Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene016666.t1 | XP_024625350.1 | 98.5 | 133 | 2 | 0 | 1 | 133 | 1 | 133 | 1.20E-66 | 262.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene016666.t1 | P49211 | 88.0 | 133 | 16 | 0 | 1 | 133 | 1 | 133 | 1.6e-62 | 240.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene016666.t1 | I3SPQ1 | 98.5 | 133 | 2 | 0 | 1 | 133 | 1 | 133 | 8.8e-67 | 262.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene016666 | MS.gene023035 | PPI |
MS.gene45749 | MS.gene016666 | PPI |
MS.gene016666 | MS.gene051274 | PPI |
MS.gene016666 | MS.gene027346 | PPI |
MS.gene08771 | MS.gene016666 | PPI |
MS.gene016666 | MS.gene056170 | PPI |
MS.gene016666 | MS.gene95251 | PPI |
MS.gene016666 | MS.gene011050 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene016666.t1 | MTR_7g053180 | 98.496 | 133 | 2 | 0 | 1 | 133 | 1 | 133 | 5.55e-96 | 272 |
MS.gene016666.t1 | MTR_7g007920 | 96.992 | 133 | 4 | 0 | 1 | 133 | 1 | 133 | 3.33e-94 | 268 |
MS.gene016666.t1 | MTR_8g085740 | 90.977 | 133 | 12 | 0 | 1 | 133 | 1 | 133 | 1.35e-87 | 251 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene016666.t1 | AT4G18100 | 87.970 | 133 | 16 | 0 | 1 | 133 | 1 | 133 | 1.03e-87 | 251 |
MS.gene016666.t1 | AT5G46430 | 85.714 | 133 | 19 | 0 | 1 | 133 | 1 | 133 | 1.14e-86 | 248 |
MS.gene016666.t1 | AT5G46430 | 85.714 | 133 | 19 | 0 | 1 | 133 | 1 | 133 | 1.14e-86 | 248 |
Find 33 sgRNAs with CRISPR-Local
Find 123 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACGCTTCTTGATAATCTTCT+TGG | 0.286757 | 8.2:+62069314 | None:intergenic |
CGTTGAACGTGCAGCTCAAT+TGG | 0.326038 | 8.2:-62067708 | MS.gene016666:CDS |
TTGATGCCAAACATTGGATA+TGG | 0.326130 | 8.2:-62067970 | MS.gene016666:CDS |
TGTGCACAACGTCCAGGATT+TGG | 0.342709 | 8.2:-62067896 | MS.gene016666:CDS |
AGGGTATTGATTCCCGTGTT+AGG | 0.376726 | 8.2:-62068014 | MS.gene016666:CDS |
TGATAATCTTCTTGGTTAGC+AGG | 0.401006 | 8.2:+62069322 | None:intergenic |
ACAAACTTCTTGAATCCATT+TGG | 0.404947 | 8.2:+62067919 | None:intergenic |
GCGCAACCTGGCGAGCTTGT+TGG | 0.407725 | 8.2:+62067673 | None:intergenic |
TCTGAGCCATATCCAATGTT+TGG | 0.407849 | 8.2:+62067964 | None:intergenic |
TGAATCCATTTGGCAGATAG+TGG | 0.417879 | 8.2:+62067929 | None:intergenic |
TCATCAAAAGTTCCAAATCC+TGG | 0.470149 | 8.2:+62067884 | None:intergenic |
GCAAAGCTGGCGTAGGCCAA+AGG | 0.477684 | 8.2:-62068034 | MS.gene016666:CDS |
TTGTCACCAACAAGCTCGCC+AGG | 0.480042 | 8.2:-62067679 | MS.gene016666:CDS |
ACACGGGAATCAATACCCTT+TGG | 0.483819 | 8.2:+62068018 | None:intergenic |
CAAAGCTGGCGTAGGCCAAA+GGG | 0.488390 | 8.2:-62068033 | MS.gene016666:CDS |
AGCGTGTCAAGAGGTTCATC+AGG | 0.489670 | 8.2:-62069296 | MS.gene016666:CDS |
