Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016853.t1 | XP_003617079.1 | 96.4 | 389 | 14 | 0 | 1 | 389 | 3 | 391 | 6.20E-220 | 773.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016853.t1 | Q9FH04 | 71.5 | 375 | 106 | 1 | 14 | 387 | 15 | 389 | 3.0e-162 | 572.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016853.t1 | G7K2X3 | 96.4 | 389 | 14 | 0 | 1 | 389 | 3 | 391 | 4.5e-220 | 773.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene016853 | MS.gene79768 | PPI |
| MS.gene016853 | MS.gene83309 | PPI |
| MS.gene016853 | MS.gene030545 | PPI |
| MS.gene016853 | MS.gene70145 | PPI |
| MS.gene016853 | MS.gene069804 | PPI |
| MS.gene016853 | MS.gene042841 | PPI |
| MS.gene016853 | MS.gene73688 | PPI |
| MS.gene016853 | MS.gene49741 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016853.t1 | MTR_5g087710 | 96.401 | 389 | 14 | 0 | 1 | 389 | 3 | 391 | 0.0 | 770 |
| MS.gene016853.t1 | MTR_3g079180 | 74.805 | 385 | 96 | 1 | 6 | 389 | 2 | 386 | 0.0 | 613 |
| MS.gene016853.t1 | MTR_3g099460 | 61.111 | 378 | 143 | 3 | 14 | 388 | 14 | 390 | 6.50e-164 | 465 |
| MS.gene016853.t1 | MTR_3g099460 | 60.053 | 378 | 140 | 4 | 14 | 388 | 14 | 383 | 2.84e-157 | 448 |
| MS.gene016853.t1 | MTR_3g079170 | 76.015 | 271 | 51 | 1 | 109 | 379 | 26 | 282 | 3.06e-152 | 431 |
| MS.gene016853.t1 | MTR_3g099460 | 60.991 | 323 | 124 | 2 | 67 | 388 | 6 | 327 | 3.47e-136 | 392 |
| MS.gene016853.t1 | MTR_1g069430 | 50.802 | 374 | 182 | 2 | 14 | 387 | 6 | 377 | 4.91e-133 | 386 |
| MS.gene016853.t1 | MTR_6g068930 | 49.738 | 382 | 186 | 4 | 8 | 389 | 2 | 377 | 2.90e-129 | 376 |
| MS.gene016853.t1 | MTR_7g099040 | 48.413 | 378 | 193 | 2 | 8 | 385 | 2 | 377 | 4.16e-126 | 369 |
| MS.gene016853.t1 | MTR_3g089940 | 45.288 | 382 | 205 | 4 | 9 | 389 | 2 | 380 | 1.62e-121 | 357 |
| MS.gene016853.t1 | MTR_3g089940 | 45.358 | 377 | 202 | 4 | 14 | 389 | 7 | 380 | 1.01e-120 | 355 |
| MS.gene016853.t1 | MTR_3g089977 | 45.600 | 375 | 200 | 4 | 14 | 387 | 7 | 378 | 1.28e-120 | 354 |
| MS.gene016853.t1 | MTR_3g089970 | 45.358 | 377 | 202 | 4 | 14 | 389 | 8 | 381 | 9.61e-120 | 352 |
| MS.gene016853.t1 | MTR_7g068330 | 47.409 | 386 | 195 | 5 | 8 | 387 | 2 | 385 | 1.44e-118 | 349 |
| MS.gene016853.t1 | MTR_3g099460 | 61.189 | 286 | 108 | 2 | 14 | 296 | 14 | 299 | 1.33e-116 | 342 |
| MS.gene016853.t1 | MTR_7g068320 | 47.619 | 378 | 192 | 5 | 14 | 387 | 18 | 393 | 1.64e-116 | 344 |
| MS.gene016853.t1 | MTR_3g099460 | 59.790 | 286 | 105 | 3 | 14 | 296 | 14 | 292 | 5.28e-110 | 325 |
| MS.gene016853.t1 | MTR_5g045710 | 44.211 | 380 | 203 | 7 | 10 | 387 | 2 | 374 | 7.32e-104 | 311 |
| MS.gene016853.t1 | MTR_3g089940 | 44.737 | 342 | 185 | 4 | 9 | 349 | 2 | 340 | 7.47e-104 | 311 |
| MS.gene016853.t1 | MTR_0001s0660 | 44.032 | 377 | 203 | 5 | 10 | 385 | 2 | 371 | 2.47e-103 | 313 |
| MS.gene016853.t1 | MTR_3g089940 | 44.807 | 337 | 182 | 4 | 14 | 349 | 7 | 340 | 5.00e-103 | 308 |
| MS.gene016853.t1 | MTR_5g045710 | 43.537 | 294 | 160 | 5 | 95 | 387 | 3 | 291 | 3.00e-76 | 238 |
| MS.gene016853.t1 | MTR_8g095220 | 30.971 | 381 | 244 | 12 | 15 | 385 | 51 | 422 | 1.80e-38 | 143 |
| MS.gene016853.t1 | MTR_8g095220 | 33.603 | 247 | 153 | 6 | 15 | 253 | 51 | 294 | 2.30e-27 | 110 |
| MS.gene016853.t1 | MTR_6g465010 | 24.928 | 345 | 220 | 11 | 42 | 378 | 23 | 336 | 4.11e-21 | 94.0 |
| MS.gene016853.t1 | MTR_6g466320 | 24.928 | 345 | 220 | 11 | 42 | 378 | 39 | 352 | 6.92e-21 | 93.2 |
| MS.gene016853.t1 | MTR_6g465010 | 24.928 | 345 | 220 | 11 | 42 | 378 | 39 | 352 | 6.92e-21 | 93.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016853.t1 | AT5G42250 | 69.409 | 389 | 117 | 2 | 1 | 387 | 1 | 389 | 0.0 | 573 |
| MS.gene016853.t1 | AT1G22430 | 58.869 | 389 | 156 | 4 | 3 | 389 | 2 | 388 | 2.41e-169 | 479 |
| MS.gene016853.t1 | AT1G22430 | 58.869 | 389 | 156 | 4 | 3 | 389 | 2 | 388 | 2.41e-169 | 479 |
| MS.gene016853.t1 | AT4G22110 | 60.358 | 391 | 151 | 4 | 1 | 389 | 1 | 389 | 6.18e-169 | 478 |
| MS.gene016853.t1 | AT4G22110 | 60.358 | 391 | 151 | 4 | 1 | 389 | 1 | 389 | 6.18e-169 | 478 |
| MS.gene016853.t1 | AT1G22440 | 59.740 | 385 | 151 | 4 | 7 | 389 | 4 | 386 | 5.13e-167 | 473 |
