDS |
| CACCACGCTCTCTCAAGGCT+AGG | 0.548324 | 4.1:-1234473 | None:intergenic |
| TTGATGAAGGAAATCTCAAA+GGG | 0.550388 | 4.1:+1234274 | MS.gene015612:CDS |
| CCAGGCATCTGCATTGGAGG+AGG | 0.550786 | 4.1:-1233782 | None:intergenic |
| GTGAACTGAGATCCAGGTGG+TGG | 0.552277 | 4.1:-1233887 | None:intergenic |
| TTCATCATCCTGTGCCAAAG+TGG | 0.553580 | 4.1:-1233327 | None:intergenic |
| ATGTTTCTAATGTCTGGAGG+GGG | 0.553778 | 4.1:-1232147 | None:intergenic |
| ATAACCTCCTCAAGGGTCAT+CGG | 0.554958 | 4.1:-1232930 | None:intergenic |
| TGCATGCCAGGTCTTGGTGG+AGG | 0.556352 | 4.1:-1233731 | None:intergenic |
| CATGTTATGCATAGGCCCAC+GGG | 0.557167 | 4.1:-1233672 | None:intergenic |
| TATGCATGATAGGGATCGGA+TGG | 0.558648 | 4.1:-1232270 | None:intergenic |
| CAATGTTTCTAATGTCTGGA+GGG | 0.560753 | 4.1:-1232149 | None:intergenic |
| ACTGGAAGAGACCAGAAGAC+AGG | 0.560860 | 4.1:+1233150 | MS.gene015612:CDS |
| GTTGATGAAGGAAATCTCAA+AGG | 0.560862 | 4.1:+1234273 | MS.gene015612:CDS |
| GGCATACCAGGTCTTGGAGG+AGG | 0.561127 | 4.1:-1233602 | None:intergenic |
| GTGTGTGTGGCAACAGTTGT+CGG | 0.561561 | 4.1:-1232102 | None:intergenic |
| TCAACTCACTCAAGAGGAGG+TGG | 0.562226 | 4.1:+1232041 | MS.gene015612:CDS |
| CCAGCTTGTTAAAGAGGGAA+TGG | 0.563367 | 4.1:+1233037 | MS.gene015612:CDS |
| TCTGGTTCCTCTGGAAGCGG+GGG | 0.564783 | 4.1:-1234028 | None:intergenic |
| AAAGCTAGTCCAGGTGGTGG+CGG | 0.566441 | 4.1:-1233641 | None:intergenic |
| ACTCACTCAAGAGGAGGTGG+AGG | 0.566569 | 4.1:+1232044 | MS.gene015612:CDS |
| GCACAATTTGTGGCTCGTAA+CGG | 0.567217 | 4.1:+1232549 | MS.gene015612:CDS |
| TGAAAGATGTGTGAATAGGC+TGG | 0.567577 | 4.1:+1232758 | MS.gene015612:CDS |
| GGCATCATCCCTGATGGTGG+AGG | 0.567611 | 4.1:-1233941 | None:intergenic |
| GAATATTGCATGTTATGCAT+AGG | 0.567763 | 4.1:-1233680 | None:intergenic |
| AGCGTTCACAAGAGCAAGCT+AGG | 0.568094 | 4.1:+1232787 | MS.gene015612:CDS |
| TCTACCACCACGCTCTCTCA+AGG | 0.569307 | 4.1:-1234478 | None:intergenic |
| ATCATGGAATGTTGTCCACC+AGG | 0.571946 | 4.1:-1233800 | None:intergenic |
| GATGGTCACAGTGGTAGTAT+TGG | 0.574108 | 4.1:+1233482 | MS.gene015612:CDS |
| TCAACGGTATCTTCTTCCAT+GGG | 0.575775 | 4.1:-1232972 | None:intergenic |
| GCATGTTATGCATAGGCCCA+CGG | 0.576194 | 4.1:-1233673 | None:intergenic |
| TGCTGATAATATGCATGATA+GGG | 0.577580 | 4.1:-1232279 | None:intergenic |
| ATGTGTGAATAGGCTGGAAT+GGG | 0.578972 | 4.1:+1232764 | MS.gene015612:CDS |
| ATAATATGCATGATAGGGAT+CGG | 0.580636 | 4.1:-1232274 | None:intergenic |
| GTTCTCTACAGGGACCTGCT+CGG | 0.580926 | 4.1:+1234229 | MS.gene015612:intron |
| CATCCACCACCTCCGCCTCA+AGG | 0.581195 | 4.1:+1233971 | MS.gene015612:CDS |
| AATCTTCTACTCAACAACCT+GGG | 0.581999 | 4.1:+1232331 | MS.gene015612:CDS |
| CAATCTCTGTCTGAAACTGT+TGG | 0.583138 | 4.1:+1234318 | MS.gene015612:CDS |
| GCTTGGACGGCAATGATGAA+GGG | 0.583265 | 4.1:+1233069 | MS.gene015612:CDS |
| TGCTTGAAAGATGTGTGAAT+AGG | 0.583530 | 4.1:+1232754 | MS.gene015612:CDS |
| GGCGGAAGAGGACGAACTGA+AGG | 0.584239 | 4.1:-1233623 | None:intergenic |
| ATCCAGGTGGTGGAGGAATG+GGG | 0.589884 | 4.1:-1233877 | None:intergenic |
| GCTGCACCTCCTCCAAGACC+TGG | 0.589894 | 4.1:+1233596 | MS.gene015612:CDS |
| CCTAAGCAGGTTATATGGGA+TGG | 0.590606 | 4.1:+1233464 | MS.gene015612:CDS |
| AGCATTGGAAACCTCTTCCT+CGG | 0.590624 | 4.1:-1233405 | None:intergenic |
| CAAAACCTTTGAATATGCAT+CGG | 0.591581 | 4.1:-1232673 | None:intergenic |
| GGGCCAAGATTTCCATCAGT+GGG | 0.591807 | 4.1:-1232006 | None:intergenic |
| ACCACGCTCTCTCAAGGCTA+GGG | 0.592917 | 4.1:-1234472 | None:intergenic |
| GTCTTGGTGGAGGCATTGGA+AGG | 0.593881 | 4.1:-1233721 | None:intergenic |
| TGGTGGACAACATTCCATGA+TGG | 0.593958 | 4.1:+1233802 | MS.gene015612:CDS |
| TTCAAAGCTAGTCCAGGTGG+TGG | 0.596324 | 4.1:-1233644 | None:intergenic |
| GTCACAGAATATTGGAAGTG+AGG | 0.597524 | 4.1:+1233526 | MS.gene015612:CDS |
| ACAGATATACTGATCCGAGC+AGG | 0.598888 | 4.1:-1234243 | None:intergenic |
| CGAGGCTCAACTCACTCAAG+AGG | 0.599376 | 4.1:+1232035 | MS.gene015612:CDS |
| GGTAGATTCAAAGCTAGTCC+AGG | 0.601016 | 4.1:-1233650 | None:intergenic |
| ACAATGTTTCTAATGTCTGG+AGG | 0.601626 | 4.1:-1232150 | None:intergenic |
| AATGTTTCTAATGTCTGGAG+GGG | 0.603125 | 4.1:-1232148 | None:intergenic |
| AGATACCGTTGAGCCAGGGA+AGG | 0.606017 | 4.1:+1232983 | MS.gene015612:CDS |
| TGAAACTGTTGGCAGCCTGA+AGG | 0.606065 | 4.1:+1234329 | MS.gene015612:CDS |
| TTCTTCACAATCCTAATCGG+TGG | 0.607876 | 4.1:-1233128 | None:intergenic |
| ACTAATAGGAATCAGTTCAC+CGG | 0.608792 | 4.1:-1233219 | None:intergenic |
| CCTCCAATGCAGATGCCTGG+TGG | 0.609030 | 4.1:+1233785 | MS.gene015612:CDS |
| CTTTGAATATGCATCGGCAA+GGG | 0.609693 | 4.1:-1232667 | None:intergenic |
