Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042841.t1 | XP_003619782.1 | 97.3 | 376 | 10 | 0 | 3 | 378 | 2 | 377 | 7.90E-212 | 746.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042841.t1 | Q8LEB2 | 78.0 | 377 | 83 | 0 | 2 | 378 | 5 | 381 | 6.0e-176 | 618.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042841.t1 | G7KPC5 | 97.3 | 376 | 10 | 0 | 3 | 378 | 2 | 377 | 5.7e-212 | 746.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene33522 | MS.gene042841 | PPI |
| MS.gene77336 | MS.gene042841 | PPI |
| MS.gene02488 | MS.gene042841 | PPI |
| MS.gene013678 | MS.gene042841 | PPI |
| MS.gene013671 | MS.gene042841 | PPI |
| MS.gene78434 | MS.gene042841 | PPI |
| MS.gene77335 | MS.gene042841 | PPI |
| MS.gene81957 | MS.gene042841 | PPI |
| MS.gene81956 | MS.gene042841 | PPI |
| MS.gene044229 | MS.gene042841 | PPI |
| MS.gene030545 | MS.gene042841 | PPI |
| MS.gene042841 | MS.gene038047 | PPI |
| MS.gene02655 | MS.gene042841 | PPI |
| MS.gene84205 | MS.gene042841 | PPI |
| MS.gene050322 | MS.gene042841 | PPI |
| MS.gene007227 | MS.gene042841 | PPI |
| MS.gene02654 | MS.gene042841 | PPI |
| MS.gene84204 | MS.gene042841 | PPI |
| MS.gene39827 | MS.gene042841 | PPI |
| MS.gene37836 | MS.gene042841 | PPI |
| MS.gene044228 | MS.gene042841 | PPI |
| MS.gene78435 | MS.gene042841 | PPI |
| MS.gene042841 | MS.gene02651 | PPI |
| MS.gene042841 | MS.gene70145 | PPI |
| MS.gene016853 | MS.gene042841 | PPI |
| MS.gene49741 | MS.gene042841 | PPI |
| MS.gene074415 | MS.gene042841 | PPI |
| MS.gene81954 | MS.gene042841 | PPI |
| MS.gene73688 | MS.gene042841 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042841.t1 | MTR_6g068930 | 97.340 | 376 | 10 | 0 | 3 | 378 | 2 | 377 | 0.0 | 748 |
| MS.gene042841.t1 | MTR_3g089940 | 52.255 | 377 | 176 | 2 | 4 | 376 | 2 | 378 | 4.82e-144 | 414 |
| MS.gene042841.t1 | MTR_1g069430 | 53.226 | 372 | 170 | 2 | 9 | 376 | 6 | 377 | 2.50e-143 | 412 |
| MS.gene042841.t1 | MTR_3g089977 | 51.194 | 377 | 180 | 2 | 4 | 376 | 2 | 378 | 6.34e-143 | 410 |
| MS.gene042841.t1 | MTR_3g089940 | 51.459 | 377 | 179 | 2 | 4 | 376 | 2 | 378 | 9.91e-143 | 410 |
| MS.gene042841.t1 | MTR_7g099040 | 52.381 | 378 | 176 | 2 | 3 | 376 | 2 | 379 | 1.00e-142 | 410 |
| MS.gene042841.t1 | MTR_3g089970 | 50.794 | 378 | 182 | 2 | 3 | 376 | 2 | 379 | 4.67e-141 | 406 |
| MS.gene042841.t1 | MTR_5g087710 | 50.131 | 383 | 185 | 4 | 2 | 378 | 9 | 391 | 2.20e-129 | 377 |
| MS.gene042841.t1 | MTR_3g089940 | 53.097 | 339 | 155 | 2 | 4 | 338 | 2 | 340 | 8.72e-128 | 371 |
| MS.gene042841.t1 | MTR_3g089940 | 52.212 | 339 | 158 | 2 | 4 | 338 | 2 | 340 | 1.85e-126 | 368 |
| MS.gene042841.t1 | MTR_7g068320 | 49.479 | 384 | 180 | 6 | 4 | 376 | 13 | 393 | 1.85e-124 | 364 |
| MS.gene042841.t1 | MTR_7g068330 | 48.691 | 382 | 189 | 3 | 2 | 376 | 4 | 385 | 1.94e-123 | 361 |
| MS.gene042841.t1 | MTR_3g079180 | 47.396 | 384 | 194 | 5 | 1 | 376 | 1 | 384 | 3.89e-121 | 355 |
| MS.gene042841.t1 | MTR_3g099460 | 51.070 | 374 | 175 | 3 | 11 | 376 | 16 | 389 | 7.67e-117 | 345 |
| MS.gene042841.t1 | MTR_3g099460 | 51.240 | 363 | 169 | 3 | 22 | 376 | 20 | 382 | 1.81e-113 | 336 |
| MS.gene042841.t1 | MTR_3g099460 | 51.724 | 319 | 151 | 2 | 61 | 376 | 8 | 326 | 9.07e-99 | 296 |
| MS.gene042841.t1 | MTR_5g045710 | 41.799 | 378 | 209 | 6 | 5 | 376 | 2 | 374 | 3.00e-98 | 297 |
| MS.gene042841.t1 | MTR_0001s0660 | 40.691 | 376 | 215 | 4 | 5 | 376 | 2 | 373 | 1.17e-96 | 296 |
| MS.gene042841.t1 | MTR_3g099460 | 53.381 | 281 | 123 | 3 | 11 | 283 | 16 | 296 | 2.77e-83 | 257 |
| MS.gene042841.t1 | MTR_3g099460 | 53.704 | 270 | 117 | 3 | 22 | 283 | 20 | 289 | 6.31e-80 | 248 |
| MS.gene042841.t1 | MTR_3g079170 | 45.126 | 277 | 128 | 5 | 96 | 367 | 24 | 281 | 1.83e-76 | 238 |
| MS.gene042841.t1 | MTR_5g045710 | 40.541 | 296 | 167 | 5 | 85 | 376 | 1 | 291 | 7.72e-69 | 218 |
| MS.gene042841.t1 | MTR_8g095220 | 29.333 | 375 | 248 | 11 | 14 | 376 | 55 | 424 | 1.21e-34 | 132 |
| MS.gene042841.t1 | MTR_8g095220 | 31.102 | 254 | 161 | 8 | 14 | 256 | 55 | 305 | 5.84e-26 | 106 |
| MS.gene042841.t1 | MTR_6g465010 | 27.467 | 375 | 206 | 14 | 18 | 367 | 3 | 336 | 1.89e-20 | 91.7 |
| MS.gene042841.t1 | MTR_6g466320 | 27.467 | 375 | 206 | 14 | 18 | 367 | 19 | 352 | 2.32e-20 | 91.7 |
| MS.gene042841.t1 | MTR_6g465010 | 27.467 | 375 | 206 | 14 | 18 | 367 | 19 | 352 | 2.32e-20 | 91.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042841.t1 | AT5G24760 | 77.690 | 381 | 82 | 1 | 1 | 378 | 1 | 381 | 0.0 | 624 |
| MS.gene042841.t1 | AT5G24760 | 78.409 | 352 | 76 | 0 | 27 | 378 | 1 | 352 | 0.0 | 589 |
| MS.gene042841.t1 | AT5G24760 | 78.409 | 352 | 76 | 0 | 27 | 378 | 1 | 352 | 0.0 | 589 |
| MS.gene042841.t1 | AT5G24760 | 77.903 | 267 | 59 | 0 | 112 | 378 | 1 | 267 | 7.92e-160 | 449 |
| MS.gene042841.t1 | AT1G77120 | 53.846 | 377 | 168 | 3 | 5 | 376 | 2 | 377 | 5.61e-148 | 424 |
| MS.gene042841.t1 | AT5G43940 | 53.476 | 374 | 170 | 2 | 9 | 378 | 6 | 379 | 7.23e-144 | 413 |
| MS.gene042841.t1 | AT5G43940 | 51.554 | 386 | 171 | 3 | 9 | 378 | 6 | 391 | 1.04e-139 | 403 |
| MS.gene042841.t1 | AT1G64710 | 50.133 | 375 | 180 | 3 | 9 | 376 | 6 | 380 | 1.54e-132 | 384 |
| MS.gene042841.t1 | AT5G42250 | 48.953 | 382 | 188 | 5 | 2 | 376 | 8 | 389 | 1.69e-125 | 367 |
| MS.gene042841.t1 | AT1G32780 | 44.271 | 384 | 200 | 3 | 9 | 378 | 7 | 390 | 4.73e-122 | 358 |
