AlfalfaGEDB | MS.gene06946

M. sativa cultivar XinJiangDaYe / MS.gene06946

KEGG: K12827
GO: GO:0003674 GO:0003676 GO:0005488 GO:0005575 GO:0005634 GO:0008270 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0046872 GO:0046914 GO:0097159 GO:0110165 GO:1901363
PFAM: PF11931.11 PF12108.11 PF13297.9 PF16837.8

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene06946.t1	XP_003602225.1	96.5	508	18	0	1	508	1	508	4.40E-274	953.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene06946.t1	Q9FG01	71.9	509	137	2	1	508	1	504	4.3e-214	745.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene06946.t1	G7J6U4	96.5	508	18	0	1	508	1	508	3.1e-274	953.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049142	MS.gene06946	0.809961	1.46E-50	-1.69E-46
MS.gene049368	MS.gene06946	0.820655	6.11E-53	-1.69E-46
MS.gene049807	MS.gene06946	0.801944	7.09E-49	-1.69E-46
MS.gene050084	MS.gene06946	0.891733	3.03E-74	-1.69E-46
MS.gene050085	MS.gene06946	0.907264	6.12E-81	-1.69E-46
MS.gene050116	MS.gene06946	0.805379	1.37E-49	-1.69E-46
MS.gene050359	MS.gene06946	0.849161	3.86E-60	-1.69E-46
MS.gene050384	MS.gene06946	0.804869	1.76E-49	-1.69E-46
MS.gene050386	MS.gene06946	0.822039	2.93E-53	-1.69E-46
MS.gene050551	MS.gene06946	0.860504	1.97E-63	-1.69E-46
MS.gene050646	MS.gene06946	0.841805	3.80E-58	-1.69E-46
MS.gene050654	MS.gene06946	0.837159	6.13E-57	-1.69E-46
MS.gene050689	MS.gene06946	0.840709	7.39E-58	-1.69E-46
MS.gene050838	MS.gene06946	0.845559	3.77E-59	-1.69E-46
MS.gene050931	MS.gene06946	0.8195	1.12E-52	-1.69E-46
MS.gene051003	MS.gene06946	0.840568	8.04E-58	-1.69E-46
MS.gene051102	MS.gene06946	0.817202	3.73E-52	-1.69E-46
MS.gene051234	MS.gene06946	0.826141	3.19E-54	-1.69E-46
MS.gene051343	MS.gene06946	0.824031	1.01E-53	-1.69E-46
MS.gene051381	MS.gene06946	0.86521	6.96E-65	-1.69E-46
MS.gene051382	MS.gene06946	0.837905	3.94E-57	-1.69E-46
MS.gene051642	MS.gene06946	0.821854	3.24E-53	-1.69E-46
MS.gene051856	MS.gene06946	0.806833	6.79E-50	-1.69E-46
MS.gene051975	MS.gene06946	0.804083	2.56E-49	-1.69E-46
MS.gene052072	MS.gene06946	0.83796	3.82E-57	-1.69E-46
MS.gene052242	MS.gene06946	-0.830831	2.35E-55	-1.69E-46
MS.gene052307	MS.gene06946	0.861481	9.95E-64	-1.69E-46
MS.gene052342	MS.gene06946	0.821122	4.78E-53	-1.69E-46
MS.gene052397	MS.gene06946	0.836389	9.63E-57	-1.69E-46
MS.gene052514	MS.gene06946	0.810456	1.14E-50	-1.69E-46
MS.gene052516	MS.gene06946	0.803162	3.98E-49	-1.69E-46
MS.gene052609	MS.gene06946	0.873142	1.85E-67	-1.69E-46
MS.gene052776	MS.gene06946	0.817147	3.83E-52	-1.69E-46
MS.gene052932	MS.gene06946	0.807024	6.19E-50	-1.69E-46
MS.gene053058	MS.gene06946	0.833297	5.78E-56	-1.69E-46
MS.gene053079	MS.gene06946	0.823161	1.61E-53	-1.69E-46
MS.gene053143	MS.gene06946	0.86403	1.63E-64	-1.69E-46
MS.gene05315	MS.gene06946	0.808929	2.43E-50	-1.69E-46
MS.gene055311	MS.gene06946	0.819177	1.33E-52	-1.69E-46
MS.gene055313	MS.gene06946	0.807164	5.78E-50	-1.69E-46
MS.gene055424	MS.gene06946	0.812452	4.21E-51	-1.69E-46
MS.gene055469	MS.gene06946	0.824157	9.40E-54	-1.69E-46
MS.gene055513	MS.gene06946	0.818429	1.97E-52	-1.69E-46
MS.gene056045	MS.gene06946	0.817806	2.72E-52	-1.69E-46
MS.gene056097	MS.gene06946	0.838994	2.07E-57	-1.69E-46
MS.gene056181	MS.gene06946	0.868204	7.77E-66	-1.69E-46
