AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene003478

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003478.t1 MTR_4g074440 93.685 966 50 5 1 962 1 959 0.0 1702
MS.gene003478.t1 MTR_4g074440 91.215 683 49 5 1 679 1 676 0.0 1158
MS.gene003478.t1 MTR_1g017520 25.032 779 442 25 178 896 106 802 2.92e-39 158
MS.gene003478.t1 MTR_1g106025 25.336 521 313 15 274 749 164 653 2.78e-30 129
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003478.t1 AT3G19840 54.632 842 307 18 108 941 60 834 0.0 754
MS.gene003478.t1 AT1G44910 28.802 434 250 14 340 746 190 591 5.67e-37 150
MS.gene003478.t1 AT1G44910 28.802 434 250 14 340 746 190 591 8.18e-37 150
MS.gene003478.t1 AT3G19670 27.594 453 270 15 337 749 206 640 5.88e-26 115
MS.gene003478.t1 AT3G19670 27.594 453 270 15 337 749 206 640 5.88e-26 115
MS.gene003478.t1 AT3G19670 27.594 453 270 15 337 749 206 640 5.88e-26 115
MS.gene003478.t1 AT3G19670 27.594 453 270 15 337 749 187 621 9.57e-26 115

Find 268 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATAAACCTGCTGGCTTTAA+AGG 0.103135 4.2:-34371799 MS.gene003478:CDS
ACTATCGCCCAACTACTTTA+TGG 0.163328 4.2:-34372550 MS.gene003478:CDS
TCTTCAGTGGCTTTCTTTAA+AGG 0.171523 4.2:+34363421 None:intergenic
TCAGACAATACAGTAGTATT+TGG 0.190956 4.2:+34368520 None:intergenic
GGAGGGTTGACAGCCGAATT+AGG 0.218520 4.2:+34374254 None:intergenic
CAACAAAATGTTAACGCTTC+TGG 0.226037 4.2:-34374400 MS.gene003478:CDS
GGGAGCGAGAGCTGCGTAAA+AGG 0.255583 4.2:-34361155 MS.gene003478:CDS
CTTGGAACCTTGTTATATCT+TGG 0.278928 4.2:+34359954 None:intergenic
GAAGAAGAAGATGATGGATT+AGG 0.296211 4.2:+34374552 None:intergenic
AAAGTAGTTGGGCGATAGTT+AGG 0.309852 4.2:+34372554 None:intergenic
AACGAGAGACCAGAGCTAAA+AGG 0.310860 4.2:-34361615 MS.gene003478:CDS
TTGCTCCACCTCAGGGATAT+TGG 0.327307 4.2:-34372301 MS.gene003478:CDS
CGAGGATCAAATACTATCTT+TGG 0.331317 4.2:+34365771 None:intergenic
AAAAGCTGGCGGCGCACTTT+GGG 0.332039 4.2:+34374160 None:intergenic
CTAGGAGTTCCGGGCATTAC+AGG 0.339967 4.2:+34372497 None:intergenic
AACAAAATGTTAACGCTTCT+GGG 0.340217 4.2:-34374399 MS.gene003478:CDS
ACCGGGAGTACTAGGAGTTC+CGG 0.345684 4.2:+34372487 None:intergenic
CCCTGATTCCAATGGATGTT+TGG 0.347086 4.2:+34359809 None:intergenic
CTAGGAACTTACATTGAAAC+TGG 0.351863 4.2:+34371352 None:intergenic
ATAAACCTGCTGGCTTTAAA+GGG 0.355108 4.2:-34371798 MS.gene003478:CDS
AAATCTTGTGTGGCGGAATC+AGG 0.355244 4.2:+34372659 None:intergenic
TTCAATTCCGCCACCTCATT+GGG 0.357442 4.2:+34368589 None:intergenic
TCCAAACATCCATTGGAATC+AGG 0.357482 4.2:-34359810 MS.gene003478:CDS
TAAAAGCTGGCGGCGCACTT+TGG 0.358326 4.2:+34374159 None:intergenic
TTTCAATTCCGCCACCTCAT+TGG 0.363697 4.2:+34368588 None:intergenic
AAGAAGAAGTTGCAGGAATC+AGG 0.365897 4.2:-34368382 MS.gene003478:CDS
GGAAAGAGAAGAACATGAAA+TGG 0.366620 4.2:-34361130 MS.gene003478:CDS
TGATTCACGGTTTGAGGCAT+TGG 0.369933 4.2:-34365257 MS.gene003478:CDS
TTTATGCACTCCTCCTTTGA+AGG 0.371786 4.2:+34368169 None:intergenic
GGAGTGCATAAATCAATTTA+AGG 0.377125 4.2:-34368158 MS.gene003478:intron
GAGGGTTGACAGCCGAATTA+GGG 0.385234 4.2:+34374255 None:intergenic
TGTTTCACAGATTTATATCT+CGG 0.392372 4.2:+34361703 None:intergenic
ATCCATGGTTGCTCCACCTC+AGG 0.393076 4.2:-34372309 MS.gene003478:CDS
TACTATTATAATGCTTTGAC+AGG 0.395407 4.2:-34371835 MS.gene003478:CDS
CAGGATGGACGGGAAAAGTT+GGG 0.396058 4.2:+34372516 None:intergenic
GGCATTGGACCGCAAGGAAC+GGG 0.399005 4.2:-34365242 MS.gene003478:CDS
AATGGAGGTTGAGCAGGAAT+AGG 0.399167 4.2:+34374233 None:intergenic
AAGAAGAAGATGATGGATTA+GGG 0.399464 4.2:+34374553 None:intergenic
GAACCATTTGATTCGGATCC+TGG 0.400634 4.2:+34368316 None:intergenic
AATGAAGGGGCAGCTGGACG+TGG 0.406522 4.2:+34374197 None:intergenic
AGCTGAATCAAGATCAGAAT+TGG 0.409415 4.2:+34360371 None:intergenic
GCAGCAGGATATTGATGAAA+TGG 0.411046 4.2:+34372242 None:intergenic
GACTTCTGAAGCCGCGTCTC+AGG 0.411196 4.2:-34360042 MS.gene003478:CDS
CTTTCAACTCTCGTTGGTCC+AGG 0.414381 4.2:-34363327 MS.gene003478:CDS
ACACCAGGAGGTTGAGAATC+AGG 0.415316 4.2:+34372161 None:intergenic
CATCTGCTGAGGGGAACATC+TGG 0.424887 4.2:-34372092 MS.gene003478:CDS
GAAGGGGCAGCTGGACGTGG+GGG 0.427000 4.2:+34374200 None:intergenic
GCATATATTCTTAGGCATCA+TGG 0.428010 4.2:-34360440 MS.gene003478:intron
CAGACAATACAGTAGTATTT+GGG 0.428630 4.2:+34368521 None:intergenic
GGAATAGAAGAGGATGTAAC+AGG 0.431810 4.2:+34368355 None:intergenic
GGGAAATGATTCACGGTTTG+AGG 0.433155 4.2:-34365263 MS.gene003478:CDS
CGCAGGACAAGCTGCGGGAG+AGG 0.437446 4.2:-34361176 MS.gene003478:intron
TGAAGGGGCAGCTGGACGTG+GGG 0.437614 4.2:+34374199 None:intergenic
GCAGGGGATGAACCCTAATT+CGG 0.438054 4.2:-34374267 MS.gene003478:intron
GGAAAACCTGTGCTTGTAGA+TGG 0.438272 4.2:+34372416 None:intergenic
TTTGATCAAGAAGAAGTTGC+AGG 0.440037 4.2:-34368389 MS.gene003478:CDS