GTTTGTTGTGCACAACGTCC+AGG | 0.491285 | 8.2:-62067902 | MS.gene016666:CDS |
ACCCGCCACTATCTGCCAAA+TGG | 0.504178 | 8.2:-62067934 | MS.gene016666:CDS |
GTTACAATATGCAGCAAAGC+TGG | 0.510986 | 8.2:-62068047 | MS.gene016666:intron |
ACAATGTGTCAACCAGGAAA+AGG | 0.530451 | 8.2:-62067739 | MS.gene016666:CDS |
GTTACTTTGATGCCAAACAT+TGG | 0.535195 | 8.2:-62067976 | MS.gene016666:CDS |
TCATCAGGCCTCAAAGTGAC+AGG | 0.536054 | 8.2:-62069281 | MS.gene016666:CDS |
TCCATTTGGCAGATAGTGGC+GGG | 0.540014 | 8.2:+62067933 | None:intergenic |
GTCTTCTTGACTGCGCAACC+TGG | 0.546687 | 8.2:+62067661 | None:intergenic |
GATAATCTTCTTGGTTAGCA+GGG | 0.553675 | 8.2:+62069323 | None:intergenic |
ATCCATTTGGCAGATAGTGG+CGG | 0.591907 | 8.2:+62067932 | None:intergenic |
CGTGTTAGGAGAAAATTCAA+AGG | 0.598188 | 8.2:-62068000 | MS.gene016666:CDS |
TGACAGGAAAATATGTGTCA+AGG | 0.606818 | 8.2:-62069265 | MS.gene016666:intron |
ATAATCTTCTTGGTTAGCAG+GGG | 0.617643 | 8.2:+62069324 | None:intergenic |
ATATGCAGCAAAGCTGGCGT+AGG | 0.630348 | 8.2:-62068041 | MS.gene016666:intron |
TGTGTCAACCAGGAAAAGGA+AGG | 0.637655 | 8.2:-62067735 | MS.gene016666:CDS |
TTATCAAGAAGCGTGTCAAG+AGG | 0.643611 | 8.2:-62069305 | MS.gene016666:CDS |
TCGCACACAATGTGTCAACC+AGG | 0.659311 | 8.2:-62067745 | MS.gene016666:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATGAGAGTAAAAAAATAAA+AGG | + | chr8.2:62068842-62068861 | None:intergenic | 15.0% |
!! | ATGTTAAAATATTATAAACC+TGG | + | chr8.2:62068914-62068933 | None:intergenic | 15.0% |
!! | TTATATATGGTAGAAATTTA+GGG | - | chr8.2:62067781-62067800 | MS.gene016666:intron | 15.0% |
!!! | ATAAAATTGTTGCTTATATA+TGG | - | chr8.2:62067768-62067787 | MS.gene016666:intron | 15.0% |
!!! | TTTTAACAAAACAAAATTGA+GGG | + | chr8.2:62068295-62068314 | None:intergenic | 15.0% |
!! | AATTTAATTACACATGTGTT+TGG | + | chr8.2:62068640-62068659 | None:intergenic | 20.0% |
!! | ACAAAATGCAATAGAAAAAT+TGG | + | chr8.2:62068779-62068798 | None:intergenic | 20.0% |
!! | AGTTTCACAAAACTTATATA+AGG | + | chr8.2:62067838-62067857 | None:intergenic | 20.0% |
!! | CTTATATATGGTAGAAATTT+AGG | - | chr8.2:62067780-62067799 | MS.gene016666:intron | 20.0% |
!! | GTAAAAAAATAAAAGGTAAC+AGG | + | chr8.2:62068835-62068854 | None:intergenic | 20.0% |
!! | GTTATTATAAAAGTCTTTCA+GGG | - | chr8.2:62068092-62068111 | MS.gene016666:intron | 20.0% |
!! | TGTTATTATAAAAGTCTTTC+AGG | - | chr8.2:62068091-62068110 | MS.gene016666:intron | 20.0% |
!!! | AATATAGAGCAATTTTTTGA+AGG | - | chr8.2:62068225-62068244 | MS.gene016666:intron | 20.0% |
!!! | ATATAGAGCAATTTTTTGAA+GGG | - | chr8.2:62068226-62068245 | MS.gene016666:intron | 20.0% |