| MS.gene042841.t1 | AT4G22110 | 50.529 | 378 | 174 | 4 | 11 | 378 | 15 | 389 | 7.66e-121 | 355 |
| MS.gene042841.t1 | AT4G22110 | 50.529 | 378 | 174 | 4 | 11 | 378 | 15 | 389 | 7.66e-121 | 355 |
| MS.gene042841.t1 | AT1G22430 | 49.096 | 387 | 180 | 5 | 4 | 378 | 7 | 388 | 1.02e-120 | 355 |
| MS.gene042841.t1 | AT1G22430 | 49.096 | 387 | 180 | 5 | 4 | 378 | 7 | 388 | 1.02e-120 | 355 |
| MS.gene042841.t1 | AT1G64710 | 48.179 | 357 | 178 | 3 | 27 | 376 | 1 | 357 | 1.19e-120 | 353 |
| MS.gene042841.t1 | AT1G22440 | 49.735 | 378 | 177 | 4 | 11 | 378 | 12 | 386 | 2.98e-120 | 353 |
| MS.gene042841.t1 | AT1G64710 | 47.059 | 306 | 159 | 2 | 74 | 376 | 6 | 311 | 1.50e-97 | 293 |
| MS.gene042841.t1 | AT1G22430 | 47.284 | 313 | 141 | 6 | 4 | 304 | 7 | 307 | 1.93e-88 | 270 |
| MS.gene042841.t1 | AT1G22430 | 50.588 | 255 | 110 | 4 | 4 | 247 | 7 | 256 | 7.55e-79 | 244 |
| MS.gene042841.t1 | AT1G22430 | 50.588 | 255 | 110 | 4 | 4 | 247 | 7 | 256 | 7.55e-79 | 244 |
| MS.gene042841.t1 | AT4G22110 | 52.439 | 246 | 105 | 3 | 11 | 247 | 15 | 257 | 4.41e-78 | 242 |
| MS.gene042841.t1 | AT5G63620 | 29.268 | 369 | 239 | 13 | 14 | 368 | 57 | 417 | 3.46e-32 | 125 |
| MS.gene042841.t1 | AT5G63620 | 28.610 | 367 | 244 | 12 | 14 | 368 | 57 | 417 | 6.37e-32 | 125 |
| MS.gene042841.t1 | AT5G63620 | 30.980 | 255 | 161 | 9 | 14 | 257 | 57 | 307 | 2.06e-25 | 105 |
| MS.gene042841.t1 | AT5G51970 | 25.429 | 350 | 206 | 12 | 37 | 367 | 41 | 354 | 2.38e-17 | 83.2 |
| MS.gene042841.t1 | AT5G51970 | 25.429 | 350 | 206 | 12 | 37 | 367 | 41 | 354 | 2.38e-17 | 83.2 |
Find 91 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGACAAGATTTACAGTAAA+AGG | 0.163487 | 6.3:-66242370 | MS.gene042841:CDS |
| AACTAATATTTGTCAAGTTT+TGG | 0.171217 | 6.3:-66242428 | MS.gene042841:CDS |
| GCCATATTTCCTCGCATATT+TGG | 0.189832 | 6.3:-66243233 | MS.gene042841:CDS |
| ACCATTGGAGATTAGGATTA+AGG | 0.205928 | 6.3:-66244315 | MS.gene042841:CDS |
| GCCAAATATGCGAGGAAATA+TGG | 0.248039 | 6.3:+66243232 | None:intergenic |
| CTGACAGGAAGAACTTTAAA+AGG | 0.257915 | 6.3:-66240946 | MS.gene042841:CDS |
| TACCACACAGCTAAATCTTT+TGG | 0.263883 | 6.3:-66241444 | MS.gene042841:intron |
| GGATCCACAGTGGTTATATT+TGG | 0.292524 | 6.3:-66241848 | MS.gene042841:CDS |
| AGGGGTGCATCTAGAATAAT+TGG | 0.320329 | 6.3:-66241596 | MS.gene042841:CDS |
| AATCCACAGAAGTGTGAAAA+TGG | 0.320595 | 6.3:-66241563 | MS.gene042841:intron |
| GGAACTGCACTCACCTTTGC+AGG | 0.322567 | 6.3:+66244505 | None:intergenic |
| GAATACACAGTTGTTCATTC+TGG | 0.335258 | 6.3:-66242307 | MS.gene042841:CDS |
| CTCCTCAACCATTGGAGATT+AGG | 0.340698 | 6.3:-66244322 | MS.gene042841:CDS |
| TCTAGATGCACCCCTTAGTT+TGG | 0.343778 | 6.3:+66241604 | None:intergenic |
| CCTGAGATGTCAGCTCATTA+TGG | 0.348801 | 6.3:-66240976 | MS.gene042841:CDS |
| ACTTTAAAAGGATCTTTATT+CGG | 0.356032 | 6.3:-66240934 | MS.gene042841:CDS |
| GACATCTCAGGCTTCACCTT+TGG | 0.385095 | 6.3:+66240988 | None:intergenic |
| TCATGCAGGCTGTGCAAATC+AGG | 0.386476 | 6.3:-66242454 | MS.gene042841:CDS |
| TCGTAGTGATCTTTCTGCTT+GGG | 0.388667 | 6.3:-66244273 | MS.gene042841:CDS |
| ATATTTGGCCACGAAGCATC+TGG | 0.392686 | 6.3:-66243218 | MS.gene042841:CDS |
| GGCATTGGTGATGGAGGAAG+TGG | 0.403806 | 6.3:-66244354 | MS.gene042841:CDS |
| CTTAGCTGTGGGGTTTCTGC+AGG | 0.404405 | 6.3:-66242235 | MS.gene042841:intron |
| TTGCGCAAGGGGCCAAACTA+AGG | 0.404409 | 6.3:-66241616 | MS.gene042841:CDS |
| CAAAATTCAAGGAATTATCT+TGG | 0.409845 | 6.3:+66240165 | None:intergenic |
| CTTTGCAGGTTATGACTTGA+GGG | 0.413577 | 6.3:+66244519 | None:intergenic |
| ATATTTGGTCTTGGAACTGT+TGG | 0.421795 | 6.3:-66241833 | MS.gene042841:CDS |
| GTGTTATGTAGTCATCAATC+TGG | 0.423973 | 6.3:+66240268 | None:intergenic |
| ACACCGCAATAATGATAAAC+AGG | 0.427206 | 6.3:+66242343 | None:intergenic |
| CCTTTGCAGGTTATGACTTG+AGG | 0.431283 | 6.3:+66244518 | None:intergenic |
| ACAGTGGTTATATTTGGTCT+TGG | 0.438849 | 6.3:-66241842 | MS.gene042841:CDS |
| CCATAATGAGCTGACATCTC+AGG | 0.446817 | 6.3:+66240976 | None:intergenic |
| GTCGTAGTGATCTTTCTGCT+TGG | 0.448380 | 6.3:-66244274 | MS.gene042841:CDS |
| CCTTGTTTACAACAGGGGTG+GGG | 0.461095 | 6.3:-66241033 | MS.gene042841:intron |
| TGCGCAAGGGGCCAAACTAA+GGG | 0.472900 | 6.3:-66241615 | MS.gene042841:CDS |
| GCTGCAGTAGCATGGGGAGC+TGG | 0.479502 | 6.3:-66244380 | MS.gene042841:CDS |
| AGCTGGAGAGGCATTGGTGA+TGG | 0.483911 | 6.3:-66244363 | MS.gene042841:CDS |
| AGACAAGATTTACAGTAAAA+GGG | 0.484730 | 6.3:-66242369 | MS.gene042841:CDS |
| AAGGATCTTTATTCGGAGGA+TGG | 0.488243 | 6.3:-66240927 | MS.gene042841:CDS |
| ATGGGGAGCTGGAGAGGCAT+TGG | 0.489033 | 6.3:-66244369 | MS.gene042841:CDS |
| AAATATGCATTCTTAGCTGT+GGG | 0.493066 | 6.3:-66242246 | MS.gene042841:CDS |
| ACAAACAGCTGCAGTAGCAT+GGG | 0.502030 | 6.3:-66244387 | MS.gene042841:intron |
| GCAGGATTGTTGAGAGCGTA+GGG | 0.505817 | 6.3:-66242540 | MS.gene042841:intron |
| TGCAGGATTGTTGAGAGCGT+AGG | 0.508503 | 6.3:-66242541 | MS.gene042841:intron |
| ATTGTTGAGAGCGTAGGGCT+AGG | 0.509736 | 6.3:-66242535 | MS.gene042841:CDS |
| ATCCTAATCTCCAATGGTTG+AGG | 0.520022 | 6.3:+66244320 | None:intergenic |
| TAGGAGAATGCATGTCATGC+AGG | 0.520032 | 6.3:-66242468 | MS.gene042841:CDS |
| AGTCAGTCCTCCTCAACCAT+TGG | 0.520494 | 6.3:-66244330 | MS.gene042841:CDS |
| AACAAACAGCTGCAGTAGCA+TGG | 0.525473 | 6.3:-66244388 | MS.gene042841:intron |
| GAATAATCGACCTGCACGAT+AGG | 0.525925 | 6.3:+66241384 | None:intergenic |