MS.gene056507	MS.gene06946	0.82747	1.54E-54	-1.69E-46
MS.gene056787	MS.gene06946	0.822563	2.22E-53	-1.69E-46
MS.gene057131	MS.gene06946	0.810094	1.37E-50	-1.69E-46
MS.gene05781	MS.gene06946	0.817391	3.38E-52	-1.69E-46
MS.gene057890	MS.gene06946	-0.807714	4.42E-50	-1.69E-46
MS.gene058054	MS.gene06946	0.847466	1.14E-59	-1.69E-46
MS.gene058055	MS.gene06946	0.82127	4.41E-53	-1.69E-46
MS.gene058261	MS.gene06946	0.806536	7.84E-50	-1.69E-46
MS.gene058292	MS.gene06946	0.83698	6.81E-57	-1.69E-46
MS.gene058330	MS.gene06946	0.806082	9.78E-50	-1.69E-46
MS.gene058638	MS.gene06946	0.821631	3.64E-53	-1.69E-46
MS.gene058639	MS.gene06946	0.81673	4.76E-52	-1.69E-46
MS.gene058758	MS.gene06946	0.800059	1.72E-48	-1.69E-46
MS.gene059007	MS.gene06946	0.872179	3.88E-67	-1.69E-46
MS.gene059146	MS.gene06946	0.840632	7.74E-58	-1.69E-46
MS.gene059170	MS.gene06946	0.819772	9.74E-53	-1.69E-46
MS.gene059171	MS.gene06946	0.822767	1.99E-53	-1.69E-46
MS.gene05978	MS.gene06946	0.81417	1.77E-51	-1.69E-46
MS.gene060296	MS.gene06946	0.817695	2.89E-52	-1.69E-46
MS.gene060343	MS.gene06946	-0.80371	3.06E-49	-1.69E-46
MS.gene060763	MS.gene06946	0.808841	2.54E-50	-1.69E-46
MS.gene060933	MS.gene06946	0.817748	2.81E-52	-1.69E-46
MS.gene060937	MS.gene06946	0.802925	4.45E-49	-1.69E-46
MS.gene061006	MS.gene06946	0.876033	1.93E-68	-1.69E-46
MS.gene061100	MS.gene06946	0.850616	1.51E-60	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene06946	MS.gene89818	PPI
MS.gene62648	MS.gene06946	PPI
MS.gene068867	MS.gene06946	PPI
MS.gene06946	MS.gene040175	PPI
MS.gene06946	MS.gene75072	PPI
MS.gene06946	MS.gene074369	PPI
MS.gene06946	MS.gene53517	PPI
MS.gene009724	MS.gene06946	PPI
MS.gene06946	MS.gene053443	PPI
MS.gene06946	MS.gene66321	PPI
MS.gene06946	MS.gene020229	PPI
MS.gene06946	MS.gene56983	PPI
MS.gene06946	MS.gene29719	PPI
MS.gene06946	MS.gene60357	PPI
MS.gene006800	MS.gene06946	PPI
MS.gene06946	MS.gene70613	PPI
MS.gene06946	MS.gene032681	PPI
MS.gene06946	MS.gene015612	PPI
MS.gene06946	MS.gene56924	PPI
MS.gene06946	MS.gene39316	PPI
MS.gene51111	MS.gene06946	PPI
MS.gene06946	MS.gene70292	PPI
MS.gene06946	MS.gene072740	PPI
MS.gene068781	MS.gene06946	PPI
MS.gene89294	MS.gene06946	PPI
MS.gene06946	MS.gene47127	PPI
MS.gene06946	MS.gene82776	PPI
MS.gene06946	MS.gene073888	PPI
MS.gene26309	MS.gene06946	PPI
MS.gene06946	MS.gene030697	PPI
MS.gene06946	MS.gene48389	PPI
MS.gene06946	MS.gene96780	PPI
MS.gene06946	MS.gene055184	PPI
MS.gene06946	MS.gene59609	PPI
MS.gene06946	MS.gene035725	PPI
MS.gene063407	MS.gene06946	PPI
MS.gene24692	MS.gene06946	PPI
MS.gene06946	MS.gene94183	PPI
MS.gene06946	MS.gene55490	PPI
MS.gene06946	MS.gene040615	PPI
MS.gene06946	MS.gene039147	PPI
MS.gene06946	MS.gene58148	PPI
MS.gene06946	MS.gene055186	PPI
MS.gene06946	MS.gene012386	PPI
MS.gene06946	MS.gene79721	PPI
MS.gene95860	MS.gene06946	PPI
MS.gene06946	MS.gene89820	PPI
MS.gene06946	MS.gene065189	PPI
MS.gene06946	MS.gene022734	PPI
MS.gene06946	MS.gene070248	PPI
MS.gene06946	MS.gene83565	PPI
MS.gene06946	MS.gene018076	PPI
MS.gene06946	MS.gene98171	PPI
MS.gene06946	MS.gene99709	PPI
MS.gene06946	MS.gene067444	PPI
MS.gene06946	MS.gene031406	PPI
MS.gene06946	MS.gene074107	PPI
MS.gene06946	MS.gene25942	PPI
MS.gene06946	MS.gene033232	PPI
