Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056170.t1 | XP_024625350.1 | 98.5 | 133 | 2 | 0 | 1 | 133 | 1 | 133 | 1.20E-66 | 262.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056170.t1 | P49211 | 88.0 | 133 | 16 | 0 | 1 | 133 | 1 | 133 | 1.6e-62 | 240.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056170.t1 | I3SPQ1 | 98.5 | 133 | 2 | 0 | 1 | 133 | 1 | 133 | 8.8e-67 | 262.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056170 | MS.gene069313 | 0.804498 | 2.10E-49 | -1.69E-46 |
| MS.gene056170 | MS.gene07719 | 0.810395 | 1.18E-50 | -1.69E-46 |
| MS.gene056170 | MS.gene34671 | 0.805147 | 1.54E-49 | -1.69E-46 |
| MS.gene056170 | MS.gene37027 | 0.834044 | 3.76E-56 | -1.69E-46 |
| MS.gene056170 | MS.gene37029 | 0.81555 | 8.73E-52 | -1.69E-46 |
| MS.gene056170 | MS.gene38651 | 0.818562 | 1.84E-52 | -1.69E-46 |
| MS.gene056170 | MS.gene68390 | 0.8052 | 1.50E-49 | -1.69E-46 |
| MS.gene056170 | MS.gene69778 | 0.800055 | 1.72E-48 | -1.69E-46 |
| MS.gene056170 | MS.gene91485 | 0.804444 | 2.15E-49 | -1.69E-46 |
| MS.gene056170 | MS.gene92623 | 0.809605 | 1.74E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene08771 | MS.gene056170 | PPI |
| MS.gene056170 | MS.gene95251 | PPI |
| MS.gene056170 | MS.gene023035 | PPI |
| MS.gene056170 | MS.gene051274 | PPI |
| MS.gene056170 | MS.gene027346 | PPI |
| MS.gene016666 | MS.gene056170 | PPI |
| MS.gene45749 | MS.gene056170 | PPI |
| MS.gene056170 | MS.gene011050 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056170.t1 | MTR_7g053180 | 98.496 | 133 | 2 | 0 | 1 | 133 | 1 | 133 | 5.55e-96 | 272 |
| MS.gene056170.t1 | MTR_7g007920 | 96.992 | 133 | 4 | 0 | 1 | 133 | 1 | 133 | 3.33e-94 | 268 |
| MS.gene056170.t1 | MTR_8g085740 | 90.977 | 133 | 12 | 0 | 1 | 133 | 1 | 133 | 1.35e-87 | 251 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056170.t1 | AT4G18100 | 87.970 | 133 | 16 | 0 | 1 | 133 | 1 | 133 | 1.03e-87 | 251 |
| MS.gene056170.t1 | AT5G46430 | 85.714 | 133 | 19 | 0 | 1 | 133 | 1 | 133 | 1.14e-86 | 248 |
| MS.gene056170.t1 | AT5G46430 | 85.714 | 133 | 19 | 0 | 1 | 133 | 1 | 133 | 1.14e-86 | 248 |
Find 31 sgRNAs with CRISPR-Local
Find 119 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACGCTTCTTGATAATCTTCT+TGG | 0.286757 | 8.1:+65984991 | None:intergenic |
| CGTTGAACGTGCAGCTCAAT+TGG | 0.326038 | 8.1:-65983400 | MS.gene056170:CDS |
| TTGATGCCAAACATTGGATA+TGG | 0.326130 | 8.1:-65983662 | MS.gene056170:CDS |
| TGTGCACAACGTCCAGGATT+TGG | 0.342709 | 8.1:-65983588 | MS.gene056170:CDS |
| AGGGTATTGATTCCCGTGTT+AGG | 0.376726 | 8.1:-65983706 | MS.gene056170:CDS |
| ACAAACTTCTTGAATCCATT+TGG | 0.404947 | 8.1:+65983611 | None:intergenic |
| GCGCAACCTGGCGAGCTTGT+TGG | 0.407725 | 8.1:+65983365 | None:intergenic |