| MS.gene016853.t1 | AT5G43940 | 50.269 | 372 | 183 | 2 | 14 | 385 | 6 | 375 | 1.08e-134 | 390 |
| MS.gene016853.t1 | AT5G24760 | 49.482 | 386 | 187 | 5 | 6 | 389 | 2 | 381 | 4.96e-131 | 381 |
| MS.gene016853.t1 | AT5G43940 | 49.727 | 366 | 182 | 2 | 20 | 385 | 24 | 387 | 5.64e-131 | 381 |
| MS.gene016853.t1 | AT1G22430 | 59.661 | 295 | 116 | 3 | 3 | 295 | 2 | 295 | 5.10e-126 | 366 |
| MS.gene016853.t1 | AT1G64710 | 48.267 | 375 | 189 | 5 | 16 | 387 | 8 | 380 | 6.05e-124 | 363 |
| MS.gene016853.t1 | AT1G77120 | 47.059 | 374 | 196 | 2 | 14 | 387 | 6 | 377 | 1.09e-123 | 362 |
| MS.gene016853.t1 | AT5G24760 | 49.721 | 358 | 174 | 4 | 32 | 389 | 1 | 352 | 1.06e-122 | 359 |
| MS.gene016853.t1 | AT5G24760 | 49.721 | 358 | 174 | 4 | 32 | 389 | 1 | 352 | 1.06e-122 | 359 |
| MS.gene016853.t1 | AT1G32780 | 48.177 | 384 | 187 | 6 | 16 | 389 | 9 | 390 | 1.52e-117 | 347 |
| MS.gene016853.t1 | AT1G64710 | 47.632 | 359 | 183 | 5 | 32 | 387 | 1 | 357 | 4.05e-117 | 345 |
| MS.gene016853.t1 | AT4G22110 | 61.423 | 267 | 100 | 3 | 1 | 265 | 1 | 266 | 1.35e-110 | 325 |
| MS.gene016853.t1 | AT1G22430 | 57.778 | 270 | 111 | 3 | 3 | 270 | 2 | 270 | 1.46e-110 | 326 |
| MS.gene016853.t1 | AT1G22430 | 57.778 | 270 | 111 | 3 | 3 | 270 | 2 | 270 | 1.46e-110 | 326 |
| MS.gene016853.t1 | AT1G64710 | 47.403 | 308 | 158 | 4 | 82 | 387 | 6 | 311 | 3.32e-98 | 295 |
| MS.gene016853.t1 | AT5G24760 | 48.889 | 270 | 135 | 3 | 120 | 389 | 1 | 267 | 2.14e-86 | 263 |
| MS.gene016853.t1 | AT5G63620 | 28.533 | 368 | 249 | 8 | 19 | 379 | 57 | 417 | 7.73e-38 | 141 |
| MS.gene016853.t1 | AT5G63620 | 28.533 | 368 | 249 | 8 | 19 | 379 | 57 | 417 | 9.58e-38 | 141 |
| MS.gene016853.t1 | AT5G63620 | 29.461 | 241 | 163 | 3 | 19 | 253 | 57 | 296 | 4.66e-26 | 107 |
| MS.gene016853.t1 | AT5G51970 | 24.930 | 357 | 218 | 12 | 36 | 378 | 34 | 354 | 9.74e-20 | 90.1 |
| MS.gene016853.t1 | AT5G51970 | 24.930 | 357 | 218 | 12 | 36 | 378 | 34 | 354 | 9.74e-20 | 90.1 |
| MS.gene016853.t1 | AT4G37990 | 24.169 | 331 | 210 | 9 | 44 | 364 | 35 | 334 | 9.30e-12 | 66.2 |
| MS.gene016853.t1 | AT4G37970 | 28.571 | 147 | 88 | 3 | 44 | 188 | 40 | 171 | 7.97e-11 | 62.4 |
| MS.gene016853.t1 | AT4G37970 | 28.571 | 147 | 88 | 3 | 44 | 188 | 40 | 171 | 8.28e-11 | 62.4 |
Find 79 sgRNAs with CRISPR-Local
Find 199 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACACACACCTTTACATCTTA+TGG | 0.160696 | 5.2:+74290164 | None:intergenic |
| TATTTATCAGGAACTCAATT+TGG | 0.180490 | 5.2:-74287181 | MS.gene016853:intron |
| ACTCTTATGGGGTCTATATT+TGG | 0.200744 | 5.2:-74287401 | MS.gene016853:CDS |
| TGTGGAGCAACTAGGATTAT+AGG | 0.276027 | 5.2:-74288207 | MS.gene016853:CDS |
| CTTTATTCAGCGAACAAGTT+TGG | 0.298247 | 5.2:-74288032 | MS.gene016853:intron |
| CACACACCTTTACATCTTAT+GGG | 0.302890 | 5.2:+74290165 | None:intergenic |
| ACTAGATTCACTGATCTAAA+TGG | 0.304247 | 5.2:-74288911 | MS.gene016853:CDS |
| CTTTGTAAATCCTGGAGAAT+TGG | 0.307283 | 5.2:-74288000 | MS.gene016853:CDS |
| TAAGAGTCTTCCCTTGAAAA+AGG | 0.321797 | 5.2:+74287417 | None:intergenic |
| CCATCACTTGTTGCTGCAGC+AGG | 0.349672 | 5.2:+74290195 | None:intergenic |
| TTTCAAGGGAAGACTCTTAT+GGG | 0.369580 | 5.2:-74287413 | MS.gene016853:CDS |
| ATCCAACAATTCCGCCCAAC+AGG | 0.373054 | 5.2:-74288808 | MS.gene016853:CDS |
| CTTTACATCTTATGGGTTGT+TGG | 0.379879 | 5.2:+74290172 | None:intergenic |
| CATAGTTATCCCAATCTTCA+TGG | 0.380845 | 5.2:-74289032 | MS.gene016853:CDS |
| AGTGTCTTCGGTGTGTGATT+TGG | 0.391376 | 5.2:-74287089 | MS.gene016853:CDS |
| CTCAGTTGTGGTGTATCAAC+AGG | 0.395594 | 5.2:-74288776 | MS.gene016853:intron |
| TCACAATCAGCCATGAAGAT+TGG | 0.401526 | 5.2:+74289022 | None:intergenic |
| GCCCTGTTGGGCGGAATTGT+TGG | 0.404999 | 5.2:+74288806 | None:intergenic |
| GAAAACAGCAAATGTTGAAC+CGG | 0.406203 | 5.2:-74288648 | MS.gene016853:CDS |
| TGGATCAATCTTGAGTAGAT+TGG | 0.410420 | 5.2:+74288826 | None:intergenic |
| CACAATCAGCCATGAAGATT+GGG | 0.418681 | 5.2:+74289023 | None:intergenic |
| GCTGAAGGAGCTAGACTTTG+TGG | 0.441563 | 5.2:-74288225 | MS.gene016853:CDS |
| CTGAGGAGGCATGCCCTGTT+GGG | 0.448260 | 5.2:+74288794 | None:intergenic |