!!! | GTTTTAACAAAACAAAATTG+AGG | + | chr8.2:62068296-62068315 | None:intergenic | 20.0% |
!!! | TTGTTTGGTTCAATTATTTT+TGG | - | chr8.2:62068193-62068212 | MS.gene016666:intron | 20.0% |
! | AAACAGTAACAAAATGAAAG+AGG | + | chr8.2:62068484-62068503 | None:intergenic | 25.0% |
! | AACTCTAAATTATCCTTTGT+TGG | - | chr8.2:62068313-62068332 | MS.gene016666:intron | 25.0% |
! | AATATCTAACTTACCAACAA+AGG | + | chr8.2:62068329-62068348 | None:intergenic | 25.0% |
! | AATTGTGAAAAAAACTTGAG+AGG | - | chr8.2:62068366-62068385 | MS.gene016666:intron | 25.0% |
! | ATTGTGAAAAAAACTTGAGA+GGG | - | chr8.2:62068367-62068386 | MS.gene016666:intron | 25.0% |
!! | CTTTGTTTATTTACATCTTC+AGG | - | chr8.2:62069204-62069223 | MS.gene016666:intron | 25.0% |
!! | TTGTTGGTAAGTTAGATATT+TGG | - | chr8.2:62068329-62068348 | MS.gene016666:intron | 25.0% |
!!! | AACAAAATGAAAGAGGTATT+TGG | + | chr8.2:62068477-62068496 | None:intergenic | 25.0% |
!!! | ATAAGTTTTGTGAAACTTTC+TGG | - | chr8.2:62067841-62067860 | MS.gene016666:intron | 25.0% |
!!! | TAAGTTTTGTGAAACTTTCT+GGG | - | chr8.2:62067842-62067861 | MS.gene016666:intron | 25.0% |
!!! | TATAGAGCAATTTTTTGAAG+GGG | - | chr8.2:62068227-62068246 | MS.gene016666:intron | 25.0% |
!!! | TTGGTTCAATTATTTTTGGT+GGG | - | chr8.2:62068197-62068216 | MS.gene016666:intron | 25.0% |
!!! | TTGTTTTGTGAATTTCGTTT+TGG | - | chr8.2:62068503-62068522 | MS.gene016666:intron | 25.0% |
!!! | TTTGGTTCAATTATTTTTGG+TGG | - | chr8.2:62068196-62068215 | MS.gene016666:intron | 25.0% |
ACAAACTTCTTGAATCCATT+TGG | + | chr8.2:62069072-62069091 | None:intergenic | 30.0% | |
ACTTATTTCCAAACACACTA+AGG | + | chr8.2:62067996-62068015 | None:intergenic | 30.0% | |
ATAAGGAGAAAAGCTCAAAT+AGG | + | chr8.2:62067821-62067840 | None:intergenic | 30.0% | |
CTTATTTCCAAACACACTAA+GGG | + | chr8.2:62067995-62068014 | None:intergenic | 30.0% | |
GCAATAGAAAAATTGGTACA+AGG | + | chr8.2:62068772-62068791 | None:intergenic | 30.0% | |
GTGAGGATAATAAGCTAAAT+TGG | - | chr8.2:62068595-62068614 | MS.gene016666:intron | 30.0% | |
TACGTATTTGTAGTGTATCT+AGG | + | chr8.2:62068062-62068081 | None:intergenic | 30.0% | |
TAGTGTGTTTGGAAATAAGT+TGG | - | chr8.2:62067996-62068015 | MS.gene016666:CDS | 30.0% | |
TTAATTGAACGCACAGATAA+AGG | + | chr8.2:62068410-62068429 | None:intergenic | 30.0% | |
! | AGAAATGCTTTTCATTTCCA+AGG | - | chr8.2:62068120-62068139 | MS.gene016666:intron | 30.0% |
! | ATGTTTTGCAAATTGAATCC+AGG | - | chr8.2:62068893-62068912 | MS.gene016666:intron | 30.0% |
! | CTTTGAATTTTCTCCTAACA+CGG | + | chr8.2:62068990-62069009 | None:intergenic | 30.0% |
! | GAAATGCTTTTCATTTCCAA+GGG | - | chr8.2:62068121-62068140 | MS.gene016666:intron | 30.0% |