| TCTGAGCCATATCCAATGTT+TGG | 0.407849 | 8.1:+65983656 | None:intergenic |
| TGAATCCATTTGGCAGATAG+TGG | 0.417879 | 8.1:+65983621 | None:intergenic |
| TCATCAAAAGTTCCAAATCC+TGG | 0.470149 | 8.1:+65983576 | None:intergenic |
| GCAAAGCTGGCGTAGGCCAA+AGG | 0.477684 | 8.1:-65983726 | MS.gene056170:CDS |
| TTGTCACCAACAAGCTCGCC+AGG | 0.480042 | 8.1:-65983371 | MS.gene056170:CDS |
| ACACGGGAATCAATACCCTT+TGG | 0.483819 | 8.1:+65983710 | None:intergenic |
| CAAAGCTGGCGTAGGCCAAA+GGG | 0.488390 | 8.1:-65983725 | MS.gene056170:CDS |
| AGCGTGTCAAGAGGTTCATC+AGG | 0.489670 | 8.1:-65984973 | MS.gene056170:CDS |
| GTTTGTTGTGCACAACGTCC+AGG | 0.491285 | 8.1:-65983594 | MS.gene056170:CDS |
| ACCCGCCACTATCTGCCAAA+TGG | 0.504178 | 8.1:-65983626 | MS.gene056170:CDS |
| GTTACAATATGCAGCAAAGC+TGG | 0.510986 | 8.1:-65983739 | MS.gene056170:intron |
| ACAATGTGTCAACCAGGAAA+AGG | 0.530451 | 8.1:-65983431 | MS.gene056170:CDS |
| GTTACTTTGATGCCAAACAT+TGG | 0.535195 | 8.1:-65983668 | MS.gene056170:CDS |
| TCATCAGGCCTCAAAGTGAC+AGG | 0.536054 | 8.1:-65984958 | MS.gene056170:CDS |
| TCCATTTGGCAGATAGTGGC+GGG | 0.540014 | 8.1:+65983625 | None:intergenic |
| GTCTTCTTGACTGCGCAACC+TGG | 0.546687 | 8.1:+65983353 | None:intergenic |
| ATAATCTTCTTGGTTAGCAG+AGG | 0.563378 | 8.1:+65985001 | None:intergenic |
| ATCCATTTGGCAGATAGTGG+CGG | 0.591907 | 8.1:+65983624 | None:intergenic |
| CGTGTTAGGAGAAAATTCAA+AGG | 0.598188 | 8.1:-65983692 | MS.gene056170:CDS |
| TGACAGGAAAATATGTGTCA+AGG | 0.606818 | 8.1:-65984942 | MS.gene056170:intron |
| ATATGCAGCAAAGCTGGCGT+AGG | 0.630348 | 8.1:-65983733 | MS.gene056170:intron |
| TGTGTCAACCAGGAAAAGGA+AGG | 0.637655 | 8.1:-65983427 | MS.gene056170:CDS |
| TTATCAAGAAGCGTGTCAAG+AGG | 0.643611 | 8.1:-65984982 | MS.gene056170:CDS |
| TCGCACACAATGTGTCAACC+AGG | 0.659311 | 8.1:-65983437 | MS.gene056170:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGAGAGTAAAAAAATAAA+AGG | + | chr8.1:65984519-65984538 | None:intergenic | 15.0% |
| !! | ATGTTAAAATATTATAAACC+TGG | + | chr8.1:65984591-65984610 | None:intergenic | 15.0% |
| !! | TTATATATGGTAGAAATTTA+GGG | - | chr8.1:65983473-65983492 | MS.gene056170:intron | 15.0% |
| !!! | ATAAAATTGTTGCTTATATA+TGG | - | chr8.1:65983460-65983479 | MS.gene056170:intron | 15.0% |
| !!! | TTTTAACAAAACAAAATTGA+GGG | + | chr8.1:65983972-65983991 | None:intergenic | 15.0% |
| !!! | TTTTTTGGTTCAATTATTTT+TGG | - | chr8.1:65983870-65983889 | MS.gene056170:intron | 15.0% |
| !! | AATTTAATTACACATGTGTT+TGG | + | chr8.1:65984317-65984336 | None:intergenic | 20.0% |
| !! | ACAAAATGCAATAGAAAAAT+TGG | + | chr8.1:65984456-65984475 | None:intergenic | 20.0% |
| !! | AGTTTCACAAAACATATATA+AGG | + | chr8.1:65983530-65983549 | None:intergenic | 20.0% |