MS.gene06946	MS.gene04711	PPI
MS.gene06946	MS.gene56525	PPI
MS.gene06946	MS.gene022283	PPI
MS.gene06946	MS.gene069779	PPI
MS.gene06946	MS.gene89296	PPI
MS.gene053099	MS.gene06946	PPI
MS.gene06946	MS.gene85931	PPI
MS.gene06946	MS.gene86968	PPI
MS.gene06946	MS.gene92142	PPI
MS.gene06946	MS.gene22321	PPI
MS.gene059846	MS.gene06946	PPI
MS.gene06946	MS.gene98889	PPI
MS.gene06946	MS.gene67235	PPI
MS.gene06946	MS.gene50211	PPI
MS.gene06946	MS.gene064051	PPI
MS.gene06946	MS.gene009798	PPI
MS.gene06946	MS.gene030285	PPI
MS.gene06946	MS.gene031484	PPI
MS.gene06946	MS.gene28172	PPI
MS.gene06946	MS.gene024669	PPI
MS.gene06946	MS.gene21651	PPI
MS.gene06946	MS.gene062632	PPI
MS.gene06946	MS.gene66329	PPI
MS.gene06946	MS.gene67234	PPI
MS.gene06946	MS.gene007200	PPI
MS.gene06946	MS.gene050303	PPI
MS.gene06946	MS.gene46089	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene06946.t1	MTR_3g091250	96.457	508	18	0	1	508	1	508	0.0	1023
MS.gene06946.t1	MTR_3g091250	96.444	450	16	0	59	508	7	456	0.0	910

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene06946.t1	AT5G06160	73.674	509	128	2	1	508	1	504	0.0	743

Find 118 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTTACCTCCTTTAACCTTTC+AGG	0.130390	3.1:-73199635	None:intergenic
ATCACACAGTTTATTCATTT+TGG	0.141003	3.1:-73201331	None:intergenic
TTTAAAAGAAATTGCATTAA+TGG	0.158382	3.1:+73201305	MS.gene06946:CDS
CTTCGATTTCCTCGTATGTT+AGG	0.196582	3.1:-73201539	None:intergenic
CAACTGAGTTCGATGAAAAT+TGG	0.228110	3.1:+73199492	MS.gene06946:CDS
TCGTTGAAGTTCTTTGTATT+TGG	0.231113	3.1:-73203569	None:intergenic
TGTTGGAAGTTGGTTCATTC+TGG	0.242281	3.1:-73196975	None:intergenic
TATGCGGGAACTATAGTTAT+TGG	0.255362	3.1:+73203477	MS.gene06946:CDS
ATCTAGGCACTTGCTGCATT+GGG	0.294288	3.1:+73200462	MS.gene06946:intron
CAGCACAGTTGAAGAGCTTA+TGG	0.302002	3.1:+73199604	MS.gene06946:CDS
TCATACTCTTCCTCTAGGTC+TGG	0.329443	3.1:-73204494	None:intergenic
CAGTATGTCAATTCTAAGTT+TGG	0.342388	3.1:+73198064	MS.gene06946:CDS
ATGCGGGAACTATAGTTATT+GGG	0.353408	3.1:+73203478	MS.gene06946:CDS
TGGGCTACTGGAAGGGTATT+GGG	0.359820	3.1:+73199512	MS.gene06946:CDS
TTGGGCTACTGGAAGGGTAT+TGG	0.366406	3.1:+73199511	MS.gene06946:CDS
CATCTAGGCACTTGCTGCAT+TGG	0.370534	3.1:+73200461	MS.gene06946:intron
CATTGATTCCAGTAGCAGTT+TGG	0.372960	3.1:-73197202	None:intergenic
CTTAAAATTACCAATGGGTT+GGG	0.382342	3.1:+73203054	MS.gene06946:CDS
ATGGGAAGCCTATACCTTAC+TGG	0.385559	3.1:+73203077	MS.gene06946:CDS
GCTGTATAAGCTACATGGTC+TGG	0.393993	3.1:+73203099	MS.gene06946:CDS
AGTGGGTCCTGAAAGGTTAA+AGG	0.394686	3.1:+73199628	MS.gene06946:CDS
GGTGTACCTGAATAGTCTTT+TGG	0.402619	3.1:+73198279	MS.gene06946:CDS
CAGCCCCTGGCGTTGTAAAT+CGG	0.404084	3.1:-73204555	None:intergenic
TGCAGGAAGCAAAAGAGCTT+TGG	0.404374	3.1:+73204432	MS.gene06946:intron
GATACTCCAAAAGACTATTC+AGG	0.407884	3.1:-73198285	None:intergenic
TTCAATTCTACAGGCAGTAC+AGG	0.408760	3.1:+73198257	MS.gene06946:intron
TGTATCAGAGTCACCGTGTT+CGG	0.411672	3.1:+73197007	MS.gene06946:CDS
CTCTTTGAGTCTATCATAGA+AGG	0.414347	3.1:-73197234	None:intergenic
CTGATACAAACGGTCCTTGT+TGG	0.416952	3.1:-73196992	None:intergenic
TTCGATTTCCTCGTATGTTA+GGG	0.417088	3.1:-73201538	None:intergenic
AACTGAGTTCGATGAAAATT+GGG	0.421192	3.1:+73199493	MS.gene06946:CDS
TTCGATGAAAATTGGGCTAC+TGG	0.424132	3.1:+73199500	MS.gene06946:CDS