! | TTTGAATTTTCTCCTAACAC+GGG | + | chr8.2:62068989-62069008 | None:intergenic | 30.0% |
!!! | TGGTTCAATTATTTTTGGTG+GGG | - | chr8.2:62068198-62068217 | MS.gene016666:intron | 30.0% |
AAAAGGTAACAGGTATCAGT+AGG | + | chr8.2:62068825-62068844 | None:intergenic | 35.0% | |
ATAAACCTTTGCCTGAAATC+TGG | + | chr8.2:62068728-62068747 | None:intergenic | 35.0% | |
ATAATCTTCTTGGTTAGCAG+GGG | + | chr8.2:62067667-62067686 | None:intergenic | 35.0% | |
ATTGGTACAAGGACAAAACA+TGG | + | chr8.2:62068761-62068780 | None:intergenic | 35.0% | |
CGTGTTAGGAGAAAATTCAA+AGG | - | chr8.2:62068988-62069007 | MS.gene016666:intron | 35.0% | |
GATAATCTTCTTGGTTAGCA+GGG | + | chr8.2:62067668-62067687 | None:intergenic | 35.0% | |
TAACAATGTCTCCAGATTTC+AGG | - | chr8.2:62068714-62068733 | MS.gene016666:intron | 35.0% | |
TAGTGTATCTAGGAATCTGT+TGG | + | chr8.2:62068052-62068071 | None:intergenic | 35.0% | |
TATCAGTAGGAACATCAAAG+AGG | + | chr8.2:62068812-62068831 | None:intergenic | 35.0% | |
TCAAATAGGTCATTCGAAAC+AGG | + | chr8.2:62067807-62067826 | None:intergenic | 35.0% | |
TCATCAAAAGTTCCAAATCC+TGG | + | chr8.2:62069107-62069126 | None:intergenic | 35.0% | |
TGACAGGAAAATATGTGTCA+AGG | - | chr8.2:62067723-62067742 | MS.gene016666:CDS | 35.0% | |
TGACTTACATGACGTTTGTT+TGG | - | chr8.2:62068178-62068197 | MS.gene016666:intron | 35.0% | |
TGATAATCTTCTTGGTTAGC+AGG | + | chr8.2:62067669-62067688 | None:intergenic | 35.0% | |
TTGATGCCAAACATTGGATA+TGG | - | chr8.2:62069018-62069037 | MS.gene016666:intron | 35.0% | |
! | ACGCTTCTTGATAATCTTCT+TGG | + | chr8.2:62067677-62067696 | None:intergenic | 35.0% |
! | GTTACTTTGATGCCAAACAT+TGG | - | chr8.2:62069012-62069031 | MS.gene016666:intron | 35.0% |
!!! | AACTTTTGATGATGCACAAC+AGG | - | chr8.2:62069115-62069134 | MS.gene016666:intron | 35.0% |
!!! | CATATTTTCCTGTCACTTTG+AGG | + | chr8.2:62067718-62067737 | None:intergenic | 35.0% |
!!! | TCAATTATTTTTGGTGGGGA+GGG | - | chr8.2:62068202-62068221 | MS.gene016666:intron | 35.0% |
!!! | TTCAATTATTTTTGGTGGGG+AGG | - | chr8.2:62068201-62068220 | MS.gene016666:intron | 35.0% |
!!! | TTTGGTTGGTTGTTTTTGGA+GGG | - | chr8.2:62068148-62068167 | MS.gene016666:intron | 35.0% |
AAACATGCCCTTAGTGTGTT+TGG | - | chr8.2:62067985-62068004 | MS.gene016666:CDS | 40.0% | |
AAAGCTCAAGCATACCTTTG+AGG | + | chr8.2:62068027-62068046 | None:intergenic | 40.0% | |
AAATAAGCAACACGAGCACA+AGG | + | chr8.2:62068690-62068709 | None:intergenic | 40.0% | |
AATAAGCAACACGAGCACAA+GGG | + | chr8.2:62068689-62068708 | None:intergenic | 40.0% | |
ACAATGTGTCAACCAGGAAA+AGG | - | chr8.2:62069249-62069268 | MS.gene016666:intron | 40.0% | |
AGTCAGAATTGCAGCTACTA+AGG | + | chr8.2:62069186-62069205 | None:intergenic | 40.0% | |
