AlfalfaGEDB | MS.gene06729

M. sativa cultivar XinJiangDaYe / MS.gene06729

KEGG: K12827
GO: GO:0003674 GO:0003676 GO:0005488 GO:0005575 GO:0005634 GO:0008270 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0046872 GO:0046914 GO:0097159 GO:0110165 GO:1901363
PFAM: PF11931.11 PF12108.11 PF13297.9 PF16837.8

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene06729.t1	XP_003602225.1	96.5	508	18	0	1	508	1	508	4.40E-274	953.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene06729.t1	Q9FG01	71.9	509	137	2	1	508	1	504	4.3e-214	745.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene06729.t1	G7J6U4	96.5	508	18	0	1	508	1	508	3.1e-274	953.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049166	MS.gene06729	0.820541	6.49E-53	-1.69E-46
MS.gene049411	MS.gene06729	0.810784	9.70E-51	-1.69E-46
MS.gene049887	MS.gene06729	0.818089	2.35E-52	-1.69E-46
MS.gene050084	MS.gene06729	0.802025	6.82E-49	-1.69E-46
MS.gene050085	MS.gene06729	0.834216	3.41E-56	-1.69E-46
MS.gene050114	MS.gene06729	0.813314	2.72E-51	-1.69E-46
MS.gene050277	MS.gene06729	0.807188	5.71E-50	-1.69E-46
MS.gene050317	MS.gene06729	0.819571	1.08E-52	-1.69E-46
MS.gene050386	MS.gene06729	0.808678	2.75E-50	-1.69E-46
MS.gene050551	MS.gene06729	0.805501	1.30E-49	-1.69E-46
MS.gene050646	MS.gene06729	0.802342	5.87E-49	-1.69E-46
MS.gene050654	MS.gene06729	0.805851	1.09E-49	-1.69E-46
MS.gene050689	MS.gene06729	0.843145	1.68E-58	-1.69E-46
MS.gene050752	MS.gene06729	0.818415	1.98E-52	-1.69E-46
MS.gene050838	MS.gene06729	0.869425	3.13E-66	-1.69E-46
MS.gene051003	MS.gene06729	0.869726	2.50E-66	-1.69E-46
MS.gene051234	MS.gene06729	0.825124	5.56E-54	-1.69E-46
MS.gene051245	MS.gene06729	0.800042	1.74E-48	-1.69E-46
MS.gene051343	MS.gene06729	0.807688	4.47E-50	-1.69E-46
MS.gene05134	MS.gene06729	0.803701	3.07E-49	-1.69E-46
MS.gene051365	MS.gene06729	0.804648	1.95E-49	-1.69E-46
MS.gene051381	MS.gene06729	0.816687	4.86E-52	-1.69E-46
MS.gene051746	MS.gene06729	0.811267	7.63E-51	-1.69E-46
MS.gene051748	MS.gene06729	0.8237	1.20E-53	-1.69E-46
MS.gene051850	MS.gene06729	0.814561	1.45E-51	-1.69E-46
MS.gene051902	MS.gene06729	0.807112	5.93E-50	-1.69E-46
MS.gene051903	MS.gene06729	0.829559	4.81E-55	-1.69E-46
MS.gene051975	MS.gene06729	0.822774	1.98E-53	-1.69E-46
MS.gene052072	MS.gene06729	0.841264	5.28E-58	-1.69E-46
MS.gene052307	MS.gene06729	0.830515	2.81E-55	-1.69E-46
MS.gene052342	MS.gene06729	0.82426	8.89E-54	-1.69E-46
MS.gene052397	MS.gene06729	0.81103	8.58E-51	-1.69E-46
MS.gene052434	MS.gene06729	0.831029	2.10E-55	-1.69E-46
MS.gene052609	MS.gene06729	0.803308	3.71E-49	-1.69E-46
MS.gene052947	MS.gene06729	0.820298	7.38E-53	-1.69E-46
MS.gene053058	MS.gene06729	0.833668	4.67E-56	-1.69E-46
MS.gene053079	MS.gene06729	0.806176	9.34E-50	-1.69E-46
MS.gene053109	MS.gene06729	0.820645	6.15E-53	-1.69E-46
MS.gene053381	MS.gene06729	0.811937	5.45E-51	-1.69E-46
MS.gene054250	MS.gene06729	0.82603	3.39E-54	-1.69E-46
MS.gene054403	MS.gene06729	0.816268	6.04E-52	-1.69E-46
MS.gene055424	MS.gene06729	0.854703	1.03E-61	-1.69E-46
MS.gene055513	MS.gene06729	0.807273	5.48E-50	-1.69E-46
MS.gene056097	MS.gene06729	0.807666	4.52E-50	-1.69E-46
MS.gene056181	MS.gene06729	0.845804	3.23E-59	-1.69E-46
MS.gene056432	MS.gene06729	0.823947	1.05E-53	-1.69E-46