CAGAGCTAAAAGGGAGGAGC+AGG 0.441328 4.2:-34361605 MS.gene003478:intron
TATTGTAGGGTAGATTTGCC+TGG 0.442537 4.2:-34370381 MS.gene003478:intron
CATGGATGGTATGGGTGGAT+AGG 0.443598 4.2:+34372325 None:intergenic
GGATCATGTAAAGATGCTTC+AGG 0.444198 4.2:-34360328 MS.gene003478:CDS
GGAAAACAGTGCTTAATTCA+TGG 0.444271 4.2:-34360007 MS.gene003478:CDS
ACCACGTGCTGGAAATGAAA+AGG 0.444633 4.2:+34372208 None:intergenic
GTATTGTCTGAGAGAGGGTC+TGG 0.444793 4.2:-34368508 MS.gene003478:CDS
TGGTGAGCTTTGTACGATAG+AGG 0.444797 4.2:+34368423 None:intergenic
TAGATTTGCCTGGTACTGAT+TGG 0.446942 4.2:-34370371 MS.gene003478:CDS
TGCACAAAAGGCCGCAATTG+AGG 0.448302 4.2:-34365475 MS.gene003478:CDS
ACAGGATGGACGGGAAAAGT+TGG 0.450966 4.2:+34372515 None:intergenic
ACGAGAGACCAGAGCTAAAA+GGG 0.452784 4.2:-34361614 MS.gene003478:CDS
GCACAAAAGGCCGCAATTGA+GGG 0.453511 4.2:-34365474 MS.gene003478:CDS
TGGAGCAACCATGGATGGTA+TGG 0.453607 4.2:+34372316 None:intergenic
GGAAAATTATATGAAAATGA+AGG 0.455482 4.2:+34374182 None:intergenic
AGCAGCGGGAGCAGAAATGC+TGG 0.457214 4.2:+34372121 None:intergenic
CCACGTGCTGGAAATGAAAA+GGG 0.462872 4.2:+34372209 None:intergenic
GGAGGTTGAGCAGGAATAGG+AGG 0.463244 4.2:+34374236 None:intergenic
CTCTAGAGACTTTCTACCTC+TGG 0.463701 4.2:+34359836 None:intergenic
GATTCAGAAGACGAGGATAG+TGG 0.464902 4.2:-34368193 MS.gene003478:CDS
TGTTCCCCTCAGCAGATGAC+TGG 0.465491 4.2:+34372097 None:intergenic
AAGCCTCTATGTGAGGCATT+AGG 0.468749 4.2:+34372350 None:intergenic
CCCGTCCATCCTGTAATGCC+CGG 0.470449 4.2:-34372506 MS.gene003478:CDS
TCGGATCCTGGTTGCACTGA+TGG 0.472882 4.2:+34368328 None:intergenic
TATGAAAATGAAGGGGCAGC+TGG 0.474627 4.2:+34374191 None:intergenic
TGGGCGGCGTAAGAGATTGA+TGG 0.475229 4.2:+34374421 None:intergenic
ACCTCCCCTTTAAAGCCAGC+AGG 0.476497 4.2:+34371793 None:intergenic
ATCTGTGAAACATGAGGATA+GGG 0.476617 4.2:-34361692 MS.gene003478:CDS
CCGGGAGTACTAGGAGTTCC+GGG 0.479194 4.2:+34372488 None:intergenic
ACGGGAAAAGTTGGGGCAGT+TGG 0.480355 4.2:+34372524 None:intergenic
GAAATGCTGGCAGCACCAAC+AGG 0.482497 4.2:+34372134 None:intergenic
AAGGGGCAGCTGGACGTGGG+GGG 0.482647 4.2:+34374201 None:intergenic
GCCTGGTACTGATTGGCAGT+TGG 0.484186 4.2:-34370364 MS.gene003478:CDS
GTTTCACAGATTTATATCTC+GGG 0.486215 4.2:+34361704 None:intergenic
CAATCCCTGCTTCAGTCTTG+TGG 0.487147 4.2:+34371860 None:intergenic
GCTGGAAATGAAAAGGGGCC+AGG 0.489782 4.2:+34372215 None:intergenic
CAGGCTCTTGGCTGTAGAGT+CGG 0.490013 4.2:+34368285 None:intergenic
TGCAGCTCCTGCATCATCAC+CGG 0.490119 4.2:-34374446 MS.gene003478:intron
ATAGAAGTAGGAGCAGGAAC+AGG 0.491114 4.2:+34372602 None:intergenic
AATCCCTGCTTCAGTCTTGT+GGG 0.491851 4.2:+34371861 None:intergenic
ATGGATGGTATGGGTGGATA+GGG 0.495281 4.2:+34372326 None:intergenic
AGCATCTAGCTGATCATTAG+CGG 0.495789 4.2:+34371891 None:intergenic
TGCGATCTCCCTGATTCCAA+TGG 0.496991 4.2:+34359801 None:intergenic
GAAGTAATTTCAGCACATAC+TGG 0.497178 4.2:-34372059 MS.gene003478:intron
GAAAATTATATGAAAATGAA+GGG 0.497891 4.2:+34374183 None:intergenic
AATCTGTGAAACATGAGGAT+AGG 0.498829 4.2:-34361693 MS.gene003478:CDS
GTATGAAATGGAGGTTGAGC+AGG 0.499181 4.2:+34374227 None:intergenic
GTTGGCATCCATAAAGTAGT+TGG 0.499359 4.2:+34372542 None:intergenic
AGAGTCTTCCAAACATCCAT+TGG 0.500125 4.2:-34359817 MS.gene003478:CDS
TGCTTCCAGTCATCTGCTGA+GGG 0.501155 4.2:-34372102 MS.gene003478:CDS
GATCTCCTAGCAGAATAGCT+AGG 0.504237 4.2:+34365555 None:intergenic
ATGAAGGGGCAGCTGGACGT+GGG 0.505446 4.2:+34374198 None:intergenic
GTTTCAGCAGCAGAGGGAGG+TGG 0.506523 4.2:+34374591 None:intergenic
CCTCCTGGTGTTACTCCTGT+TGG 0.507077 4.2:-34372149 MS.gene003478:CDS
CCAAACATCCATTGGAATCA+GGG 0.507489 4.2:-34359809 MS.gene003478:CDS
GAATCAGGTACTGGAACAGC+AGG 0.507999 4.2:+34372176 None:intergenic
ATAGAGAAGCCTTGTGGCGC+CGG 0.508501 4.2:-34359926 MS.gene003478:CDS
TGTAGATGGAGCAGCTGGAT+TGG 0.509082 4.2:+34372430 None:intergenic
GGGAGTGCACCACCACGTGC+TGG 0.511437 4.2:+34372197 None:intergenic
ACTGCCCACAAGACTGAAGC+AGG 0.511530 4.2:-34371865 MS.gene003478:CDS
GAGAAGAACATGAAATGGAA+AGG 0.513731 4.2:-34361125 MS.gene003478:CDS
CTAATGATCAGCTAGATGCT+TGG 0.516038 4.2:-34371888 MS.gene003478:CDS
TGATCTTGATTCAGCTGACA+TGG 0.519037 4.2:-34360364 MS.gene003478:CDS
CGAGGATAGTGGGCCTTCAA+AGG 0.520405 4.2:-34368182 MS.gene003478:CDS
CAGTTGGTCTCTACTAGTGA+TGG 0.521306 4.2:-34370348 MS.gene003478:CDS
AAGTAGTTGGGCGATAGTTA+GGG 0.521359 4.2:+34372555 None:intergenic
GTAGTATTTGGGACGGGCGT+TGG 0.521758 4.2:+34368532 None:intergenic
AGAAGATGATGGATTAGGGA+TGG 0.524223 4.2:+34374557 None:intergenic
CAACCAGGATCCGAATCAAA+TGG 0.524617 4.2:-34368319 MS.gene003478:CDS
GAATCATATCCTCTGCATAC+CGG 0.525933 4.2:+34359907 None:intergenic
TTGGCATCCATAAAGTAGTT+GGG 0.527790 4.2:+34372543 None:intergenic
GTACCTGATTCTCAACCTCC+TGG 0.528552 4.2:-34372164 MS.gene003478:CDS