GTCAGAATTGCAGCTACTAA+GGG | + | chr8.2:62069185-62069204 | None:intergenic | 40.0% | |
GTTACAATATGCAGCAAAGC+TGG | - | chr8.2:62068941-62068960 | MS.gene016666:intron | 40.0% | |
TCTGAGCCATATCCAATGTT+TGG | + | chr8.2:62069027-62069046 | None:intergenic | 40.0% | |
TGAATCCATTTGGCAGATAG+TGG | + | chr8.2:62069062-62069081 | None:intergenic | 40.0% | |
! | AAACACACTAAGGGCATGTT+TGG | + | chr8.2:62067986-62068005 | None:intergenic | 40.0% |
! | ATAAGTTGGAGAGACCTCAA+AGG | - | chr8.2:62068010-62068029 | MS.gene016666:CDS | 40.0% |
! | TTACACATGTGTTTGGTTCG+CGG | + | chr8.2:62068633-62068652 | None:intergenic | 40.0% |
! | TTATCAAGAAGCGTGTCAAG+AGG | - | chr8.2:62067683-62067702 | MS.gene016666:CDS | 40.0% |
! | TTCATATGACAAGTGCTGTG+AGG | - | chr8.2:62068578-62068597 | MS.gene016666:intron | 40.0% |
!! | CGTGTTTGGTTGGTTGTTTT+TGG | - | chr8.2:62068144-62068163 | MS.gene016666:intron | 40.0% |
!!! | AGCAATTTTTTGAAGGGGAG+TGG | - | chr8.2:62068232-62068251 | MS.gene016666:intron | 40.0% |
!!! | GTTTGGTTGGTTGTTTTTGG+AGG | - | chr8.2:62068147-62068166 | MS.gene016666:intron | 40.0% |
!!! | TTGGTTGGTTGTTTTTGGAG+GGG | - | chr8.2:62068149-62068168 | MS.gene016666:intron | 40.0% |
ACACGGGAATCAATACCCTT+TGG | + | chr8.2:62068973-62068992 | None:intergenic | 45.0% | |
ATAAGCAACACGAGCACAAG+GGG | + | chr8.2:62068688-62068707 | None:intergenic | 45.0% | |
GATGATGCACAACAGGTAAC+TGG | - | chr8.2:62069122-62069141 | MS.gene016666:intron | 45.0% | |
TGAACGCACAGATAAAGGTG+AGG | + | chr8.2:62068405-62068424 | None:intergenic | 45.0% | |
TGTCTCCAGATTTCAGGCAA+AGG | - | chr8.2:62068720-62068739 | MS.gene016666:intron | 45.0% | |
TGTGTCAACCAGGAAAAGGA+AGG | - | chr8.2:62069253-62069272 | MS.gene016666:intron | 45.0% | |
! | AACGATCTCCTTCCTTTTCC+TGG | + | chr8.2:62069264-62069283 | None:intergenic | 45.0% |
! | ATCCATTTGGCAGATAGTGG+CGG | + | chr8.2:62069059-62069078 | None:intergenic | 45.0% |
! | CAAGGGGATGTTTGGTTCAA+CGG | + | chr8.2:62068672-62068691 | None:intergenic | 45.0% |
! | TACACATGTGTTTGGTTCGC+GGG | + | chr8.2:62068632-62068651 | None:intergenic | 45.0% |
! | TTCATTTCCAAGGGCGTGTT+TGG | - | chr8.2:62068130-62068149 | MS.gene016666:intron | 45.0% |
!! | AGGGTATTGATTCCCGTGTT+AGG | - | chr8.2:62068974-62068993 | MS.gene016666:intron | 45.0% |
!!! | TTGGTTGTTTTTGGAGGGGA+GGG | - | chr8.2:62068153-62068172 | MS.gene016666:intron | 45.0% |
AGCGTGTCAAGAGGTTCATC+AGG | - | chr8.2:62067692-62067711 | MS.gene016666:CDS | 50.0% | |
ATATGCAGCAAAGCTGGCGT+AGG | - | chr8.2:62068947-62068966 | MS.gene016666:intron | 50.0% | |
CGTTGAACGTGCAGCTCAAT+TGG | - | chr8.2:62069280-62069299 | MS.gene016666:CDS | 50.0% | |