| GGCTCAACTCACTCAAGAGG+AGG | 0.609831 | 4.1:+1232038 | MS.gene015612:CDS |
| GAGAAGCAAGATGACGCCCA+TGG | 0.609864 | 4.1:+1232956 | MS.gene015612:CDS |
| TCCTGAAGGCATTACAGGGG+AGG | 0.611198 | 4.1:+1232503 | MS.gene015612:CDS |
| TTTCCTTACTGGTTTAAACT+GGG | 0.611741 | 4.1:-1232439 | None:intergenic |
| TGGAAAACCAGGCTTTCTCA+AGG | 0.613141 | 4.1:+1234401 | MS.gene015612:CDS |
| GGTGGACAACATTCCATGAT+GGG | 0.613612 | 4.1:+1233803 | MS.gene015612:CDS |
| CCTTTGAATATGCATCGGCA+AGG | 0.614216 | 4.1:-1232668 | None:intergenic |
| ATTTCCATCAGTGGGAGGAG+CGG | 0.614809 | 4.1:-1231998 | None:intergenic |
| TCCCTAGCCTTGAGAGAGCG+TGG | 0.616920 | 4.1:+1234471 | MS.gene015612:CDS |
| ATCATAGGCATCATCCCTGA+TGG | 0.617198 | 4.1:-1233947 | None:intergenic |
| GGAATTGATGGATGCATTGG+GGG | 0.617363 | 4.1:-1233836 | None:intergenic |
| TCTAGTAGAGCAGAATCCCC+AGG | 0.618285 | 4.1:-1232348 | None:intergenic |
| GAGGCCCAGCTTGTTAAAGA+GGG | 0.618696 | 4.1:+1233032 | MS.gene015612:CDS |
| GCTAACAAGCAGAAATTGAG+TGG | 0.618988 | 4.1:+1234381 | MS.gene015612:CDS |
| GAGGATTATCGCTAGTAATG+CGG | 0.622030 | 4.1:+1232221 | MS.gene015612:CDS |
| ATAGGCATCATCCCTGATGG+TGG | 0.623826 | 4.1:-1233944 | None:intergenic |
| GTTTCATGAAATGAAATTGG+GGG | 0.624393 | 4.1:-1232614 | None:intergenic |
| TCATCCCTGATGGTGGAGGA+GGG | 0.624606 | 4.1:-1233937 | None:intergenic |
| TAGCTTTGAATCTACCCCGT+GGG | 0.625593 | 4.1:+1233657 | MS.gene015612:CDS |
| TCAATTCCTATGAATAACCA+AGG | 0.629776 | 4.1:+1233851 | MS.gene015612:CDS |
| ATTCACACATCTTTCAAGCA+CGG | 0.630916 | 4.1:-1232751 | None:intergenic |
| AGGAATTGATGGATGCATTG+GGG | 0.631433 | 4.1:-1233837 | None:intergenic |
| ATCTTCTACTCAACAACCTG+GGG | 0.633425 | 4.1:+1232332 | MS.gene015612:CDS |
| GCACATTACAATGTTAGTGG+AGG | 0.635245 | 4.1:+1234438 | MS.gene015612:CDS |
| GAGCCAGAAATTTATCCTCA+GGG | 0.639239 | 4.1:-1234087 | None:intergenic |
| AGGGCCAAGATTTCCATCAG+TGG | 0.639548 | 4.1:-1232007 | None:intergenic |
| CAGAGGAACCAGAACCGAAG+AGG | 0.642537 | 4.1:+1234038 | MS.gene015612:CDS |
| GTATACTGCTCAGCCTCAGG+AGG | 0.644159 | 4.1:-1232471 | None:intergenic |
| TCCTCCGATGACCCTTGAGG+AGG | 0.644190 | 4.1:+1232926 | MS.gene015612:CDS |
| ACCTCCTCAAGGGTCATCGG+AGG | 0.653141 | 4.1:-1232927 | None:intergenic |
| AAGAAGATACCGTTGAGCCA+GGG | 0.654040 | 4.1:+1232979 | MS.gene015612:CDS |
| ACCTCCTCCGATGACCCTTG+AGG | 0.658282 | 4.1:+1232923 | MS.gene015612:CDS |
| TCTCCTTATAACCTCCTCAA+GGG | 0.658954 | 4.1:-1232937 | None:intergenic |
| GAAAGTACTTGATCCTCCTG+AGG | 0.667068 | 4.1:+1232458 | MS.gene015612:CDS |
| CGATTCTGCTCTGATCCCTG+AGG | 0.667531 | 4.1:+1234072 | MS.gene015612:CDS |
| AAATCTTGGCCCTCTCCCCG+AGG | 0.670276 | 4.1:+1232017 | MS.gene015612:CDS |
| CCAAGATTTCCATCAGTGGG+AGG | 0.670695 | 4.1:-1232003 | None:intergenic |
| TATACAGTTAGGCTTCCTGA+AGG | 0.674309 | 4.1:+1232489 | MS.gene015612:CDS |
| ATTCTTAGCAACGAACTGAG+AGG | 0.675573 | 4.1:-1232181 | None:intergenic |
| CTTGAGTGAGTTGAGCCTCG+GGG | 0.678337 | 4.1:-1232032 | None:intergenic |
| TGTTTCTAATGTCTGGAGGG+GGG | 0.689288 | 4.1:-1232146 | None:intergenic |
| CTAGCCTTGAGAGAGCGTGG+TGG | 0.691451 | 4.1:+1234474 | MS.gene015612:CDS |
| CTAGCTTTGAATCTACCCCG+TGG | 0.691585 | 4.1:+1233656 | MS.gene015612:CDS |
| AGATTCAAAGCTAGTCCAGG+TGG | 0.698870 | 4.1:-1233647 | None:intergenic |
| GCTTCCTGAAGGCATTACAG+GGG | 0.699681 | 4.1:+1232500 | MS.gene015612:CDS |
| GTTATATGGGATGGTCACAG+TGG | 0.709630 | 4.1:+1233473 | MS.gene015612:CDS |
| GAGGTGCAGCAGGACCAGGG+AGG | 0.710329 | 4.1:-1233583 | None:intergenic |
| GAATGAGAGATCCTCCATCG+AGG | 0.720923 | 4.1:+1232071 | MS.gene015612:CDS |
| GGACAACATTCCATGATGGG+TGG | 0.739617 | 4.1:+1233806 | MS.gene015612:CDS |
| ATGTTATGCATAGGCCCACG+GGG | 0.746373 | 4.1:-1233671 | None:intergenic |
| GGAGTGAACTGAGATCCAGG+TGG | 0.837933 | 4.1:-1233890 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGTAATATAAATGTATAAT+TGG | - | chr4.1:1234172-1234191 | None:intergenic | 10.0% |
| !! | TAATATAAATGTATAATTGG+TGG | - | chr4.1:1234169-1234188 | None:intergenic | 15.0% |
| ! | GAAATCTCAAAAAACATTGT+TGG | + | chr4.1:1233347-1233366 | MS.gene015612:CDS | 25.0% |
| ! | TATTCTAATCCTAATAGCAT+TGG | + | chr4.1:1233698-1233717 | MS.gene015612:CDS | 25.0% |
| ! | TGGTTTCATGAAATGAAATT+GGG | - | chr4.1:1232619-1232638 | None:intergenic | 25.0% |
| ! | TTGGTTTCATGAAATGAAAT+TGG | - | chr4.1:1232620-1232639 | None:intergenic | 25.0% |
| AGAGCAAGAAAGAATACAAA+TGG | + | chr4.1:1232830-1232849 | MS.gene015612:CDS | 30.0% | |
| AGATTTCCTTCATCAACATT+AGG | - | chr4.1:1234270-1234289 | None:intergenic | 30.0% | |
| ATAATATGCATGATAGGGAT+CGG | - | chr4.1:1232277-1232296 | None:intergenic | 30.0% | |