| ATTAAGTGCATTACTGATGG+TGG | 0.526528 | 6.3:-66241270 | MS.gene042841:CDS |
| ACATACTTCTCTACTAATGA+AGG | 0.534955 | 6.3:+66240886 | None:intergenic |
| TAGATTACCCAGATGCTTCG+TGG | 0.537317 | 6.3:+66243210 | None:intergenic |
| GGAGTGACTGAATTCAAAGA+AGG | 0.538722 | 6.3:-66242514 | MS.gene042841:CDS |
| TTAAGTGCATTACTGATGGT+GGG | 0.539038 | 6.3:-66241269 | MS.gene042841:CDS |
| CATTATGGACTATTCCTGAC+AGG | 0.543387 | 6.3:-66240961 | MS.gene042841:CDS |
| TTAAAAGGATCTTTATTCGG+AGG | 0.548166 | 6.3:-66240931 | MS.gene042841:CDS |
| GCTTTCAATCTCATGAAAGA+AGG | 0.550205 | 6.3:-66240216 | MS.gene042841:CDS |
| GTTATTAAGTGCATTACTGA+TGG | 0.552179 | 6.3:-66241273 | MS.gene042841:CDS |
| AAAATATGCATTCTTAGCTG+TGG | 0.552327 | 6.3:-66242247 | MS.gene042841:CDS |
| CCTATTCAATAGGTTGCGCA+AGG | 0.566472 | 6.3:-66241629 | MS.gene042841:intron |
| GAGTGACTGAATTCAAAGAA+GGG | 0.576891 | 6.3:-66242513 | MS.gene042841:CDS |
| GTACAAAGAACCTATCGTGC+AGG | 0.585896 | 6.3:-66241394 | MS.gene042841:intron |
| AGTAGCATGGGGAGCTGGAG+AGG | 0.586768 | 6.3:-66244375 | MS.gene042841:CDS |
| TGGAGAGGCATTGGTGATGG+AGG | 0.587850 | 6.3:-66244360 | MS.gene042841:CDS |
| TAAGTGCATTACTGATGGTG+GGG | 0.591863 | 6.3:-66241268 | MS.gene042841:CDS |
| AAGCCTGTTTATCATTATTG+CGG | 0.594521 | 6.3:-66242346 | MS.gene042841:CDS |
| CAAGGAATTATCTTGGCATG+TGG | 0.595504 | 6.3:+66240172 | None:intergenic |
| CCTCAAGTCATAACCTGCAA+AGG | 0.598569 | 6.3:-66244518 | MS.gene042841:intron |
| ACCTTAATCCTAATCTCCAA+TGG | 0.599263 | 6.3:+66244314 | None:intergenic |
| AATGTTGCCGATGTGACAAA+AGG | 0.599429 | 6.3:-66241869 | MS.gene042841:CDS |
| ATAGGTTCTTTGTACAAACT+CGG | 0.599694 | 6.3:+66241402 | None:intergenic |
| CTAATCTCCAATGGTTGAGG+AGG | 0.600166 | 6.3:+66244323 | None:intergenic |
| CTATTCAATAGGTTGCGCAA+GGG | 0.602243 | 6.3:-66241628 | MS.gene042841:intron |
| CAATAGGTCTAGGTGCAGCA+TGG | 0.604039 | 6.3:-66241892 | MS.gene042841:intron |
| CTATGAAAACTGTTAACACA+TGG | 0.605315 | 6.3:+66242488 | None:intergenic |
| TATTTGGCCACGAAGCATCT+GGG | 0.608176 | 6.3:-66243217 | MS.gene042841:intron |
| TATTCAATAGGTTGCGCAAG+GGG | 0.610569 | 6.3:-66241627 | MS.gene042841:intron |
| TGGGGCTTGACTGTAACACT+TGG | 0.613463 | 6.3:-66241015 | MS.gene042841:CDS |
| TTTGCAGGTTATGACTTGAG+GGG | 0.620062 | 6.3:+66244520 | None:intergenic |
| GCGCAAGGGGCCAAACTAAG+GGG | 0.624386 | 6.3:-66241614 | MS.gene042841:CDS |
| ATCACTACGACAAAGAGAGG+TGG | 0.635585 | 6.3:+66244286 | None:intergenic |
| AAGATCACTACGACAAAGAG+AGG | 0.642771 | 6.3:+66244283 | None:intergenic |
| TGTAACACTTGGTGTGCCAA+AGG | 0.647519 | 6.3:-66241004 | MS.gene042841:CDS |
| ACAGCATGATTGCAATGCAG+TGG | 0.658129 | 6.3:+66241203 | None:intergenic |
| AGTAGAGAAGTATGTCAACA+AGG | 0.658436 | 6.3:-66240878 | MS.gene042841:intron |
| AGTGACTGAATTCAAAGAAG+GGG | 0.664041 | 6.3:-66242512 | MS.gene042841:CDS |
| AATATGCATTCTTAGCTGTG+GGG | 0.673736 | 6.3:-66242245 | MS.gene042841:CDS |
| CAAACAGCTGCAGTAGCATG+GGG | 0.680428 | 6.3:-66244386 | MS.gene042841:intron |
| GCTTCGTGGCCAAATATGCG+AGG | 0.691472 | 6.3:+66243224 | None:intergenic |
| AAGACCAAATATAACCACTG+TGG | 0.739475 | 6.3:+66241844 | None:intergenic |
| TGTGACAAAAGGATCCACAG+TGG | 0.822984 | 6.3:-66241858 | MS.gene042841:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATATTGAAAATAATAAAAT+TGG | + | chr6.3:66240749-66240768 | None:intergenic | 10.0% |
| !! | AAAAAATACTAAAAAGGAAA+TGG | + | chr6.3:66240238-66240257 | None:intergenic | 15.0% |
| !! | AAAAATACTAAAAAGGAAAT+GGG | + | chr6.3:66240237-66240256 | None:intergenic | 15.0% |
| !! | AAAAATATTTACATTGAACA+TGG | + | chr6.3:66240567-66240586 | None:intergenic | 15.0% |
| !! | AAAATAAATTCAGAGTAATT+TGG | + | chr6.3:66243197-66243216 | None:intergenic | 15.0% |
| !! | AGAATATAAGATAGATATAA+TGG | + | chr6.3:66242936-66242955 | None:intergenic | 15.0% |
| !! | ATACTGAATATAAAACTAAA+TGG | - | chr6.3:66241428-66241447 | MS.gene042841:CDS | 15.0% |
| !! | ATATCTATAGAAAACAAAAA+AGG | + | chr6.3:66240979-66240998 | None:intergenic | 15.0% |
| !! | TATAGTTAATAATAAACACT+TGG | + | chr6.3:66242518-66242537 | None:intergenic | 15.0% |
| !! | TATATTAAAAAATTAAGGGT+AGG | + | chr6.3:66244274-66244293 | None:intergenic | 15.0% |
| !! | TATCTATAGAAAACAAAAAA+GGG | + | chr6.3:66240978-66240997 | None:intergenic | 15.0% |
| !!! | GTTTAATTTTGATACATTAT+CGG | + | chr6.3:66240690-66240709 | None:intergenic | 15.0% |
| !!! | TATGAAAGAGATTTTATTTT+TGG | - | chr6.3:66244298-66244317 | MS.gene042841:CDS | 15.0% |
| !!! | TGATTTTCTAATATATATCA+AGG | + | chr6.3:66240540-66240559 | None:intergenic | 15.0% |
| !!! | TTTATTTTTAAACCTTAGAA+CGG | - | chr6.3:66243209-66243228 | MS.gene042841:intron | 15.0% |
| !! | AAATTGAAACATAAGGTTTA+AGG | - | chr6.3:66242540-66242559 | MS.gene042841:intron | 20.0% |
| !! | AAGAATAAATATTCATTAGC+AGG | + | chr6.3:66241382-66241401 | None:intergenic | 20.0% |
| !! | ATAAAATCATGCTTAGATAA+AGG | + | chr6.3:66243891-66243910 | None:intergenic | 20.0% |
| !! | ATCTATAGAAAACAACTAAT+TGG | + | chr6.3:66240780-66240799 | None:intergenic | 20.0% |
| !! | CATACATATCAAAACTAATA+TGG | + | chr6.3:66240272-66240291 | None:intergenic | 20.0% |
| !! | CTATAAGAAATTGAAACATA+AGG | - | chr6.3:66242533-66242552 | MS.gene042841:CDS | 20.0% |
| !! | GATATGATAAATAAATATGC+AGG | - | chr6.3:66244423-66244442 | MS.gene042841:intron | 20.0% |
| !! | TCGATAATAATTTGAGAAAA+TGG | + | chr6.3:66241207-66241226 | None:intergenic | 20.0% |