MS.gene056580	MS.gene06729	0.802104	6.57E-49	-1.69E-46
MS.gene056787	MS.gene06729	0.826184	3.12E-54	-1.69E-46
MS.gene056986	MS.gene06729	0.827869	1.23E-54	-1.69E-46
MS.gene057057	MS.gene06729	0.831786	1.37E-55	-1.69E-46
MS.gene057094	MS.gene06729	0.833478	5.21E-56	-1.69E-46
MS.gene057102	MS.gene06729	0.824201	9.18E-54	-1.69E-46
MS.gene057140	MS.gene06729	0.818433	1.97E-52	-1.69E-46
MS.gene057234	MS.gene06729	0.844919	5.61E-59	-1.69E-46
MS.gene05781	MS.gene06729	0.856115	4.00E-62	-1.69E-46
MS.gene057999	MS.gene06729	0.817011	4.11E-52	-1.69E-46
MS.gene058054	MS.gene06729	0.837485	5.06E-57	-1.69E-46
MS.gene058055	MS.gene06729	0.831764	1.39E-55	-1.69E-46
MS.gene058074	MS.gene06729	0.824077	9.82E-54	-1.69E-46
MS.gene058238	MS.gene06729	0.819106	1.38E-52	-1.69E-46
MS.gene058261	MS.gene06729	0.809514	1.82E-50	-1.69E-46
MS.gene058646	MS.gene06729	0.804079	2.57E-49	-1.69E-46
MS.gene058654	MS.gene06729	0.808343	3.24E-50	-1.69E-46
MS.gene058906	MS.gene06729	0.806398	8.39E-50	-1.69E-46
MS.gene059146	MS.gene06729	0.856402	3.30E-62	-1.69E-46
MS.gene059171	MS.gene06729	0.809081	2.26E-50	-1.69E-46
MS.gene059227	MS.gene06729	0.815783	7.75E-52	-1.69E-46
MS.gene05978	MS.gene06729	0.821493	3.92E-53	-1.69E-46
MS.gene06011	MS.gene06729	0.842138	3.10E-58	-1.69E-46
MS.gene060763	MS.gene06729	0.857097	2.06E-62	-1.69E-46
MS.gene060935	MS.gene06729	0.806666	7.36E-50	-1.69E-46
MS.gene060937	MS.gene06729	0.810051	1.40E-50	-1.69E-46
MS.gene061006	MS.gene06729	0.803069	4.16E-49	-1.69E-46
MS.gene061100	MS.gene06729	0.819361	1.21E-52	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene06729	MS.gene053443	PPI
MS.gene06729	MS.gene030697	PPI
MS.gene06729	MS.gene48389	PPI
MS.gene62648	MS.gene06729	PPI
MS.gene06729	MS.gene66321	PPI
MS.gene06729	MS.gene055184	PPI
MS.gene06729	MS.gene29719	PPI
MS.gene06729	MS.gene035725	PPI
MS.gene06729	MS.gene60357	PPI
MS.gene06729	MS.gene94183	PPI
MS.gene06729	MS.gene55490	PPI
MS.gene06729	MS.gene040615	PPI
MS.gene068781	MS.gene06729	PPI
MS.gene06729	MS.gene58148	PPI
MS.gene89294	MS.gene06729	PPI
MS.gene06729	MS.gene70613	PPI
MS.gene06729	MS.gene032681	PPI
MS.gene06729	MS.gene012386	PPI
MS.gene06729	MS.gene015612	PPI
MS.gene06729	MS.gene79721	PPI
MS.gene06729	MS.gene56924	PPI
MS.gene06729	MS.gene065189	PPI
MS.gene06729	MS.gene072740	PPI
MS.gene06729	MS.gene018076	PPI
MS.gene06729	MS.gene99709	PPI
MS.gene063407	MS.gene06729	PPI
MS.gene06729	MS.gene073888	PPI
MS.gene06729	MS.gene25942	PPI
MS.gene06729	MS.gene96780	PPI
MS.gene06729	MS.gene59609	PPI
MS.gene06729	MS.gene56525	PPI
MS.gene06729	MS.gene069779	PPI
MS.gene51111	MS.gene06729	PPI
MS.gene06729	MS.gene92142	PPI
MS.gene06729	MS.gene039147	PPI
MS.gene06729	MS.gene50211	PPI
MS.gene06729	MS.gene055186	PPI
MS.gene06729	MS.gene064051	PPI
MS.gene26309	MS.gene06729	PPI
MS.gene06729	MS.gene89820	PPI
MS.gene06729	MS.gene022734	PPI
MS.gene06729	MS.gene070248	PPI
MS.gene06729	MS.gene83565	PPI
MS.gene06729	MS.gene98171	PPI
MS.gene06729	MS.gene067444	PPI
MS.gene24692	MS.gene06729	PPI
MS.gene06729	MS.gene031406	PPI
MS.gene053099	MS.gene06729	PPI
MS.gene06729	MS.gene074107	PPI
MS.gene06729	MS.gene007200	PPI
MS.gene06729	MS.gene033232	PPI
MS.gene06729	MS.gene050303	PPI
MS.gene06729	MS.gene04711	PPI
MS.gene059846	MS.gene06729	PPI
MS.gene06729	MS.gene022283	PPI