GTGCTTGTAGATGGAGCAGC+TGG 0.528608 4.2:+34372425 None:intergenic
CTGCTTCCAGTCATCTGCTG+AGG 0.530922 4.2:-34372103 MS.gene003478:CDS
GATGGAGCAGCTGGATTGGA+GGG 0.531593 4.2:+34372434 None:intergenic
GGATTGGAGGGTAATATCAC+AGG 0.531763 4.2:+34372446 None:intergenic
AAAATCATCTCATGATTCAA+AGG 0.532449 4.2:-34359877 MS.gene003478:CDS
ACAAAGCTCACCATCAGCAC+TGG 0.532658 4.2:-34368413 MS.gene003478:CDS
AGCAGATGACTGGAAGCAGC+GGG 0.541855 4.2:+34372107 None:intergenic
GGAGAGAATCAAAGACCCTA+TGG 0.543294 4.2:-34361046 MS.gene003478:intron
AATGGTTACTCTGAATGCTC+CGG 0.543813 4.2:-34368485 MS.gene003478:CDS
GCAGGACAAGCTGCGGGAGA+GGG 0.545405 4.2:-34361175 MS.gene003478:intron
CTCTGCATACCGGCGCCACA+AGG 0.546986 4.2:+34359917 None:intergenic
GAGGTTGAGCAGGAATAGGA+GGG 0.547528 4.2:+34374237 None:intergenic
TCTTTCTCCCACTTTGAGAA+CGG 0.547622 4.2:+34365798 None:intergenic
TCAACATATGATAAACCTGC+TGG 0.549166 4.2:-34371808 MS.gene003478:CDS
GGCGTTGTTTCAGCAGCAGA+GGG 0.549258 4.2:+34374585 None:intergenic
AATGCTCCGGCTATTACCAC+TGG 0.549560 4.2:-34368472 MS.gene003478:CDS
GAATTGGTTGCACGCCCTTG+AGG 0.549986 4.2:+34360387 None:intergenic
CAGTGTTAGATTGCCTGTGT+TGG 0.550015 4.2:+34374129 None:intergenic
TTGTCTCGGTACTGCAGCTG+AGG 0.550217 4.2:+34372394 None:intergenic
AGAAGAACATGAAATGGAAA+GGG 0.550807 4.2:-34361124 MS.gene003478:CDS
GCATTAGGATCTGATGCAGT+TGG 0.551297 4.2:+34372365 None:intergenic
GGTGAGCTTTGTACGATAGA+GGG 0.552025 4.2:+34368424 None:intergenic
TCCGGGCATTACAGGATGGA+CGG 0.554977 4.2:+34372505 None:intergenic
AGAAATGGGGAAATGATTCA+CGG 0.555164 4.2:-34365270 MS.gene003478:CDS
CCGGGCATTACAGGATGGAC+GGG 0.555217 4.2:+34372506 None:intergenic
AAATAACTTTCAACTCTCGT+TGG 0.555691 4.2:-34363333 MS.gene003478:CDS
AGGCGTTGTTTCAGCAGCAG+AGG 0.556062 4.2:+34374584 None:intergenic
ATCTCCTAGCAGAATAGCTA+GGG 0.556877 4.2:+34365556 None:intergenic
TTTCAACTCTCGTTGGTCCA+GGG 0.557412 4.2:-34363326 MS.gene003478:intron
GGAGGTTGAGAATCAGGTAC+TGG 0.557933 4.2:+34372167 None:intergenic
GATCCTAATGCCTCACATAG+AGG 0.558216 4.2:-34372353 MS.gene003478:CDS
ATACTTGAAGAAGAAGATGA+TGG 0.559156 4.2:+34374546 None:intergenic
AGGCATTGGACCGCAAGGAA+CGG 0.559314 4.2:-34365243 MS.gene003478:CDS
CCCGGAACTCCTAGTACTCC+CGG 0.561127 4.2:-34372488 MS.gene003478:CDS
AAGGGGCCAGGAAAAGCAGC+AGG 0.561207 4.2:+34372227 None:intergenic
AAGTCAATGCTTAAAGAACA+AGG 0.563683 4.2:-34363358 MS.gene003478:CDS
TATTGTATCAGACAAGCTGC+TGG 0.567030 4.2:-34368618 MS.gene003478:intron
TGGTTCGCAGGACAAGCTGC+GGG 0.567632 4.2:-34361181 MS.gene003478:intron
AGATGGAGCAGCTGGATTGG+AGG 0.568440 4.2:+34372433 None:intergenic
GATGGCGCCGGTGATGATGC+AGG 0.568984 4.2:+34374439 None:intergenic
AAAGCTGGCGGCGCACTTTG+GGG 0.571914 4.2:+34374161 None:intergenic
TGTTGGTTGGCAGTAAAAGC+TGG 0.571931 4.2:+34374146 None:intergenic
TGATGGAGTAGGAATAGAAG+AGG 0.573030 4.2:+34368345 None:intergenic
GTTAGATTGCCTGTGTTGGT+TGG 0.576192 4.2:+34374133 None:intergenic
GAGTGGGCTGCACAGCAACT+TGG 0.577693 4.2:+34371374 None:intergenic
GCAAATTCCCAATGAGGTGG+CGG 0.578570 4.2:-34368596 MS.gene003478:CDS
CTATCCCTAGCTATTCTGCT+AGG 0.579222 4.2:-34365560 MS.gene003478:CDS
CGACCACCAGTGGTAATAGC+CGG 0.580608 4.2:+34368466 None:intergenic
GATGGATTAGGGATGGAAGT+AGG 0.580981 4.2:+34374564 None:intergenic
ACCAACTGCCAATCAGTACC+AGG 0.581773 4.2:+34370363 None:intergenic
GGCATTGCGGATATAGAAGT+AGG 0.582367 4.2:+34372590 None:intergenic
TTGATCAAATCCAGTGCTGA+TGG 0.583067 4.2:+34368403 None:intergenic
CGTGGCACCGTTCTCAAAGT+GGG 0.584929 4.2:-34365805 MS.gene003478:CDS
GGAGCAACCATGGATGGTAT+GGG 0.585140 4.2:+34372317 None:intergenic
GCGTGGCACCGTTCTCAAAG+TGG 0.585273 4.2:-34365806 MS.gene003478:CDS
GCTGCTCCATCTACAAGCAC+AGG 0.585375 4.2:-34372422 MS.gene003478:CDS
ATGTTCAACAGCTTTCAACT+CGG 0.586994 4.2:+34361645 None:intergenic
AAGGCTTCTCTATCTTCACT+TGG 0.587101 4.2:+34359936 None:intergenic
AGTTGGTCTCTACTAGTGAT+GGG 0.588232 4.2:-34370347 MS.gene003478:CDS
CCTGGTTGCACTGATGGAGT+AGG 0.588394 4.2:+34368334 None:intergenic
TCCCTGAGGTGGAGCAACCA+TGG 0.588442 4.2:+34372307 None:intergenic
CGCCACTGTGACACAGAATG+AGG 0.588689 4.2:-34371917 MS.gene003478:CDS
CCTACTCCATCAGTGCAACC+AGG 0.588729 4.2:-34368334 MS.gene003478:CDS
ACTACTGTATTGTCTGAGAG+AGG 0.589570 4.2:-34368514 MS.gene003478:CDS
CACAAAAGGCCGCAATTGAG+GGG 0.591059 4.2:-34365473 MS.gene003478:CDS
GCGAGAGCTGCGTAAAAGGA+AGG 0.591852 4.2:-34361151 MS.gene003478:CDS
GAAGCATCTTTACATGATCC+CGG 0.591894 4.2:+34360331 None:intergenic
TGAGGTGGAGCAACCATGGA+TGG 0.592573 4.2:+34372311 None:intergenic
CACTTTACTAAAATCTTGTG+TGG 0.592921 4.2:+34372649 None:intergenic
CTGGTTCGCAGGACAAGCTG+CGG 0.592961 4.2:-34361182 MS.gene003478:intron
CTATCCACCCATACCATCCA+TGG 0.595305 4.2:-34372324 MS.gene003478:CDS