| !! | TCTTCAAATAAAACAACTAA+AGG | + | chr6.3:66241575-66241594 | None:intergenic | 20.0% |
| !! | TTTAACCAAATTATTGCAAA+AGG | - | chr6.3:66242112-66242131 | MS.gene042841:intron | 20.0% |
| !!! | AACTAATATTTGTCAAGTTT+TGG | - | chr6.3:66242290-66242309 | MS.gene042841:CDS | 20.0% |
| !!! | ACTAATATTTGTCAAGTTTT+GGG | - | chr6.3:66242291-66242310 | MS.gene042841:CDS | 20.0% |
| !!! | ACTTTAAAAGGATCTTTATT+CGG | - | chr6.3:66243784-66243803 | MS.gene042841:intron | 20.0% |
| !!! | AGAGATTTTATTTTTGGATA+AGG | - | chr6.3:66244304-66244323 | MS.gene042841:CDS | 20.0% |
| !!! | ATTTTGTTTGACATGATTAA+TGG | - | chr6.3:66241093-66241112 | MS.gene042841:intron | 20.0% |
| !!! | TACTAGTTAGTTATTTTCAA+GGG | - | chr6.3:66242702-66242721 | MS.gene042841:intron | 20.0% |
| !!! | TTGTTTTCTATAGATATTGT+CGG | - | chr6.3:66240982-66241001 | MS.gene042841:CDS | 20.0% |
| !!! | TTTCTAAAGTCAAACATTAA+TGG | - | chr6.3:66240648-66240667 | MS.gene042841:intron | 20.0% |
| ! | AAGACAAGATTTACAGTAAA+AGG | - | chr6.3:66242348-66242367 | MS.gene042841:CDS | 25.0% |
| ! | AAGTATGTTACAACAAGAAA+AGG | + | chr6.3:66243970-66243989 | None:intergenic | 25.0% |
| ! | AATAAAAGCTAATGAAAGCT+TGG | - | chr6.3:66241348-66241367 | MS.gene042841:intron | 25.0% |
| ! | AATAACTAACTAGTACTAGA+AGG | + | chr6.3:66242697-66242716 | None:intergenic | 25.0% |
| ! | AATTATATTGTGAACCTTGA+TGG | + | chr6.3:66242066-66242085 | None:intergenic | 25.0% |
| ! | ACGATAAGACAATATCAATA+GGG | - | chr6.3:66244102-66244121 | MS.gene042841:intron | 25.0% |
| ! | ACTATATTCAACATCTACTA+TGG | + | chr6.3:66242147-66242166 | None:intergenic | 25.0% |
| ! | AGACAAGATTTACAGTAAAA+GGG | - | chr6.3:66242349-66242368 | MS.gene042841:CDS | 25.0% |
| ! | AGATGTTGAATATAGTGTAA+TGG | - | chr6.3:66242151-66242170 | MS.gene042841:intron | 25.0% |
| ! | AGTATGTTACAACAAGAAAA+GGG | + | chr6.3:66243969-66243988 | None:intergenic | 25.0% |
| ! | ATGGAATTACATCTAACATA+AGG | - | chr6.3:66241447-66241466 | MS.gene042841:intron | 25.0% |
| ! | ATGTCAAACAAAATGTTGAT+TGG | + | chr6.3:66241087-66241106 | None:intergenic | 25.0% |
| ! | ATTCATCTATTAAGATCATG+AGG | + | chr6.3:66243041-66243060 | None:intergenic | 25.0% |
| ! | ATTTGTGTGTTGAAAATTTC+AGG | - | chr6.3:66243423-66243442 | MS.gene042841:intron | 25.0% |
| ! | CAACTTTGCATTATAACAAT+AGG | - | chr6.3:66242810-66242829 | MS.gene042841:intron | 25.0% |
| ! | TATAACAAAACATGACTTGA+GGG | + | chr6.3:66243558-66243577 | None:intergenic | 25.0% |
| ! | TATTGATATTGTCTTATCGT+CGG | + | chr6.3:66244102-66244121 | None:intergenic | 25.0% |
| ! | TCTTAAGAACTGTAATATGT+AGG | + | chr6.3:66241304-66241323 | None:intergenic | 25.0% |
| ! | TTATGTATATGCATGAGAAT+GGG | - | chr6.3:66241951-66241970 | MS.gene042841:intron | 25.0% |
| ! | TTTGTTTGTTCCATAAACAA+TGG | + | chr6.3:66240316-66240335 | None:intergenic | 25.0% |
| !! | ACTTTTAAGCAAGACATTTT+AGG | - | chr6.3:66244002-66244021 | MS.gene042841:intron | 25.0% |
| !! | ATGTCTTGCTTAAAAGTTTT+TGG | + | chr6.3:66243999-66244018 | None:intergenic | 25.0% |
| !! | ATTAAGTTGTTTATCCAAAC+AGG | - | chr6.3:66243635-66243654 | MS.gene042841:intron | 25.0% |
| !! | GATGATTCTCATTTTAAACT+CGG | + | chr6.3:66241801-66241820 | None:intergenic | 25.0% |
| !! | TAATTTTCTTTTTGCTCTTG+AGG | - | chr6.3:66243014-66243033 | MS.gene042841:intron | 25.0% |
| !! | TCATTTTAAACTCGGTAAAT+CGG | + | chr6.3:66241793-66241812 | None:intergenic | 25.0% |
| !! | TGAAATTTTCAACACACAAA+TGG | + | chr6.3:66243424-66243443 | None:intergenic | 25.0% |
| !! | TGTTTTCTATAGATATTGTC+GGG | - | chr6.3:66240983-66241002 | MS.gene042841:CDS | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+GGG | - | chr6.3:66243636-66243655 | MS.gene042841:intron | 25.0% |
| !! | TTACACCTTTTGCAATAATT+TGG | + | chr6.3:66242120-66242139 | None:intergenic | 25.0% |
| !!! | CTCAAAGTTTTGTTTCTAAA+TGG | - | chr6.3:66242732-66242751 | MS.gene042841:intron | 25.0% |
| !!! | GTACTAGTTAGTTATTTTCA+AGG | - | chr6.3:66242701-66242720 | MS.gene042841:intron | 25.0% |
| !!! | TAGTTGTTTTCTATAGATGA+GGG | - | chr6.3:66240782-66240801 | MS.gene042841:intron | 25.0% |
| !!! | TTAGTTGTTTTCTATAGATG+AGG | - | chr6.3:66240781-66240800 | MS.gene042841:intron | 25.0% |
| !!! | TTTTGTTGTCTAAGTTATCA+TGG | - | chr6.3:66244069-66244088 | MS.gene042841:intron | 25.0% |
| AAAATATGCATTCTTAGCTG+TGG | - | chr6.3:66242471-66242490 | MS.gene042841:CDS | 30.0% | |
| AAATATGCATTCTTAGCTGT+GGG | - | chr6.3:66242472-66242491 | MS.gene042841:CDS | 30.0% | |
| AAGCCTGTTTATCATTATTG+CGG | - | chr6.3:66242372-66242391 | MS.gene042841:CDS | 30.0% | |
| ACATACTTCTCTACTAATGA+AGG | + | chr6.3:66243835-66243854 | None:intergenic | 30.0% | |
| ATAGGTTCTTTGTACAAACT+CGG | + | chr6.3:66243319-66243338 | None:intergenic | 30.0% | |
| ATGACTATGTCCATTGTTTA+TGG | - | chr6.3:66240303-66240322 | MS.gene042841:intron | 30.0% | |
| ATTGGAGACAAGAAGTAAAA+AGG | + | chr6.3:66240731-66240750 | None:intergenic | 30.0% | |
| CACTACAATAGATGAATCAT+TGG | - | chr6.3:66241738-66241757 | MS.gene042841:intron | 30.0% | |
| CGATAAGACAATATCAATAG+GGG | - | chr6.3:66244103-66244122 | MS.gene042841:intron | 30.0% | |
| CTAAGGAATAAAAATCCACA+AGG | + | chr6.3:66244367-66244386 | None:intergenic | 30.0% | |
| CTATAACAAAACATGACTTG+AGG | + | chr6.3:66243559-66243578 | None:intergenic | 30.0% | |
| CTATGAAAACTGTTAACACA+TGG | + | chr6.3:66242233-66242252 | None:intergenic | 30.0% | |