| GTCACAGACTTTGTAAATCC+TGG | 0.452717 | 5.2:-74288008 | MS.gene016853:CDS |
| GGAAAACAAATCTGTGAGTC+AGG | 0.454117 | 5.2:-74287979 | MS.gene016853:CDS |
| ATCCAAGGTTTAATATCAAA+AGG | 0.456805 | 5.2:+74288950 | None:intergenic |
| GCCTCATGACCCATTATCCT+TGG | 0.458805 | 5.2:+74289621 | None:intergenic |
| AACTAGAGACAAATATGAAA+TGG | 0.460302 | 5.2:+74288876 | None:intergenic |
| TGCAGCAGGTTTATCTTCCA+TGG | 0.473298 | 5.2:+74290209 | None:intergenic |
| TAATGGGTCATGAGGCAATT+GGG | 0.475842 | 5.2:-74289614 | MS.gene016853:intron |
| TCAATAATCAGTGGCTCACC+TGG | 0.476109 | 5.2:+74289882 | None:intergenic |
| TGACAAAAGGAGAGTGTCTT+CGG | 0.477160 | 5.2:-74287101 | MS.gene016853:CDS |
| ATGTGTTGGTATGGCATCAT+TGG | 0.482347 | 5.2:-74287913 | MS.gene016853:CDS |
| GATTATTGAGGAGATCTTTG+TGG | 0.489087 | 5.2:-74289868 | MS.gene016853:CDS |
| CTAGACTTTGTGGAGCAACT+AGG | 0.495288 | 5.2:-74288215 | MS.gene016853:CDS |
| TTGATACTCAACTTAGATCC+TGG | 0.495669 | 5.2:+74287452 | None:intergenic |
| CTAGCTTCATGTGGCATTGG+TGG | 0.495830 | 5.2:+74289843 | None:intergenic |
| TTGCTTTGAATGTGTTGGTA+TGG | 0.503086 | 5.2:-74287922 | MS.gene016853:CDS |
| ACTGAGGAGGCATGCCCTGT+TGG | 0.503327 | 5.2:+74288793 | None:intergenic |
| AAGAATGGGTACATCAGACT+TGG | 0.513039 | 5.2:+74287367 | None:intergenic |
| CTTATGGGGTCTATATTTGG+AGG | 0.514741 | 5.2:-74287398 | MS.gene016853:CDS |
| CAACAACCCATAAGATGTAA+AGG | 0.516393 | 5.2:-74290171 | MS.gene016853:intron |
| AGCATATGCTTCATGTAGAA+AGG | 0.522535 | 5.2:-74287883 | MS.gene016853:intron |
| GAAGTAACAGAAGTTACAAA+GGG | 0.527117 | 5.2:-74289058 | MS.gene016853:CDS |
| ATAATGGGTCATGAGGCAAT+TGG | 0.527994 | 5.2:-74289615 | MS.gene016853:CDS |
| ATCCTAGCTTCATGTGGCAT+TGG | 0.528211 | 5.2:+74289840 | None:intergenic |
| GATTATTGCTTTGAATGTGT+TGG | 0.539967 | 5.2:-74287927 | MS.gene016853:CDS |
| GGAAGTAACAGAAGTTACAA+AGG | 0.541099 | 5.2:-74289059 | MS.gene016853:CDS |
| AGGGCATGCCTCCTCAGTTG+TGG | 0.551435 | 5.2:-74288788 | MS.gene016853:CDS |
| ATGTTAGGAGTGGACAAGCC+AGG | 0.552820 | 5.2:-74287470 | MS.gene016853:CDS |
| ATTGTTTCCTAGGTGGCTGA+AGG | 0.554628 | 5.2:-74288240 | MS.gene016853:intron |
| ACTCGGATGTATTGGATTAG+CGG | 0.554730 | 5.2:-74288603 | MS.gene016853:intron |
| TCCAAGGATAATGGGTCATG+AGG | 0.566290 | 5.2:-74289622 | MS.gene016853:CDS |
| AGGAGGCATGCCCTGTTGGG+CGG | 0.567470 | 5.2:+74288797 | None:intergenic |
| GTTATCATAGAGATGACTGA+TGG | 0.568363 | 5.2:-74287957 | MS.gene016853:CDS |
| GCTGCGGTTTGTCGCAAACC+AGG | 0.570156 | 5.2:-74289900 | MS.gene016853:CDS |
| CACCAATGCCACATGAAGCT+AGG | 0.581082 | 5.2:-74289842 | MS.gene016853:CDS |
| TCTTCGGTGTGTGATTTGGA+TGG | 0.582969 | 5.2:-74287085 | MS.gene016853:CDS |
| AAAACAGCAAATGTTGAACC+GGG | 0.583487 | 5.2:-74288647 | MS.gene016853:CDS |
| CCTGCTGCAGCAACAAGTGA+TGG | 0.586016 | 5.2:-74290195 | MS.gene016853:CDS |
| CAAAAGGAAACTTTGAACAA+AGG | 0.590036 | 5.2:+74288966 | None:intergenic |
| TCTTAGGGGTAGGTGCTGCA+TGG | 0.593039 | 5.2:-74288670 | MS.gene016853:intron |
| AGAATGGGTACATCAGACTT+GGG | 0.595366 | 5.2:+74287368 | None:intergenic |
| AGCAACTAGGATTATAGGTG+TGG | 0.598387 | 5.2:-74288202 | MS.gene016853:CDS |
| TCCAGGGTTGTGGAAAGTGT+TGG | 0.599735 | 5.2:-74289085 | MS.gene016853:intron |
| GATATCACTGTGACAAAGAG+AGG | 0.603012 | 5.2:+74289803 | None:intergenic |
| AGGTGAGCCACTGATTATTG+AGG | 0.608296 | 5.2:-74289880 | MS.gene016853:CDS |
| TTCAAGGGAAGACTCTTATG+GGG | 0.612341 | 5.2:-74287412 | MS.gene016853:CDS |
| GGTTGTGGAAAGTGTTGGAG+AGG | 0.628245 | 5.2:-74289080 | MS.gene016853:CDS |
| ATCATAGAGATGACTGATGG+AGG | 0.637658 | 5.2:-74287954 | MS.gene016853:CDS |
| AAGATCTCCTCAATAATCAG+TGG | 0.639801 | 5.2:+74289873 | None:intergenic |
| TTGATACACCACAACTGAGG+AGG | 0.646650 | 5.2:+74288780 | None:intergenic |
| TCCAACAATTCCGCCCAACA+GGG | 0.648238 | 5.2:-74288807 | MS.gene016853:CDS |
| ATTTAGATCAGTGAATCTAG+TGG | 0.650022 | 5.2:+74288913 | None:intergenic |
| GTATCATATCTAAGCATCCA+AGG | 0.653021 | 5.2:+74288935 | None:intergenic |
| AAAACAGCTACTGTCGACCC+CGG | 0.659300 | 5.2:+74288629 | None:intergenic |
| ATACGAATCCTAGCTTCATG+TGG | 0.667924 | 5.2:+74289834 | None:intergenic |