AGGATGGACGGGAAAAGTTG+GGG 0.596070 4.2:+34372517 None:intergenic
TCCATGGTTGCTCCACCTCA+GGG 0.597381 4.2:-34372308 MS.gene003478:CDS
TCGTGCGGAAGAAGAACGCA+AGG 0.598559 4.2:-34365508 MS.gene003478:CDS
GATGCTTAAGGAGCGTGGCG+TGG 0.599149 4.2:-34365823 MS.gene003478:CDS
ATTCAGAAGACGAGGATAGT+GGG 0.600872 4.2:-34368192 MS.gene003478:CDS
GGGAGCATCTTCTGAACGAA+AGG 0.601329 4.2:-34365222 MS.gene003478:intron
GCTCCGGCTATTACCACTGG+TGG 0.602029 4.2:-34368469 MS.gene003478:CDS
GGTATGCAGAGGATATGATT+CGG 0.602226 4.2:-34359905 MS.gene003478:CDS
GCGGATATAGAAGTAGGAGC+AGG 0.603753 4.2:+34372596 None:intergenic
TTTACTAAAATCTTGTGTGG+CGG 0.603992 4.2:+34372652 None:intergenic
CTGGCAAATTCCCAATGAGG+TGG 0.604078 4.2:-34368599 MS.gene003478:CDS
AACTTACATTGAAACTGGAG+TGG 0.604902 4.2:+34371357 None:intergenic
GTCTGAGAGAGGGTCTGGAA+TGG 0.605847 4.2:-34368503 MS.gene003478:CDS
GCTATTAGACGAAGCCTCAG+AGG 0.606226 4.2:-34365442 MS.gene003478:intron
CACAGATGAGTGGTGTACAT+AGG 0.606997 4.2:-34372268 MS.gene003478:CDS
GTTGTTTCAGCAGCAGAGGG+AGG 0.607878 4.2:+34374588 None:intergenic
GAAGATGCTCCCGTTCCTTG+CGG 0.608703 4.2:+34365233 None:intergenic
GCGTAAGAGATTGATGGCGC+CGG 0.613325 4.2:+34374427 None:intergenic
TAGGAGATGCTTAAGGAGCG+TGG 0.613437 4.2:-34365828 MS.gene003478:CDS
TGTCTCGGTACTGCAGCTGA+GGG 0.614677 4.2:+34372395 None:intergenic
TTTAACATAATGTTCAAACA+AGG 0.617075 4.2:+34365533 None:intergenic
ACCTGCTGGCTTTAAAGGGG+AGG 0.618538 4.2:-34371794 MS.gene003478:intron
CTGCTTAAACCCCTCAATTG+CGG 0.621226 4.2:+34365464 None:intergenic
CAGCAGATGACTGGAAGCAG+CGG 0.624812 4.2:+34372106 None:intergenic
TACAGCATCACGACCACCAG+TGG 0.625947 4.2:+34368456 None:intergenic
GCAACCATGGATGGTATGGG+TGG 0.628786 4.2:+34372320 None:intergenic
AATACAGTAGTATTTGGGAC+GGG 0.631156 4.2:+34368526 None:intergenic
CGTCTCAGGAAACTGACGAT+GGG 0.632849 4.2:-34360028 MS.gene003478:CDS
CAATACAGTAGTATTTGGGA+CGG 0.635375 4.2:+34368525 None:intergenic
GTTTGAGGCATTGGACCGCA+AGG 0.636101 4.2:-34365248 MS.gene003478:CDS
ATCTGATCCAAGATATAACA+AGG 0.636281 4.2:-34359961 MS.gene003478:CDS
ACTTACATTGAAACTGGAGT+GGG 0.636689 4.2:+34371358 None:intergenic
GAGTTCCGGGCATTACAGGA+TGG 0.639013 4.2:+34372501 None:intergenic
CTACTGTATTGTCTGAGAGA+GGG 0.639250 4.2:-34368513 MS.gene003478:CDS
GCAGGATATTGATGAAATGG+TGG 0.640371 4.2:+34372245 None:intergenic
GCACCAACAGGAGTAACACC+AGG 0.640657 4.2:+34372146 None:intergenic
ATCGTCAGTTTCCTGAGACG+CGG 0.642398 4.2:+34360031 None:intergenic
CTATGTACACCACTCATCTG+TGG 0.642650 4.2:+34372269 None:intergenic
CTTGTGGCGCCGGTATGCAG+AGG 0.645188 4.2:-34359916 MS.gene003478:CDS
ATCTTCAGATTCAGAAGACG+AGG 0.645316 4.2:-34368200 MS.gene003478:CDS
CGATAGTTAGGGTCAGAGCA+AGG 0.646253 4.2:+34372566 None:intergenic
CACGTGCTGGAAATGAAAAG+GGG 0.651381 4.2:+34372210 None:intergenic
GGATAGTGGGCCTTCAAAGG+AGG 0.652790 4.2:-34368179 MS.gene003478:CDS
ATATAAATCTGTGAAACATG+AGG 0.654245 4.2:-34361698 MS.gene003478:CDS
TAAACCTGCTGGCTTTAAAG+GGG 0.658608 4.2:-34371797 MS.gene003478:CDS
TGTAACCAATATCCCTGAGG+TGG 0.659237 4.2:+34372296 None:intergenic
GTCAGAGCAAGGCGGCATTG+CGG 0.659633 4.2:+34372577 None:intergenic
AAAATTATATGAAAATGAAG+GGG 0.660721 4.2:+34374184 None:intergenic
TGGTTGGCAGTAAAAGCTGG+CGG 0.670102 4.2:+34374149 None:intergenic
GCGTCTCAGGAAACTGACGA+TGG 0.673809 4.2:-34360029 MS.gene003478:CDS
TGAGGCAACATTAACCTCTG+AGG 0.674577 4.2:+34365428 None:intergenic
TATATACTAACAGAATGTGA+CGG 0.675455 4.2:+34374361 None:intergenic
TTACAGCCTCCACAGATGAG+TGG 0.676991 4.2:-34372278 MS.gene003478:CDS
TTACTATAACAATCGAACCA+AGG 0.679735 4.2:-34370316 MS.gene003478:intron
TGTACACCACTCATCTGTGG+AGG 0.681421 4.2:+34372272 None:intergenic
CTGCTGGCAAATTCCCAATG+AGG 0.682038 4.2:-34368602 MS.gene003478:CDS
GCTTCCAGTCATCTGCTGAG+GGG 0.683518 4.2:-34372101 MS.gene003478:CDS
AGAGACCAGAGCTAAAAGGG+AGG 0.686025 4.2:-34361611 MS.gene003478:CDS
GTGAAGATAGAGAAGCCTTG+TGG 0.691864 4.2:-34359932 MS.gene003478:CDS
CTGCCCACAAGACTGAAGCA+GGG 0.691968 4.2:-34371864 MS.gene003478:CDS
ATAGGGTAAGCCTCTATGTG+AGG 0.692924 4.2:+34372343 None:intergenic
AATCAGGTACTGGAACAGCA+GGG 0.700220 4.2:+34372177 None:intergenic
ATGCAGAGGATATGATTCGG+CGG 0.708222 4.2:-34359902 MS.gene003478:CDS
ATCCTCATTCTGTGTCACAG+TGG 0.709329 4.2:+34371915 None:intergenic
ACTATTATAATGCTTTGACA+GGG 0.711480 4.2:-34371834 MS.gene003478:CDS
GGCTGTAACCAATATCCCTG+AGG 0.714417 4.2:+34372293 None:intergenic
TCTCAAAATACCTTAAAACG+AGG 0.724653 4.2:+34365753 None:intergenic
CCAACAGGAGTAACACCAGG+AGG 0.749977 4.2:+34372149 None:intergenic
TAGTTAGGGTCAGAGCAAGG+CGG 0.758647 4.2:+34372569 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr4.2 gene 34359788 34374622 34359788 ID=MS.gene003478
chr4.2 mRNA 34359788 34374622 34359788 ID=MS.gene003478.t1;Parent=MS.gene003478