| GACGATAAGACAATATCAAT+AGG | - | chr6.3:66244101-66244120 | MS.gene042841:intron | 30.0% | |
| GTTATGTATATGCATGAGAA+TGG | - | chr6.3:66241950-66241969 | MS.gene042841:intron | 30.0% | |
| GTTATTAAGTGCATTACTGA+TGG | - | chr6.3:66243445-66243464 | MS.gene042841:intron | 30.0% | |
| TACACTTAATGTTCTACTGT+TGG | - | chr6.3:66241529-66241548 | MS.gene042841:intron | 30.0% | |
| TATCCAATTACATCTCACAA+AGG | + | chr6.3:66241028-66241047 | None:intergenic | 30.0% | |
| TGCATTATAACAATAGGTCT+AGG | - | chr6.3:66242816-66242835 | MS.gene042841:intron | 30.0% | |
| TGCTTAATAAATACTGCCTA+AGG | + | chr6.3:66244384-66244403 | None:intergenic | 30.0% | |
| TTAAAAGGATCTTTATTCGG+AGG | - | chr6.3:66243787-66243806 | MS.gene042841:intron | 30.0% | |
| TTGGAGACAAGAAGTAAAAA+GGG | + | chr6.3:66240730-66240749 | None:intergenic | 30.0% | |
| ! | AATGAAGGAAGATCAGTTTT+AGG | + | chr6.3:66243820-66243839 | None:intergenic | 30.0% |
| ! | AGAATGCATATTTTCTCAAG+AGG | + | chr6.3:66242465-66242484 | None:intergenic | 30.0% |
| ! | ATCTTTCCTTGTTTACAACA+GGG | - | chr6.3:66243679-66243698 | MS.gene042841:intron | 30.0% |
| ! | CAGTTTAAATCTGGAAGTAT+TGG | + | chr6.3:66241133-66241152 | None:intergenic | 30.0% |
| ! | CATGTGTTAACAGTTTTCAT+AGG | - | chr6.3:66242231-66242250 | MS.gene042841:intron | 30.0% |
| ! | CTTGTGGATTTTTATTCCTT+AGG | - | chr6.3:66244365-66244384 | MS.gene042841:CDS | 30.0% |
| ! | TATCTTTCCTTGTTTACAAC+AGG | - | chr6.3:66243678-66243697 | MS.gene042841:intron | 30.0% |
| !! | AGTTGTTTTCTATAGATGAG+GGG | - | chr6.3:66240783-66240802 | MS.gene042841:intron | 30.0% |
| !! | ATATAGTGTAATGGTTTTGC+AGG | - | chr6.3:66242160-66242179 | MS.gene042841:intron | 30.0% |
| !! | CATAAGGTGTTTTTATATGC+AGG | - | chr6.3:66241463-66241482 | MS.gene042841:intron | 30.0% |
| !!! | AGTTTTGTTTCTAAATGGAC+AGG | - | chr6.3:66242737-66242756 | MS.gene042841:intron | 30.0% |
| !!! | TATTTGTCAAGTTTTGGGAT+TGG | - | chr6.3:66242296-66242315 | MS.gene042841:CDS | 30.0% |
| AACTAACTAGTACTAGAAGG+TGG | + | chr6.3:66242694-66242713 | None:intergenic | 35.0% | |
| AAGACCAAATATAACCACTG+TGG | + | chr6.3:66242877-66242896 | None:intergenic | 35.0% | |
| AATATGCATTCTTAGCTGTG+GGG | - | chr6.3:66242473-66242492 | MS.gene042841:CDS | 35.0% | |
| AATTTACAGCTATGGCTAGT+TGG | + | chr6.3:66241987-66242006 | None:intergenic | 35.0% | |
| ACACCGCAATAATGATAAAC+AGG | + | chr6.3:66242378-66242397 | None:intergenic | 35.0% | |
| ACAGTGGTTATATTTGGTCT+TGG | - | chr6.3:66242876-66242895 | MS.gene042841:intron | 35.0% | |
| ACATAAAGTGACACTCAGTA+TGG | + | chr6.3:66242587-66242606 | None:intergenic | 35.0% | |
| ACATTGATCAACTATGGGAA+TGG | - | chr6.3:66241691-66241710 | MS.gene042841:intron | 35.0% | |
| ACCATTGGAGATTAGGATTA+AGG | - | chr6.3:66240403-66240422 | MS.gene042841:intron | 35.0% | |
| ACCTTAATCCTAATCTCCAA+TGG | + | chr6.3:66240407-66240426 | None:intergenic | 35.0% | |
| ACTGAAGTAACAACATGTGT+CGG | + | chr6.3:66241180-66241199 | None:intergenic | 35.0% | |
| AGAGTGACATTGATCAACTA+TGG | - | chr6.3:66241685-66241704 | MS.gene042841:intron | 35.0% | |
| AGTCATGTCTATGTGAATTG+CGG | + | chr6.3:66242093-66242112 | None:intergenic | 35.0% | |
| AGTGACTGAATTCAAAGAAG+GGG | - | chr6.3:66242206-66242225 | MS.gene042841:intron | 35.0% | |
| ATTAAGTGCATTACTGATGG+TGG | - | chr6.3:66243448-66243467 | MS.gene042841:intron | 35.0% | |
| ATTACTCAGAAGTAGTCCTA+CGG | + | chr6.3:66242628-66242647 | None:intergenic | 35.0% | |
| CAATCCAGGTCCATAAAAAA+TGG | - | chr6.3:66241883-66241902 | MS.gene042841:CDS | 35.0% | |
| CAGGTCCATAAAAAATGGTA+GGG | - | chr6.3:66241888-66241907 | MS.gene042841:CDS | 35.0% | |
| CATCAGACACAGTTTAAATC+TGG | + | chr6.3:66241142-66241161 | None:intergenic | 35.0% | |
| CTGACAGGAAGAACTTTAAA+AGG | - | chr6.3:66243772-66243791 | MS.gene042841:intron | 35.0% | |
| GAATACACAGTTGTTCATTC+TGG | - | chr6.3:66242411-66242430 | MS.gene042841:CDS | 35.0% | |
| GAGTGACATTGATCAACTAT+GGG | - | chr6.3:66241686-66241705 | MS.gene042841:intron | 35.0% | |
| GAGTGACTGAATTCAAAGAA+GGG | - | chr6.3:66242205-66242224 | MS.gene042841:intron | 35.0% | |
| GCTTTCAATCTCATGAAAGA+AGG | - | chr6.3:66244502-66244521 | MS.gene042841:intron | 35.0% | |
| GTCTAAGTTATCATGGTCAT+TGG | - | chr6.3:66244076-66244095 | MS.gene042841:intron | 35.0% | |
| GTGTTATGTAGTCATCAATC+TGG | + | chr6.3:66244453-66244472 | None:intergenic | 35.0% | |
| TCATGACTCTCCTATTCAAT+AGG | - | chr6.3:66243079-66243098 | MS.gene042841:intron | 35.0% | |
| TCTTGTGTAAAAACAGGGTA+AGG | - | chr6.3:66240878-66240897 | MS.gene042841:intron | 35.0% | |
| TGAATAGGAGAGTCATGATT+TGG | + | chr6.3:66243077-66243096 | None:intergenic | 35.0% | |
| TGCAATTGTGCATGTGAAAT+TGG | + | chr6.3:66243377-66243396 | None:intergenic | 35.0% | |
| TTAAGTGCATTACTGATGGT+GGG | - | chr6.3:66243449-66243468 | MS.gene042841:intron | 35.0% | |
| TTTCTGTAAGTCCAAGTACT+CGG | - | chr6.3:66242910-66242929 | MS.gene042841:intron | 35.0% | |
| ! | AATCCACAGAAGTGTGAAAA+TGG | - | chr6.3:66243155-66243174 | MS.gene042841:intron | 35.0% |
| ! | ACCACACAGCTAAATCTTTT+GGG | - | chr6.3:66243275-66243294 | MS.gene042841:intron | 35.0% |
| ! | AGTAGAGAAGTATGTCAACA+AGG | - | chr6.3:66243840-66243859 | MS.gene042841:intron | 35.0% |
| ! | GAATTCTCTTTGTGCTTTTG+CGG | + | chr6.3:66242967-66242986 | None:intergenic | 35.0% |
| ! | TACCACACAGCTAAATCTTT+TGG | - | chr6.3:66243274-66243293 | MS.gene042841:intron | 35.0% |