| CAAAACCTTTGAATATGCAT+CGG | - | chr4.1:1232676-1232695 | None:intergenic | 30.0% | |
| GAATATTGCATGTTATGCAT+AGG | - | chr4.1:1233683-1233702 | None:intergenic | 30.0% | |
| GGTTTCATGAAATGAAATTG+GGG | - | chr4.1:1232618-1232637 | None:intergenic | 30.0% | |
| GTTTCATGAAATGAAATTGG+GGG | - | chr4.1:1232617-1232636 | None:intergenic | 30.0% | |
| TACAAATGGCTATGATTGAT+TGG | + | chr4.1:1232844-1232863 | MS.gene015612:CDS | 30.0% | |
| TCAATTCCTATGAATAACCA+AGG | + | chr4.1:1233851-1233870 | MS.gene015612:CDS | 30.0% | |
| TCTTTCTGTTCTTTGTACTT+AGG | - | chr4.1:1233281-1233300 | None:intergenic | 30.0% | |
| TGCTGATAATATGCATGATA+GGG | - | chr4.1:1232282-1232301 | None:intergenic | 30.0% | |
| TGGATTGAGGAAATTAAACT+TGG | - | chr4.1:1232253-1232272 | None:intergenic | 30.0% | |
| TGGTTATTCATAGGAATTGA+TGG | - | chr4.1:1233851-1233870 | None:intergenic | 30.0% | |
| TGTTCTGACATTTCACTAAT+AGG | - | chr4.1:1233236-1233255 | None:intergenic | 30.0% | |
| TTGATGAAGGAAATCTCAAA+GGG | + | chr4.1:1234274-1234293 | MS.gene015612:CDS | 30.0% | |
| ! | TCAACAATGTTTCTAATGTC+TGG | - | chr4.1:1232156-1232175 | None:intergenic | 30.0% |
| !! | TTTCCTTACTGGTTTAAACT+GGG | - | chr4.1:1232442-1232461 | None:intergenic | 30.0% |
| AAAGCTTACAGCACAATTTG+TGG | + | chr4.1:1232539-1232558 | MS.gene015612:CDS | 35.0% | |
| AATCTTCTACTCAACAACCT+GGG | + | chr4.1:1232331-1232350 | MS.gene015612:CDS | 35.0% | |
| AATGAATCTAAAAACCTCCC+TGG | + | chr4.1:1233569-1233588 | MS.gene015612:CDS | 35.0% | |
| AATGTAAACATGCTGTGAGT+TGG | - | chr4.1:1232639-1232658 | None:intergenic | 35.0% | |
| AATTTCAGCCTTAACAGCAT+TGG | - | chr4.1:1233423-1233442 | None:intergenic | 35.0% | |
| ACATCGTTACTATCAGTTTC+TGG | - | chr4.1:1232390-1232409 | None:intergenic | 35.0% | |
| ACTAATAGGAATCAGTTCAC+CGG | - | chr4.1:1233222-1233241 | None:intergenic | 35.0% | |
| ACTTGTCAATCCAGTCAAAA+AGG | - | chr4.1:1232580-1232599 | None:intergenic | 35.0% | |
| AGTAGAAATGGAAATGGATG+AGG | + | chr4.1:1233007-1233026 | MS.gene015612:CDS | 35.0% | |
| ATCAAAGTAACTCTCCATAC+CGG | - | chr4.1:1234118-1234137 | None:intergenic | 35.0% | |
| ATCATGCATATTATCAGCAC+AGG | + | chr4.1:1232283-1232302 | MS.gene015612:CDS | 35.0% | |
| ATTCACACATCTTTCAAGCA+CGG | - | chr4.1:1232754-1232773 | None:intergenic | 35.0% | |
| CAAAATTCGAGAAACCACTT+TGG | + | chr4.1:1233313-1233332 | MS.gene015612:CDS | 35.0% | |
| CAAGCAATGTCACAGAATAT+TGG | + | chr4.1:1233518-1233537 | MS.gene015612:CDS | 35.0% | |
| CAATATTCTGTGACATTGCT+TGG | - | chr4.1:1233520-1233539 | None:intergenic | 35.0% | |
| CAGTTCTTCACAATCCTAAT+CGG | - | chr4.1:1233134-1233153 | None:intergenic | 35.0% | |
| CTTGCACATTACAATGTTAG+TGG | + | chr4.1:1234435-1234454 | MS.gene015612:CDS | 35.0% | |
| GAAGGAAGTAGAAATGGAAA+TGG | + | chr4.1:1233001-1233020 | MS.gene015612:CDS | 35.0% | |
| TAGAGATTCAACCAAGTTTG+TGG | + | chr4.1:1233184-1233203 | MS.gene015612:CDS | 35.0% | |
| TCGGTAGTACCAAAAATATC+AGG | - | chr4.1:1233389-1233408 | None:intergenic | 35.0% | |
| TGCTTGAAAGATGTGTGAAT+AGG | + | chr4.1:1232754-1232773 | MS.gene015612:CDS | 35.0% | |
| TTAAACTGGGCAGAAATATC+AGG | - | chr4.1:1232429-1232448 | None:intergenic | 35.0% | |
| TTTGACTGGATTGACAAGTA+GGG | + | chr4.1:1232581-1232600 | MS.gene015612:CDS | 35.0% | |
| ! | AAAACATTGTTGGACTTGCT+CGG | + | chr4.1:1233357-1233376 | MS.gene015612:CDS | 35.0% |
| ! | AATAGATTTTGCTGACGATG+AGG | + | chr4.1:1232890-1232909 | MS.gene015612:CDS | 35.0% |
| ! | AATGTTTCTAATGTCTGGAG+GGG | - | chr4.1:1232151-1232170 | None:intergenic | 35.0% |
| ! | ACAATGTTTCTAATGTCTGG+AGG | - | chr4.1:1232153-1232172 | None:intergenic | 35.0% |
| ! | ATAGGAATTGATGGATGCAT+TGG | - | chr4.1:1233842-1233861 | None:intergenic | 35.0% |
| ! | ATGGTCTTGAATTCGAAAAG+AGG | + | chr4.1:1232202-1232221 | MS.gene015612:CDS | 35.0% |
| ! | CAAAGTGGTTTCTCGAATTT+TGG | - | chr4.1:1233315-1233334 | None:intergenic | 35.0% |
| ! | CAATGTTTCTAATGTCTGGA+GGG | - | chr4.1:1232152-1232171 | None:intergenic | 35.0% |
| ! | GATTGATTGGCATGATTTTG+TGG | + | chr4.1:1232857-1232876 | MS.gene015612:CDS | 35.0% |
| ! | GTGCTGATAATATGCATGAT+AGG | - | chr4.1:1232283-1232302 | None:intergenic | 35.0% |
| ! | GTTGATGAAGGAAATCTCAA+AGG | + | chr4.1:1234273-1234292 | MS.gene015612:CDS | 35.0% |
| ! | TAGGAATTGATGGATGCATT+GGG | - | chr4.1:1233841-1233860 | None:intergenic | 35.0% |
| ! | TCAATTTCTGCTTGTTAGCA+GGG | - | chr4.1:1234380-1234399 | None:intergenic | 35.0% |
| ! | TCTGTTCCTAATGTTGATGA+AGG | + | chr4.1:1234261-1234280 | MS.gene015612:CDS | 35.0% |
| !! | CTTTCCTTACTGGTTTAAAC+TGG | - | chr4.1:1232443-1232462 | None:intergenic | 35.0% |