| CTGTTGATACACCACAACTG+AGG | 0.718420 | 5.2:+74288777 | None:intergenic |
| AAACAGCAAATGTTGAACCG+GGG | 0.725303 | 5.2:-74288646 | MS.gene016853:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAAAAGATAAAATATAAT+TGG | + | chr5.2:74288903-74288922 | None:intergenic | 10.0% |
| !! | TATTATCAAATTAAATTGAA+TGG | + | chr5.2:74287249-74287268 | None:intergenic | 10.0% |
| !!! | CTAATTTTTTAACTTTTTTT+TGG | - | chr5.2:74287874-74287893 | MS.gene016853:intron | 10.0% |
| !!! | GAAACTATTTTTTTTTTTTT+TGG | - | chr5.2:74287292-74287311 | MS.gene016853:intron | 10.0% |
| !! | ATACAAATTAATAAAATGCA+TGG | + | chr5.2:74287705-74287724 | None:intergenic | 15.0% |
| !!! | ATGTAATAGTTTTTTTTTGA+AGG | - | chr5.2:74287201-74287220 | MS.gene016853:intron | 15.0% |
| !! | ATATTTCTCATTTCCTAATT+AGG | - | chr5.2:74287745-74287764 | MS.gene016853:intron | 20.0% |
| !! | TATAAAATGTTAGCAAAAGA+GGG | + | chr5.2:74290012-74290031 | None:intergenic | 20.0% |
| !! | TGTAATGTTTATAATGTACT+TGG | - | chr5.2:74288029-74288048 | MS.gene016853:intron | 20.0% |
| !! | TTATAAAATGTTAGCAAAAG+AGG | + | chr5.2:74290013-74290032 | None:intergenic | 20.0% |
| !! | TTATCAAACATCAATTCTTA+GGG | - | chr5.2:74288599-74288618 | MS.gene016853:intron | 20.0% |
| !! | TTTATCAAACATCAATTCTT+AGG | - | chr5.2:74288598-74288617 | MS.gene016853:intron | 20.0% |
| !!! | AATTAATTTTTATGTGATCC+AGG | - | chr5.2:74288182-74288201 | MS.gene016853:CDS | 20.0% |
| !!! | ATTAATTTTTATGTGATCCA+GGG | - | chr5.2:74288183-74288202 | MS.gene016853:CDS | 20.0% |
| !!! | CTTTATTTTAACCATGTTAT+TGG | - | chr5.2:74289477-74289496 | MS.gene016853:intron | 20.0% |
| !!! | GTTTCTTTTTTTACTTTTGA+AGG | - | chr5.2:74287623-74287642 | MS.gene016853:intron | 20.0% |
| !!! | TAGTAATGTCAACAATTTTT+AGG | - | chr5.2:74290063-74290082 | MS.gene016853:intron | 20.0% |
| !!! | TTACCAATTTCAAATTTTTC+TGG | + | chr5.2:74289116-74289135 | None:intergenic | 20.0% |
| !!! | TTTTTCTCCAATTATTTATC+AGG | - | chr5.2:74290091-74290110 | MS.gene016853:intron | 20.0% |
| ! | AAAAACAATTATGTTAGGAG+TGG | - | chr5.2:74289804-74289823 | MS.gene016853:CDS | 25.0% |
| ! | AACTAGAGACAAATATGAAA+TGG | + | chr5.2:74288411-74288430 | None:intergenic | 25.0% |
| ! | ATAAAATGTTAGCAAAAGAG+GGG | + | chr5.2:74290011-74290030 | None:intergenic | 25.0% |
| ! | ATCCAAGGTTTAATATCAAA+AGG | + | chr5.2:74288337-74288356 | None:intergenic | 25.0% |
| ! | ATGTAGCGTTTAAAAAGAAT+GGG | + | chr5.2:74289934-74289953 | None:intergenic | 25.0% |
| ! | ATTGTGGATGAAAAAAAATG+TGG | + | chr5.2:74289593-74289612 | None:intergenic | 25.0% |
| ! | CAAAACGAAAACATAAACTA+AGG | + | chr5.2:74288717-74288736 | None:intergenic | 25.0% |
| ! | TATCAAACATCAATTCTTAG+GGG | - | chr5.2:74288600-74288619 | MS.gene016853:intron | 25.0% |
| ! | TATTTATCAGGAACTCAATT+TGG | - | chr5.2:74290103-74290122 | MS.gene016853:intron | 25.0% |
| ! | TTGAGTTCCTGATAAATAAT+TGG | + | chr5.2:74290101-74290120 | None:intergenic | 25.0% |
| ! | TTGTAATTGAATTGTTTCCT+AGG | - | chr5.2:74289034-74289053 | MS.gene016853:CDS | 25.0% |
| ! | TTTAGCATACAAAACTACAA+AGG | + | chr5.2:74289007-74289026 | None:intergenic | 25.0% |
| !! | AAGCCAGAAAAATTTGAAAT+TGG | - | chr5.2:74289110-74289129 | MS.gene016853:intron | 25.0% |
| !! | ATGTTTTCGTTTTGTAGTTT+GGG | - | chr5.2:74288723-74288742 | MS.gene016853:intron | 25.0% |
| !! | ATTTAGTTCGGATTGTTAAA+CGG | + | chr5.2:74288094-74288113 | None:intergenic | 25.0% |
| !! | TATGTTTTCGTTTTGTAGTT+TGG | - | chr5.2:74288722-74288741 | MS.gene016853:intron | 25.0% |
| !! | TTCCTTTTGATATTAAACCT+TGG | - | chr5.2:74288332-74288351 | MS.gene016853:intron | 25.0% |
| !!! | AAAATTGGTGTTTTGATTTC+AGG | - | chr5.2:74289774-74289793 | MS.gene016853:intron | 25.0% |
| !!! | AAATTGGTGTTTTGATTTCA+GGG | - | chr5.2:74289775-74289794 | MS.gene016853:intron | 25.0% |
| !!! | AGTTATGTTTTAATGAGTCA+TGG | + | chr5.2:74287155-74287174 | None:intergenic | 25.0% |
| !!! | GTTATGTTTTAATGAGTCAT+GGG | + | chr5.2:74287154-74287173 | None:intergenic | 25.0% |
| !!! | TATCATTTTTTGGAAAATGC+AGG | - | chr5.2:74287500-74287519 | MS.gene016853:intron | 25.0% |
| AATATCGCGTTAAACAGAAT+TGG | + | chr5.2:74288007-74288026 | None:intergenic | 30.0% | |