| ! | TCTTTCCTTGTTTACAACAG+GGG | - | chr6.3:66243680-66243699 | MS.gene042841:intron | 35.0% |
| ! | TTACCATTTTCACACTTCTG+TGG | + | chr6.3:66243161-66243180 | None:intergenic | 35.0% |
| ! | TTGATGGTACAGCAAAATAC+AGG | + | chr6.3:66242050-66242069 | None:intergenic | 35.0% |
| !! | ATATTTGGTCTTGGAACTGT+TGG | - | chr6.3:66242885-66242904 | MS.gene042841:intron | 35.0% |
| !! | ATTTTCTCAAGAGGTACATG+AGG | + | chr6.3:66242456-66242475 | None:intergenic | 35.0% |
| !! | GATTTCTGTTTTGAATGTGC+AGG | - | chr6.3:66243475-66243494 | MS.gene042841:intron | 35.0% |
| !! | TCGGTAAATCGGTTTTCAAA+CGG | + | chr6.3:66241782-66241801 | None:intergenic | 35.0% |
| !! | TGTATTTTGCTGTACCATCA+AGG | - | chr6.3:66242049-66242068 | MS.gene042841:intron | 35.0% |
| !!! | AGTTTTGGGATTGGAAAGAA+AGG | - | chr6.3:66242305-66242324 | MS.gene042841:CDS | 35.0% |
| !!! | CTTTTAAAGTTCTTCCTGTC+AGG | + | chr6.3:66243774-66243793 | None:intergenic | 35.0% |
| !!! | GTTTTGGGATTGGAAAGAAA+GGG | - | chr6.3:66242306-66242325 | MS.gene042841:CDS | 35.0% |
| !!! | TGTGTGATATTTTGACCGTA+AGG | + | chr6.3:66241720-66241739 | None:intergenic | 35.0% |
| !!! | TTACCCTGTTTTTACACAAG+AGG | + | chr6.3:66240879-66240898 | None:intergenic | 35.0% |
| AAGATCACTACGACAAAGAG+AGG | + | chr6.3:66240438-66240457 | None:intergenic | 40.0% | |
| AAGGATCTTTATTCGGAGGA+TGG | - | chr6.3:66243791-66243810 | MS.gene042841:intron | 40.0% | |
| AATGTTGCCGATGTGACAAA+AGG | - | chr6.3:66242849-66242868 | MS.gene042841:intron | 40.0% | |
| AATTCAAGTCAGACCCTGTT+TGG | + | chr6.3:66243652-66243671 | None:intergenic | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | - | chr6.3:66240872-66240891 | MS.gene042841:intron | 40.0% | |
| ACATCTATGTGAGACATCGT+CGG | + | chr6.3:66244224-66244243 | None:intergenic | 40.0% | |
| ACGCATTTACTGCAGATAGT+AGG | + | chr6.3:66241846-66241865 | None:intergenic | 40.0% | |
| AGACAAGAAGTAAAAAGGGC+AGG | + | chr6.3:66240726-66240745 | None:intergenic | 40.0% | |
| AGAGATTATGAGCCGTTCTA+AGG | + | chr6.3:66243224-66243243 | None:intergenic | 40.0% | |
| AGATATAATGGCCGAGTACT+TGG | + | chr6.3:66242924-66242943 | None:intergenic | 40.0% | |
| ATCCTAATCTCCAATGGTTG+AGG | + | chr6.3:66240401-66240420 | None:intergenic | 40.0% | |
| ATGCGTGATACTATGACTGA+AGG | - | chr6.3:66241860-66241879 | MS.gene042841:CDS | 40.0% | |
| ATTTACTGCAGATAGTAGGC+TGG | + | chr6.3:66241842-66241861 | None:intergenic | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | - | chr6.3:66240873-66240892 | MS.gene042841:intron | 40.0% | |
| CCAGGTCCATAAAAAATGGT+AGG | - | chr6.3:66241887-66241906 | MS.gene042841:CDS | 40.0% | |
| CGTACAATACACCAAATGGT+CGG | - | chr6.3:66240904-66240923 | MS.gene042841:CDS | 40.0% | |
| CTAGCCATAGCTGTAAATTG+CGG | - | chr6.3:66241988-66242007 | MS.gene042841:intron | 40.0% | |
| CTATTCAATAGGTTGCGCAA+GGG | - | chr6.3:66243090-66243109 | MS.gene042841:intron | 40.0% | |
| CTGAAGTAACAACATGTGTC+GGG | + | chr6.3:66241179-66241198 | None:intergenic | 40.0% | |
| CTTTGCAGGTTATGACTTGA+GGG | + | chr6.3:66240202-66240221 | None:intergenic | 40.0% | |
| GAAAACAAAAAAGGGCAACC+CGG | + | chr6.3:66240970-66240989 | None:intergenic | 40.0% | |
| GACAATATCAATAGGGGTTG+AGG | - | chr6.3:66244109-66244128 | MS.gene042841:intron | 40.0% | |
| GAGTACTTGGACTTACAGAA+AGG | + | chr6.3:66242911-66242930 | None:intergenic | 40.0% | |
| GCCAAATATGCGAGGAAATA+TGG | + | chr6.3:66241489-66241508 | None:intergenic | 40.0% | |
| GCCATATTTCCTCGCATATT+TGG | - | chr6.3:66241485-66241504 | MS.gene042841:intron | 40.0% | |
| GGAGTGACTGAATTCAAAGA+AGG | - | chr6.3:66242204-66242223 | MS.gene042841:intron | 40.0% | |
| GGATCCACAGTGGTTATATT+TGG | - | chr6.3:66242870-66242889 | MS.gene042841:intron | 40.0% | |
| GGTCCTTTGTGAGATGTAAT+TGG | - | chr6.3:66241022-66241041 | MS.gene042841:intron | 40.0% | |
| GTTGTTGTCATGTGACTGTA+AGG | - | chr6.3:66240828-66240847 | MS.gene042841:intron | 40.0% | |
| TAACTAGTACTAGAAGGTGG+TGG | + | chr6.3:66242691-66242710 | None:intergenic | 40.0% | |
| TATTCAATAGGTTGCGCAAG+GGG | - | chr6.3:66243091-66243110 | MS.gene042841:intron | 40.0% | |
| TCCCAAAAGATTTAGCTGTG+TGG | + | chr6.3:66243279-66243298 | None:intergenic | 40.0% | |
| TCGGGTCATCATACAAGAAT+TGG | - | chr6.3:66241001-66241020 | MS.gene042841:CDS | 40.0% | |
| TCGTAGTGATCTTTCTGCTT+GGG | - | chr6.3:66240445-66240464 | MS.gene042841:intron | 40.0% | |
| TGAAGTAACAACATGTGTCG+GGG | + | chr6.3:66241178-66241197 | None:intergenic | 40.0% | |
| TTACTCAGAAGTAGTCCTAC+GGG | + | chr6.3:66242627-66242646 | None:intergenic | 40.0% | |
| TTTGCAGGTTATGACTTGAG+GGG | + | chr6.3:66240201-66240220 | None:intergenic | 40.0% | |
| ! | AGGGGTGCATCTAGAATAAT+TGG | - | chr6.3:66243122-66243141 | MS.gene042841:intron | 40.0% |
| ! | CATTATGGACTATTCCTGAC+AGG | - | chr6.3:66243757-66243776 | MS.gene042841:intron | 40.0% |
| ! | CTATGGGAATGGATTCCTTA+CGG | - | chr6.3:66241702-66241721 | MS.gene042841:intron | 40.0% |
| ! | TAAGTGCATTACTGATGGTG+GGG | - | chr6.3:66243450-66243469 | MS.gene042841:intron | 40.0% |
| ! | TGTGGATCCTTTTGTCACAT+CGG | + | chr6.3:66242859-66242878 | None:intergenic | 40.0% |
| ! | TTCATGTGCTTTTCTCCTTG+TGG | - | chr6.3:66244349-66244368 | MS.gene042841:CDS | 40.0% |
| !! | CGGTAAATCGGTTTTCAAAC+GGG | + | chr6.3:66241781-66241800 | None:intergenic | 40.0% |
| !!! | CCTACCATTTTTTATGGACC+TGG | + | chr6.3:66241890-66241909 | None:intergenic | 40.0% |