| !! | CTTATATATGGTAGAAATTT+AGG | - | chr8.1:65983472-65983491 | MS.gene056170:intron | 20.0% |
| !! | GTAAAAAAATAAAAGGTAAC+AGG | + | chr8.1:65984512-65984531 | None:intergenic | 20.0% |
| !! | GTTATTATAAAAGTCTTTCA+GGG | - | chr8.1:65983769-65983788 | MS.gene056170:intron | 20.0% |
| !! | TAATGTGTTTAGAAATATGT+TGG | - | chr8.1:65983673-65983692 | MS.gene056170:CDS | 20.0% |
| !! | TGTTATTATAAAAGTCTTTC+AGG | - | chr8.1:65983768-65983787 | MS.gene056170:intron | 20.0% |
| !!! | AATATAGAGCAATTTTTTGA+AGG | - | chr8.1:65983902-65983921 | MS.gene056170:intron | 20.0% |
| !!! | ACATATTTCTAAACACATTA+AGG | + | chr8.1:65983673-65983692 | None:intergenic | 20.0% |
| !!! | ATATAGAGCAATTTTTTGAA+GGG | - | chr8.1:65983903-65983922 | MS.gene056170:intron | 20.0% |
| !!! | CATATTTCTAAACACATTAA+GGG | + | chr8.1:65983672-65983691 | None:intergenic | 20.0% |
| !!! | GTTTTAACAAAACAAAATTG+AGG | + | chr8.1:65983973-65983992 | None:intergenic | 20.0% |
| ! | AAACAGTAACAAAATGAAAG+AGG | + | chr8.1:65984161-65984180 | None:intergenic | 25.0% |
| ! | AACTCTAAATTATCCTTTGT+TGG | - | chr8.1:65983990-65984009 | MS.gene056170:intron | 25.0% |
| ! | AATTGTGAAAAAAACTTGAG+AGG | - | chr8.1:65984043-65984062 | MS.gene056170:intron | 25.0% |
| ! | ATTGTGAAAAAAACTTGAGA+GGG | - | chr8.1:65984044-65984063 | MS.gene056170:intron | 25.0% |
| !! | ATATGTTTTGTGAAACTTTC+TGG | - | chr8.1:65983533-65983552 | MS.gene056170:intron | 25.0% |
| !! | CTTTGTTTATTTACATCTTC+AGG | - | chr8.1:65984881-65984900 | MS.gene056170:intron | 25.0% |
| !! | TATGTTTTGTGAAACTTTCT+GGG | - | chr8.1:65983534-65983553 | MS.gene056170:intron | 25.0% |
| !!! | AACAAAATGAAAGAGGTATT+TGG | + | chr8.1:65984154-65984173 | None:intergenic | 25.0% |
| !!! | TATAGAGCAATTTTTTGAAG+GGG | - | chr8.1:65983904-65983923 | MS.gene056170:intron | 25.0% |
| !!! | TTGGTTCAATTATTTTTGGT+GGG | - | chr8.1:65983874-65983893 | MS.gene056170:intron | 25.0% |
| !!! | TTGTTTTGTGAATTTCGTTT+TGG | - | chr8.1:65984180-65984199 | MS.gene056170:intron | 25.0% |
| !!! | TTTGGTTCAATTATTTTTGG+TGG | - | chr8.1:65983873-65983892 | MS.gene056170:intron | 25.0% |
| AATATCTAACTCACCAACAA+AGG | + | chr8.1:65984006-65984025 | None:intergenic | 30.0% | |
| ACAAACTTCTTGAATCCATT+TGG | + | chr8.1:65984749-65984768 | None:intergenic | 30.0% | |
| ATAAGGAGAAAAGCTCAAAT+AGG | + | chr8.1:65983513-65983532 | None:intergenic | 30.0% | |
| GCAATAGAAAAATTGGTACA+AGG | + | chr8.1:65984449-65984468 | None:intergenic | 30.0% | |
| GTGAGGATAATAAGCTAAAT+TGG | - | chr8.1:65984272-65984291 | MS.gene056170:intron | 30.0% | |
| TACGTATTTGTAGTGTATCT+AGG | + | chr8.1:65983739-65983758 | None:intergenic | 30.0% | |
| TTAATTGAACGCACAGATAA+AGG | + | chr8.1:65984087-65984106 | None:intergenic | 30.0% | |
| ! | AGAAATGCTTTTCATTTCCA+AGG | - | chr8.1:65983797-65983816 | MS.gene056170:intron | 30.0% |