| ACAATCCGAACTAAATATGT+TGG | - | chr5.2:74288098-74288117 | MS.gene016853:intron | 30.0% | |
| ACTAGATTCACTGATCTAAA+TGG | - | chr5.2:74288373-74288392 | MS.gene016853:intron | 30.0% | |
| ACTTATTTGAGCTTCTCTAT+TGG | - | chr5.2:74288759-74288778 | MS.gene016853:intron | 30.0% | |
| AGATTAGTAATCGGCAAAAT+CGG | + | chr5.2:74289516-74289535 | None:intergenic | 30.0% | |
| ATAGAGAAGCTCAAATAAGT+CGG | + | chr5.2:74288759-74288778 | None:intergenic | 30.0% | |
| ATTATCCTTGGAAAAATTGC+AGG | + | chr5.2:74287654-74287673 | None:intergenic | 30.0% | |
| ATTTAGATCAGTGAATCTAG+TGG | + | chr5.2:74288374-74288393 | None:intergenic | 30.0% | |
| CAAAAGGAAACTTTGAACAA+AGG | + | chr5.2:74288321-74288340 | None:intergenic | 30.0% | |
| CATGTAGCGTTTAAAAAGAA+TGG | + | chr5.2:74289935-74289954 | None:intergenic | 30.0% | |
| CTCATTTCCTAATTAGGTAA+AGG | - | chr5.2:74287751-74287770 | MS.gene016853:intron | 30.0% | |
| GAAGTAACAGAAGTTACAAA+GGG | - | chr5.2:74288226-74288245 | MS.gene016853:CDS | 30.0% | |
| GTTAGCTCAAATAATGAAAG+TGG | + | chr5.2:74287969-74287988 | None:intergenic | 30.0% | |
| GTTGTTCTCATAGACTATTA+TGG | + | chr5.2:74288858-74288877 | None:intergenic | 30.0% | |
| TAATTGAATTGTTTCCTAGG+TGG | - | chr5.2:74289037-74289056 | MS.gene016853:CDS | 30.0% | |
| TGAAAAAAAATGTGGTTGGA+AGG | + | chr5.2:74289585-74289604 | None:intergenic | 30.0% | |
| TGAGACCAACATATTTAGTT+CGG | + | chr5.2:74288106-74288125 | None:intergenic | 30.0% | |
| TGGATGAAAAAAAATGTGGT+TGG | + | chr5.2:74289589-74289608 | None:intergenic | 30.0% | |
| TGGGGAAAAACAATTATGTT+AGG | - | chr5.2:74289799-74289818 | MS.gene016853:CDS | 30.0% | |
| TTGCACACAAATGAAGAATA+TGG | + | chr5.2:74289705-74289724 | None:intergenic | 30.0% | |
| TTTCCTAATTAGGTAAAGGA+AGG | - | chr5.2:74287755-74287774 | MS.gene016853:intron | 30.0% | |
| ! | AAAACTACAAAGGTTTTGCT+TGG | + | chr5.2:74288997-74289016 | None:intergenic | 30.0% |
| ! | AAACTTGTTCGCTGAATAAA+GGG | + | chr5.2:74289253-74289272 | None:intergenic | 30.0% |
| ! | ATTTGCAAATTTTGTAGCTG+CGG | - | chr5.2:74287368-74287387 | MS.gene016853:CDS | 30.0% |
| ! | CATTCTTTTTAAACGCTACA+TGG | - | chr5.2:74289933-74289952 | MS.gene016853:intron | 30.0% |
| ! | GATTATTGCTTTGAATGTGT+TGG | - | chr5.2:74289357-74289376 | MS.gene016853:intron | 30.0% |
| ! | GCAATTTTTCCAAGGATAAT+GGG | - | chr5.2:74287654-74287673 | MS.gene016853:intron | 30.0% |
| ! | TACTTGTTGAAAGAATGGAT+TGG | - | chr5.2:74289751-74289770 | MS.gene016853:intron | 30.0% |
| ! | TGCAATTTTTCCAAGGATAA+TGG | - | chr5.2:74287653-74287672 | MS.gene016853:intron | 30.0% |
| !! | GAAAGAATGGATTGGAAAAT+TGG | - | chr5.2:74289759-74289778 | MS.gene016853:intron | 30.0% |
| !! | TCAAAAATTGGTAACGATGA+AGG | + | chr5.2:74288058-74288077 | None:intergenic | 30.0% |
| !!! | GCTTTTGATTTGTTGACAAA+AGG | - | chr5.2:74290170-74290189 | MS.gene016853:intron | 30.0% |
| !!! | GTCACAGTGATATCATTTTT+TGG | - | chr5.2:74287490-74287509 | MS.gene016853:CDS | 30.0% |
| !!! | TAGTTTTAGTGAGTATACTG+TGG | - | chr5.2:74288426-74288445 | MS.gene016853:intron | 30.0% |
| !!! | TTTTTTTCATCCACAATGCT+TGG | - | chr5.2:74289596-74289615 | MS.gene016853:intron | 30.0% |
| AAAACAGCAAATGTTGAACC+GGG | - | chr5.2:74288637-74288656 | MS.gene016853:CDS | 35.0% | |
| AAACATCAATTCTTAGGGGT+AGG | - | chr5.2:74288604-74288623 | MS.gene016853:CDS | 35.0% | |
| AAGATCTCCTCAATAATCAG+TGG | + | chr5.2:74287414-74287433 | None:intergenic | 35.0% | |
| ACACACACCTTTACATCTTA+TGG | + | chr5.2:74287123-74287142 | None:intergenic | 35.0% | |
| ACTCTTATGGGGTCTATATT+TGG | - | chr5.2:74289883-74289902 | MS.gene016853:CDS | 35.0% | |
| AGCATATGCTTCATGTAGAA+AGG | - | chr5.2:74289401-74289420 | MS.gene016853:intron | 35.0% | |
| AGTTGGCAGAGATTAGTAAT+CGG | + | chr5.2:74289525-74289544 | None:intergenic | 35.0% | |
| CAACAACCCATAAGATGTAA+AGG | - | chr5.2:74287113-74287132 | MS.gene016853:CDS | 35.0% | |
| CACACACCTTTACATCTTAT+GGG | + | chr5.2:74287122-74287141 | None:intergenic | 35.0% | |
| CATAGTTATCCCAATCTTCA+TGG | - | chr5.2:74288252-74288271 | MS.gene016853:intron | 35.0% | |
| CTTCCTTCCTTTACCTAATT+AGG | + | chr5.2:74287761-74287780 | None:intergenic | 35.0% | |