TTATACAGCCAGTAAGGTAT+AGG	0.426162	3.1:-73203085	None:intergenic
CTTGGTGGCCAAACTGCTAC+TGG	0.431424	3.1:+73197194	MS.gene06946:CDS
TGTCTTCATACTCTTCCTCT+AGG	0.433753	3.1:-73204499	None:intergenic
GCGTCAACAACACGTGCAGC+TGG	0.446491	3.1:-73197517	None:intergenic
TGTAGATACGAGAGTATCAT+AGG	0.463065	3.1:+73197488	MS.gene06946:intron
TCAATTGCAGTGTGCTGAGC+AGG	0.463086	3.1:-73199569	None:intergenic
CCTTAAAATTACCAATGGGT+TGG	0.464629	3.1:+73203053	MS.gene06946:CDS
AGATTCTATCAAGATCTTGC+AGG	0.470792	3.1:-73198336	None:intergenic
CATACTCTTCCTCTAGGTCT+GGG	0.473195	3.1:-73204493	None:intergenic
TACTGGAAGGGTATTGGGAT+GGG	0.483346	3.1:+73199517	MS.gene06946:CDS
CAACGAAATTACGTCAATTG+AGG	0.486863	3.1:+73203586	MS.gene06946:CDS
CTGTATAAGCTACATGGTCT+GGG	0.495612	3.1:+73203100	MS.gene06946:CDS
GCACACACCTCTTGAAATGC+TGG	0.495845	3.1:+73201209	MS.gene06946:intron
AATCCCTTAAAATTACCAAT+GGG	0.496531	3.1:+73203049	MS.gene06946:CDS
ATGAAAATTGGGCTACTGGA+AGG	0.496968	3.1:+73199504	MS.gene06946:CDS
TAATCCCTTAAAATTACCAA+TGG	0.498551	3.1:+73203048	MS.gene06946:CDS
GCTGCATTGGGACTGAAGAC+TGG	0.498905	3.1:+73200474	MS.gene06946:CDS
AATTTAAGTGCGAGATATGC+GGG	0.502127	3.1:+73203462	MS.gene06946:CDS
TAAGCTACATGGTCTGGGTC+AGG	0.506287	3.1:+73203105	MS.gene06946:CDS
GATTCTATCAAGATCTTGCA+GGG	0.507050	3.1:-73198335	None:intergenic
GGGATGGGAGAATGTCAATC+AGG	0.507812	3.1:+73199532	MS.gene06946:CDS
AAATTACCAATGGGTTGGGA+TGG	0.508367	3.1:+73203058	MS.gene06946:CDS
TCGAGCAGCACACGAGGAAG+TGG	0.508472	3.1:+73196921	MS.gene06946:CDS
AGTTGAAGAGCTTATGGAAG+TGG	0.508524	3.1:+73199610	MS.gene06946:CDS
AATTACCAATGGGTTGGGAT+GGG	0.509217	3.1:+73203059	MS.gene06946:CDS
CAACATGGGATGCGATGCCT+TGG	0.512114	3.1:+73203542	MS.gene06946:CDS
AGGTATGCAGAATACTCAAT+TGG	0.515419	3.1:-73198091	None:intergenic
ACTACTATCACTTCCACCAC+TGG	0.521216	3.1:+73197039	MS.gene06946:CDS
AAACGGTCCTTGTTGGAAGT+TGG	0.522332	3.1:-73196985	None:intergenic
TGTAGCTTATACAGCCAGTA+AGG	0.523342	3.1:-73203091	None:intergenic
GAGAATGTCAATCAGGAGAA+TGG	0.526978	3.1:+73199539	MS.gene06946:CDS
ATATACCGATTTACAACGCC+AGG	0.529015	3.1:+73204550	MS.gene06946:CDS
ACACGAGGAAGTGGAGCGAT+TGG	0.537478	3.1:+73196930	MS.gene06946:CDS
TGATAAAGATAATGCAAGGA+AGG	0.542251	3.1:+73197157	MS.gene06946:CDS
AGGAAGTGGAGCGATTGGAG+AGG	0.543007	3.1:+73196935	MS.gene06946:CDS
CTTGCAGGGGTTCTGTCCGA+TGG	0.546665	3.1:-73198321	None:intergenic
GATGAGATTGCTGCACTTGG+TGG	0.547147	3.1:+73197179	MS.gene06946:CDS
GAAGAGTATGAAGACAAAGA+AGG	0.547972	3.1:+73204506	MS.gene06946:CDS
TCTCCGCTAAACTCAATTCG+AGG	0.550547	3.1:-73197574	None:intergenic
GGAAGTGGAGCGATTGGAGA+GGG	0.550888	3.1:+73196936	MS.gene06946:CDS
AAAGAATGGCGTCATCAACA+TGG	0.552884	3.1:+73203527	MS.gene06946:CDS
AAAAGAAATTGCATTAATGG+AGG	0.560517	3.1:+73201308	MS.gene06946:CDS
GGCTTCCCATCCCAACCCAT+TGG	0.562951	3.1:-73203064	None:intergenic
CTTCTATGATAGACTCAAAG+AGG	0.564031	3.1:+73197235	MS.gene06946:CDS
TGAAAATTGGGCTACTGGAA+GGG	0.568639	3.1:+73199505	MS.gene06946:CDS
TGCGGGAACTATAGTTATTG+GGG	0.570663	3.1:+73203479	MS.gene06946:CDS
CACGGTGACTCTGATACAAA+CGG	0.571196	3.1:-73197002	None:intergenic
ACTTAGAATTGACATACTGC+TGG	0.576248	3.1:-73198060	None:intergenic
AAGGATGAGATTGCTGCACT+TGG	0.576506	3.1:+73197176	MS.gene06946:CDS