| ! | ATGTTTTGCAAATTGAATCC+AGG | - | chr8.1:65984570-65984589 | MS.gene056170:intron | 30.0% |
| ! | CTTTGAATTTTCTCCTAACA+CGG | + | chr8.1:65984667-65984686 | None:intergenic | 30.0% |
| ! | GAAATGCTTTTCATTTCCAA+GGG | - | chr8.1:65983798-65983817 | MS.gene056170:intron | 30.0% |
| ! | TTGTTGGTGAGTTAGATATT+TGG | - | chr8.1:65984006-65984025 | MS.gene056170:intron | 30.0% |
| ! | TTTGAATTTTCTCCTAACAC+GGG | + | chr8.1:65984666-65984685 | None:intergenic | 30.0% |
| !!! | TGACTTACATGACGTTTTTT+TGG | - | chr8.1:65983855-65983874 | MS.gene056170:intron | 30.0% |
| !!! | TGGTTCAATTATTTTTGGTG+GGG | - | chr8.1:65983875-65983894 | MS.gene056170:intron | 30.0% |
| AAAAGGTAACAGGAATCAGT+AGG | + | chr8.1:65984502-65984521 | None:intergenic | 35.0% | |
| AATCAGTAGGAACATCAAAG+AGG | + | chr8.1:65984489-65984508 | None:intergenic | 35.0% | |
| ATAAACCTTTGCCTGAAATC+TGG | + | chr8.1:65984405-65984424 | None:intergenic | 35.0% | |
| ATAATCTTCTTGGTTAGCAG+AGG | + | chr8.1:65983359-65983378 | None:intergenic | 35.0% | |
| ATTGGTACAAGGACAAAACA+TGG | + | chr8.1:65984438-65984457 | None:intergenic | 35.0% | |
| CGTGTTAGGAGAAAATTCAA+AGG | - | chr8.1:65984665-65984684 | MS.gene056170:intron | 35.0% | |
| TAACAATGTCTCCAGATTTC+AGG | - | chr8.1:65984391-65984410 | MS.gene056170:intron | 35.0% | |
| TAGTGTATCTAGGAATCTGT+TGG | + | chr8.1:65983729-65983748 | None:intergenic | 35.0% | |
| TCAAATAGGTCATTCGAAAC+AGG | + | chr8.1:65983499-65983518 | None:intergenic | 35.0% | |
| TCATCAAAAGTTCCAAATCC+TGG | + | chr8.1:65984784-65984803 | None:intergenic | 35.0% | |
| TGACAGGAAAATATGTGTCA+AGG | - | chr8.1:65983415-65983434 | MS.gene056170:CDS | 35.0% | |
| TTGATGCCAAACATTGGATA+TGG | - | chr8.1:65984695-65984714 | MS.gene056170:intron | 35.0% | |
| ! | AAACACATTAAGGGCATGTT+TGG | + | chr8.1:65983663-65983682 | None:intergenic | 35.0% |
| ! | ACGCTTCTTGATAATCTTCT+TGG | + | chr8.1:65983369-65983388 | None:intergenic | 35.0% |
| ! | GTTACTTTGATGCCAAACAT+TGG | - | chr8.1:65984689-65984708 | MS.gene056170:intron | 35.0% |
| !!! | AACTTTTGATGATGCACAAC+AGG | - | chr8.1:65984792-65984811 | MS.gene056170:intron | 35.0% |
| !!! | CATATTTTCCTGTCACTTTG+AGG | + | chr8.1:65983410-65983429 | None:intergenic | 35.0% |
| !!! | TCAATTATTTTTGGTGGGGA+GGG | - | chr8.1:65983879-65983898 | MS.gene056170:intron | 35.0% |
| !!! | TTCAATTATTTTTGGTGGGG+AGG | - | chr8.1:65983878-65983897 | MS.gene056170:intron | 35.0% |
| !!! | TTTGGTTGGTTGTTTTTGGA+GGG | - | chr8.1:65983825-65983844 | MS.gene056170:intron | 35.0% |
| AAAGCTCAAGCATACCTTTG+AGG | + | chr8.1:65983704-65983723 | None:intergenic | 40.0% | |
| AAATAAGCAACACGAGCACA+AGG | + | chr8.1:65984367-65984386 | None:intergenic | 40.0% | |