| CTTTATTCAGCGAACAAGTT+TGG | - | chr5.2:74289252-74289271 | MS.gene016853:intron | 35.0% | |
| CTTTGTAAATCCTGGAGAAT+TGG | - | chr5.2:74289284-74289303 | MS.gene016853:intron | 35.0% | |
| GAAAACAGCAAATGTTGAAC+CGG | - | chr5.2:74288636-74288655 | MS.gene016853:CDS | 35.0% | |
| GATACTTTGCACCAATAACA+TGG | + | chr5.2:74289491-74289510 | None:intergenic | 35.0% | |
| GATTATTGAGGAGATCTTTG+TGG | - | chr5.2:74287416-74287435 | MS.gene016853:CDS | 35.0% | |
| GGAAGTAACAGAAGTTACAA+AGG | - | chr5.2:74288225-74288244 | MS.gene016853:CDS | 35.0% | |
| GTATCATATCTAAGCATCCA+AGG | + | chr5.2:74288352-74288371 | None:intergenic | 35.0% | |
| GTTATCATAGAGATGACTGA+TGG | - | chr5.2:74289327-74289346 | MS.gene016853:intron | 35.0% | |
| TAAGAGTCTTCCCTTGAAAA+AGG | + | chr5.2:74289870-74289889 | None:intergenic | 35.0% | |
| TCAACAGGTATGCAAATTCA+AGG | - | chr5.2:74288523-74288542 | MS.gene016853:intron | 35.0% | |
| TGGATCAATCTTGAGTAGAT+TGG | + | chr5.2:74288461-74288480 | None:intergenic | 35.0% | |
| TTGATACTCAACTTAGATCC+TGG | + | chr5.2:74289835-74289854 | None:intergenic | 35.0% | |
| TTTATTCTACCCTGTTTGTG+TGG | - | chr5.2:74287787-74287806 | MS.gene016853:intron | 35.0% | |
| TTTCAAGGGAAGACTCTTAT+GGG | - | chr5.2:74289871-74289890 | MS.gene016853:CDS | 35.0% | |
| ! | AACTTGTTCGCTGAATAAAG+GGG | + | chr5.2:74289252-74289271 | None:intergenic | 35.0% |
| ! | CAAACTTGTTCGCTGAATAA+AGG | + | chr5.2:74289254-74289273 | None:intergenic | 35.0% |
| ! | CTGCATACTTGTTGAAAGAA+TGG | - | chr5.2:74289746-74289765 | MS.gene016853:intron | 35.0% |
| ! | CTTTACATCTTATGGGTTGT+TGG | + | chr5.2:74287115-74287134 | None:intergenic | 35.0% |
| ! | GGATGATTTTGTTACACATG+AGG | - | chr5.2:74290124-74290143 | MS.gene016853:intron | 35.0% |
| ! | TGATTTTGTTACACATGAGG+TGG | - | chr5.2:74290127-74290146 | MS.gene016853:intron | 35.0% |
| ! | TTGCTTTGAATGTGTTGGTA+TGG | - | chr5.2:74289362-74289381 | MS.gene016853:intron | 35.0% |
| ! | TTTTAAACGCTACATGGACA+AGG | - | chr5.2:74289939-74289958 | MS.gene016853:intron | 35.0% |
| !! | GATTTGTTTTCCAATTCTCC+AGG | + | chr5.2:74289297-74289316 | None:intergenic | 35.0% |
| !! | TTTTCAAGGGAAGACTCTTA+TGG | - | chr5.2:74289870-74289889 | MS.gene016853:CDS | 35.0% |
| !!! | AGTACTGATGTCCTTTTTCA+AGG | - | chr5.2:74289856-74289875 | MS.gene016853:CDS | 35.0% |
| !!! | GTACTGATGTCCTTTTTCAA+GGG | - | chr5.2:74289857-74289876 | MS.gene016853:CDS | 35.0% |
| AAACAGCAAATGTTGAACCG+GGG | - | chr5.2:74288638-74288657 | MS.gene016853:CDS | 40.0% | |
| AAGAATGGGTACATCAGACT+TGG | + | chr5.2:74289920-74289939 | None:intergenic | 40.0% | |
| AGAATGGGTACATCAGACTT+GGG | + | chr5.2:74289919-74289938 | None:intergenic | 40.0% | |
| AGCAACTAGGATTATAGGTG+TGG | - | chr5.2:74289082-74289101 | MS.gene016853:CDS | 40.0% | |
| AGTGTATGACCACACAAACA+GGG | + | chr5.2:74287799-74287818 | None:intergenic | 40.0% | |
| ATACGAATCCTAGCTTCATG+TGG | + | chr5.2:74287453-74287472 | None:intergenic | 40.0% | |
| ATCATAGAGATGACTGATGG+AGG | - | chr5.2:74289330-74289349 | MS.gene016853:intron | 40.0% | |
| ATCCTTGGAAAAATTGCAGG+AGG | + | chr5.2:74287651-74287670 | None:intergenic | 40.0% | |
| CACAATCAGCCATGAAGATT+GGG | + | chr5.2:74288264-74288283 | None:intergenic | 40.0% | |
| CTCACATTGGCAAAGTTCTT+AGG | - | chr5.2:74287920-74287939 | MS.gene016853:CDS | 40.0% | |
| CTTATGGGGTCTATATTTGG+AGG | - | chr5.2:74289886-74289905 | MS.gene016853:CDS | 40.0% | |
| CTTCGCTCACTCTCAAAAAT+TGG | + | chr5.2:74288070-74288089 | None:intergenic | 40.0% | |
| GATATCACTGTGACAAAGAG+AGG | + | chr5.2:74287484-74287503 | None:intergenic | 40.0% | |
| GGAAAACAAATCTGTGAGTC+AGG | - | chr5.2:74289305-74289324 | MS.gene016853:intron | 40.0% | |
| GTCACAGACTTTGTAAATCC+TGG | - | chr5.2:74289276-74289295 | MS.gene016853:intron | 40.0% | |
| GTTGCATTTGTGTCTCACAT+TGG | - | chr5.2:74287907-74287926 | MS.gene016853:CDS | 40.0% | |
| TCAAATAAGTCGGTCCAAAC+AGG | + | chr5.2:74288749-74288768 | None:intergenic | 40.0% | |
| TCACAATCAGCCATGAAGAT+TGG | + | chr5.2:74288265-74288284 | None:intergenic | 40.0% | |
| TGGAAGGATAGACTCCATAA+GGG | + | chr5.2:74289569-74289588 | None:intergenic | 40.0% | |