| !! | TTTTGACTGGATTGACAAGT+AGG | + | chr4.1:1232580-1232599 | MS.gene015612:CDS | 35.0% |
| !!! | TGATATTTTTGGTACTACCG+AGG | + | chr4.1:1233388-1233407 | MS.gene015612:CDS | 35.0% |
| AAATCTCAAAGGGCAAGTTC+TGG | + | chr4.1:1234284-1234303 | MS.gene015612:CDS | 40.0% | |
| AAATGATGAGCAACCTAAGC+AGG | + | chr4.1:1233451-1233470 | MS.gene015612:CDS | 40.0% | |
| AATGGAAATGGATGAGGAAG+AGG | + | chr4.1:1233013-1233032 | MS.gene015612:CDS | 40.0% | |
| AGAGGTTTCCAATGCTGTTA+AGG | + | chr4.1:1233412-1233431 | MS.gene015612:CDS | 40.0% | |
| AGCAACCTAAGCAGGTTATA+TGG | + | chr4.1:1233459-1233478 | MS.gene015612:CDS | 40.0% | |
| AGCCTGAAGGAAAAAATTGC+TGG | + | chr4.1:1234342-1234361 | MS.gene015612:CDS | 40.0% | |
| AGGATTATCGCTAGTAATGC+GGG | + | chr4.1:1232222-1232241 | MS.gene015612:CDS | 40.0% | |
| ATATTGTCCTTGAGAAAGCC+TGG | - | chr4.1:1234411-1234430 | None:intergenic | 40.0% | |
| ATCTTCTACTCAACAACCTG+GGG | + | chr4.1:1232332-1232351 | MS.gene015612:CDS | 40.0% | |
| ATGTGTGAATAGGCTGGAAT+GGG | + | chr4.1:1232764-1232783 | MS.gene015612:CDS | 40.0% | |
| ATTCTTAGCAACGAACTGAG+AGG | - | chr4.1:1232184-1232203 | None:intergenic | 40.0% | |
| ATTGGAAGGCCAATGCTATT+AGG | - | chr4.1:1233710-1233729 | None:intergenic | 40.0% | |
| CAATCTTCTACTCAACAACC+TGG | + | chr4.1:1232330-1232349 | MS.gene015612:CDS | 40.0% | |
| CAGAAATTGAGTGGAAAACC+AGG | + | chr4.1:1234390-1234409 | MS.gene015612:CDS | 40.0% | |
| CATTCCCTCTTTAACAAGCT+GGG | - | chr4.1:1233039-1233058 | None:intergenic | 40.0% | |
| CCTGAAGGAAAAAATTGCTG+GGG | + | chr4.1:1234344-1234363 | MS.gene015612:CDS | 40.0% | |
| CGATTAGGATTGTGAAGAAC+TGG | + | chr4.1:1233132-1233151 | MS.gene015612:CDS | 40.0% | |
| GAGCCAGAAATTTATCCTCA+GGG | - | chr4.1:1234090-1234109 | None:intergenic | 40.0% | |
| GAGGATTATCGCTAGTAATG+CGG | + | chr4.1:1232221-1232240 | MS.gene015612:CDS | 40.0% | |
| GATAGGAGAAACCACAAACT+TGG | - | chr4.1:1233198-1233217 | None:intergenic | 40.0% | |
| GATCCCTGAGGATAAATTTC+TGG | + | chr4.1:1234084-1234103 | MS.gene015612:CDS | 40.0% | |
| GCAACCTAAGCAGGTTATAT+GGG | + | chr4.1:1233460-1233479 | MS.gene015612:CDS | 40.0% | |
| GCACATTACAATGTTAGTGG+AGG | + | chr4.1:1234438-1234457 | MS.gene015612:CDS | 40.0% | |
| GCCTGAAGGAAAAAATTGCT+GGG | + | chr4.1:1234343-1234362 | MS.gene015612:CDS | 40.0% | |
| GCTAACAAGCAGAAATTGAG+TGG | + | chr4.1:1234381-1234400 | MS.gene015612:CDS | 40.0% | |
| GGATCAAGTACTTTCCTTAC+TGG | - | chr4.1:1232453-1232472 | None:intergenic | 40.0% | |
| GGGATTCCTTGGTTATTCAT+AGG | - | chr4.1:1233860-1233879 | None:intergenic | 40.0% | |
| GTCACAGAATATTGGAAGTG+AGG | + | chr4.1:1233526-1233545 | MS.gene015612:CDS | 40.0% | |
| GTTAGAATAGCATCAGTAGC+AGG | - | chr4.1:1234201-1234220 | None:intergenic | 40.0% | |
| TATACAGTTAGGCTTCCTGA+AGG | + | chr4.1:1232489-1232508 | MS.gene015612:CDS | 40.0% | |
| TCAACGGTATCTTCTTCCAT+GGG | - | chr4.1:1232975-1232994 | None:intergenic | 40.0% | |
| TCTCAGTTCGTTGCTAAGAA+TGG | + | chr4.1:1232183-1232202 | MS.gene015612:CDS | 40.0% | |
| TCTCCTTATAACCTCCTCAA+GGG | - | chr4.1:1232940-1232959 | None:intergenic | 40.0% | |
| TGAAAGATGTGTGAATAGGC+TGG | + | chr4.1:1232758-1232777 | MS.gene015612:CDS | 40.0% | |
| TGAGCCAGAAATTTATCCTC+AGG | - | chr4.1:1234091-1234110 | None:intergenic | 40.0% | |
| TTCTCCTTATAACCTCCTCA+AGG | - | chr4.1:1232941-1232960 | None:intergenic | 40.0% | |
| TTCTTCACAATCCTAATCGG+TGG | - | chr4.1:1233131-1233150 | None:intergenic | 40.0% | |
| TTGGTTGAATCTCTATCTGC+AGG | - | chr4.1:1233179-1233198 | None:intergenic | 40.0% | |
| TTTGTGGTTTCTCCTATCAC+CGG | + | chr4.1:1233200-1233219 | MS.gene015612:CDS | 40.0% | |
| ! | AACGGGAAATCCTTTTTGAC+TGG | + | chr4.1:1232567-1232586 | MS.gene015612:CDS | 40.0% |
| ! | AACTGCCATTTGTTCTCTAC+AGG | + | chr4.1:1234218-1234237 | MS.gene015612:intron | 40.0% |
| ! | ACTGCCATTTGTTCTCTACA+GGG | + | chr4.1:1234219-1234238 | MS.gene015612:intron | 40.0% |
| ! | AGGAATTGATGGATGCATTG+GGG | - | chr4.1:1233840-1233859 | None:intergenic | 40.0% |
| ! | ATGTTTCTAATGTCTGGAGG+GGG | - | chr4.1:1232150-1232169 | None:intergenic | 40.0% |
| ! | CAATCTCTGTCTGAAACTGT+TGG | + | chr4.1:1234318-1234337 | MS.gene015612:CDS | 40.0% |
| ! | CTCAATTTCTGCTTGTTAGC+AGG | - | chr4.1:1234381-1234400 | None:intergenic | 40.0% |
| ! | CTTTGAATATGCATCGGCAA+GGG | - | chr4.1:1232670-1232689 | None:intergenic | 40.0% |
| ! | TGATTGGCATGATTTTGTGG+TGG | + | chr4.1:1232860-1232879 | MS.gene015612:CDS | 40.0% |
| !! | AAAGGTTTTGATGCCTCCAA+AGG | + | chr4.1:1232686-1232705 | MS.gene015612:CDS | 40.0% |
| !! | AAGGTTTTGATGCCTCCAAA+GGG | + | chr4.1:1232687-1232706 | MS.gene015612:CDS | 40.0% |
| !! | ACATTGCTTGGTTTGCAGTA+CGG | - | chr4.1:1233508-1233527 | None:intergenic | 40.0% |