TTATGGAAGTGGGTCCTGAA+AGG	0.577854	3.1:+73199621	MS.gene06946:CDS
GAATTTAAGTGCGAGATATG+CGG	0.584834	3.1:+73203461	MS.gene06946:CDS
CGTCAACAACACGTGCAGCT+GGG	0.591543	3.1:-73197516	None:intergenic
GAACCTCGAATTGAGTTTAG+CGG	0.593969	3.1:+73197571	MS.gene06946:CDS
CGCGCAAAATGAAAACAACC+AGG	0.595239	3.1:+73198143	MS.gene06946:CDS
CTACTGGAAGGGTATTGGGA+TGG	0.595365	3.1:+73199516	MS.gene06946:CDS
TCTTACAAGTCGTCCAGTGG+TGG	0.600104	3.1:-73197052	None:intergenic
TACTGGCTGTATAAGCTACA+TGG	0.603636	3.1:+73203094	MS.gene06946:CDS
TTCTTGTCCAGCATTTCAAG+AGG	0.604903	3.1:-73201216	None:intergenic
AGCAACTCGAGCAGCACACG+AGG	0.609582	3.1:+73196915	MS.gene06946:CDS
TCTTTGTATTTGGTATACCA+AGG	0.611780	3.1:-73203559	None:intergenic
AGAGACAAGGAGTGAACAAG+TGG	0.612327	3.1:+73204468	MS.gene06946:CDS
ATGATGATAAAGATAATGCA+AGG	0.615572	3.1:+73197153	MS.gene06946:CDS
TCAATTCTACAGGCAGTACA+GGG	0.619788	3.1:+73198258	MS.gene06946:intron
ATTGGAGAGGGTAATAGTGA+AGG	0.622961	3.1:+73196948	MS.gene06946:CDS
AAGAATGGCGTCATCAACAT+GGG	0.625608	3.1:+73203528	MS.gene06946:CDS
AATCGAAGCAGAACGTGAGG+AGG	0.626396	3.1:+73201554	MS.gene06946:CDS
GTTGAAGAGCTTATGGAAGT+GGG	0.627195	3.1:+73199611	MS.gene06946:CDS
AAGAAGATACAGCAGAGACA+AGG	0.630262	3.1:+73204455	MS.gene06946:CDS
GTAGCTGCTGCTCCACAACA+TGG	0.632223	3.1:+73201279	MS.gene06946:CDS
GGAAATCGAAGCAGAACGTG+AGG	0.636554	3.1:+73201551	MS.gene06946:CDS
GAATGAACCAACTTCCAACA+AGG	0.648324	3.1:+73196978	MS.gene06946:CDS
GAATCTTACAAGTCGTCCAG+TGG	0.655081	3.1:-73197055	None:intergenic
ACTGTGTGATTTGTTAGACG+AGG	0.661277	3.1:+73201344	MS.gene06946:CDS
TCGAATTGAGTTTAGCGGAG+AGG	0.670960	3.1:+73197576	MS.gene06946:CDS
CAAGTGGCGCCCAGACCTAG+AGG	0.671153	3.1:+73204484	MS.gene06946:CDS
GCATTGGGACTGAAGACTGG+TGG	0.671657	3.1:+73200477	MS.gene06946:CDS
AGAGAGGCTCTTCCTCACAA+AGG	0.683965	3.1:+73200518	MS.gene06946:CDS
CTGTTCAGCAACGTGCAGAG+AGG	0.688046	3.1:+73200502	MS.gene06946:CDS
TAGTAATCATATTCCGAACA+CGG	0.688533	3.1:-73197020	None:intergenic
ATTCTATCAAGATCTTGCAG+GGG	0.691153	3.1:-73198334	None:intergenic
GGGTCCTGAAAGGTTAAAGG+AGG	0.691274	3.1:+73199631	MS.gene06946:CDS
ATTGCAGGAAGAGACTCAAG+AGG	0.696019	3.1:+73202991	MS.gene06946:intron
TATACCGATTTACAACGCCA+GGG	0.704758	3.1:+73204551	MS.gene06946:CDS
GCGGGAACTATAGTTATTGG+GGG	0.717346	3.1:+73203480	MS.gene06946:CDS
GAAGCAAGCCCTAACATACG+AGG	0.718372	3.1:+73201530	MS.gene06946:CDS
ATACCGATTTACAACGCCAG+GGG	0.730189	3.1:+73204552	MS.gene06946:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
chr3.1	gene	73196895	73204583	73196895	ID=MS.gene06946
chr3.1	mRNA	73196895	73204583	73196895	ID=MS.gene06946.t1;Parent=MS.gene06946
chr3.1	exon	73196895	73197068	73196895	ID=MS.gene06946.t1.exon1;Parent=MS.gene06946.t1
chr3.1	CDS	73196895	73197068	73196895	ID=cds.MS.gene06946.t1;Parent=MS.gene06946.t1
chr3.1	exon	73197143	73197256	73197143	ID=MS.gene06946.t1.exon2;Parent=MS.gene06946.t1
chr3.1	CDS	73197143	73197256	73197143	ID=cds.MS.gene06946.t1;Parent=MS.gene06946.t1
chr3.1	exon	73197493	73197597	73197493	ID=MS.gene06946.t1.exon3;Parent=MS.gene06946.t1
chr3.1	CDS	73197493	73197597	73197493	ID=cds.MS.gene06946.t1;Parent=MS.gene06946.t1
chr3.1	exon	73198022	73198164	73198022	ID=MS.gene06946.t1.exon4;Parent=MS.gene06946.t1
chr3.1	CDS	73198022	73198164	73198022	ID=cds.MS.gene06946.t1;Parent=MS.gene06946.t1