| TGTGGAGCAACTAGGATTAT+AGG | - | chr5.2:74289077-74289096 | MS.gene016853:CDS | 40.0% | |
| TTCAAGGGAAGACTCTTATG+GGG | - | chr5.2:74289872-74289891 | MS.gene016853:CDS | 40.0% | |
| TTGGAAGGATAGACTCCATA+AGG | + | chr5.2:74289570-74289589 | None:intergenic | 40.0% | |
| ! | ACTCGGATGTATTGGATTAG+CGG | - | chr5.2:74288681-74288700 | MS.gene016853:intron | 40.0% |
| ! | ATGTGTTGGTATGGCATCAT+TGG | - | chr5.2:74289371-74289390 | MS.gene016853:intron | 40.0% |
| ! | TAATGGGTCATGAGGCAATT+GGG | - | chr5.2:74287670-74287689 | MS.gene016853:intron | 40.0% |
| ! | TTTTATGTGATCCAGGGTTG+TGG | - | chr5.2:74288189-74288208 | MS.gene016853:CDS | 40.0% |
| ! | TTTTGTAGTTTGGGCCTGTT+TGG | - | chr5.2:74288732-74288751 | MS.gene016853:intron | 40.0% |
| !! | ATAATGGGTCATGAGGCAAT+TGG | - | chr5.2:74287669-74287688 | MS.gene016853:intron | 40.0% |
| !! | GATGTATTGGATTAGCGGTA+TGG | - | chr5.2:74288686-74288705 | MS.gene016853:intron | 40.0% |
| !! | GTTTTTGGACTCGGATGTAT+TGG | - | chr5.2:74288673-74288692 | MS.gene016853:intron | 40.0% |
| !! | TGACAAAAGGAGAGTGTCTT+CGG | - | chr5.2:74290183-74290202 | MS.gene016853:CDS | 40.0% |
| !!! | ACAGTAGCTGTTTTTGGACT+CGG | - | chr5.2:74288664-74288683 | MS.gene016853:CDS | 40.0% |
| !!! | GGTGTTTTGATTTCAGGGTT+GGG | - | chr5.2:74289780-74289799 | MS.gene016853:intron | 40.0% |
| !!! | GTGTTTTGATTTCAGGGTTG+GGG | - | chr5.2:74289781-74289800 | MS.gene016853:intron | 40.0% |
| !!! | TGGTGTTTTGATTTCAGGGT+TGG | - | chr5.2:74289779-74289798 | MS.gene016853:intron | 40.0% |
| AAGGATAGACTCCATAAGGG+TGG | + | chr5.2:74289566-74289585 | None:intergenic | 45.0% | |
| ATCCTAGCTTCATGTGGCAT+TGG | + | chr5.2:74287447-74287466 | None:intergenic | 45.0% | |
| ATTGTTTCCTAGGTGGCTGA+AGG | - | chr5.2:74289044-74289063 | MS.gene016853:CDS | 45.0% | |
| CAAAGTTGCATTAGTCCGAG+TGG | + | chr5.2:74289657-74289676 | None:intergenic | 45.0% | |
| CAACTAGACACCATGACAGT+TGG | + | chr5.2:74289542-74289561 | None:intergenic | 45.0% | |
| CAACTGTCATGGTGTCTAGT+TGG | - | chr5.2:74289540-74289559 | MS.gene016853:intron | 45.0% | |
| CACTCGGACTAATGCAACTT+TGG | - | chr5.2:74289655-74289674 | MS.gene016853:intron | 45.0% | |
| CTAATCTCTGCCAACTGTCA+TGG | - | chr5.2:74289529-74289548 | MS.gene016853:intron | 45.0% | |
| CTAGACTTTGTGGAGCAACT+AGG | - | chr5.2:74289069-74289088 | MS.gene016853:CDS | 45.0% | |
| CTCAGTTGTGGTGTATCAAC+AGG | - | chr5.2:74288508-74288527 | MS.gene016853:intron | 45.0% | |
| CTGTTGATACACCACAACTG+AGG | + | chr5.2:74288510-74288529 | None:intergenic | 45.0% | |
| GAGTGTATGACCACACAAAC+AGG | + | chr5.2:74287800-74287819 | None:intergenic | 45.0% | |
| GATCTCTCAAGCAAGGTTTC+GGG | + | chr5.2:74289623-74289642 | None:intergenic | 45.0% | |
| GGATCTCTCAAGCAAGGTTT+CGG | + | chr5.2:74289624-74289643 | None:intergenic | 45.0% | |
| TCAATAATCAGTGGCTCACC+TGG | + | chr5.2:74287405-74287424 | None:intergenic | 45.0% | |
| TTGATACACCACAACTGAGG+AGG | + | chr5.2:74288507-74288526 | None:intergenic | 45.0% | |
| TTGTTAACTACGTGCATGCG+TGG | + | chr5.2:74287822-74287841 | None:intergenic | 45.0% | |
| TTGTTCGCTGAATAAAGGGG+AGG | + | chr5.2:74289249-74289268 | None:intergenic | 45.0% | |
| ! | AGCCTCCTGCAATTTTTCCA+AGG | - | chr5.2:74287646-74287665 | MS.gene016853:intron | 45.0% |
| ! | AGGTGAGCCACTGATTATTG+AGG | - | chr5.2:74287404-74287423 | MS.gene016853:CDS | 45.0% |
| ! | AGTGTCTTCGGTGTGTGATT+TGG | - | chr5.2:74290195-74290214 | MS.gene016853:CDS | 45.0% |
| ! | TCTTCGGTGTGTGATTTGGA+TGG | - | chr5.2:74290199-74290218 | MS.gene016853:CDS | 45.0% |
| !! | TCCAAGGATAATGGGTCATG+AGG | - | chr5.2:74287662-74287681 | MS.gene016853:intron | 45.0% |
| AAAACAGCTACTGTCGACCC+CGG | + | chr5.2:74288658-74288677 | None:intergenic | 50.0% | |
| ATCCAACAATTCCGCCCAAC+AGG | - | chr5.2:74288476-74288495 | MS.gene016853:intron | 50.0% | |
| ATGTTAGGAGTGGACAAGCC+AGG | - | chr5.2:74289814-74289833 | MS.gene016853:CDS | 50.0% | |
| CACCAATGCCACATGAAGCT+AGG | - | chr5.2:74287442-74287461 | MS.gene016853:CDS | 50.0% | |
| GCCTCATGACCCATTATCCT+TGG | + | chr5.2:74287666-74287685 | None:intergenic | 50.0% | |