| !! | TAAATTTCTGGCTCAGCATC+CGG | + | chr4.1:1234096-1234115 | MS.gene015612:CDS | 40.0% |
| !! | TCCTATAGTTCTAGTGTGTG+TGG | - | chr4.1:1232118-1232137 | None:intergenic | 40.0% |
| AAGAAGATACCGTTGAGCCA+GGG | + | chr4.1:1232979-1232998 | MS.gene015612:CDS | 45.0% | |
| AAGGGAAGAAGAGTGAAGTC+AGG | + | chr4.1:1233087-1233106 | MS.gene015612:CDS | 45.0% | |
| ACAAGAGCAAGCTAGGCAAA+AGG | + | chr4.1:1232794-1232813 | MS.gene015612:CDS | 45.0% | |
| ACAATCCTAATCGGTGGTTC+AGG | - | chr4.1:1233125-1233144 | None:intergenic | 45.0% | |
| ACAGATATACTGATCCGAGC+AGG | - | chr4.1:1234246-1234265 | None:intergenic | 45.0% | |
| AGATTCAAAGCTAGTCCAGG+TGG | - | chr4.1:1233650-1233669 | None:intergenic | 45.0% | |
| AGGCTGAGCAGTATACAGTT+AGG | + | chr4.1:1232478-1232497 | MS.gene015612:CDS | 45.0% | |
| AGGGAAGAAGAGTGAAGTCA+GGG | + | chr4.1:1233088-1233107 | MS.gene015612:CDS | 45.0% | |
| AGGTCCCTGTAGAGAACAAA+TGG | - | chr4.1:1234226-1234245 | None:intergenic | 45.0% | |
| ATAACCTCCTCAAGGGTCAT+CGG | - | chr4.1:1232933-1232952 | None:intergenic | 45.0% | |
| ATCATAGGCATCATCCCTGA+TGG | - | chr4.1:1233950-1233969 | None:intergenic | 45.0% | |
| ATCATGGAATGTTGTCCACC+AGG | - | chr4.1:1233803-1233822 | None:intergenic | 45.0% | |
| CAATCCTAATCGGTGGTTCA+GGG | - | chr4.1:1233124-1233143 | None:intergenic | 45.0% | |
| CACAATTTGTGGCTCGTAAC+GGG | + | chr4.1:1232550-1232569 | MS.gene015612:CDS | 45.0% | |
| CCATCCCATATAACCTGCTT+AGG | - | chr4.1:1233467-1233486 | None:intergenic | 45.0% | |
| CCATTCCCTCTTTAACAAGC+TGG | - | chr4.1:1233040-1233059 | None:intergenic | 45.0% | |
| CCTAAGCAGGTTATATGGGA+TGG | + | chr4.1:1233464-1233483 | MS.gene015612:CDS | 45.0% | |
| CCTTGCCGATGCATATTCAA+AGG | + | chr4.1:1232668-1232687 | MS.gene015612:CDS | 45.0% | |
| CTCAACGGTATCTTCTTCCA+TGG | - | chr4.1:1232976-1232995 | None:intergenic | 45.0% | |
| CTGCCCAGTTTAAACCAGTA+AGG | + | chr4.1:1232436-1232455 | MS.gene015612:CDS | 45.0% | |
| GATGGTCACAGTGGTAGTAT+TGG | + | chr4.1:1233482-1233501 | MS.gene015612:CDS | 45.0% | |
| GATGTGTGAATAGGCTGGAA+TGG | + | chr4.1:1232763-1232782 | MS.gene015612:CDS | 45.0% | |
| GCACAATTTGTGGCTCGTAA+CGG | + | chr4.1:1232549-1232568 | MS.gene015612:CDS | 45.0% | |
| GCCACACACACTAGAACTAT+AGG | + | chr4.1:1232114-1232133 | MS.gene015612:CDS | 45.0% | |
| GGTAGATTCAAAGCTAGTCC+AGG | - | chr4.1:1233653-1233672 | None:intergenic | 45.0% | |
| GGTGGACAACATTCCATGAT+GGG | + | chr4.1:1233803-1233822 | MS.gene015612:CDS | 45.0% | |
| GTTATATGGGATGGTCACAG+TGG | + | chr4.1:1233473-1233492 | MS.gene015612:CDS | 45.0% | |
| TATGCATGATAGGGATCGGA+TGG | - | chr4.1:1232273-1232292 | None:intergenic | 45.0% | |
| TCCATTTCTACTTCCTTCCC+TGG | - | chr4.1:1232999-1233018 | None:intergenic | 45.0% | |
| TGACCCTTGAGGAGGTTATA+AGG | + | chr4.1:1232934-1232953 | MS.gene015612:CDS | 45.0% | |
| TGCACATGATGCAATCTCTC+CGG | + | chr4.1:1233750-1233769 | MS.gene015612:CDS | 45.0% | |
| TGGAAAACCAGGCTTTCTCA+AGG | + | chr4.1:1234401-1234420 | MS.gene015612:CDS | 45.0% | |
| TTCATCATCCTGTGCCAAAG+TGG | - | chr4.1:1233330-1233349 | None:intergenic | 45.0% | |
| ! | AGCATTGGAAACCTCTTCCT+CGG | - | chr4.1:1233408-1233427 | None:intergenic | 45.0% |
| ! | CCTTTGAATATGCATCGGCA+AGG | - | chr4.1:1232671-1232690 | None:intergenic | 45.0% |
| ! | CGGACTCGTCCTGATATTTT+TGG | + | chr4.1:1233377-1233396 | MS.gene015612:CDS | 45.0% |
| ! | GAAAAAGAGTGTACCCGACA+TGG | + | chr4.1:1232725-1232744 | MS.gene015612:CDS | 45.0% |
| ! | GGAATTGATGGATGCATTGG+GGG | - | chr4.1:1233839-1233858 | None:intergenic | 45.0% |
| ! | TCGTCATGTTTCTGCCTCTT+CGG | - | chr4.1:1234055-1234074 | None:intergenic | 45.0% |
| ! | TGGTGGACAACATTCCATGA+TGG | + | chr4.1:1233802-1233821 | MS.gene015612:CDS | 45.0% |
| ! | TGTTTCTAATGTCTGGAGGG+GGG | - | chr4.1:1232149-1232168 | None:intergenic | 45.0% |
| ! | TTTTGGTACTACCGAGGAAG+AGG | + | chr4.1:1233394-1233413 | MS.gene015612:CDS | 45.0% |
| !! | AGGTTTTGATGCCTCCAAAG+GGG | + | chr4.1:1232688-1232707 | MS.gene015612:CDS | 45.0% |
| !! | CCAGCTTGTTAAAGAGGGAA+TGG | + | chr4.1:1233037-1233056 | MS.gene015612:CDS | 45.0% |
| !! | GAAAGTACTTGATCCTCCTG+AGG | + | chr4.1:1232458-1232477 | MS.gene015612:CDS | 45.0% |
| !! | TAGCTTTGAATCTACCCCGT+GGG | + | chr4.1:1233657-1233676 | MS.gene015612:CDS | 45.0% |
| !! | TTACTATCAGTTTCTGGCGC+AGG | - | chr4.1:1232384-1232403 | None:intergenic | 45.0% |
| !!! | CCCCAGCAATTTTTTCCTTC+AGG | - | chr4.1:1234347-1234366 | None:intergenic | 45.0% |
| ACAGGAGTGAACTGAGATCC+AGG | - | chr4.1:1233896-1233915 | None:intergenic | 50.0% | |
| ACTGGAAGAGACCAGAAGAC+AGG | + | chr4.1:1233150-1233169 | MS.gene015612:CDS | 50.0% | |