MS.gene06729	MS.gene89296	PPI
MS.gene95860	MS.gene06729	PPI
MS.gene06729	MS.gene85931	PPI
MS.gene06729	MS.gene86968	PPI
MS.gene06729	MS.gene22321	PPI
MS.gene06729	MS.gene98889	PPI
MS.gene06729	MS.gene67235	PPI
MS.gene06729	MS.gene009798	PPI
MS.gene06729	MS.gene030285	PPI
MS.gene06729	MS.gene040175	PPI
MS.gene06729	MS.gene031484	PPI
MS.gene06729	MS.gene28172	PPI
MS.gene06729	MS.gene75072	PPI
MS.gene06729	MS.gene024669	PPI
MS.gene06729	MS.gene21651	PPI
MS.gene06729	MS.gene074369	PPI
MS.gene06729	MS.gene062632	PPI
MS.gene06729	MS.gene53517	PPI
MS.gene06729	MS.gene66329	PPI
MS.gene06729	MS.gene020229	PPI
MS.gene06729	MS.gene56983	PPI
MS.gene06729	MS.gene67234	PPI
MS.gene068867	MS.gene06729	PPI
MS.gene06729	MS.gene46089	PPI
MS.gene06729	MS.gene89818	PPI
MS.gene06729	MS.gene39316	PPI
MS.gene06729	MS.gene70292	PPI
MS.gene009724	MS.gene06729	PPI
MS.gene06729	MS.gene47127	PPI
MS.gene06729	MS.gene82776	PPI
MS.gene006800	MS.gene06729	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene06729.t1	MTR_3g091250	96.457	508	18	0	1	508	1	508	0.0	1023
MS.gene06729.t1	MTR_3g091250	96.444	450	16	0	59	508	7	456	0.0	910

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene06729.t1	AT5G06160	73.674	509	128	2	1	508	1	504	0.0	743

Find 117 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTTACCTCCTTTAACCTTTC+AGG	0.130390	3.3:-76117829	None:intergenic
ATCACACAGTTTATTCATTT+TGG	0.141003	3.3:-76119539	None:intergenic
TTTAAAAGAAATTGCATTAA+TGG	0.158382	3.3:+76119513	MS.gene06729:CDS
CTTCGATTTCCTCGTATGTT+AGG	0.196582	3.3:-76119747	None:intergenic
CAACTGAGTTCGATGAAAAT+TGG	0.228110	3.3:+76117686	MS.gene06729:CDS
TCGTTGAAGTTCTTTGTATT+TGG	0.231113	3.3:-76121777	None:intergenic
TGTTGGAAGTTGGTTCATTC+TGG	0.242281	3.3:-76115154	None:intergenic
TATGCGGGAACTATAGTTAT+TGG	0.255362	3.3:+76121685	MS.gene06729:CDS
ATCTAGGCACTTGCTGCATT+GGG	0.294288	3.3:+76118661	MS.gene06729:intron
TCATACTCTTCCTCTAGATC+TGG	0.301279	3.3:-76122702	None:intergenic
CAGCACAGTTGAAGAGCTTA+TGG	0.302002	3.3:+76117798	MS.gene06729:CDS
CAGTATGTCAATTCTAAGTT+TGG	0.342388	3.3:+76116258	MS.gene06729:CDS
ATGCGGGAACTATAGTTATT+GGG	0.353408	3.3:+76121686	MS.gene06729:CDS
TGGGCTACTGGAAGGGTATT+GGG	0.359820	3.3:+76117706	MS.gene06729:CDS
TTGGGCTACTGGAAGGGTAT+TGG	0.366406	3.3:+76117705	MS.gene06729:CDS
CATCTAGGCACTTGCTGCAT+TGG	0.370534	3.3:+76118660	MS.gene06729:intron
CATTGATTCCAGTAGCAGTT+TGG	0.372960	3.3:-76115381	None:intergenic
ATGGGAAGCCTATACCTTAC+TGG	0.385559	3.3:+76121285	MS.gene06729:CDS
GCTGTATAAGCTACATGGTC+TGG	0.393993	3.3:+76121307	MS.gene06729:CDS
AGTGGGTCCTGAAAGGTTAA+AGG	0.394686	3.3:+76117822	MS.gene06729:CDS
GGTGTACCTGAATAGTCTTT+TGG	0.402619	3.3:+76116473	MS.gene06729:CDS
CAGCCCCTGGCGTTGTAAAT+CGG	0.404084	3.3:-76122763	None:intergenic
TGCAGGAAGCAAAAGAGCTT+TGG	0.404374	3.3:+76122640	MS.gene06729:intron
GATACTCCAAAAGACTATTC+AGG	0.407884	3.3:-76116479	None:intergenic
TTCAATTCTACAGGCAGTAC+AGG	0.408760	3.3:+76116451	MS.gene06729:intron
TGTATCAGAGTCACCGTGTT+CGG	0.411672	3.3:+76115186	MS.gene06729:CDS
CTCTTTGAGTCTATCATAGA+AGG	0.414347	3.3:-76115413	None:intergenic
CTGATACAAACGGTCCTTGT+TGG	0.416952	3.3:-76115171	None:intergenic
TTCGATTTCCTCGTATGTTA+GGG	0.417088	3.3:-76119746	None:intergenic
AACTGAGTTCGATGAAAATT+GGG	0.421192	3.3:+76117687	MS.gene06729:CDS