| GCTGAAGGAGCTAGACTTTG+TGG | - | chr5.2:74289059-74289078 | MS.gene016853:CDS | 50.0% | |
| TCCAACAATTCCGCCCAACA+GGG | - | chr5.2:74288477-74288496 | MS.gene016853:intron | 50.0% | |
| TCCAACACTTTCCACAACCC+TGG | + | chr5.2:74288203-74288222 | None:intergenic | 50.0% | |
| TGCATTAGTCCGAGTGGAAC+TGG | + | chr5.2:74289651-74289670 | None:intergenic | 50.0% | |
| TGTCTAGTTGGCCACCCTTA+TGG | - | chr5.2:74289552-74289571 | MS.gene016853:intron | 50.0% | |
| ! | CTAGCTTCATGTGGCATTGG+TGG | + | chr5.2:74287444-74287463 | None:intergenic | 50.0% |
| ! | TCCAGGGTTGTGGAAAGTGT+TGG | - | chr5.2:74288199-74288218 | MS.gene016853:CDS | 50.0% |
| !! | GGGTCGACAGTAGCTGTTTT+TGG | - | chr5.2:74288658-74288677 | MS.gene016853:CDS | 50.0% |
| !! | GGTTGTGGAAAGTGTTGGAG+AGG | - | chr5.2:74288204-74288223 | MS.gene016853:CDS | 50.0% |
| AGTCCGAGTGGAACTGGACT+CGG | + | chr5.2:74289645-74289664 | None:intergenic | 55.0% | |
| CCTGCTGCAGCAACAAGTGA+TGG | - | chr5.2:74287089-74287108 | MS.gene016853:CDS | 55.0% | |
| GATCCGAGTCCAGTTCCACT+CGG | - | chr5.2:74289639-74289658 | MS.gene016853:CDS | 55.0% | |
| GGACTCGGATCTCTCAAGCA+AGG | + | chr5.2:74289630-74289649 | None:intergenic | 55.0% | |
| ! | CCATCACTTGTTGCTGCAGC+AGG | + | chr5.2:74287092-74287111 | None:intergenic | 55.0% |
| ! | GGTTTCGGGTCCAAGCATTG+TGG | + | chr5.2:74289609-74289628 | None:intergenic | 55.0% |
| ! | TCTAGCTCCTTCAGCCACCT+AGG | + | chr5.2:74289054-74289073 | None:intergenic | 55.0% |
| ! | TCTTAGGGGTAGGTGCTGCA+TGG | - | chr5.2:74288614-74288633 | MS.gene016853:CDS | 55.0% |
| AGGGCATGCCTCCTCAGTTG+TGG | - | chr5.2:74288496-74288515 | MS.gene016853:intron | 60.0% | |
| GCCCTGTTGGGCGGAATTGT+TGG | + | chr5.2:74288481-74288500 | None:intergenic | 60.0% | |
| GCTGCGGTTTGTCGCAAACC+AGG | - | chr5.2:74287384-74287403 | MS.gene016853:CDS | 60.0% | |
| ! | ACTGAGGAGGCATGCCCTGT+TGG | + | chr5.2:74288494-74288513 | None:intergenic | 60.0% |
| ! | CTGAGGAGGCATGCCCTGTT+GGG | + | chr5.2:74288493-74288512 | None:intergenic | 60.0% |
| ! | AGGAGGCATGCCCTGTTGGG+CGG | + | chr5.2:74288490-74288509 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 74287077 | 74290229 | 74287077 | ID=MS.gene016853 |
| chr5.2 | mRNA | 74287077 | 74290229 | 74287077 | ID=MS.gene016853.t1;Parent=MS.gene016853 |
| chr5.2 | exon | 74290172 | 74290229 | 74290172 | ID=MS.gene016853.t1.exon1;Parent=MS.gene016853.t1 |
| chr5.2 | CDS | 74290172 | 74290229 | 74290172 | ID=cds.MS.gene016853.t1;Parent=MS.gene016853.t1 |
| chr5.2 | exon | 74289785 | 74289921 | 74289785 | ID=MS.gene016853.t1.exon2;Parent=MS.gene016853.t1 |
| chr5.2 | CDS | 74289785 | 74289921 | 74289785 | ID=cds.MS.gene016853.t1;Parent=MS.gene016853.t1 |
| chr5.2 | exon | 74289615 | 74289661 | 74289615 | ID=MS.gene016853.t1.exon3;Parent=MS.gene016853.t1 |
| chr5.2 | CDS | 74289615 | 74289661 | 74289615 | ID=cds.MS.gene016853.t1;Parent=MS.gene016853.t1 |
| chr5.2 | exon | 74288777 | 74289102 | 74288777 | ID=MS.gene016853.t1.exon4;Parent=MS.gene016853.t1 |
| chr5.2 | CDS | 74288777 | 74289102 | 74288777 | ID=cds.MS.gene016853.t1;Parent=MS.gene016853.t1 |
| chr5.2 | exon | 74288604 | 74288686 | 74288604 | ID=MS.gene016853.t1.exon5;Parent=MS.gene016853.t1 |
| chr5.2 | CDS | 74288604 | 74288686 | 74288604 | ID=cds.MS.gene016853.t1;Parent=MS.gene016853.t1 |
| chr5.2 | exon | 74288175 | 74288250 | 74288175 | ID=MS.gene016853.t1.exon6;Parent=MS.gene016853.t1 |
| chr5.2 | CDS | 74288175 | 74288250 | 74288175 | ID=cds.MS.gene016853.t1;Parent=MS.gene016853.t1 |
| chr5.2 | exon | 74287884 | 74288044 | 74287884 | ID=MS.gene016853.t1.exon7;Parent=MS.gene016853.t1 |
| chr5.2 | CDS | 74287884 | 74288044 | 74287884 | ID=cds.MS.gene016853.t1;Parent=MS.gene016853.t1 |
| chr5.2 | exon | 74287346 | 74287510 | 74287346 | ID=MS.gene016853.t1.exon8;Parent=MS.gene016853.t1 |
| chr5.2 | CDS | 74287346 | 74287510 | 74287346 | ID=cds.MS.gene016853.t1;Parent=MS.gene016853.t1 |
| chr5.2 | exon | 74287077 | 74287193 | 74287077 | ID=MS.gene016853.t1.exon9;Parent=MS.gene016853.t1 |
| chr5.2 | CDS | 74287077 | 74287193 | 74287077 | ID=cds.MS.gene016853.t1;Parent=MS.gene016853.t1 |
| Gene Sequence |
| Protein sequence |