| !!! | CTGCACCCTACCATTTTTTA+TGG | + | chr6.3:66241896-66241915 | None:intergenic | 40.0% |
| AACAAACAGCTGCAGTAGCA+TGG | - | chr6.3:66240330-66240349 | MS.gene042841:intron | 45.0% | |
| ACAAACAGCTGCAGTAGCAT+GGG | - | chr6.3:66240331-66240350 | MS.gene042841:intron | 45.0% | |
| ACAGCATGATTGCAATGCAG+TGG | + | chr6.3:66243518-66243537 | None:intergenic | 45.0% | |
| ACATCGTCGGACATTCAATG+TGG | + | chr6.3:66244211-66244230 | None:intergenic | 45.0% | |
| ACTATGACTGAAGGCAATCC+AGG | - | chr6.3:66241869-66241888 | MS.gene042841:CDS | 45.0% | |
| AGATAGTAGGCTGGAATCGT+TGG | + | chr6.3:66241833-66241852 | None:intergenic | 45.0% | |
| AGGACTAATCTCCCACAATG+TGG | - | chr6.3:66244141-66244160 | MS.gene042841:intron | 45.0% | |
| ATCACTACGACAAAGAGAGG+TGG | + | chr6.3:66240435-66240454 | None:intergenic | 45.0% | |
| ATGTCACTCTAACTGAGCGT+TGG | + | chr6.3:66241675-66241694 | None:intergenic | 45.0% | |
| CAAATGCAATTGCGGCACAT+TGG | - | chr6.3:66242015-66242034 | MS.gene042841:intron | 45.0% | |
| CAACTTTACCAGTTGTGCCA+AGG | + | chr6.3:66240812-66240831 | None:intergenic | 45.0% | |
| CAGACCGCAATTTACAGCTA+TGG | + | chr6.3:66241995-66242014 | None:intergenic | 45.0% | |
| CCATAATGAGCTGACATCTC+AGG | + | chr6.3:66243745-66243764 | None:intergenic | 45.0% | |
| CCTATTCAATAGGTTGCGCA+AGG | - | chr6.3:66243089-66243108 | MS.gene042841:intron | 45.0% | |
| CCTCAAGTCATAACCTGCAA+AGG | - | chr6.3:66240200-66240219 | MS.gene042841:CDS | 45.0% | |
| CCTGAGATGTCAGCTCATTA+TGG | - | chr6.3:66243742-66243761 | MS.gene042841:intron | 45.0% | |
| CCTTGCGCAACCTATTGAAT+AGG | + | chr6.3:66243092-66243111 | None:intergenic | 45.0% | |
| CCTTTGCAGGTTATGACTTG+AGG | + | chr6.3:66240203-66240222 | None:intergenic | 45.0% | |
| CTAATCTCCAATGGTTGAGG+AGG | + | chr6.3:66240398-66240417 | None:intergenic | 45.0% | |
| CTATAGATGAGGGGTAACCT+TGG | - | chr6.3:66240792-66240811 | MS.gene042841:intron | 45.0% | |
| CTCCTCAACCATTGGAGATT+AGG | - | chr6.3:66240396-66240415 | MS.gene042841:intron | 45.0% | |
| GAATAATCGACCTGCACGAT+AGG | + | chr6.3:66243337-66243356 | None:intergenic | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | - | chr6.3:66240900-66240919 | MS.gene042841:CDS | 45.0% | |
| GTACAAAGAACCTATCGTGC+AGG | - | chr6.3:66243324-66243343 | MS.gene042841:intron | 45.0% | |
| GTCATGTGACTGTAAGGTCA+CGG | - | chr6.3:66240834-66240853 | MS.gene042841:intron | 45.0% | |
| GTCGTAGTGATCTTTCTGCT+TGG | - | chr6.3:66240444-66240463 | MS.gene042841:intron | 45.0% | |
| TAGATTACCCAGATGCTTCG+TGG | + | chr6.3:66241511-66241530 | None:intergenic | 45.0% | |
| TAGGAGAATGCATGTCATGC+AGG | - | chr6.3:66242250-66242269 | MS.gene042841:CDS | 45.0% | |
| TCATGTGACTGTAAGGTCAC+GGG | - | chr6.3:66240835-66240854 | MS.gene042841:intron | 45.0% | |
| TCTAGATGCACCCCTTAGTT+TGG | + | chr6.3:66243117-66243136 | None:intergenic | 45.0% | |
| TGTGACAAAAGGATCCACAG+TGG | - | chr6.3:66242860-66242879 | MS.gene042841:intron | 45.0% | |
| ! | AGTCCTACGGGTTACACAAT+GGG | + | chr6.3:66242615-66242634 | None:intergenic | 45.0% |
| ! | ATATTTGGCCACGAAGCATC+TGG | - | chr6.3:66241500-66241519 | MS.gene042841:intron | 45.0% |
| ! | ATTGGTGGTTTGCCACATTG+TGG | + | chr6.3:66244156-66244175 | None:intergenic | 45.0% |
| ! | TAGTCCTACGGGTTACACAA+TGG | + | chr6.3:66242616-66242635 | None:intergenic | 45.0% |
| ! | TATTTGGCCACGAAGCATCT+GGG | - | chr6.3:66241501-66241520 | MS.gene042841:intron | 45.0% |
| ! | TCCTTGTTTACAACAGGGGT+GGG | - | chr6.3:66243684-66243703 | MS.gene042841:intron | 45.0% |
| ! | TTACACAAGAGGCTGTTTCC+AGG | + | chr6.3:66240868-66240887 | None:intergenic | 45.0% |
| ! | TTCCTTGTTTACAACAGGGG+TGG | - | chr6.3:66243683-66243702 | MS.gene042841:intron | 45.0% |
| ! | TTGGTGGTTTGCCACATTGT+GGG | + | chr6.3:66244155-66244174 | None:intergenic | 45.0% |
| !! | AAGGTGGTGGAAATTCGCTA+TGG | + | chr6.3:66242678-66242697 | None:intergenic | 45.0% |
| !! | TGTAACACTTGGTGTGCCAA+AGG | - | chr6.3:66243714-66243733 | MS.gene042841:intron | 45.0% |
| !! | ATGTTTATATTAAAAAATTA+AGG | + | chr6.3:66244279-66244298 | None:intergenic | 5.0% |
| !! | TAAAAAAAAAAATACTAAAA+AGG | + | chr6.3:66240244-66240263 | None:intergenic | 5.0% |
| !! | TGTTTATATTAAAAAATTAA+GGG | + | chr6.3:66244278-66244297 | None:intergenic | 5.0% |
| !!! | TTTTATATATTTTTACTTTA+TGG | - | chr6.3:66243905-66243924 | MS.gene042841:intron | 5.0% |
| ACTAAAGCTCCCGCATACAC+AGG | + | chr6.3:66240944-66240963 | None:intergenic | 50.0% | |
| AGGGGTTGAGGCTAGAAGAA+AGG | - | chr6.3:66244121-66244140 | MS.gene042841:intron | 50.0% | |
| AGTAGGCTGGAATCGTTGGA+CGG | + | chr6.3:66241829-66241848 | None:intergenic | 50.0% | |
| AGTCAGTCCTCCTCAACCAT+TGG | - | chr6.3:66240388-66240407 | MS.gene042841:intron | 50.0% | |
| CAAACAGCTGCAGTAGCATG+GGG | - | chr6.3:66240332-66240351 | MS.gene042841:intron | 50.0% | |
| CAATAGGTCTAGGTGCAGCA+TGG | - | chr6.3:66242826-66242845 | MS.gene042841:intron | 50.0% | |
| CTAAAGCTCCCGCATACACA+GGG | + | chr6.3:66240943-66240962 | None:intergenic | 50.0% | |
| GACATCTCAGGCTTCACCTT+TGG | + | chr6.3:66243733-66243752 | None:intergenic | 50.0% | |
| GCGGTCTGCAAATGCAATTG+CGG | - | chr6.3:66242007-66242026 | MS.gene042841:intron | 50.0% | |
| GTGTGTTCTGCAGGTTTCTG+AGG | + | chr6.3:66242656-66242675 | None:intergenic | 50.0% | |
| TCATGCAGGCTGTGCAAATC+AGG | - | chr6.3:66242264-66242283 | MS.gene042841:CDS | 50.0% | |
| TGGGGCTTGACTGTAACACT+TGG | - | chr6.3:66243703-66243722 | MS.gene042841:intron | 50.0% | |