TTCGATGAAAATTGGGCTAC+TGG	0.424132	3.3:+76117694	MS.gene06729:CDS
TTATACAGCCAGTAAGGTAT+AGG	0.426162	3.3:-76121293	None:intergenic
CTTGGTGGCCAAACTGCTAC+TGG	0.431424	3.3:+76115373	MS.gene06729:CDS
GCGTCAACAACACGTGCAGC+TGG	0.446491	3.3:-76115699	None:intergenic
TGTAGATACGAGAGTATCAT+AGG	0.463065	3.3:+76115670	MS.gene06729:intron
TCAATTGCAGTGTGCTGAGC+AGG	0.463086	3.3:-76117763	None:intergenic
AGATTCTATCAAGATCTTGC+AGG	0.470792	3.3:-76116530	None:intergenic
TACTGGAAGGGTATTGGGAT+GGG	0.483346	3.3:+76117711	MS.gene06729:CDS
CAACGAAATTACGTCAATTG+AGG	0.486863	3.3:+76121794	MS.gene06729:CDS
CTGTATAAGCTACATGGTCT+GGG	0.495612	3.3:+76121308	MS.gene06729:CDS
GCACACACCTCTTGAAATGC+TGG	0.495845	3.3:+76119417	MS.gene06729:intron
ATGAAAATTGGGCTACTGGA+AGG	0.496968	3.3:+76117698	MS.gene06729:CDS
TAATCCCTTAAAATTACCAA+TGG	0.498141	3.3:+76121256	MS.gene06729:CDS
GCTGCATTGGGACTGAAGAC+TGG	0.498905	3.3:+76118673	MS.gene06729:CDS
AATTTAAGTGCGAGATATGC+GGG	0.502127	3.3:+76121670	MS.gene06729:CDS
TAAGCTACATGGTCTGGGTC+AGG	0.506287	3.3:+76121313	MS.gene06729:CDS
GATTCTATCAAGATCTTGCA+GGG	0.507050	3.3:-76116529	None:intergenic
GGGATGGGAGAATGTCAATC+AGG	0.507812	3.3:+76117726	MS.gene06729:CDS
CATACTCTTCCTCTAGATCT+GGG	0.507949	3.3:-76122701	None:intergenic
AATCCCTTAAAATTACCAAT+GGG	0.508135	3.3:+76121257	MS.gene06729:CDS
TCGAGCAGCACACGAGGAAG+TGG	0.508472	3.3:+76115100	MS.gene06729:CDS
AGTTGAAGAGCTTATGGAAG+TGG	0.508524	3.3:+76117804	MS.gene06729:CDS
CTTAAAATTACCAATGGGAT+GGG	0.511486	3.3:+76121262	MS.gene06729:CDS
CAACATGGGATGCGATGCCT+TGG	0.512114	3.3:+76121750	MS.gene06729:CDS
AGGTATGCAGAATACTCAAT+TGG	0.515419	3.3:-76116285	None:intergenic
AAATTACCAATGGGATGGGA+TGG	0.518712	3.3:+76121266	MS.gene06729:CDS
ACTACTATCACTTCCACCAC+TGG	0.521216	3.3:+76115218	MS.gene06729:CDS
AAACGGTCCTTGTTGGAAGT+TGG	0.522332	3.3:-76115164	None:intergenic
CCTTAAAATTACCAATGGGA+TGG	0.523259	3.3:+76121261	MS.gene06729:CDS
TGTAGCTTATACAGCCAGTA+AGG	0.523342	3.3:-76121299	None:intergenic
GAGAATGTCAATCAGGAGAA+TGG	0.526978	3.3:+76117733	MS.gene06729:CDS
ATATACCGATTTACAACGCC+AGG	0.529015	3.3:+76122758	MS.gene06729:CDS
ACACGAGGAAGTGGAGCGAT+TGG	0.537478	3.3:+76115109	MS.gene06729:CDS
TGATAAAGATAATGCAAGGA+AGG	0.542251	3.3:+76115336	MS.gene06729:CDS
AGGAAGTGGAGCGATTGGAG+AGG	0.543007	3.3:+76115114	MS.gene06729:CDS
CTTGCAGGGGTTCTGTCCGA+TGG	0.546665	3.3:-76116515	None:intergenic
GATGAGATTGCTGCACTTGG+TGG	0.547147	3.3:+76115358	MS.gene06729:CDS
GAAGAGTATGAAGACAAAGA+AGG	0.547972	3.3:+76122714	MS.gene06729:CDS
TCTCCGCTAAACTCAATTCG+AGG	0.550547	3.3:-76115756	None:intergenic
GGAAGTGGAGCGATTGGAGA+GGG	0.550888	3.3:+76115115	MS.gene06729:CDS
AAAGAATGGCGTCATCAACA+TGG	0.552884	3.3:+76121735	MS.gene06729:CDS
AAAAGAAATTGCATTAATGG+AGG	0.560517	3.3:+76119516	MS.gene06729:CDS
CTTCTATGATAGACTCAAAG+AGG	0.564031	3.3:+76115414	MS.gene06729:CDS
TGAAAATTGGGCTACTGGAA+GGG	0.568639	3.3:+76117699	MS.gene06729:CDS
TGCGGGAACTATAGTTATTG+GGG	0.570663	3.3:+76121687	MS.gene06729:CDS
GGCTTCCCATCCCATCCCAT+TGG	0.570952	3.3:-76121272	None:intergenic
CACGGTGACTCTGATACAAA+CGG	0.571196	3.3:-76115181	None:intergenic
AATTACCAATGGGATGGGAT+GGG	0.575961	3.3:+76121267	MS.gene06729:CDS
ACTTAGAATTGACATACTGC+TGG	0.576248	3.3:-76116254	None:intergenic
AAGGATGAGATTGCTGCACT+TGG	0.576506	3.3:+76115355	MS.gene06729:CDS