chr3.1	exon	73198270	73198366	73198270	ID=MS.gene06946.t1.exon5;Parent=MS.gene06946.t1
chr3.1	CDS	73198270	73198366	73198270	ID=cds.MS.gene06946.t1;Parent=MS.gene06946.t1
chr3.1	exon	73199488	73199652	73199488	ID=MS.gene06946.t1.exon6;Parent=MS.gene06946.t1
chr3.1	CDS	73199488	73199652	73199488	ID=cds.MS.gene06946.t1;Parent=MS.gene06946.t1
chr3.1	exon	73200468	73200539	73200468	ID=MS.gene06946.t1.exon7;Parent=MS.gene06946.t1
chr3.1	CDS	73200468	73200539	73200468	ID=cds.MS.gene06946.t1;Parent=MS.gene06946.t1
chr3.1	exon	73201210	73201365	73201210	ID=MS.gene06946.t1.exon8;Parent=MS.gene06946.t1
chr3.1	CDS	73201210	73201365	73201210	ID=cds.MS.gene06946.t1;Parent=MS.gene06946.t1
chr3.1	exon	73201498	73201575	73201498	ID=MS.gene06946.t1.exon9;Parent=MS.gene06946.t1
chr3.1	CDS	73201498	73201575	73201498	ID=cds.MS.gene06946.t1;Parent=MS.gene06946.t1
chr3.1	exon	73202998	73203126	73202998	ID=MS.gene06946.t1.exon10;Parent=MS.gene06946.t1
chr3.1	CDS	73202998	73203126	73202998	ID=cds.MS.gene06946.t1;Parent=MS.gene06946.t1
chr3.1	exon	73203461	73203607	73203461	ID=MS.gene06946.t1.exon11;Parent=MS.gene06946.t1
chr3.1	CDS	73203461	73203607	73203461	ID=cds.MS.gene06946.t1;Parent=MS.gene06946.t1
chr3.1	exon	73204437	73204583	73204437	ID=MS.gene06946.t1.exon12;Parent=MS.gene06946.t1
chr3.1	CDS	73204437	73204583	73204437	ID=cds.MS.gene06946.t1;Parent=MS.gene06946.t1

Gene Sequence

>MS.gene06946

ATGTCTTCAACGTTGCTAGAAGCAACTCGAGCAGCACACGAGGAAGTGGAGCGATTGGAGAGGGTAATAGTGAAGGATCTCCAGAATGAACCAACTTCCAACAAGGACCGTTTGTATCAGAGTCACCGTGTTCGGAATATGATTACTACTATCACTTCCACCACTGGACGACTTGTAAGATTCCATCTTTATTATATTAGGGTTTATCGTTTTCTATCGTAATTCGTAACACGTTTCTTTGTTTTCAGATTGAGATATATGATGATAAAGATAATGCAAGGAAGGATGAGATTGCTGCACTTGGTGGCCAAACTGCTACTGGAATCAATGTTTTTAGTGCCTTCTATGATAGACTCAAAGAGGTTAGTTAGCTTTTACTCTTTTTCAATTTCAATTTTCATTCTCCTTATTATTATTATTATTATTTTAGGTTTAAGAGGTTAAATTTCAAAATTGTTGCGGTTTTTAAGTGGAAAACAACTTTAATATTGGACTTTAGGTTATATAATTGGATTTGGTGGAAATGAGTTCTTGCATTTATATGTTTGAATCAATTGCGTGTCGGTAACAGATTTTGGTTATTTTGTGGTATGTGTAGATACGAGAGTATCATAGGAAACACCCAGCTGCACGTGTTGTTGACGCAAATGACGATTTTGAAGATCTTCTTAAAGAGGAACCTCGAATTGAGTTTAGCGGAGAGGTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTTTGTGTGTGTGTGTGTGTGAGTATGAGAAACTGTTGATTGCTCTGGCTGAAATTAGACTTTGCCCTAGGCCCTAGCATGTGTGATGCATGGTTAAATATTGAATTTGGGAATTCTTCATATTTTAAGAATTGCAGTGACAAGTCATTACGGTATTTGGATTCATCTCAAATCTTGCTCGTGCGCATTCGGAATGCAATGAAGAATTTCTTGTCTAAGGGGCCTATTTGTTCCAGAGAAAACATTTACATTGAATATGCATGAAGTCTAAAATATTATACTATTAAGAGAGACAATATCACGTTTACAATACAATTTATGCTACTGCAGTTTTTTCGTGGTCACTGATTATGTGATAACTGTTTTCCAGGAAGCTTTTGGTCGATACTTAGACATGCATGCGTTATACCAGCAGTATGTCAATTCTAAGTTTGGAGAGCCAATTGAGTATTCTGCATACCTTGATATTTTTTCTGAGACAGATAAGATCCCGCGCAAAATGAAAACAACCAGGTGAGTTGCATTCTCTATCTATCTAATATGTTGATCATTTGTCGGCATCCTAGTTTTGTATGGAATATGTACACTATTCTTCTTAATCCTTGTTCAATTCTACAGGCAGTACAGGGTGTACCTGAATAGTCTTTTGGAGTATCTAATATCTTTTTTCCATCGGACAGAACCCCTGCAAGATCTTGATAGAATCTTTTCAAAGGTGATTGATTTTACATTGTTTTGAACTTGTATCTTTTTTAGCATAATTTTAAGTCTCAATTTTCTCTTAGAATGGGATGTTTTGAAAATTTCCCTCCTAGCTCTGAATTTTTTGGTGCAGAAACTTCATGAATCTTTGTTTTAAACAACTTGCATTAGTTTTTTTTTTCTTTCTGAAAGTTGTCTCACTGAAATCCAGTGTTATGTTTGGGCAAACAACTTGCTTATAATTTTTGTCAATGCAGTCAACCATTTTTCTATATTTTTATGTGTTTATAACAAGTTTAACCCATTTTTTATTCCAGTATGATTCCATTTTCATGACACTATATACTGAAGCAAAACAATTATGAACTAAAGGTAAAGAGAAAAAAAGGATACACACCATCAATGTAAACTAGTTTTACACTAACACCCAATAAGAATAGAGTGTGTGGTAGTTATTTTTAAAAGACACTTACCAAACGGGCATACATGACATGATGGGTTCCCATTGGAAGACAATATAAAACTATTTTACACAATCGGTGCATAGCCATTAAACTCAATTAAAACTCCACAGGTGTTTGCGGTCCACATAAATATTGAAAGACTGTGGACGGACCTCCCATCAAAATCTTTCATTTCTCCACAGCTTTGAATGTTATGTGTAACTAATTTTGAGCACTTTATTATTGATTTTAAGACTCTAGAAGATTAAATGCAGTTTTAGATAACCACTTATCAGTTTTGGAACTTCACCCAAAATCTTTAGTTCATCTAGGTACTAATGTCCTATAGTTTTGACAGTAGGGGTCCGGAAAGATATGTTAATGATTTCTGGAATAAAAAAAGTAAAGGAAAAAGTGTCCCTGGAAAGCTTCTTTATTTTAAAGTGGACCGAAGTTAAATGCATATTTCTCTTTTATGGGAGGGAGTGTAGCTTTGTAAATTTTCAACTTTTTTAAAATAAAAATGGAGGGTGCTTTATCATATGCCTTCTCTTGCAGGAGAGAAGGGAACTGTAATTTTCTCCTATTTTAAAGCTTTCTGTGTCAGAAGTGATTGCATTGTTTACCTACTCGTTTTCTTGTGAATTAGTTGCACTTCTCTATTTTCTGGGATCTGATAATGTTGTGGCAGGTAACAACTGAGTTCGATGAAAATTGGGCTACTGGAAGGGTATTGGGATGGGAGAATGTCAATCAGGAGAATGGACATGTACCTGCTCAGCACACTGCAATTGATCTTGATTATTACAGCACAGTTGAAGAGCTTATGGAAGTGGGTCCTGAAAGGTTAAAGGAGGTAAAAAACTAAAAATTGAGGATTGTGTGTGTGAGGATTGAGTATTATAAAATTGAAGATATACACTTACTGGTTTTGTACTTGTACTTAGTTTGCGTGTGTATGTAACAAATACAATTCAAAATATTCGAAAACAATTGGAGTACTCAATTTGGATACATGGGTACGGATTTGGTAAAATAAGGGTGAGAGCAAAATATGGGATATTGGTTGAGATAAATGGGATATCTGAAGTTGTCACTGATGATATTTAAGAAAACGATGTGATTGGTACTGTTTAAGAAAATGATCTGAAGTTGTCACAGATGATATTTAAGAAAATGATGTGATTGGTACTGTTTACTTGTGATATTCATAGCCATGTTTAAGTTTTATATGATGTTGATTGTTGAATAACTTTCATATTGTAGTTTCATTAGGAGGTCTTTTGCTGTCATGTTGAACTGAGTTAAGCTCTTTTTATTATTTTTTTATACATAATGCTTGATTGTGTTTTTCATAATCTTTTATGCAATTTAGATGTTTATATAGAATTTAATTTCCTTATATATGTATATTTTTTAAAATTTATATTAATGCACCCATATTTTAGACTTTTAAGAACTCTATCACTACCATACCCTTATCCATGCAACATTGGTATAGTACAATACAATACAAGGATTTACCCTCCCTTTTTATAAACTTGAAATTCTTTCAATATTCATGAAGTACAAACATTAAGTATCTTTTCTTGCTAGTCATTAATTTTTTTGGAGCTCTATTTATTGATAACTGATTTATTCTTCCGCCTTTTGTCTTGATTTTTCATCTAGGCACTTGCTGCATTGGGACTGAAGACTGGTGGCACTGTTCAGCAACGTGCAGAGAGGCTCTTCCTCACAAAGGTGATTTTTACCCGTTTACCAGGGACATGGTTACACTTTTTTTTTTGCGGTTTTCTTGGTCTTTTCTGTGGACGGAGTAGGAATGTAGGGATTATCTTTGCTGCAGTACCTCAAAACAAGTTCCATAAGAGATGTATTCTCGCCTTTTCCTTCAAAGCTGATTGTCGTAAGCTTAGTCACGAACTGGGATCTCCAGATAGGCTCAAACCGAGAGTTCAAAACTAATTGAAGATGATTTAACTGACTTAAGCCCCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAAAAAAAAGCATAGTTACAATCCCTTGAAAGCCAGGTATTAGATAGATCATTGGGCCTTGAAATATTCTAAAATTTTATATGCTTTCTTGGTTCCTGATCATAAGTACCTACAATTATGAATTTGTTCAGGATATCATTATCTTGTAGGTTTTCAATGCTATGAAAACATTAACTCCTTCAATATTTATGAAGTGATATTTCCACCATATGTTGTAGATCAAAATCAGTTAAACCCTTCACGCCCAATTTTCTATTTGCCTGGAAGATGCCCTGGTTGCCTGAATTTTGATTGAAGTTACTTTTTTTCCTCTAAGCTATGAATGCATAATCTGTCTTTACAGCTCGAGTTAACAAATTTTCTCTCACATTTTTTTTTTTCATGCAGCACACACCTCTTGAAATGCTGGACAAGAAGCATTTTGCCAAGGGGGCGCGTGGTTTAGAAAAAAATGGGGTAGCTGCTGCTCCACAACATGGAAATTTAAAAGAAATTGCATTAATGGAGGCCAAAATGAATAAACTGTGTGATTTGTTAGACGAGGTTAGCAAACGATGCTTCATTATTTCTTTAAGTTTACTTCCTTTGATGATTTGAAATGCAACATTTTGGGCATATAAATTACTTTATCTATAGAAAATTCTTTGGTGTATAATGTTTATCATCTTTCTACAGACAATTACTCGAACAAAAGACAACGTTGTAAAGAAGCAAGCCCTAACATACGAGGAAATCGAAGCAGAACGTGAGGAGGTGAGTTGAAGCAATTTATGAATCCTCTAAATTTTAGGGGACCCATACCATAGTGCATTACTGTGACATTAGTTTTTCACAGCACTGATTCATTTTTTTTGTCAAAGAAATACACTTACCAATTATATTTTATATCTTAGACGGTTGACCATAATACATTAAATGCACTTTACTTGTTTGCTTTTAACATCTGGGGGTTGGCTTTAATGAGGGACTAAGGTGCATGTGCAACGATTGATACTGTCATATGACGTATGCATTGTTTCTAGGTTCAAAACGATCTCCAAGACGCTTTGGTGCACTTCATTGCATCAATCATATTCATAGTTTATCATGGGTGTCCTGTACTTATATTTGAAGGGGATGTAGAACTGGTCTTGTATATATGGCCAACATTATTGAAGTTGATAAATCCTTATTGTAACCAAAATTGTGAGTGTAAATTCATCTATAAAATAGGCTAATGCTTAAGCTATCTATGATGAGGTTGACCTTTTTCATTAACTTATTCTCATATTATTCATGATATGAGTTGCTTTAAATTATCATTGAAGCACACATGATGTTTTGAATTGTATGTGTGCCGTGGGACTTGGCTTATGTGGTGGATGGGGAATATTCGTCCGGAAATGAAATTTGTTCTGAATGCTACCAATGAGACTTGATTACATGCTTTAGATAAAAGGTGTGCAGTTTTGGCTTGAGTATAACTGTGGATCTTTTACTTCTAGTTCTATGTTTCTGGATATCGTATTCTGTTAAAGATTGCATTATCTGATTTCTAGGCTTTGATAAGGAGGGGTAAACATAAGTACGACTTGACCCAACAACAATACCAACAACAACCAAGCCTTACCCTCTAAGTGGGGTTGGCGATCTAATTACGCCATAATGTTCTATCATAAACCAGATTTTGGTTCAACTCATTAATCTCCAAAGTCTTTCCTAATAGTTTCTCTTAAAGTTTTTCTAGGTCTTCCTCTGCCTCTAGTGATCCGACTGTCCTCCACCTGAACGACTTGACCCTGCCACAATTATTTTAGGAGAAAAAGTATTATTCACTGGAGAAGTTATTCTATGGCATTCACTAAAACCACCACCTTGAAAATATGGGTTTGAGAGGAGACAACTGTGGCATCAAATGTTAAGATGCACAAGAATTCAATCCTAGTTGATCGTTCCAAGTCACTATTCACTTTTTTTTTGCCTGTTTTCTTTGAAAAGTTTTCAGACAAATTGAAGCTTTTTTATTGCCATTGTTGTTTCGTGGTCTATATTAACAAGAGAGAAAAATAGTTTCTAGCTTTCATCTGTCCTCCTGATTCGCATAACTCTTCATCTGTTTTTGCCAATTTACTTCTGCTCCTTTCTCTCTCAATTATTGCTTTATTTATAGTACATAATATTAAACATTCATTGCAGGAAGAGACTCAAGAGGACTCTGAAAGCGAAGATGACGAGCAGCAGATTTATAATCCCTTAAAATTACCAATGGGTTGGGATGGGAAGCCTATACCTTACTGGCTGTATAAGCTACATGGTCTGGGTCAGGTATTATTTATTTGCAATTAAAATTTTAGAAATTTGAACTGTTGTTTCTTTTGCTGGATATATCTCAAGGGTTGGTTTTATCATTGTCTATTCACGAGTCTTGACAGTCCCAAAGTGGTGACTTACAAAATTTATCTCTTTACTAGAGGAGCAGATAAAAGCAAAAGGAAAAAAGCTATTAAAAGAAATTGTTGTTATTGTCCGCCTTTGCTTGTTGGCAGTATTGCATTAGATAGTTTCATTGACTTAATTAGAAAGTTAGGGGCTTGTTTATTTTATGATTCCTTATGGCTCTCATTATTTTGATCACTAAATAATATAATATGCATTTCAGGAATTTAAGTGCGAGATATGCGGGAACTATAGTTATTGGGGGCGTCGTGCTTTTGAACGACATTTTAAAGAATGGCGTCATCAACATGGGATGCGATGCCTTGGTATACCAAATACAAAGAACTTCAACGAAATTACGTCAATTGAGGTACAGATTTTTATCAGTTTTATAGCATGCATGTCATGATTACCAACTGAAATAATTTGACATCACCGTTAATCAAATATAGCATCCATTGGGGTATAACTTTATCACCTAGCATTAAAACTTTCTTGTATATACTGTATTTTGTGCTACATTTCACTAATTTAATTATGAAGTATATTTGACTGCATGGTCTTGGTCTATCAGTGATGTGTGTGCGGTATCTGTAATAGTATTTATTTCCTCTTCCCTGCTAAGAAAAAACTAGTTATCTACTTGTAATCACGGTTGCTATCAATACGCAGTTTGTTATTGTCCCTATCATATACTTTACTATGGCCGCAAGTGCGCGTTTAGTTTGTGTCTCACAAGTGCACGTTTAGTTTGTGTCTTACTGAAATCACATTTCAATAAGATTCTGCGCTTGCAAAGTGCTTATGGAAATTTTGAAACTCAATTTGCGGTTGTTAACTCTGAATATCTTTTCTGTTGGTCATATTTTGCAAAATATTTTGTGGGGGTGGGGTACTTCATTGTAGACTATCAAATATGTCGTACGACTGTTAATGGTAAATACTCCTATTCTCTTTCTACTAATTTATTCCTGAGGATTTCATATCTTGGTCACAACAACCCTAGTGACAATATCTATTCGCTGGTACTATTCAGATAATATGATCAGTTTTAAAAATGAAATTAGCGAGATCACCTCATGAAATTAGAATAAAAAACTTGAAAATACCAGTGCTGTTTCTCTCCAGTCCTTTACAAATAGTTTTGGACAAAAAAACTATTTTTATGGTACCTTAAATGCTACTATTCTCTGTTGCAGGAAGCAAAAGAGCTTTGGAAGAAGATACAGCAGAGACAAGGAGTGAACAAGTGGCGCCCAGACCTAGAGGAAGAGTATGAAGACAAAGAAGGCAACATCTATAATAAGAAGACATATACCGATTTACAACGCCAGGGGCTGATATGA

Protein sequence

>MS.gene06946.t1

MSSTLLEATRAAHEEVERLERVIVKDLQNEPTSNKDRLYQSHRVRNMITTITSTTGRLIEIYDDKDNARKDEIAALGGQTATGINVFSAFYDRLKEIREYHRKHPAARVVDANDDFEDLLKEEPRIEFSGEEAFGRYLDMHALYQQYVNSKFGEPIEYSAYLDIFSETDKIPRKMKTTRQYRVYLNSLLEYLISFFHRTEPLQDLDRIFSKVTTEFDENWATGRVLGWENVNQENGHVPAQHTAIDLDYYSTVEELMEVGPERLKEALAALGLKTGGTVQQRAERLFLTKHTPLEMLDKKHFAKGARGLEKNGVAAAPQHGNLKEIALMEAKMNKLCDLLDETITRTKDNVVKKQALTYEEIEAEREEEETQEDSESEDDEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQQRQGVNKWRPDLEEEYEDKEGNIYNKKTYTDLQRQGLI