| TGTCCCATTGTGTAACCCGT+AGG | - | chr6.3:66242609-66242628 | MS.gene042841:intron | 50.0% | |
| TTCGCTATGGTGTGTTCTGC+AGG | + | chr6.3:66242665-66242684 | None:intergenic | 50.0% | |
| ! | ATTGTTGAGAGCGTAGGGCT+AGG | - | chr6.3:66242183-66242202 | MS.gene042841:intron | 50.0% |
| ! | CCTTGTTTACAACAGGGGTG+GGG | - | chr6.3:66243685-66243704 | MS.gene042841:intron | 50.0% |
| ! | GCAGGATTGTTGAGAGCGTA+GGG | - | chr6.3:66242178-66242197 | MS.gene042841:intron | 50.0% |
| ! | TGCAGGATTGTTGAGAGCGT+AGG | - | chr6.3:66242177-66242196 | MS.gene042841:intron | 50.0% |
| AAGGTCACGGGTTCAAGTCC+TGG | - | chr6.3:66240847-66240866 | MS.gene042841:intron | 55.0% | |
| AGGGGTAACCTTGGCACAAC+TGG | - | chr6.3:66240801-66240820 | MS.gene042841:intron | 55.0% | |
| CCCCACCCCTGTTGTAAACA+AGG | + | chr6.3:66243688-66243707 | None:intergenic | 55.0% | |
| CTTAGCTGTGGGGTTTCTGC+AGG | - | chr6.3:66242483-66242502 | MS.gene042841:CDS | 55.0% | |
| GCTTCGTGGCCAAATATGCG+AGG | + | chr6.3:66241497-66241516 | None:intergenic | 55.0% | |
| GGAACTGCACTCACCTTTGC+AGG | + | chr6.3:66240216-66240235 | None:intergenic | 55.0% | |
| TGCGCAAGGGGCCAAACTAA+GGG | - | chr6.3:66243103-66243122 | MS.gene042841:intron | 55.0% | |
| TTGCGCAAGGGGCCAAACTA+AGG | - | chr6.3:66243102-66243121 | MS.gene042841:intron | 55.0% | |
| ! | ATGCGGGAGCTTTAGTGCAC+CGG | - | chr6.3:66240948-66240967 | MS.gene042841:CDS | 55.0% |
| !! | AGCTGGAGAGGCATTGGTGA+TGG | - | chr6.3:66240355-66240374 | MS.gene042841:intron | 55.0% |
| !! | GGCATTGGTGATGGAGGAAG+TGG | - | chr6.3:66240364-66240383 | MS.gene042841:intron | 55.0% |
| !! | TGGAGAGGCATTGGTGATGG+AGG | - | chr6.3:66240358-66240377 | MS.gene042841:intron | 55.0% |
| AGTAGCATGGGGAGCTGGAG+AGG | - | chr6.3:66240343-66240362 | MS.gene042841:intron | 60.0% | |
| CAAATGGTCGGACCCCTTCC+CGG | - | chr6.3:66240916-66240935 | MS.gene042841:CDS | 60.0% | |
| CATACACAGGGTCCGGGAAG+GGG | + | chr6.3:66240931-66240950 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGTGTATG+CGG | - | chr6.3:66240931-66240950 | MS.gene042841:CDS | 60.0% | |
| GCATACACAGGGTCCGGGAA+GGG | + | chr6.3:66240932-66240951 | None:intergenic | 60.0% | |
| GCGCAAGGGGCCAAACTAAG+GGG | - | chr6.3:66243104-66243123 | MS.gene042841:intron | 60.0% | |
| TGTGTCGGGGTCGTGAGTGT+TGG | + | chr6.3:66241165-66241184 | None:intergenic | 60.0% | |
| TTCCCGGACCCTGTGTATGC+GGG | - | chr6.3:66240932-66240951 | MS.gene042841:CDS | 60.0% | |
| ! | ATGGGGAGCTGGAGAGGCAT+TGG | - | chr6.3:66240349-66240368 | MS.gene042841:intron | 60.0% |
| ! | TGCGGGAGCTTTAGTGCACC+GGG | - | chr6.3:66240949-66240968 | MS.gene042841:CDS | 60.0% |
| CGCATACACAGGGTCCGGGA+AGG | + | chr6.3:66240933-66240952 | None:intergenic | 65.0% | |
| CGGGAAGGGGTCCGACCATT+TGG | + | chr6.3:66240918-66240937 | None:intergenic | 65.0% | |
| CTCCCGCATACACAGGGTCC+GGG | + | chr6.3:66240937-66240956 | None:intergenic | 65.0% | |
| GCTCCCGCATACACAGGGTC+CGG | + | chr6.3:66240938-66240957 | None:intergenic | 65.0% | |
| GCTGCAGTAGCATGGGGAGC+TGG | - | chr6.3:66240338-66240357 | MS.gene042841:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 66240179 | 66244561 | 66240179 | ID=MS.gene042841 |
| chr6.3 | mRNA | 66240179 | 66244561 | 66240179 | ID=MS.gene042841.t1;Parent=MS.gene042841 |
| chr6.3 | exon | 66244519 | 66244561 | 66244519 | ID=MS.gene042841.t1.exon1;Parent=MS.gene042841.t1 |
| chr6.3 | CDS | 66244519 | 66244561 | 66244519 | ID=cds.MS.gene042841.t1;Parent=MS.gene042841.t1 |
| chr6.3 | exon | 66244265 | 66244401 | 66244265 | ID=MS.gene042841.t1.exon2;Parent=MS.gene042841.t1 |
| chr6.3 | CDS | 66244265 | 66244401 | 66244265 | ID=cds.MS.gene042841.t1;Parent=MS.gene042841.t1 |
| chr6.3 | exon | 66243218 | 66243255 | 66243218 | ID=MS.gene042841.t1.exon3;Parent=MS.gene042841.t1 |
| chr6.3 | CDS | 66243218 | 66243255 | 66243218 | ID=cds.MS.gene042841.t1;Parent=MS.gene042841.t1 |
| chr6.3 | exon | 66242236 | 66242558 | 66242236 | ID=MS.gene042841.t1.exon4;Parent=MS.gene042841.t1 |
| chr6.3 | CDS | 66242236 | 66242558 | 66242236 | ID=cds.MS.gene042841.t1;Parent=MS.gene042841.t1 |
| chr6.3 | exon | 66241826 | 66241908 | 66241826 | ID=MS.gene042841.t1.exon5;Parent=MS.gene042841.t1 |
| chr6.3 | CDS | 66241826 | 66241908 | 66241826 | ID=cds.MS.gene042841.t1;Parent=MS.gene042841.t1 |
| chr6.3 | exon | 66241564 | 66241639 | 66241564 | ID=MS.gene042841.t1.exon6;Parent=MS.gene042841.t1 |
| chr6.3 | CDS | 66241564 | 66241639 | 66241564 | ID=cds.MS.gene042841.t1;Parent=MS.gene042841.t1 |
| chr6.3 | exon | 66241395 | 66241456 | 66241395 | ID=MS.gene042841.t1.exon7;Parent=MS.gene042841.t1 |
| chr6.3 | CDS | 66241395 | 66241456 | 66241395 | ID=cds.MS.gene042841.t1;Parent=MS.gene042841.t1 |
| chr6.3 | exon | 66241200 | 66241295 | 66241200 | ID=MS.gene042841.t1.exon8;Parent=MS.gene042841.t1 |
| chr6.3 | CDS | 66241200 | 66241295 | 66241200 | ID=cds.MS.gene042841.t1;Parent=MS.gene042841.t1 |
| chr6.3 | exon | 66240879 | 66241040 | 66240879 | ID=MS.gene042841.t1.exon9;Parent=MS.gene042841.t1 |
| chr6.3 | CDS | 66240879 | 66241040 | 66240879 | ID=cds.MS.gene042841.t1;Parent=MS.gene042841.t1 |
| chr6.3 | exon | 66240179 | 66240295 | 66240179 | ID=MS.gene042841.t1.exon10;Parent=MS.gene042841.t1 |
| chr6.3 | CDS | 66240179 | 66240295 | 66240179 | ID=cds.MS.gene042841.t1;Parent=MS.gene042841.t1 |
| Gene Sequence |
| Protein sequence |