TTATGGAAGTGGGTCCTGAA+AGG	0.577854	3.3:+76117815	MS.gene06729:CDS
GAATTTAAGTGCGAGATATG+CGG	0.584834	3.3:+76121669	MS.gene06729:CDS
CAAGTGGCGCCCAGATCTAG+AGG	0.587275	3.3:+76122692	MS.gene06729:CDS
CGTCAACAACACGTGCAGCT+GGG	0.591543	3.3:-76115698	None:intergenic
GAACCTCGAATTGAGTTTAG+CGG	0.593969	3.3:+76115753	MS.gene06729:CDS
CGCGCAAAATGAAAACAACC+AGG	0.595239	3.3:+76116337	MS.gene06729:CDS
CTACTGGAAGGGTATTGGGA+TGG	0.595365	3.3:+76117710	MS.gene06729:CDS
TCTTACAAGTCGTCCAGTGG+TGG	0.600104	3.3:-76115231	None:intergenic
TACTGGCTGTATAAGCTACA+TGG	0.603636	3.3:+76121302	MS.gene06729:CDS
TTCTTGTCCAGCATTTCAAG+AGG	0.604903	3.3:-76119424	None:intergenic
AGCAACTCGAGCAGCACACG+AGG	0.609582	3.3:+76115094	MS.gene06729:CDS
TCTTTGTATTTGGTATACCA+AGG	0.611780	3.3:-76121767	None:intergenic
AGAGACAAGGAGTGAACAAG+TGG	0.612327	3.3:+76122676	MS.gene06729:CDS
ATGATGATAAAGATAATGCA+AGG	0.615572	3.3:+76115332	MS.gene06729:CDS
TCAATTCTACAGGCAGTACA+GGG	0.619788	3.3:+76116452	MS.gene06729:intron
ATTGGAGAGGGTAATAGTGA+AGG	0.622961	3.3:+76115127	MS.gene06729:CDS
AAGAATGGCGTCATCAACAT+GGG	0.625608	3.3:+76121736	MS.gene06729:CDS
AATCGAAGCAGAACGTGAGG+AGG	0.626396	3.3:+76119762	MS.gene06729:CDS
GTTGAAGAGCTTATGGAAGT+GGG	0.627195	3.3:+76117805	MS.gene06729:CDS
AAGAAGATACAGCAGAGACA+AGG	0.630262	3.3:+76122663	MS.gene06729:CDS
GTAGCTGCTGCTCCACAACA+TGG	0.632223	3.3:+76119487	MS.gene06729:CDS
GGAAATCGAAGCAGAACGTG+AGG	0.636554	3.3:+76119759	MS.gene06729:CDS
GAATGAACCAACTTCCAACA+AGG	0.648324	3.3:+76115157	MS.gene06729:CDS
GAATCTTACAAGTCGTCCAG+TGG	0.655081	3.3:-76115234	None:intergenic
ACTGTGTGATTTGTTAGACG+AGG	0.661277	3.3:+76119552	MS.gene06729:CDS
TCGAATTGAGTTTAGCGGAG+AGG	0.670960	3.3:+76115758	MS.gene06729:CDS
GCATTGGGACTGAAGACTGG+TGG	0.671657	3.3:+76118676	MS.gene06729:CDS
AGAGAGGCTCTTCCTCACAA+AGG	0.683965	3.3:+76118717	MS.gene06729:CDS
CTGTTCAGCAACGTGCAGAG+AGG	0.688046	3.3:+76118701	MS.gene06729:CDS
TAGTAATCATATTCCGAACA+CGG	0.688533	3.3:-76115199	None:intergenic
ATTCTATCAAGATCTTGCAG+GGG	0.691153	3.3:-76116528	None:intergenic
GGGTCCTGAAAGGTTAAAGG+AGG	0.691274	3.3:+76117825	MS.gene06729:CDS
ATTGCAGGAAGAGACTCAAG+AGG	0.696019	3.3:+76121199	MS.gene06729:intron
TATACCGATTTACAACGCCA+GGG	0.704758	3.3:+76122759	MS.gene06729:CDS
GCGGGAACTATAGTTATTGG+GGG	0.717346	3.3:+76121688	MS.gene06729:CDS
GAAGCAAGCCCTAACATACG+AGG	0.718372	3.3:+76119738	MS.gene06729:CDS
ATACCGATTTACAACGCCAG+GGG	0.730189	3.3:+76122760	MS.gene06729:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
chr3.3	gene	76115074	76122791	76115074	ID=MS.gene06729
chr3.3	mRNA	76115074	76122791	76115074	ID=MS.gene06729.t1;Parent=MS.gene06729
chr3.3	exon	76115074	76115247	76115074	ID=MS.gene06729.t1.exon1;Parent=MS.gene06729.t1
chr3.3	CDS	76115074	76115247	76115074	ID=cds.MS.gene06729.t1;Parent=MS.gene06729.t1
chr3.3	exon	76115322	76115435	76115322	ID=MS.gene06729.t1.exon2;Parent=MS.gene06729.t1
chr3.3	CDS	76115322	76115435	76115322	ID=cds.MS.gene06729.t1;Parent=MS.gene06729.t1
chr3.3	exon	76115675	76115779	76115675	ID=MS.gene06729.t1.exon3;Parent=MS.gene06729.t1
chr3.3	CDS	76115675	76115779	76115675	ID=cds.MS.gene06729.t1;Parent=MS.gene06729.t1
chr3.3	exon	76116216	76116358	76116216	ID=MS.gene06729.t1.exon4;Parent=MS.gene06729.t1