| ACTGTATACTGCTCAGCCTC+AGG | - | chr4.1:1232477-1232496 | None:intergenic | 50.0% | |
| AGCGTTCACAAGAGCAAGCT+AGG | + | chr4.1:1232787-1232806 | MS.gene015612:CDS | 50.0% | |
| AGCTTCTCTGTCAACCCCTT+TGG | - | chr4.1:1232705-1232724 | None:intergenic | 50.0% | |
| AGGGCCAAGATTTCCATCAG+TGG | - | chr4.1:1232010-1232029 | None:intergenic | 50.0% | |
| ATAGGCATCATCCCTGATGG+TGG | - | chr4.1:1233947-1233966 | None:intergenic | 50.0% | |
| ATCATGTGCATGCCAGGTCT+TGG | - | chr4.1:1233740-1233759 | None:intergenic | 50.0% | |
| ATGGATGCTGTTCGCTTGGA+CGG | + | chr4.1:1233056-1233075 | MS.gene015612:CDS | 50.0% | |
| ATGTTATGCATAGGCCCACG+GGG | - | chr4.1:1233674-1233693 | None:intergenic | 50.0% | |
| ATTTCCATCAGTGGGAGGAG+CGG | - | chr4.1:1232001-1232020 | None:intergenic | 50.0% | |
| CATGTTATGCATAGGCCCAC+GGG | - | chr4.1:1233675-1233694 | None:intergenic | 50.0% | |
| CCAAGATTTCCATCAGTGGG+AGG | - | chr4.1:1232006-1232025 | None:intergenic | 50.0% | |
| CCTCCCACTGATGGAAATCT+TGG | + | chr4.1:1232003-1232022 | MS.gene015612:CDS | 50.0% | |
| GAAGAAGATACCGTTGAGCC+AGG | + | chr4.1:1232978-1232997 | MS.gene015612:CDS | 50.0% | |
| GAATGAGAGATCCTCCATCG+AGG | + | chr4.1:1232071-1232090 | MS.gene015612:CDS | 50.0% | |
| GATTGCATCATGTGCATGCC+AGG | - | chr4.1:1233746-1233765 | None:intergenic | 50.0% | |
| GCATGTTATGCATAGGCCCA+CGG | - | chr4.1:1233676-1233695 | None:intergenic | 50.0% | |
| GCCAGGGAAGGAAGTAGAAA+TGG | + | chr4.1:1232995-1233014 | MS.gene015612:CDS | 50.0% | |
| GCTTGGACGGCAATGATGAA+GGG | + | chr4.1:1233069-1233088 | MS.gene015612:CDS | 50.0% | |
| GGAATCAGTTCACCGGTGAT+AGG | - | chr4.1:1233215-1233234 | None:intergenic | 50.0% | |
| GGGCCAAGATTTCCATCAGT+GGG | - | chr4.1:1232009-1232028 | None:intergenic | 50.0% | |
| GTGTGTGTGGCAACAGTTGT+CGG | - | chr4.1:1232105-1232124 | None:intergenic | 50.0% | |
| TACTTCCTTCCCTGGCTCAA+CGG | - | chr4.1:1232991-1233010 | None:intergenic | 50.0% | |
| TCAACTCACTCAAGAGGAGG+TGG | + | chr4.1:1232041-1232060 | MS.gene015612:CDS | 50.0% | |
| TCGAGAAACCACTTTGGCAC+AGG | + | chr4.1:1233319-1233338 | MS.gene015612:CDS | 50.0% | |
| TCTAGTAGAGCAGAATCCCC+AGG | - | chr4.1:1232351-1232370 | None:intergenic | 50.0% | |
| TGAAACTGTTGGCAGCCTGA+AGG | + | chr4.1:1234329-1234348 | MS.gene015612:CDS | 50.0% | |
| TTCAAAGCTAGTCCAGGTGG+TGG | - | chr4.1:1233647-1233666 | None:intergenic | 50.0% | |
| TTCAAGCACGGTAGCCATGT+CGG | - | chr4.1:1232742-1232761 | None:intergenic | 50.0% | |
| TTCTCTGTCAACCCCTTTGG+AGG | - | chr4.1:1232702-1232721 | None:intergenic | 50.0% | |
| ! | AAGACCCTGAACCACCGATT+AGG | + | chr4.1:1233117-1233136 | MS.gene015612:CDS | 50.0% |
| ! | ACTGAAGGCATACCAGGTCT+TGG | - | chr4.1:1233611-1233630 | None:intergenic | 50.0% |
| ! | ATTGATGGATGCATTGGGGG+TGG | - | chr4.1:1233836-1233855 | None:intergenic | 50.0% |
| ! | CTCTTGAGTGAGTTGAGCCT+CGG | - | chr4.1:1232037-1232056 | None:intergenic | 50.0% |
| ! | GGACAACATTCCATGATGGG+TGG | + | chr4.1:1233806-1233825 | MS.gene015612:CDS | 50.0% |
| ! | TCTGCTTGTTAGCAGGGAGT+TGG | - | chr4.1:1234374-1234393 | None:intergenic | 50.0% |
| ! | TCTTGAGTGAGTTGAGCCTC+GGG | - | chr4.1:1232036-1232055 | None:intergenic | 50.0% |
| ! | TGTCGGTGTTTCTTCCTCGA+TGG | - | chr4.1:1232088-1232107 | None:intergenic | 50.0% |
| ! | TGTTTCTGCCTCTTCGGTTC+TGG | - | chr4.1:1234049-1234068 | None:intergenic | 50.0% |
| !! | AGAGGCCCAGCTTGTTAAAG+AGG | + | chr4.1:1233031-1233050 | MS.gene015612:CDS | 50.0% |
| !! | AGGCTTCCTGAAGGCATTAC+AGG | + | chr4.1:1232498-1232517 | MS.gene015612:CDS | 50.0% |
| !! | CTAGCTTTGAATCTACCCCG+TGG | + | chr4.1:1233656-1233675 | MS.gene015612:CDS | 50.0% |
| !! | GAGGCCCAGCTTGTTAAAGA+GGG | + | chr4.1:1233032-1233051 | MS.gene015612:CDS | 50.0% |
| !! | GATAGGGATCGGATGGATTG+AGG | - | chr4.1:1232266-1232285 | None:intergenic | 50.0% |
| !! | GCTTCCTGAAGGCATTACAG+GGG | + | chr4.1:1232500-1232519 | MS.gene015612:CDS | 50.0% |
| !! | GGCTTCCTGAAGGCATTACA+GGG | + | chr4.1:1232499-1232518 | MS.gene015612:CDS | 50.0% |
| ACCACGCTCTCTCAAGGCTA+GGG | - | chr4.1:1234475-1234494 | None:intergenic | 55.0% | |
| ACTCACTCAAGAGGAGGTGG+AGG | + | chr4.1:1232044-1232063 | MS.gene015612:CDS | 55.0% | |
| AGATACCGTTGAGCCAGGGA+AGG | + | chr4.1:1232983-1233002 | MS.gene015612:CDS | 55.0% | |
| ATGTGCATGCCAGGTCTTGG+TGG | - | chr4.1:1233737-1233756 | None:intergenic | 55.0% | |
| CAGAGGAACCAGAACCGAAG+AGG | + | chr4.1:1234038-1234057 | MS.gene015612:CDS | 55.0% | |
| CATCTGCATTGGAGGAGGAG+GGG | - | chr4.1:1233780-1233799 | None:intergenic | 55.0% | |
| CGAGGCTCAACTCACTCAAG+AGG | + | chr4.1:1232035-1232054 | MS.gene015612:CDS | 55.0% | |