| AATAAGCAACACGAGCACAA+GGG | + | chr8.1:65984366-65984385 | None:intergenic | 40.0% | |
| ACAATGTGTCAACCAGGAAA+AGG | - | chr8.1:65984926-65984945 | MS.gene056170:intron | 40.0% | |
| AGTCAGAATTGCAGCTACTA+AGG | + | chr8.1:65984863-65984882 | None:intergenic | 40.0% | |
| ATATGTTGGAGAGACCTCAA+AGG | - | chr8.1:65983687-65983706 | MS.gene056170:CDS | 40.0% | |
| GTCAGAATTGCAGCTACTAA+GGG | + | chr8.1:65984862-65984881 | None:intergenic | 40.0% | |
| GTTACAATATGCAGCAAAGC+TGG | - | chr8.1:65984618-65984637 | MS.gene056170:intron | 40.0% | |
| TCTGAGCCATATCCAATGTT+TGG | + | chr8.1:65984704-65984723 | None:intergenic | 40.0% | |
| TGAATCCATTTGGCAGATAG+TGG | + | chr8.1:65984739-65984758 | None:intergenic | 40.0% | |
| ! | TTACACATGTGTTTGGTTCG+CGG | + | chr8.1:65984310-65984329 | None:intergenic | 40.0% |
| ! | TTATCAAGAAGCGTGTCAAG+AGG | - | chr8.1:65983375-65983394 | MS.gene056170:CDS | 40.0% |
| ! | TTCATATGACAAGTGCTGTG+AGG | - | chr8.1:65984255-65984274 | MS.gene056170:intron | 40.0% |
| !! | CGTGTTTGGTTGGTTGTTTT+TGG | - | chr8.1:65983821-65983840 | MS.gene056170:intron | 40.0% |
| !!! | GTTTGGTTGGTTGTTTTTGG+AGG | - | chr8.1:65983824-65983843 | MS.gene056170:intron | 40.0% |
| !!! | TTGGTTGGTTGTTTTTGGAG+GGG | - | chr8.1:65983826-65983845 | MS.gene056170:intron | 40.0% |
| ACACGGGAATCAATACCCTT+TGG | + | chr8.1:65984650-65984669 | None:intergenic | 45.0% | |
| ATAAGCAACACGAGCACAAG+GGG | + | chr8.1:65984365-65984384 | None:intergenic | 45.0% | |
| GATGATGCACAACAGGTAAC+TGG | - | chr8.1:65984799-65984818 | MS.gene056170:intron | 45.0% | |
| TGAACGCACAGATAAAGGTG+AGG | + | chr8.1:65984082-65984101 | None:intergenic | 45.0% | |
| TGTCTCCAGATTTCAGGCAA+AGG | - | chr8.1:65984397-65984416 | MS.gene056170:intron | 45.0% | |
| TGTGTCAACCAGGAAAAGGA+AGG | - | chr8.1:65984930-65984949 | MS.gene056170:intron | 45.0% | |
| ! | AACGATCTCCTTCCTTTTCC+TGG | + | chr8.1:65984941-65984960 | None:intergenic | 45.0% |
| ! | ATCCATTTGGCAGATAGTGG+CGG | + | chr8.1:65984736-65984755 | None:intergenic | 45.0% |
| ! | CAAGGGGATGTTTGGTTCAA+CGG | + | chr8.1:65984349-65984368 | None:intergenic | 45.0% |
| ! | TACACATGTGTTTGGTTCGC+GGG | + | chr8.1:65984309-65984328 | None:intergenic | 45.0% |
| ! | TTCATTTCCAAGGGCGTGTT+TGG | - | chr8.1:65983807-65983826 | MS.gene056170:intron | 45.0% |
| !! | AGGGTATTGATTCCCGTGTT+AGG | - | chr8.1:65984651-65984670 | MS.gene056170:intron | 45.0% |
| !!! | TTGGTTGTTTTTGGAGGGGA+GGG | - | chr8.1:65983830-65983849 | MS.gene056170:intron | 45.0% |
| AGCGTGTCAAGAGGTTCATC+AGG | - | chr8.1:65983384-65983403 | MS.gene056170:CDS | 50.0% | |
| ATATGCAGCAAAGCTGGCGT+AGG | - | chr8.1:65984624-65984643 | MS.gene056170:intron | 50.0% | |
| CGTTGAACGTGCAGCTCAAT+TGG | - | chr8.1:65984957-65984976 | MS.gene056170:CDS | 50.0% | |