chr3.3	CDS	76116216	76116358	76116216	ID=cds.MS.gene06729.t1;Parent=MS.gene06729.t1
chr3.3	exon	76116464	76116560	76116464	ID=MS.gene06729.t1.exon5;Parent=MS.gene06729.t1
chr3.3	CDS	76116464	76116560	76116464	ID=cds.MS.gene06729.t1;Parent=MS.gene06729.t1
chr3.3	exon	76117682	76117846	76117682	ID=MS.gene06729.t1.exon6;Parent=MS.gene06729.t1
chr3.3	CDS	76117682	76117846	76117682	ID=cds.MS.gene06729.t1;Parent=MS.gene06729.t1
chr3.3	exon	76118667	76118738	76118667	ID=MS.gene06729.t1.exon7;Parent=MS.gene06729.t1
chr3.3	CDS	76118667	76118738	76118667	ID=cds.MS.gene06729.t1;Parent=MS.gene06729.t1
chr3.3	exon	76119418	76119573	76119418	ID=MS.gene06729.t1.exon8;Parent=MS.gene06729.t1
chr3.3	CDS	76119418	76119573	76119418	ID=cds.MS.gene06729.t1;Parent=MS.gene06729.t1
chr3.3	exon	76119706	76119783	76119706	ID=MS.gene06729.t1.exon9;Parent=MS.gene06729.t1
chr3.3	CDS	76119706	76119783	76119706	ID=cds.MS.gene06729.t1;Parent=MS.gene06729.t1
chr3.3	exon	76121206	76121334	76121206	ID=MS.gene06729.t1.exon10;Parent=MS.gene06729.t1
chr3.3	CDS	76121206	76121334	76121206	ID=cds.MS.gene06729.t1;Parent=MS.gene06729.t1
chr3.3	exon	76121669	76121815	76121669	ID=MS.gene06729.t1.exon11;Parent=MS.gene06729.t1
chr3.3	CDS	76121669	76121815	76121669	ID=cds.MS.gene06729.t1;Parent=MS.gene06729.t1
chr3.3	exon	76122645	76122791	76122645	ID=MS.gene06729.t1.exon12;Parent=MS.gene06729.t1
chr3.3	CDS	76122645	76122791	76122645	ID=cds.MS.gene06729.t1;Parent=MS.gene06729.t1

Gene Sequence

>MS.gene06729

ATGTCTTCAACGTTGCTAGAAGCAACTCGAGCAGCACACGAGGAAGTGGAGCGATTGGAGAGGGTAATAGTGAAGGATCTCCAGAATGAACCAACTTCCAACAAGGACCGTTTGTATCAGAGTCACCGTGTTCGGAATATGATTACTACTATCACTTCCACCACTGGACGACTTGTAAGATTCCATCTTTATTATATTAGGGTTTATCGTTTTCTATCGTAATTCGTAACACGTTTCTTTGTTTTCAGATTGAGATATATGATGATAAAGATAATGCAAGGAAGGATGAGATTGCTGCACTTGGTGGCCAAACTGCTACTGGAATCAATGTTTTTAGTGCCTTCTATGATAGACTCAAAGAGGTTAGTTAGCTTTTACTCTTTTTCAATTTCAATTTTCATTCTCCTTATTATTATTATTATTATTATTTTAGGTTTAAGAGGTTAAATTTCAAAATTGTTGCGGTTTTTAAGTGGAAAACAACTTTAATATTGGACTTTAGGTTATATAATTGGATTTGGTGGAAATGAGTTCTTGCATTTATATGTTTGAATCAATTGCGTGTCGGTAACAGATTTTGGTTATTTTGTGGTATGTGTAGATACGAGAGTATCATAGGAAACACCCAGCTGCACGTGTTGTTGACGCAAATGACGATTTTGAAGATCTTCTTAAAGAGGAACCTCGAATTGAGTTTAGCGGAGAGGTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTTTGTGTGTGTGTGTGTGTGTGAATATGAGAAACTGTTGATTGCTCTGGCTGAAATTAGACTTTGCCCTAGGCCCTAGCATGTGTGATGCATGGTTAAATATTGAATTTGGGAATTCTTCATATTTTAAGAATTGCAGTGACAAGTCATTACGGTATTTGGATTCATCTCAAATCTTGCTCGTGCGCATTCGGAATGCAATGAAGAATTTCTTGTCTAAGGGGCCTATTTGTTCCAGAGAAAACATTTACATTGAATATGCATGAAGTCTAAAATATTATACTATTAAGAGAGACAATATCACGTTTACAATACAATTTATGCTACTGCAGTTTTTTCGTGGTCACTGATTATGTGATAACTGTTTTCCAGGAAGCTTTTGGTCGATACTTAGACATGCATGCGTTATACCAGCAGTATGTCAATTCTAAGTTTGGAGAGCCAATTGAGTATTCTGCATACCTTGATATTTTTTCTGAGACAGATAAGATCCCGCGCAAAATGAAAACAACCAGGTGAGTTGCATTCTCTATCTATCTAATATGTTGATCATTTGTCGGCATCCTAGTTTTGTATGGAATATGTACACTATTCTTCTTAATCCTTGTTCAATTCTACAGGCAGTACAGGGTGTACCTGAATAGTCTTTTGGAGTATCTAATATCTTTTTTCCATCGGACAGAACCCCTGCAAGATCTTGATAGAATCTTTTCAAAGGTGATTGATTTTACATTGTTTTGAACTTGTATCTTTTTTAGCATAATTTTAAGTCTCAATTTTCTCTTAGAATGGGATGTTTTGAAAATTTCCCTCCTAGCTCTGAATTTTTTGGTGCAGAAACTTCATGAATCTTTGTTTTAAACAACTTGCATTAGTTTTTTTTTTCTTTCTGAAAGTTGTCTCACTGAAATCCAGTGTTATGTTTGGGCAAACAACTTGCTTATAATTTTTGTCAATGCAGTCAACCATTTTTCTATATTTTTATGTGTTTATAACAAGTTTAACCCATTTTTTATTCCAGTATGATTCCATTTTCATGACACTATATACTGAAGCAAAACAATTATGAACTAAAGGTAAAGAGAAAAAAAGGATACACACCATCAATGTAAACTAGTTTTACACTAACACCCAATAAGAATAGAGTGTGTGGTAGTTATTTTTAAAAGACACTTACCAAACGGGCATACATGACATGATGGGTTCCCATTGGAAGACAATATAAAACTATTTTACACAATCGGTGCATAGCCATTAAACTCAATTAAAACTCCACAGGTGTTTGCGGTCCACATAAATATTGAAAGACTGTGGACGGACCTCCCATCAAAATCTTTCATTTCTCCACAGCTTTGAATGTTATGTGTAACTAATTTTGAGCACTTTATTATTGATTTTAAGACTCTAGAAGATTAAATGCAGTTTTAGATAACCACTTATCAGTTTTGGAACTTCACCCAAAATCTTTAGTTCATCTAGGTACTAATGTCCTATAGTTTTGACAGTAGGGGTCCGGAAAGATATGTTAATGATTTCTGGAATAAAAAAAGTAAAGGAAAAAGTGTCCCTGGAAAGCTTCTTTATTTTAAAGTGGACCGAAGTTAAATGCATATTTCTCTTTTATGGGAGGGAGTGTAGCTTTGTAAATTTTCAACTTTTTTAAAATAAAAATGGAGGGTGCTTTATCATATGCCTTCTCTTGCAGGAGAGAAGGGAACTGTAATTTTCTCCTATTTTAAAGCTTTCTGTGTCAGAAGTGATTGCATTGTTTACCTACTCGTTTTCTTGTGAATTAGTTGCACTTCTCTATTTTCTGGGATCTGATAATGTTGTGGCAGGTAACAACTGAGTTCGATGAAAATTGGGCTACTGGAAGGGTATTGGGATGGGAGAATGTCAATCAGGAGAATGGACATGTACCTGCTCAGCACACTGCAATTGATCTTGATTATTACAGCACAGTTGAAGAGCTTATGGAAGTGGGTCCTGAAAGGTTAAAGGAGGTAAAAAACTAAAAATTGAGGATTGTGTGTGTGAGGATTGAGTATTATAAAATTGAAGATATACACTTACTGGTTTTGTACTTGTACTTAGTTTGCGTGTGTATGTAACAAATACAATTCAAAATATTCGAAAACAATTGGAGTACTCAATTTGGATACATGGGTACGGATTTGGTAAAATAAGGGTGAGAGCAAAATATGGGATATTGGTTGAGATAAATGGGATATCTGAAGTTGTCACTGATGATATTTAAGAAAACGATGTGATTGGTACTGTTTAAGAAAATGATCTGAAGTTGTCACAGATGATATTTAAGAAAATGATGTGATTGGTACTGTTTACTTGTGATATTCATAGCCATGTTTAAGTTTTATATGATGTTGATTGTTGAATAACTTTCATATTGTAGTTTCATTAGGAGGTCTTTTGCTGTCATGTTGAACTGAGTTAAGCTCTTTTTATTATTTTTTTATACATAATGCTTGATTGTGTTTTTCATAATCTTTTATGCAATTTAGATGTTTATATAGAATTTAATTTCCTTATATATGTATATTTTTTAAAATTTATATTAATGCACCCATATTTTAGACTTTTAAGAACTCTATCACTACCATACCCTTATCCATGCAACATTGGTATAGTACAATACAATACAATACAAGGATTTACCCTCCCTTTTTATAAACTTGAAATTCTTTCAATATTCATGAAGTACAAACATTAAGTATCTTTTCTTGCTAGTCATTAATTTTTTTGGAGCTCTATTTATTGATAACTGATTTATTCTTCCGCCTTTTGTCTTGATTTTTCATCTAGGCACTTGCTGCATTGGGACTGAAGACTGGTGGCACTGTTCAGCAACGTGCAGAGAGGCTCTTCCTCACAAAGGTGATTTTTACCCGTTTACCAGGGACATGGTTACACTTTTTTTTTTGCGGTTTTCTTGGTCTTTTCTGTGGACGGAGTAGGAATGTAGGGATTATCTTTGCTGCAGTACCTCAAAACAAGTTCCATAAGAGATGTATTCTCGCCTTTTCCTTCAAAGCTGATTGTCGTAAGCTTAGTCACGAACTGGGATCTCCAGATAGGCTCAAACCGAGAGTTCAAAACCAATTGAAGATGATTTAACTGACTTAAGCCCCCCCCCCCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAAAAAAAAAAGCATAGTTACAATCCCTTGAAAGCCAGGTATTAGATAGATCATTGGGCCTTGAAATATTCTAAAATTTTATATGCTTTCTTGGTTCCTGATCATAAGTACCTACAATTATGAATTTGTTCAGGATATCATTATCTTGTAGGTTTTCAATGCTATGAAAACATTAACTCCTTCAATATTTATGAAGTGATATTTCCACCATATGTTGTAGATCAAAATCAGTTAAACCCTTCACGCCCAATTTTCTATTTGCCTGGAAGATGCCCTGGTTGCCTGAATTTTGATTGAAGTTACTTTTTTTCCTCTAAGCTATGAATGCATAATCTGTCTTTACAGCTCGAGTTAACAAATTTTCTCTCACATTTTTTTTTTTCATGCAGCACACACCTCTTGAAATGCTGGACAAGAAGCATTTTGCCAAGGGGGCGCGTGGTTTAGAAAAAAATGGGGTAGCTGCTGCTCCACAACATGGAAATTTAAAAGAAATTGCATTAATGGAGGCCAAAATGAATAAACTGTGTGATTTGTTAGACGAGGTTAGCAAACGATGCTTCATTATTTCTTTAAGTTTACTTCCTTTGATGATTTGAAATGCAACATTTTGGGCATATAAATTACTTTATCTATAGAAAATTCTTTGGTGTATAATGTTTATCATCTTTCTACAGACAATTACTCGAACAAAAGACAACGTTGTAAAGAAGCAAGCCCTAACATACGAGGAAATCGAAGCAGAACGTGAGGAGGTGAGTTGAAGCAATTTATGAATCCTCTAAATTTTAGGGGACCCATACCATAGTGCATTACTGTGACATTAGTTTTTCACAGCACTGATTCATTTTTTTTGTCAAAGAAATACACTTACCAATTATATTTTATATCTTAGACGGTTGACCATAATACATTAAATGCACTTTACTTGTTTGCTTTTAACATCTGGGGGTTGGCTTTAATGAGGGACTAAGGTGCATGTGCAACGATTGATACTGTCATATGACGTATGCATTGTTTCTAGGTTCAAAACGATCTCCAAGACGCTTTGGTGCACTTCATTGCATCAATCATATTCATAGTTTATCATGGGTGTCCTGTACTTATATTTGAAGGGGATGTAGAACTGGTCTTGTATATATGGCCAACATTATTGAAGTTGATAAATCCTTATTGTAACCAAAATTGTGAGTGTAAATTCATCTATAAAATAGGCTAATGCTTAAGCTATCTATGATGAGGTTGACCTTTTTCATTAACTTATTCTCATATTATTCATGATATGAGTTGCTTTAAATTATCATTGAAGCACACATGATGTTTTGAATTGTATGTGTGCCGTGGGACTTGGCTTATGTGGTGGATGGGGAATATTCGTCCGGAAATGAAATTTGTTCTGAATGCTACCAATGAGACTTGATTACATGCTTTAGATAAAAGGTGTGCAGTTTTGGCTTGAGTATAACTGTGGATCTTTTACTTCTAGTTCTATGTTTCTGGATAGCGTATTCTGTTAAAGATTGCATTATCTGATTTCTAGGCTTTGATAAGGAGGGGTAAACATAAGTACGACTTGACCCAACAACAATACCAACAACAACCAAGCCTTACCCTCTAAGTGGGGTTGGCGATCTAATTACGCCATAATGTTCTATCATAAACCAGATTTTGGTTCAACTCATTAATCTCCAAAGTCTTTCCTAATAGTTTCTCTTAAAGTTTTTCTAGGTCTTCCTCTGCCTCTAGTGATCCGACTGTCCTCCACCTGAACGACTTGACCCTGCCACAATTATTTTAGGAGAAAAAGTATTATTCACTGGAGAAGTTATTCTATGGCATTCACTAAAACCACCACCTTGAAAATATGGGTTTGAGAGGAGACAACTGTGGCATCAAATGTTAAGATGCACAAGAATTCAATCCTAGTTGATCGTTCCAAGTCACTATTCACTTTTTTTTTGCCTGTTTTCTTTGAAAAGTTTTCAGACAAATTGAAGCTTTTTTATTGCCATTGTTGTTTCGTGGTCTATATTAACAAGAGAGAAAAATAGTTTCTAGCTTTCATCTGTCCTCCTGATTCGCATAACTCTTCATCTGTTTTTGCCAATTTACTTCTGCTCCTTTCTCTCTCAATTATTGCTTTATTTATAGTACATAATATTAAACATTCATTGCAGGAAGAGACTCAAGAGGACTCTGAAAGCGAAGATGACGAGCAGCAGATTTATAATCCCTTAAAATTACCAATGGGATGGGATGGGAAGCCTATACCTTACTGGCTGTATAAGCTACATGGTCTGGGTCAGGTATTATTTATTTGCAATTAAAATTTTAGAAATTTGAACTGTTGTTTCTTTTGCTGGATATATCTCAAGGGTTGGTTTTATCATTGTCTATTCACGAGTCTTGACAGTCCCAAAGTGGTGACTTACAAAATTTATCTCTTTACTAGAGGAGCAGATAAAAGCAAAAGGAAAAAAGCTATTAAAAGAAATTGTTGTTATTGTCCGCCTTTGCTTGTTGGCAGTATTGCATTAGATAGTTTCATTGACTTAATTAGAAAGTTAGGGGCTTGTTTATTTTATGATTCCTTATGGCTCTCATTATTTTGATCACTAAATAATATAATATGCATTTCAGGAATTTAAGTGCGAGATATGCGGGAACTATAGTTATTGGGGGCGTCGTGCTTTTGAACGACATTTTAAAGAATGGCGTCATCAACATGGGATGCGATGCCTTGGTATACCAAATACAAAGAACTTCAACGAAATTACGTCAATTGAGGTACAGATTTTTATCAGTTTTATAGCATGCATGTCATGATTACCAACTGAAATAATTTGACATCACCGTTAATCAAATATAGCATCCATTGGGGTATAACTTTATCACCTAGCATTAAAACTTTCTTGTATATACTGTATTTTGTGCTACATTTCACTAATTTAATTATGAAGTATATTTGACTGCATGGTCTTGGTCTATCAGTGATGTGTGTGCGGTATCTGTAATAGTATTTATTTCCTCTTCCCTGCTAAGAAAAAACTAGTTATCTACTTGTAATCACGGTTGCTATCAATACGCAGTTTGTTATTGTCCCTATCATATACTTTACTATGGCCGCAAGTGCGCGTTTAGTTTGTGTCTCACAAGTGCACGTTTAGTTTGTGTCTTACTGAAATCACATTTCAATAAGATTCTGCGCTTGCAAAGTGCTTATGGAAATTTTGAAACTCAATTTGCAGTTGTTAACTCTGAATATCTTTTCTGTTGGTCATATTTTGCAAAATATTTTGTGGGGGTGGGGTACTTCATTGTAGACTATCAAATATGTCGTACGACTGTTAATGGTAAATACTCCTATTCTCTTTCTACTAATTTATTCCTGAGGATTTCATATCTTGGTCACAACAACCCTAGTGACAATATCTATTCGCTGGTACTATTCAGATAATATGATCAGTTTTAAAAATGAAATTAGCGAGATCACCTCATGAAATTAGAATAAAAAACTTGAAAATACCAGTGCTGTTTCTCTCCAGTCCTTTACAAATAGTTTTGGACAAAAAAACTATTTTTATGGTACCTTAAATGCTACTATTCTCTGTTGCAGGAAGCAAAAGAGCTTTGGAAGAAGATACAGCAGAGACAAGGAGTGAACAAGTGGCGCCCAGATCTAGAGGAAGAGTATGAAGACAAAGAAGGCAACATCTATAATAAGAAGACATATACCGATTTACAACGCCAGGGGCTGATATGA

Protein sequence

>MS.gene06729.t1

MSSTLLEATRAAHEEVERLERVIVKDLQNEPTSNKDRLYQSHRVRNMITTITSTTGRLIEIYDDKDNARKDEIAALGGQTATGINVFSAFYDRLKEIREYHRKHPAARVVDANDDFEDLLKEEPRIEFSGEEAFGRYLDMHALYQQYVNSKFGEPIEYSAYLDIFSETDKIPRKMKTTRQYRVYLNSLLEYLISFFHRTEPLQDLDRIFSKVTTEFDENWATGRVLGWENVNQENGHVPAQHTAIDLDYYSTVEELMEVGPERLKEALAALGLKTGGTVQQRAERLFLTKHTPLEMLDKKHFAKGARGLEKNGVAAAPQHGNLKEIALMEAKMNKLCDLLDETITRTKDNVVKKQALTYEEIEAEREEEETQEDSESEDDEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQQRQGVNKWRPDLEEEYEDKEGNIYNKKTYTDLQRQGLI