| CGATTCTGCTCTGATCCCTG+AGG | + | chr4.1:1234072-1234091 | MS.gene015612:CDS | 55.0% | |
| CGCTTGGACGGCAATGATGA+AGG | + | chr4.1:1233068-1233087 | MS.gene015612:CDS | 55.0% | |
| CGGTGTTTCTTCCTCGATGG+AGG | - | chr4.1:1232085-1232104 | None:intergenic | 55.0% | |
| GAGAAGCAAGATGACGCCCA+TGG | + | chr4.1:1232956-1232975 | MS.gene015612:CDS | 55.0% | |
| GCATCTGCATTGGAGGAGGA+GGG | - | chr4.1:1233781-1233800 | None:intergenic | 55.0% | |
| GGAGCATAAGGTCGTGGAAC+AGG | - | chr4.1:1233914-1233933 | None:intergenic | 55.0% | |
| GGAGCGGGTAAAGGCAGTAT+AGG | - | chr4.1:1231985-1232004 | None:intergenic | 55.0% | |
| GGAGTGAACTGAGATCCAGG+TGG | - | chr4.1:1233893-1233912 | None:intergenic | 55.0% | |
| GGCTCAACTCACTCAAGAGG+AGG | + | chr4.1:1232038-1232057 | MS.gene015612:CDS | 55.0% | |
| GGGAATGGATGCTGTTCGCT+TGG | + | chr4.1:1233052-1233071 | MS.gene015612:CDS | 55.0% | |
| GTATACTGCTCAGCCTCAGG+AGG | - | chr4.1:1232474-1232493 | None:intergenic | 55.0% | |
| GTGAACTGAGATCCAGGTGG+TGG | - | chr4.1:1233890-1233909 | None:intergenic | 55.0% | |
| GTGGAGGAATGGGGATTCCT+TGG | - | chr4.1:1233871-1233890 | None:intergenic | 55.0% | |
| GTTCTCTACAGGGACCTGCT+CGG | + | chr4.1:1234229-1234248 | MS.gene015612:intron | 55.0% | |
| TCAAGCACGGTAGCCATGTC+GGG | - | chr4.1:1232741-1232760 | None:intergenic | 55.0% | |
| TCCTCCCCTGTAATGCCTTC+AGG | - | chr4.1:1232507-1232526 | None:intergenic | 55.0% | |
| TCTACCACCACGCTCTCTCA+AGG | - | chr4.1:1234481-1234500 | None:intergenic | 55.0% | |
| TCTGCAGGAAGCCTGTCTTC+TGG | - | chr4.1:1233164-1233183 | None:intergenic | 55.0% | |
| TGTCCACCAGGCATCTGCAT+TGG | - | chr4.1:1233791-1233810 | None:intergenic | 55.0% | |
| TTTCCATCAGTGGGAGGAGC+GGG | - | chr4.1:1232000-1232019 | None:intergenic | 55.0% | |
| ! | AAAGCTAGTCCAGGTGGTGG+CGG | - | chr4.1:1233644-1233663 | None:intergenic | 55.0% |
| ! | AACTGAGATCCAGGTGGTGG+AGG | - | chr4.1:1233887-1233906 | None:intergenic | 55.0% |
| ! | CTTGAGTGAGTTGAGCCTCG+GGG | - | chr4.1:1232035-1232054 | None:intergenic | 55.0% |
| ! | GAAGGCATACCAGGTCTTGG+AGG | - | chr4.1:1233608-1233627 | None:intergenic | 55.0% |
| ! | GGACGAACTGAAGGCATACC+AGG | - | chr4.1:1233617-1233636 | None:intergenic | 55.0% |
| !! | AGATCCAGGTGGTGGAGGAA+TGG | - | chr4.1:1233882-1233901 | None:intergenic | 55.0% |
| !! | ATCATCCCTGATGGTGGAGG+AGG | - | chr4.1:1233941-1233960 | None:intergenic | 55.0% |
| !! | ATCCAGGTGGTGGAGGAATG+GGG | - | chr4.1:1233880-1233899 | None:intergenic | 55.0% |
| !! | CTATCAGTTTCTGGCGCAGG+TGG | - | chr4.1:1232381-1232400 | None:intergenic | 55.0% |
| !! | CTCTTCGGTTCTGGTTCCTC+TGG | - | chr4.1:1234040-1234059 | None:intergenic | 55.0% |
| !! | GATCCAGGTGGTGGAGGAAT+GGG | - | chr4.1:1233881-1233900 | None:intergenic | 55.0% |
| !! | GGAGGTGGTGGATGCATCAT+AGG | - | chr4.1:1233965-1233984 | None:intergenic | 55.0% |
| !! | GGTTCTGGTTCCTCTGGAAG+CGG | - | chr4.1:1234034-1234053 | None:intergenic | 55.0% |
| !! | GTCTTGGTGGAGGCATTGGA+AGG | - | chr4.1:1233724-1233743 | None:intergenic | 55.0% |
| !! | GTTCTGGTTCCTCTGGAAGC+GGG | - | chr4.1:1234033-1234052 | None:intergenic | 55.0% |
| !! | TCATCCCTGATGGTGGAGGA+GGG | - | chr4.1:1233940-1233959 | None:intergenic | 55.0% |
| !! | TCCTGAAGGCATTACAGGGG+AGG | + | chr4.1:1232503-1232522 | MS.gene015612:CDS | 55.0% |
| !! | TTCTGGCTCAGCATCCGGTA+TGG | + | chr4.1:1234101-1234120 | MS.gene015612:intron | 55.0% |
| !! | TTCTGGTTCCTCTGGAAGCG+GGG | - | chr4.1:1234032-1234051 | None:intergenic | 55.0% |
| AAATCTTGGCCCTCTCCCCG+AGG | + | chr4.1:1232017-1232036 | MS.gene015612:CDS | 60.0% | |
| ACCTCCTCAAGGGTCATCGG+AGG | - | chr4.1:1232930-1232949 | None:intergenic | 60.0% | |
| ACCTCCTCCGATGACCCTTG+AGG | + | chr4.1:1232923-1232942 | MS.gene015612:CDS | 60.0% | |
| AGGCATTACAGGGGAGGAGC+TGG | + | chr4.1:1232509-1232528 | MS.gene015612:CDS | 60.0% | |
| ATCCCCATTCCTCCACCACC+TGG | + | chr4.1:1233875-1233894 | MS.gene015612:CDS | 60.0% | |
| CACCACGCTCTCTCAAGGCT+AGG | - | chr4.1:1234476-1234495 | None:intergenic | 60.0% | |
| CCAATGCCTCCACCAAGACC+TGG | + | chr4.1:1233725-1233744 | MS.gene015612:CDS | 60.0% | |
| CCACCAGGCATCTGCATTGG+AGG | - | chr4.1:1233788-1233807 | None:intergenic | 60.0% | |
| CCAGGCATCTGCATTGGAGG+AGG | - | chr4.1:1233785-1233804 | None:intergenic | 60.0% | |
| CCTCCAATGCAGATGCCTGG+TGG | + | chr4.1:1233785-1233804 | MS.gene015612:CDS | 60.0% | |
| CCTCCTCCAATGCAGATGCC+TGG | + | chr4.1:1233782-1233801 | MS.gene015612:CDS | 60.0% | |
| CTCAAGAGGAGGTGGAGGAG+AGG | + | chr4.1:1232049-1232068 | MS.gene015612:CDS | 60.0% | |
| CTCACCCTCCTCCACCATCA+GGG | + | chr4.1:1233933-1233952 | MS.gene015612:CDS | 60.0% | |
| GGCATACCAGGTCTTGGAGG+AGG | - | chr4.1:1233605-1233624 | None:intergenic | 60.0% | |