| TCATCAGGCCTCAAAGTGAC+AGG | - | chr8.1:65983399-65983418 | MS.gene056170:CDS | 50.0% | |
| TCGCACACAATGTGTCAACC+AGG | - | chr8.1:65984920-65984939 | MS.gene056170:intron | 50.0% | |
| TGTGCACAACGTCCAGGATT+TGG | - | chr8.1:65984769-65984788 | MS.gene056170:intron | 50.0% | |
| ! | ACACATGTGTTTGGTTCGCG+GGG | + | chr8.1:65984308-65984327 | None:intergenic | 50.0% |
| ! | GGATGTTTGGTTCAACGGAG+AGG | + | chr8.1:65984344-65984363 | None:intergenic | 50.0% |
| ! | GTTTGGTTCAACGGAGAGGA+GGG | + | chr8.1:65984340-65984359 | None:intergenic | 50.0% |
| ! | TCCATTTGGCAGATAGTGGC+GGG | + | chr8.1:65984735-65984754 | None:intergenic | 50.0% |
| ! | TGTTTGGTTCAACGGAGAGG+AGG | + | chr8.1:65984341-65984360 | None:intergenic | 50.0% |
| ! | TTTCCAAGGGCGTGTTTGGT+TGG | - | chr8.1:65983811-65983830 | MS.gene056170:intron | 50.0% |
| !! | GTTTGTTGTGCACAACGTCC+AGG | - | chr8.1:65984763-65984782 | MS.gene056170:intron | 50.0% |
| !!! | GTTGGTTGTTTTTGGAGGGG+AGG | - | chr8.1:65983829-65983848 | MS.gene056170:intron | 50.0% |
| !!! | TGGTTGTTTTTGGAGGGGAG+GGG | - | chr8.1:65983831-65983850 | MS.gene056170:intron | 50.0% |
| ACCCGCCACTATCTGCCAAA+TGG | - | chr8.1:65984731-65984750 | MS.gene056170:intron | 55.0% | |
| CAAAGCTGGCGTAGGCCAAA+GGG | - | chr8.1:65984632-65984651 | MS.gene056170:intron | 55.0% | |
| CAACCAACCAAACACGCCCT+TGG | + | chr8.1:65983817-65983836 | None:intergenic | 55.0% | |
| CACGAGCACAAGGGGATGTT+TGG | + | chr8.1:65984357-65984376 | None:intergenic | 55.0% | |
| GTCTTCTTGACTGCGCAACC+TGG | + | chr8.1:65985007-65985026 | None:intergenic | 55.0% | |
| TTGTCACCAACAAGCTCGCC+AGG | - | chr8.1:65984986-65985005 | MS.gene056170:CDS | 55.0% | |
| ! | CACATGTGTTTGGTTCGCGG+GGG | + | chr8.1:65984307-65984326 | None:intergenic | 55.0% |
| GCAAAGCTGGCGTAGGCCAA+AGG | - | chr8.1:65984631-65984650 | MS.gene056170:intron | 60.0% | |
| GCGCAACCTGGCGAGCTTGT+TGG | + | chr8.1:65984995-65985014 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 65983347 | 65985032 | 65983347 | ID=MS.gene056170 |
| chr8.1 | mRNA | 65983347 | 65985032 | 65983347 | ID=MS.gene056170.t1;Parent=MS.gene056170 |
| chr8.1 | exon | 65984943 | 65985032 | 65984943 | ID=MS.gene056170.t1.exon1;Parent=MS.gene056170.t1 |
| chr8.1 | CDS | 65984943 | 65985032 | 65984943 | ID=cds.MS.gene056170.t1;Parent=MS.gene056170.t1 |
| chr8.1 | exon | 65983566 | 65983747 | 65983566 | ID=MS.gene056170.t1.exon2;Parent=MS.gene056170.t1 |
| chr8.1 | CDS | 65983566 | 65983747 | 65983566 | ID=cds.MS.gene056170.t1;Parent=MS.gene056170.t1 |
| chr8.1 | exon | 65983347 | 65983476 | 65983347 | ID=MS.gene056170.t1.exon3;Parent=MS.gene056170.t1 |
| chr8.1 | CDS | 65983347 | 65983476 | 65983347 | ID=cds.MS.gene056170.t1;Parent=MS.gene056170.t1 |
| Gene Sequence |
| Protein sequence |