TCATCAGGCCTCAAAGTGAC+AGG | - | chr8.2:62067707-62067726 | MS.gene016666:CDS | 50.0% | |
TCGCACACAATGTGTCAACC+AGG | - | chr8.2:62069243-62069262 | MS.gene016666:intron | 50.0% | |
TGTGCACAACGTCCAGGATT+TGG | - | chr8.2:62069092-62069111 | MS.gene016666:intron | 50.0% | |
! | ACACATGTGTTTGGTTCGCG+GGG | + | chr8.2:62068631-62068650 | None:intergenic | 50.0% |
! | GGATGTTTGGTTCAACGGAG+AGG | + | chr8.2:62068667-62068686 | None:intergenic | 50.0% |
! | GTTTGGTTCAACGGAGAGGA+GGG | + | chr8.2:62068663-62068682 | None:intergenic | 50.0% |
! | TCCATTTGGCAGATAGTGGC+GGG | + | chr8.2:62069058-62069077 | None:intergenic | 50.0% |
! | TGTTTGGTTCAACGGAGAGG+AGG | + | chr8.2:62068664-62068683 | None:intergenic | 50.0% |
! | TTTCCAAGGGCGTGTTTGGT+TGG | - | chr8.2:62068134-62068153 | MS.gene016666:intron | 50.0% |
!! | GTTTGTTGTGCACAACGTCC+AGG | - | chr8.2:62069086-62069105 | MS.gene016666:intron | 50.0% |
!!! | GTTGGTTGTTTTTGGAGGGG+AGG | - | chr8.2:62068152-62068171 | MS.gene016666:intron | 50.0% |
!!! | TGGTTGTTTTTGGAGGGGAG+GGG | - | chr8.2:62068154-62068173 | MS.gene016666:intron | 50.0% |
ACCCGCCACTATCTGCCAAA+TGG | - | chr8.2:62069054-62069073 | MS.gene016666:intron | 55.0% | |
CAAAGCTGGCGTAGGCCAAA+GGG | - | chr8.2:62068955-62068974 | MS.gene016666:intron | 55.0% | |
CAACCAACCAAACACGCCCT+TGG | + | chr8.2:62068140-62068159 | None:intergenic | 55.0% | |
CACGAGCACAAGGGGATGTT+TGG | + | chr8.2:62068680-62068699 | None:intergenic | 55.0% | |
GTCTTCTTGACTGCGCAACC+TGG | + | chr8.2:62069330-62069349 | None:intergenic | 55.0% | |
TTGTCACCAACAAGCTCGCC+AGG | - | chr8.2:62069309-62069328 | MS.gene016666:CDS | 55.0% | |
! | CACATGTGTTTGGTTCGCGG+GGG | + | chr8.2:62068630-62068649 | None:intergenic | 55.0% |
GCAAAGCTGGCGTAGGCCAA+AGG | - | chr8.2:62068954-62068973 | MS.gene016666:intron | 60.0% | |
GCGCAACCTGGCGAGCTTGT+TGG | + | chr8.2:62069318-62069337 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 62067655 | 62069355 | 62067655 | ID=MS.gene016666 |
chr8.2 | mRNA | 62067655 | 62069355 | 62067655 | ID=MS.gene016666.t1;Parent=MS.gene016666 |
chr8.2 | exon | 62069266 | 62069355 | 62069266 | ID=MS.gene016666.t1.exon1;Parent=MS.gene016666.t1 |
chr8.2 | CDS | 62069266 | 62069355 | 62069266 | ID=cds.MS.gene016666.t1;Parent=MS.gene016666.t1 |
chr8.2 | exon | 62067874 | 62068055 | 62067874 | ID=MS.gene016666.t1.exon2;Parent=MS.gene016666.t1 |
chr8.2 | CDS | 62067874 | 62068055 | 62067874 | ID=cds.MS.gene016666.t1;Parent=MS.gene016666.t1 |
chr8.2 | exon | 62067655 | 62067784 | 62067655 | ID=MS.gene016666.t1.exon3;Parent=MS.gene016666.t1 |
chr8.2 | CDS | 62067655 | 62067784 | 62067655 | ID=cds.MS.gene016666.t1;Parent=MS.gene016666.t1 |
Gene Sequence |
Protein sequence |