| GGCATCTGCATTGGAGGAGG+AGG | - | chr4.1:1233782-1233801 | None:intergenic | 60.0% | |
| GGCGGAAGAGGACGAACTGA+AGG | - | chr4.1:1233626-1233645 | None:intergenic | 60.0% | |
| GGGTGGTTGACCACCCATCA+TGG | - | chr4.1:1233819-1233838 | None:intergenic | 60.0% | |
| TCAGTGGGAGGAGCGGGTAA+AGG | - | chr4.1:1231994-1232013 | None:intergenic | 60.0% | |
| TCCTCAAGGGTCATCGGAGG+AGG | - | chr4.1:1232927-1232946 | None:intergenic | 60.0% | |
| TCCTCCGATGACCCTTGAGG+AGG | + | chr4.1:1232926-1232945 | MS.gene015612:CDS | 60.0% | |
| TGCATGCCAGGTCTTGGTGG+AGG | - | chr4.1:1233734-1233753 | None:intergenic | 60.0% | |
| TTACCCGCTCCTCCCACTGA+TGG | + | chr4.1:1231994-1232013 | MS.gene015612:CDS | 60.0% | |
| ! | CCAGGTCTTGGTGGAGGCAT+TGG | - | chr4.1:1233728-1233747 | None:intergenic | 60.0% |
| ! | GGAGGAGGGTGAGGAGCATA+AGG | - | chr4.1:1233926-1233945 | None:intergenic | 60.0% |
| ! | GGGTGAGGAGCATAAGGTCG+TGG | - | chr4.1:1233920-1233939 | None:intergenic | 60.0% |
| ! | TCTGGTTCCTCTGGAAGCGG+GGG | - | chr4.1:1234031-1234050 | None:intergenic | 60.0% |
| ! | TGAGTTGAGCCTCGGGGAGA+GGG | - | chr4.1:1232029-1232048 | None:intergenic | 60.0% |
| !! | CTAGCCTTGAGAGAGCGTGG+TGG | + | chr4.1:1234474-1234493 | MS.gene015612:CDS | 60.0% |
| !! | GGCATCATCCCTGATGGTGG+AGG | - | chr4.1:1233944-1233963 | None:intergenic | 60.0% |
| !! | TCCCTAGCCTTGAGAGAGCG+TGG | + | chr4.1:1234471-1234490 | MS.gene015612:CDS | 60.0% |
| ACTCCTTGAGGCGGAGGTGG+TGG | - | chr4.1:1233977-1233996 | None:intergenic | 65.0% | |
| CATCCACCACCTCCGCCTCA+AGG | + | chr4.1:1233971-1233990 | MS.gene015612:CDS | 65.0% | |
| CCTCACCCTCCTCCACCATC+AGG | + | chr4.1:1233932-1233951 | MS.gene015612:CDS | 65.0% | |
| GCTGCACCTCCTCCAAGACC+TGG | + | chr4.1:1233596-1233615 | MS.gene015612:CDS | 65.0% | |
| GGAGGAGCTTCCTCAGGTGG+CGG | - | chr4.1:1234010-1234029 | None:intergenic | 65.0% | |
| TGCATTGGAGGAGGAGGGGC+TGG | - | chr4.1:1233776-1233795 | None:intergenic | 65.0% | |
| ! | GAGGAGGTGCAGCAGGACCA+GGG | - | chr4.1:1233589-1233608 | None:intergenic | 65.0% |
| ! | GGTCTTGGAGGAGGTGCAGC+AGG | - | chr4.1:1233596-1233615 | None:intergenic | 65.0% |
| ! | GTGAGTTGAGCCTCGGGGAG+AGG | - | chr4.1:1232030-1232049 | None:intergenic | 65.0% |
| !! | AGTCCAGGTGGTGGCGGAAG+AGG | - | chr4.1:1233638-1233657 | None:intergenic | 65.0% |
| !! | CCTGATGGTGGAGGAGGGTG+AGG | - | chr4.1:1233935-1233954 | None:intergenic | 65.0% |
| AGCGGGGGAGGAGCTTCCTC+AGG | - | chr4.1:1234016-1234035 | None:intergenic | 70.0% | |
| AGCTCCTCCCCCGCTTCCAG+AGG | + | chr4.1:1234021-1234040 | MS.gene015612:CDS | 70.0% | |
| CGTCCTCTTCCGCCACCACC+TGG | + | chr4.1:1233632-1233651 | MS.gene015612:CDS | 70.0% | |
| GAGGTGCAGCAGGACCAGGG+AGG | - | chr4.1:1233586-1233605 | None:intergenic | 70.0% | |
| GGCACTCCTTGAGGCGGAGG+TGG | - | chr4.1:1233980-1233999 | None:intergenic | 70.0% | |
| GGGGGAGGAGCTTCCTCAGG+TGG | - | chr4.1:1234013-1234032 | None:intergenic | 70.0% | |
| ! | CTTCCTCAGGTGGCGGCGGT+GGG | - | chr4.1:1234003-1234022 | None:intergenic | 70.0% |
| ! | GGAGCTTCCTCAGGTGGCGG+CGG | - | chr4.1:1234007-1234026 | None:intergenic | 70.0% |
| ! | GGAGGAGGTGCAGCAGGACC+AGG | - | chr4.1:1233590-1233609 | None:intergenic | 70.0% |
| ! | GGTTCCTCTGGAAGCGGGGG+AGG | - | chr4.1:1234028-1234047 | None:intergenic | 70.0% |
| ! | TTCCTCAGGTGGCGGCGGTG+GGG | - | chr4.1:1234002-1234021 | None:intergenic | 70.0% |
| ! | TTGGAGGAGGAGGGGCTGGC+CGG | - | chr4.1:1233772-1233791 | None:intergenic | 70.0% |
| !! | GGTGGGGGCACTCCTTGAGG+CGG | - | chr4.1:1233986-1234005 | None:intergenic | 70.0% |
| ! | GCTTCCTCAGGTGGCGGCGG+TGG | - | chr4.1:1234004-1234023 | None:intergenic | 75.0% |
| ! | TCCTCAGGTGGCGGCGGTGG+GGG | - | chr4.1:1234001-1234020 | None:intergenic | 75.0% |
| !! | GGCGGTGGGGGCACTCCTTG+AGG | - | chr4.1:1233989-1234008 | None:intergenic | 75.0% |
| !! | GGGGGCACTCCTTGAGGCGG+AGG | - | chr4.1:1233983-1234002 | None:intergenic | 75.0% |
| ! | GCCCCCACCGCCGCCACCTG+AGG | + | chr4.1:1233997-1234016 | MS.gene015612:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 1231967 | 1234509 | 1231967 | ID=MS.gene015612 |
| chr4.1 | mRNA | 1231967 | 1234509 | 1231967 | ID=MS.gene015612.t1;Parent=MS.gene015612 |
| chr4.1 | exon | 1231967 | 1234117 | 1231967 | ID=MS.gene015612.t1.exon1;Parent=MS.gene015612.t1 |
| chr4.1 | CDS | 1231967 | 1234117 | 1231967 | ID=cds.MS.gene015612.t1;Parent=MS.gene015612.t1 |
| chr4.1 | exon | 1234240 | 1234509 | 1234240 | ID=MS.gene015612.t1.exon2;Parent=MS.gene015612.t1 |
| chr4.1 | CDS | 1234240 | 1234509 | 1234240 | ID=cds.MS.gene015612.t1;Parent=MS.gene015612.t1 |
| Gene Sequence |
| Protein sequence |