chr4.2 exon 34374550 34374622 34374550 ID=MS.gene003478.t1.exon1;Parent=MS.gene003478.t1
chr4.2 CDS 34374550 34374622 34374550 ID=cds.MS.gene003478.t1;Parent=MS.gene003478.t1
chr4.2 exon 34374372 34374463 34374372 ID=MS.gene003478.t1.exon2;Parent=MS.gene003478.t1
chr4.2 CDS 34374372 34374463 34374372 ID=cds.MS.gene003478.t1;Parent=MS.gene003478.t1
chr4.2 exon 34374130 34374285 34374130 ID=MS.gene003478.t1.exon3;Parent=MS.gene003478.t1
chr4.2 CDS 34374130 34374285 34374130 ID=cds.MS.gene003478.t1;Parent=MS.gene003478.t1
chr4.2 exon 34372060 34372687 34372060 ID=MS.gene003478.t1.exon4;Parent=MS.gene003478.t1
chr4.2 CDS 34372060 34372687 34372060 ID=cds.MS.gene003478.t1;Parent=MS.gene003478.t1
chr4.2 exon 34371795 34371958 34371795 ID=MS.gene003478.t1.exon5;Parent=MS.gene003478.t1
chr4.2 CDS 34371795 34371958 34371795 ID=cds.MS.gene003478.t1;Parent=MS.gene003478.t1
chr4.2 exon 34371364 34371401 34371364 ID=MS.gene003478.t1.exon6;Parent=MS.gene003478.t1
chr4.2 CDS 34371364 34371401 34371364 ID=cds.MS.gene003478.t1;Parent=MS.gene003478.t1
chr4.2 exon 34370317 34370395 34370317 ID=MS.gene003478.t1.exon7;Parent=MS.gene003478.t1
chr4.2 CDS 34370317 34370395 34370317 ID=cds.MS.gene003478.t1;Parent=MS.gene003478.t1
chr4.2 exon 34368159 34368629 34368159 ID=MS.gene003478.t1.exon8;Parent=MS.gene003478.t1
chr4.2 CDS 34368159 34368629 34368159 ID=cds.MS.gene003478.t1;Parent=MS.gene003478.t1
chr4.2 exon 34365764 34365847 34365764 ID=MS.gene003478.t1.exon9;Parent=MS.gene003478.t1
chr4.2 CDS 34365764 34365847 34365764 ID=cds.MS.gene003478.t1;Parent=MS.gene003478.t1
chr4.2 exon 34365443 34365583 34365443 ID=MS.gene003478.t1.exon10;Parent=MS.gene003478.t1
chr4.2 CDS 34365443 34365583 34365443 ID=cds.MS.gene003478.t1;Parent=MS.gene003478.t1
chr4.2 exon 34365223 34365329 34365223 ID=MS.gene003478.t1.exon11;Parent=MS.gene003478.t1
chr4.2 CDS 34365223 34365329 34365223 ID=cds.MS.gene003478.t1;Parent=MS.gene003478.t1
chr4.2 exon 34363327 34363450 34363327 ID=MS.gene003478.t1.exon12;Parent=MS.gene003478.t1
chr4.2 CDS 34363327 34363450 34363327 ID=cds.MS.gene003478.t1;Parent=MS.gene003478.t1
chr4.2 exon 34361606 34361749 34361606 ID=MS.gene003478.t1.exon13;Parent=MS.gene003478.t1
chr4.2 CDS 34361606 34361749 34361606 ID=cds.MS.gene003478.t1;Parent=MS.gene003478.t1
chr4.2 exon 34361047 34361193 34361047 ID=MS.gene003478.t1.exon14;Parent=MS.gene003478.t1
chr4.2 CDS 34361047 34361193 34361047 ID=cds.MS.gene003478.t1;Parent=MS.gene003478.t1
chr4.2 exon 34360326 34360448 34360326 ID=MS.gene003478.t1.exon15;Parent=MS.gene003478.t1
chr4.2 CDS 34360326 34360448 34360326 ID=cds.MS.gene003478.t1;Parent=MS.gene003478.t1
chr4.2 exon 34359788 34360105 34359788 ID=MS.gene003478.t1.exon16;Parent=MS.gene003478.t1
chr4.2 CDS 34359788 34360105 34359788 ID=cds.MS.gene003478.t1;Parent=MS.gene003478.t1
Gene Sequence

>MS.gene003478

ATGGCTCAACCACCTCCCTCTGCTGCTGAAACAACGCCTACTTCCATCCCTAATCCATCATCTTCTTCTTCAAGTATGTCTTTCTTTCATGCTTCATATTTATTATTTCAACCGAATTGTTCGATTCATGCCTAATTGTTTAATGCCACTCTTTTGCAGCTCCTGCATCATCACCGGCGCCATCAATCTCTTACGCCGCCCAACAAAATGTTAACGCTTCTGGGAATTCTCAGCAACAGCCGTCACATTCTGTTAGTATATATGGTCATGTATGTAATGTTACTGTAGTTCAATTCCGTCTCATTGTTTATACTTGTTGTCCTTTGATTTAATGCAGGGGATGAACCCTAATTCGGCTGTCAACCCTCCTATTCCTGCTCAACCTCCATTTCATACTCACCCCCCACGTCCAGCTGCCCCTTCATTTTCATATAATTTTCCCCAAAGTGCGCCGCCAGCTTTTACTGCCAACCAACACAGGCAATCTAACACTGTAAGACTCATGCTTTTGTTTTAAATTCATGATAGAATATATGGGAGATGGGGTTGGGGTTATTCGTATGTTAGGGATTAAGATCAAATCACAACTTAAACTATGCTTGTCTGAGTAGACGGATAATTTAGAATGAAAATTATTCAATCAGTTCGACAGTGTGGGGAAGTTGGTAATCGAGTGCAAAATTGCAAGTGAATGCCAAAACCTTGCCATCCCCTACTTCATTTGTAGAACAGATTTGTAGGGATTGAATTTAGCTGGTCCAAGTTAGGCGTTGCTTAAGTAGGTTTGACCTTTTTAAAAATTCCAAGTCATAAACCTCCTTGTTAAGGTTTCTTTACATCTGGTCTGACCTTGTTGGAAGCCTCCTTTGGCTTAGTAGGCTAGTTAATGACTTATTTCATATTAAAGATATTAGGATATATAAATAGATACCATTCAACTTATTTCTGAGTAGGTTAAAGTGCTAGTATACCAATGAGAAGAAACTTTATACATTATAAAGTACAAGTTGTGACATTTAAACATCTACTATGAAAGAGCACAAGACATAAGGGGGAAATGGACTTTACTGGGCTAAGCTGTCCAAGGCTTGAGTCTGTCTTATTTATCCGATATTGGTATTTTGTAAGGTCTGTTATGATTTTATCCTTATGTAGCTCCCCCCCTATTTGCTACCTTTTCATCCCATTGTGCCTTTTGAATACCCACATTGAACCAAGTGATCATTGACTGTAGTTGGGACTGGCATAGATAGTAGAGGCGCTTAAGGAAAACAAAATTTGCATTAAGTAAATGATGCAAAATGCAAGTAACTTCGAATTTTATATACACAGAAGTTTAAATAACAGTGGAAAGGTTGATTGATATCAAAGCTGGGTGATGTTATTGTAATGACATTATGTGGCATATCTGTTACATTTAGTTTTGATTGGCACATATTAGTAGGAAATAATAAAGATGATTTATATTCAAAATTATTATGTGTTCACTCTGGTCATCTAAATTGAGGAATAGGTATCATGTAATAATCTGGTGTGAGTTGTCAAAATACTCTCTCTGTCCCATATTTTATAAGTCGTTTTAGCGAGAAAAGGATTATCCCGTTTCATATCTCGTTTTACAATATCAATGAAGTATAATTATTTTCTTCATTATTATCCCTTAACCATTATTAATATCTCTTTTCAATTCCTGTAATTAATTGGATTTGGAGTTTGAGAGATAAAGGGTAATTTAGGAAAACAAATATTGTTTACCTAATAATATCTATAATATTAATTGTATTTCTTAATTTTGTGCTAAAATCTTATATGACTGTATAATATGGGCTGGAGGGAGTAATGGCTGACAAGCATTGTTGTAATGTAGTGCACACAATACTCAAGAAAAGAGCTGAATAATAATATTTTCCTCCCACTTCTATTTGCTAATTGTAGAATATGCCTGATTCCGCCACACAAGATTTTAGTAAAGTGTCATCTGCATCAAGTAACTTACATCCTGTTCCTGCTCCTACTTCTATATCCGCAATGCCGCCTTGCTCTGACCCTAACTATCGCCCAACTACTTTATGGATGCCAACTGCCCCAACTTTTCCCGTCCATCCTGTAATGCCCGGAACTCCTAGTACTCCCGGTCCCCCTGGATTAGCAAAACCTGTGATATTACCCTCCAATCCAGCTGCTCCATCTACAAGCACAGGTTTTCCCTCAGCTGCAGTACCGAGACAAAATATGCCAACTGCATCAGATCCTAATGCCTCACATAGAGGCTTACCCTATCCACCCATACCATCCATGGTTGCTCCACCTCAGGGATATTGGTTACAGCCTCCACAGATGAGTGGTGTACATAGGCCACCATTTCATCAATATCCTGCTGCTTTTCCTGGCCCCTTTTCATTTCCAGCACGTGGTGGTGCACTCCCTGCTGTTCCAGTACCTGATTCTCAACCTCCTGGTGTTACTCCTGTTGGTGCTGCCAGCATTTCTGCTCCCGCTGCTTCCAGTCATCTGCTGAGGGGAACATCTGGTGTGCAGACAGAAGTAATTTCAGCACATACTGGTATGCCCACTGGTGTGCAGACATGTATTAGTTCATTGTTGTGGTTTGAGAAATGAGAATACAATTCACTTTCCTTACATTTGCGGTACTTATGATTGCAGATGACAAGCACAAATCAAACGCCACTGTGACACAGAATGAGGATGCCGCTAATGATCAGCTAGATGCTTGGACTGCCCACAAGACTGAAGCAGGGATTGTATACTATTATAATGCTTTGACAGGGCAATCAACATATGATAAACCTGCTGGCTTTAAAGGGGAGGTACTGATACTGATTATCTACGTTCTTAGTAGATCTTGTACGTTTTCATGTCTTGGATCACTATACAATTATATGATTTTTTAATAATATAAAATTTTCAAATAATTCACAAGTCACAATGTTCTCTAATGTAGTTTATGTTATCAGCATATATTGTTTGATCATTTTAAATAATGGATATCGGATACCCTAACAGATAGGAAATCTTAAAAAAACTAGATAAAAAACTAGATATTTGTAGACTACAACCAACACAATAATGGCACACAACCATATCAAATTATTTTAGATGCCCATTCTTACTAAGCAAAATCATTTATTATCATAAATGAGATAATTTGATCACTTTATTTTTTTTAATACAATTCATTTATATTTTGCATGGGTATGCAGGCTCACCAAGTTGCTGTGCAGCCCACTCCAGTTTCAATGTAAGTTCCTAGCTTGTCTCCTGGTGGGAAAATTTTCCTACACTCATTTGTTTATTTCTCTTTGCTAATCTACTGTTGTTGTTTTCTAGGATCCCTATAAAATGTCCTTAATTTCCATCTTTAATAAAACATGTATAATTCAACAGTTTAAAGGAGTCGTCGGCACTTTGCTGGTAATGGTATTGCCAAAAACTGTTAGTTACAAACTTAGGAAATAGGATCATGTTATGGTAATAAAATTAAAATCTTAATTTTATTAATATATTTGGAAGTTGGGAGGAAAAAGGGGAATCACAGGAAAAGAAGTAGAAGGAATGGACAAAAAAGAAATTTTCTCTCATCCCTTGGATGTTTAAAATGAATAAAGAGAATGAAATGAAGGGTTAGACAATGACATGCAAATTATTGCAGAACATTTTAATCTATCGTCATTTAGTTCTGCAAAGATCCCATCAGCCAGTATTCCTAAGTTTTGTACCCTGCATGTAGAGATATGAATTTATGTTTGATGTTCTAATAGACCAATCATCAGTGACCTTCAGTATCAATACTGTTGGGCGGCAAAAAAAATAAATAAATAGTAATTGCTAGAAATTCAACCACACCTTATGTGATGCTATAGTGCTCGTTCAATAATGAGGATATTCAAGAGAACCTTTTTCACGGGTTAGGTGGCCTTTTTGTATTTTCATTTTTATTTTCTTCCGTGTATGCGACATTGTTATTGGCTAACTGTCGGGCCTGAAAAGTATGTGTTAGTTTGAAACAATCGGTGTTATTAATATTGATGGCGGAAAGCCAAAACTCCGCCATTTGAAGCCATCTTAAACTCCATGGCACCACCATCCTTCACAAATTGGCCGTGGCGGTTGTAAAAAAATCCGCCACCATAATCTGACATCGCTCATATTTGACAACACGAGAAACAATGATTTAAAAACTTACCTTGTCATGTTTTCCTATTGTAGGGTAGATTTGCCTGGTACTGATTGGCAGTTGGTCTCTACTAGTGATGGGAAAAAATATTACTATAACAATCGAACCAAGGTATGATTCTTATTTTTCTATCTTAACTTTATGATCTCGACCATTTTTTTATTTCCCCCATCACTTTCCTTGAATACCTGTCTCTTTGGGATGTATTAACTCTTTGGGATGTATCATTCTTGGGCTTCCGGCTAATAACTTAAGCTTCAAAGAGAGATGGTCCATATATGTCCAAATTGTTAGGAGTATGATCCTGGCTGCCCTGTATTTTGCAATGAAGTTAGACTGCTTCATAATGTAAAATAGACTGTCTTGGATTGAGAGGGGGAGTGAAACAGGCAAAATCTGAGATTATAACACAAGTCATAACATCTTACCTAAAATGATAACAATAACAATGGCAAGCAACATTTAATTAAATTTGAATTGATATGTATATGAAGCTCACGTCGCAAGTTTAATTTAAAACTCATAAGACATAATGTAATAGACAGATATTTGACACAAAAATCTGAATCACTGAAATGAAAAAGCCCAACTAATAAATATCTGATTGAATATTACATGCCACAATCAGAGAAACAAAACAGAGGCTGAAAACAGTTGGACTTTACAGCAAGCAGCTGAGTACAACCACAACCAGAAGCAGCACATCAAAGCCAGCCAGGAAGAGACCAATCTGCAACTGATCCTCTCCACCTGGCCCACCGACATGCCTTTCTTTCCCAACCGTAACCTACAAGCTACTTCAAATAGCAGCTACAAATCAAAGCTTAGAACCCACAGCTCAAAAATCAAGGAGAGTGAATAGTTAGTAGGGAAAGGATCAAATGGATGACTAGAGTTTATAGGGATTGGAGTCTTAAGATTTCAAGGGGCCTTGATTTTCATTTTTTGGAATTGGGTGACCAGGCCATTGGATGATTCCAGACAACCACACCAAATTGCTTTTTTAGCTCTGATCGGGATCATAGCTGCAAGCAAAACTCGGAAACCTGGGATACTAGGATCTAACATGTGATTTTAATTACTTGTTTGTCCACATTTCATGCACAAAGAACAAGTGTGCCGGGGTGTGTTAGAGATGCACAAACCATTCTTGGTAGTATAGTTGGAGACATTGGCAAATCTCGAGGCTCTGTTCTTTTTGTTTAGACAACAGTTGTTAATAGAATTAACAAAAAATTTACAGGCTCTTCTGCTTCACACTGTCCTTTCCCTTGACATGTGTATAATGTGCAAGTCAGGTTCTAAAACTGTATCTCAGTTGATTGCTGCCCTGCAAAATAGATACTTCTCTATCTAACCTTTGTGTGGTTTTTTATCAGCACTTGGCGTGTCCTACCTTACAGAAGTTTTTTTGTTGGTTTGCACAAAAGCAATGGGGCATATTTTATTATCAATATAACCTACATATTCTACATACTCTGTCCTAAATTATAAGCAAAAATGGGTCAATTAAAGTTGATGTGTTTGGTTCAAAATTTTGACCAAATACATCAATTTTCTTTGACCAAATTTCGCTTGACAGAGGGAGTAGTGGTTATTAAGTCAATGCATTAATTTAGCATTAACCACCCTTAGTTTTCCAAAATAAGCAACACATTCACTAGAACTTTTTAAATTGGATAAATTTTGTTTCATATATATATATATACACACACACACTGGTATTACTGTTATTTACGTTGTGATGGCATTTATGTATGATGTCATTGTTTATTCTTTGGGCTTTGTATTGTATCAGACAAGCTGCTGGCAAATTCCCAATGAGGTGGCGGAATTGAAAAAAAAGCAGGACAGTGATGTTACAAAAGATCATCCAACGCCCGTCCCAAATACTACTGTATTGTCTGAGAGAGGGTCTGGAATGGTTACTCTGAATGCTCCGGCTATTACCACTGGTGGTCGTGATGCTGTAGCTTCTAAACCCTCTATCGTACAAAGCTCACCATCAGCACTGGATTTGATCAAGAAGAAGTTGCAGGAATCAGGAGCACCTGTTACATCCTCTTCTATTCCTACTCCATCAGTGCAACCAGGATCCGAATCAAATGGTTCAAAAGCAACCGACTCTACAGCCAAGAGCCTGCAAAATGATAATAGCAAAGACAAACAAAAAGATGCTAATGGTGATGCTAATGTCTCTGATACATCTTCAGATTCAGAAGACGAGGATAGTGGGCCTTCAAAGGAGGAGTGCATAAATCAATTTAAGGTAAATTTGTTTTTTTCTTTGAGCTGATGTAGTTCATGTTCTCTTCTTTCCTTTTATTGTCTTTGTTTCTGTTATCAGGAAACCTGATCTTCCAATGATTGCATTATTTTTTTAACTATGCTTAAATTATCGTTGGAATATATACCTATGACTTCCTTTTTTTTTTCTTTCTTTTTTTCTTCTAAACCTTTTTTCACCCATATATATTTGGACATACTTTTGGTTGGATGTTACTTGTTGCTTTTTTATTTTATTCCTAGAGATTTTATCATTTAATTTTAAAATTAATTTATGGTTTATGGTTTATGAAAGGAAAGTTCTATCGGACAGCAGTCAGACCGGCAATGTTGTATGGTACGGAGTGTTGGGCGGTTAAGAGCCAACACGAGAGTAAAGTAAGCGTAGCGGAGACGAGGATGTTGCGTTGGATGAGTGGTAAGACTAGACATGATAGGATTAGGAATGACATCATTAGAGAGAGAGTGGGGGTAGCACCTATAGTAGAAAAGTTGGTAGAAAATAGGCTTAGATGGTTTGGACATGTAGAGAGAAGACCCGTAGACGCCGTGGTAAGAAGAGTAGATCAAATGGAGGAGAGTCAGGTTAAAAGAGGTAGAGGAAGACCTAAGAAAACTATTAGAGAAACCATTAGAAAAGATTTAGAGGTCAATGAGTTGGATCCAATTATGGTCTTTGATAGAACATTATGGCGGCATTTGATCCATGTAGCCGACCCCACTTAGTGGGATAAGGCGTTGTTGTTGTTGGAAGATTGTTAAATTGCTTAATATTTGTATTTAAAATTAAATAGCCTATTACACCATTTGTGTTGAGAAAAACAATTTTTTTTTTCCAGAATCACAATTCATGACCTAGTACAGTTTTAATACCCTACCTTTGTTTGGATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGGATGGGGGTCAACTCACTCTAGTATCGATGAAATTTAATGTCAGCAAAGAGTTATCAAGTAGAGTTATTCTTACAAGAGTTACCTCTAGAATAAGTTGATCCCCACCCCATCTATATTCGTATATACAAAGGATCTAATGTATTCTTACACTGGTCAATAACTTCTGGATATCTATATCTTTTTAGTAGATATCTGTATTATTAAACTCGCGGTTGGAATCGTTGGATTAAGTTACTCACACAGATCTATATAAAACTTTATTTTAATGTAAAATCATTTGATATGTCAATGGGATACTTCAAAATTAACGGCTTCGGCACTTATATTAAATGACACTAATTTTGACCAATCCCATTGATGTATCAAACAATTTTAGATTAATGCAAAATTTTATAGATAAGATTATCACTAGGCAGTCATGTTTTTGGCTCTGGAGATTTGTTTCGAGTAAGAGCTAATACCCATTACCTTCAAAAGAACTCTTTGTTTTTTCGATTGCTCACTGGGTTGTCTTTCTGACACCTCCTTGGTGTTTAAGCTCATGGTCCTCTTGAATAAGCAAAATGGTATGGTTTGATGGCTTTGTTTATATATTTCTTAGGAACTTTTTCTCCTGCGGTCTTTTTGTTTTTTTTTTTGTGTGAAAGATATCTTCTGTTTCTGTACCTCCCTTTCTGTGTAGTAAAACTACTGTAAAAAAAAGTTAAAAAGGGATTTCGATCGTGCACATATATCTCGCTTGGTAGCAGATTTAGAATTCTATTTGTATAAGTACGAGATACAGGGTTTCTCCAGTCCATTGCATTTTTAAATGGGATTGGAAGTTTGACTGGTGAACATTATGATGTAATTTGATCCATGTAGCCGACCCCACTTAGTGGGATAAGGCTTGGTTGTTGTTGTATTGGAAGTTTGACTGGTTGTTTCTTGAAGGTAAAGAATTTACAAATGAAAAATCAATCGACTGATAAATTGGTCTCGCATGTCCAAGCTAATAAATTGGCCTCAGCGGGAAGCAGAAATGGAAAATTTAAGTGTTTCATATATGTTTAATTTATGTACTGATAGTTGACCATTCTATTTTCATGTCAAATATTACAATACCGAATGAAAATCTTGATAGTATGAAATTGATTCCTTTCTATCTGCATTATTACATACGTTTATGATCTGCTAACTGCAGTATTACATACCTTTATGATCTGATAATGATGTTGCTCTGGTTGAAGATTTTAGTCTGTGTTCTGGTCAGATTAAAAAATTGTATAAGTGGGGCAATACACACCATAAATGCACTCTCAAATGTGCCTTAGTCTAAATCTAGTATTATTTTGTATTTATCTGTTCCTATGGATTTTGTAGGAGATGCTTAAGGAGCGTGGCGTGGCACCGTTCTCAAAGTGGGAGAAAGAACTACCAAAGATAGTATTTGATCCTCGTTTTAAGGTATTTTGAGACCAAATATTTTCCATTATTTTTTTGGGGAGTTGGAGCCTTTCCTTCATCTGGAACTCCATATAATTGGTTTGGTTGTGCATTAGTTAATTCTTTCCAAAAAAATTATATACCCTCCATCTTTGTTGTCATCTGCAAATTTAAAACTAATGGCAATATTTAATAATACAGGCTATCCCTAGCTATTCTGCTAGGAGATCCTTGTTTGAACATTATGTTAAAAATCGTGCGGAAGAAGAACGCAAGGAAAAACGTGCTGCACAAAAGGCCGCAATTGAGGGGTTTAAGCAGCTATTAGACGAAGCCTCAGAGGTTAATGTTGCCTCAATTTGGAGCTCATTTGTTCTTATAATTGTTCTGGTATCAAGTCTATCTACCTTCAATTTGTGGAATTATTGAAAGTTTGTGGATCATTCCTTTTTCAGGATATTGATGACAAGACTGATTATCACACTTTTCGAAAGAAATGGGGAAATGATTCACGGTTTGAGGCATTGGACCGCAAGGAACGGGAGCATCTTCTGAACGAAAGGTGCCACTTTGAATTTAATTGGACATTTTTAAACTCTCTTAACTTCATTTTCTTTGTATGTGATTCACGTAAGCATCATCCTTACCATTAGATTACTTATTTGGATTTTTAGTTTTCGCACTGATCTTAATTTAGAGTCTGCTAGCCAAGTTGATCTGTTGCACCTGCCAAACATTTACACATCATTTGATATTTTTTTCATTTAAGGTTATGGATGAGAGTCTTCATTTATACACTTGGCATTCTTAATGTGGAAATCTAGTATTTGTTTTTTATGTTTAAGTCCTTGAATTTCTTAGCCAACTACTCATGTATGTATGTTGGATATAAAAATTTGAAAGGGCTGGTATTTGACTATCTTGGTAGGCTGGTTTTTTAATTTAATTATAATGCTTCCTTTAGTAGCAAACAAATTTTGTTGATACTGCATTCAACCTTGGACAAGGGGTGCCTTGGCATGCAACCATGTCTCTAGTAGATTATTGCAAGTTTGATTCATGTAATCGGCCTCTTTGCACTTGCAAGGTAAGGCTGTGTACAATTAACCTATAATGGGTGACCCTTCACTGGCCCCATCACGGTGGGAGCTTTGTAGCACCAGTTTCCTTTATAGTATTCAACCTAAGAGAGTGATCTATGTATAATTCAGCCATTTTCTGATTCAGGACAATGTTGGCAAATGTAGATCTTTTGGCTTAGAAATATAACATAGTGTTTGAAAGAACCTCATATCCCAAGATGGGTAGGGGATGATTAACAACCTACCTTGTAATGAGATGACTGATGTCAGTGTTCTAACAGTGCTTGTGAGAAATAACATAAACTATTGAAATCCAAGGTTCTGTTATCTTTTCAGTTGAATATTCAATATTATGTTAAAATAGGAGTACACGTGTTAATGTCTTGATCCCTATTATATGCTTTCTTTGGGTTTTTTCCTATTAATTTGCTTTGATACTCATGTTGTCCATGCCACTGTATTCGAGTTTTTTATTTTGCAATATTGCTTTCTTATGGTCTCAGATTGATAATGTTTAAGGAATAAATCATTAAGGTCATCCATGGTTCAGCTTAAATTAGTACCGGGAAATTTTTTTTGGGTTGAGAACGTGGGATTGAACAATCATATACTTGCTTGGTAATTGAAACAGTAACACTTGTTTTTGTTTGAGAATAGCCATCTTCTAGGCTCTAGTGCATGACTAGTAGTGACCTTAGGAATGAAAGCATACTATTTCCTTCTTACTCCTTTATATTCCACCTTCTCTTCGAAGGACACCAAGAGATGGAATTTCTGTTAGTGTAACTCATTTCCTTATAACGAAAGGCATAAAGGCAAACAAACAAATCAAGTCATGCTTGCTGCATGCGGGTGTCTTCCTATTTCACCAGTGTCAGCACGTTTGTTGTATGCAACAGTTCATCCAAAACGAATGCCACCTTTCAAGCCATCCCTTTTGATTTCTGTTTCTCGAAATTTGGTACATCCGACTCAGCTAAGTTCTTGCCTTTGTCTGTATATATATTGTTTTAGTTTGGATCCTCATTTGCATTGATATTGAACTTTTTCCTAGACAGAGAAATGATTTCTAATGATTATGCTTGAAAGCAACATGAGTCAGCAGGTAGTAGGCTAATGACAGACTCTCGGATTCACTGTGGGTGTGTCCTTATGCCCTCTAAACTCTTTGGATTTTGCATGGTAAATGGTTTCTTATGTCAATGTAATATTTGCAGAATCCTAGTTGATGGGTTTCATGTTTGTGTTTCAGAGTGCTTCCTTTAAAGAAAGCCACTGAAGAAAAAGCTCAAGCAATTCGTGATGCTGCTGCTGACAGTTTTAAGTCAATGCTTAAAGAACAAGGAGAAATAACTTTCAACTCTCGTTGGTCCAGGGTATGAGCATATACTCCCTCCGTCTCACAATAATTGTCTCTTTACTATTTTTTATTTTTCTCAAAATAATTGTCACTTTAGAATACCAATGCAGCATTTATTATTTTTTTCCATTATTATACCCTTATTTATTAAATTTCATCCAACTTAACTACTCCACTAACTACAATTAATAAGGATATTTTAGTAAATGATACTTAATTTACCATCAAAATCAACACAACTAATCATTTCCTTAATAACCGTGCATAAACCTTAAACGACTATTATTTAGAGACGGAGGGAGTATTATGAATAAGTTTTGAAGCACACATCATATCTCAAGTGTTGTGTCTGTATGACATGCAAACGAAGTTTTTGGGTCTATTTATTGTTTGATTCAAATCATTCACCCAGTCCATAGGCTTAATTAGTATTCGTTGAGTTTTGCTGGAAGCTCTCTTTTTTTGGAGACTAAATTAATTTTTGTTTTTTATTATATGGAACGGAGATGTTGTATGGAACCAAGTGCTGGGCGGTTAAGAACCAACATGAGAATAAAGTAAGCCTAGCGGAGATGAGGATGTTGCGTTGGATGTGTGGCAAGACTAGATGAGATAAGATTAGAAACGACGCATTAGAGAGAAGACCTGTAGATTCTGTAGTAGGAGAGTAGATCAGATGGAGGATAGTCAGATTACAAGAGGTAGAGAAAGACCTAGAAAAACTATAAGAGAAACTATTAGGAAAGATTTAGAGATTAATAAGTTGGATCCAAATATAGTTTATAATAGAACCTTATGGCGTAATTTGATCCATGTAGCCGACCGCACTTAGTGGGGTAAGGCTTGGTTGTTGTTTTTGTTGTATGCCCTAAATTTGGAAATGATCTCTAAACAATAGAAAAAAGGAAAATAGATAAGTTTCAAATTAGAAAGGACTGTTACTTAGGCATGTTCAGACTGAAAGAAAATTTCTCTTGGTACTACAAAAGAAAATGCTAGAGAAGTCCTTCTAGTATAGTCAATGTATGTACAATATTTTGAAGCTCAATCCCATATAAATTTTTGTCTATTTTTAGGAGAAAATCTATAATTTTTTGGATAAAAATCCTTTTAGTATTATGATTTTAAGCCATTTTTTCTCTACAGGTCCTGAACAAGTGACTTGTTTAACTTATATATATGTGATCGATTTTGATGATGTCTAAAAGGCCAGGTGTGATAAGACATTAAGTCTTACTTCACTTGTGACAGTTTATTATAGAAATATGCTTTTTGTGTCACTTAGAATGAATTTGGCAGTTGCAAAATCATATGTTTTTCATTATGATCTCCATTTATAAGCATTTATGTTTTCATACGCGTGCGCGCACACACACAAACATGATTACAGAAGGCAAGAATTAGTTTTGGTCCGTAGATTTTTCCACCCACCCCACCCATGATTTCCTTTGAAGCCGGACATAGCAGTTTTTAAGTTCTTTTCATTACTCTACGTATACATTGTGTGTGTGTGTTGTGTGTTTAGGAAATTTTGGTTTATGTTATTCTCAACTTTTTGTTGGGTGTTGTTTAATTTGTGTTTCGTTGATGCAGGTTAAAGAGAGTTTAAGAGATGACCCGAGATATAAATCTGTGAAACATGAGGATAGGGAATTATTGTTCAATGAGTATATTTCCGAGTTGAAAGCTGTTGAACATGCAGCAGAACGAGAGACCAGAGCTAAAAGGGAGGAGCAGGTACTAGGTGGTTAATACTTAATATGTGATGGTTGTCTTTTAAATAAACATAAAGTTGGTAAATTGAAGAAAGTCTGAAAGAATAACTGTCATTCACTTTTTTGTTTATTGATGCCTTGGCATGATGCTCCTGTTAGTCCCTAGCAGGTAAATGATGTTAAACTACCCATATACAATTTTTGGTTAAATATAAGCTTAGTTTATTAAAGTGATTTTTATGATGATTTTTGGCTAAATGGTCTCAGTGGCGTCTCTTTTATTGATGAGTTTTCTGTTTTATGTCGGATGGTGTTGTTTAAGTTGATTTATCAATTTACTTATTCTTAACAGATGTTCCCTTAGCAGCTTATTTTTAGTAACTTAGTATAAAATTGATTATGATCAAATTCAAATACTCTAAACTGGTTCGCAGGACAAGCTGCGGGAGAGGGAGCGAGAGCTGCGTAAAAGGAAGGAAAGAGAAGAACATGAAATGGAAAGGGTACGACTAAAAATTCGTAGGAAGGAGGCAGTTACTTCTTTTCAAGCTTTACTTGTGGAGAGAATCAAAGACCCTATGGTAAAGCTTTTGTTCTTTGTGGTACTTCTACAATTTTGAAAATTAATTTTCCTTGTCAAATCTGAAAGTATTAGAATCTCTTTTACTTATTGTAGTTTTATAAAATTTCATTTTTGTTTCTTAAGTATCGATACTGTTCCAGCCTTTTCTTCTTGACTCCAATTTAATGTAATTTACTTCCTTCTTGAATAATAATTTGTGGTACTTACTTTTACTGTTTTGAAGATTAATTTCCTTGTCAAAATCTAAAAGGATTATAATCTCTCTTAGTTACTGTAGTTTATAAAATTTCATTTTTTGTATCTTGAGTATTGTTATTTTTCCAGCTTTCTCTTCTGAGTTTTAATTTAACGTAATTCACTTTCTTCTTGATTAGGACTAAACTGCATCCAGTTAGACATTAAGAGGATTAAATTGAACATTAAAGAAACTAGATGAATGGAATTGAGTTTCTTAGACTTTTTTGTTTTTGTTTTTTGACTGAGAGTTTCTTAGACTTAAATGCTGGATTGTGCTAGGAATTTTTTTGTTTATAATGATAAATTTCATATATATTTTTCATTAAAGATAAATTAATGTCGTTTGCATATATTCTTAGGCATCATGGACAGAATCGAAGCCTAAACTAGAAAAAGATCCTCAAGGGCGTGCAACCAATTCTGATCTTGATTCAGCTGACATGGAAAAACTCTTCCGGGATCATGTAAAGATGCTTCAGGAAGTAAGTGATAATATCTTATCCCAGTGATATTTGTGACATTTCTCTCTTATATTTTTGCCTGTGATTATTATCTATGTATTGTGTATATTTATTCTTTATTGATTTGAGTCACGGTGTGCCACTTAAATGGGATGCGGGAGACTCGGTAACAGCATGAGTAGAATTACATTTTTGGTCAAATTATGTGCTACTAACATCTGTGACTCCTGTGATTGGCCAGCGTCGTGCTCGCGATTTTAGAGCTCTTCTAGCTGAATTCTTGACTTCTGAAGCCGCGTCTCAGGAAACTGACGATGGGAAAACAGTGCTTAATTCATGGTCTACAGCAAAGCGTCTTATAAAATCTGATCCAAGATATAACAAGGTTCCAAGTGAAGATAGAGAAGCCTTGTGGCGCCGGTATGCAGAGGATATGATTCGGCGGCAAAAATCATCTCATGATTCAAAGGAAGAAAAACATACAGATGCCAGAGGTAGAAAGTCTCTAGAGTCTTCCAAACATCCATTGGAATCAGGGAGATCGCATGAGAGAAGATAA
Protein sequence

>MS.gene003478.t1

MAQPPPSAAETTPTSIPNPSSSSSTPASSPAPSISYAAQQNVNASGNSQQQPSHSGMNPNSAVNPPIPAQPPFHTHPPRPAAPSFSYNFPQSAPPAFTANQHRQSNTNMPDSATQDFSKVSSASSNLHPVPAPTSISAMPPCSDPNYRPTTLWMPTAPTFPVHPVMPGTPSTPGPPGLAKPVILPSNPAAPSTSTGFPSAAVPRQNMPTASDPNASHRGLPYPPIPSMVAPPQGYWLQPPQMSGVHRPPFHQYPAAFPGPFSFPARGGALPAVPVPDSQPPGVTPVGAASISAPAASSHLLRGTSGVQTEVISAHTDDKHKSNATVTQNEDAANDQLDAWTAHKTEAGIVYYYNALTGQSTYDKPAGFKGEAHQVAVQPTPVSMVDLPGTDWQLVSTSDGKKYYYNNRTKTSCWQIPNEVAELKKKQDSDVTKDHPTPVPNTTVLSERGSGMVTLNAPAITTGGRDAVASKPSIVQSSPSALDLIKKKLQESGAPVTSSSIPTPSVQPGSESNGSKATDSTAKSLQNDNSKDKQKDANGDANVSDTSSDSEDEDSGPSKEECINQFKEMLKERGVAPFSKWEKELPKIVFDPRFKAIPSYSARRSLFEHYVKNRAEEERKEKRAAQKAAIEGFKQLLDEASEDIDDKTDYHTFRKKWGNDSRFEALDRKEREHLLNERVLPLKKATEEKAQAIRDAAADSFKSMLKEQGEITFNSRWSRVKESLRDDPRYKSVKHEDRELLFNEYISELKAVEHAAERETRAKREEQDKLRERERELRKRKEREEHEMERVRLKIRRKEAVTSFQALLVERIKDPMASWTESKPKLEKDPQGRATNSDLDSADMEKLFRDHVKMLQERRARDFRALLAEFLTSEAASQETDDGKTVLNSWSTAKRLIKSDPRYNKVPSEDREALWRRYAEDMIRRQKSSHDSKEEKHTDARGRKSLESSKHPLESGRSHERR