AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene069804

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene069804.t1 MTR_6g068930 97.606 376 9 0 3 378 2 377 0.0 752
MS.gene069804.t1 MTR_3g089940 52.255 377 176 2 4 376 2 378 2.56e-144 414
MS.gene069804.t1 MTR_1g069430 53.226 372 170 2 9 376 6 377 6.26e-144 413
MS.gene069804.t1 MTR_7g099040 52.632 380 175 3 1 376 1 379 2.73e-143 412
MS.gene069804.t1 MTR_3g089977 51.194 377 180 2 4 376 2 378 4.93e-143 411
MS.gene069804.t1 MTR_3g089940 51.459 377 179 2 4 376 2 378 6.48e-143 410
MS.gene069804.t1 MTR_3g089970 50.794 378 182 2 3 376 2 379 2.62e-141 407
MS.gene069804.t1 MTR_5g087710 50.131 383 185 4 2 378 9 391 1.65e-128 374
MS.gene069804.t1 MTR_3g089940 53.097 339 155 2 4 338 2 340 4.84e-128 372
MS.gene069804.t1 MTR_3g089940 52.212 339 158 2 4 338 2 340 1.59e-126 368
MS.gene069804.t1 MTR_7g068320 49.081 381 186 4 4 376 13 393 4.16e-125 366
MS.gene069804.t1 MTR_7g068330 48.691 382 189 3 2 376 4 385 4.17e-124 363
MS.gene069804.t1 MTR_3g079180 47.396 384 194 5 1 376 1 384 1.58e-120 354
MS.gene069804.t1 MTR_3g099460 51.070 374 175 3 11 376 16 389 4.57e-116 343
MS.gene069804.t1 MTR_3g099460 51.240 363 169 3 22 376 20 382 8.75e-113 334
MS.gene069804.t1 MTR_3g099460 51.724 319 151 2 61 376 8 326 9.17e-98 294
MS.gene069804.t1 MTR_5g045710 41.534 378 210 6 5 376 2 374 4.28e-97 294
MS.gene069804.t1 MTR_0001s0660 40.426 376 216 4 5 376 2 373 1.53e-95 293
MS.gene069804.t1 MTR_3g099460 53.381 281 123 3 11 283 16 296 1.39e-82 255
MS.gene069804.t1 MTR_3g099460 53.704 270 117 3 22 283 20 289 4.46e-79 246
MS.gene069804.t1 MTR_3g079170 45.126 277 128 5 96 367 24 281 6.91e-76 236
MS.gene069804.t1 MTR_5g045710 40.203 296 168 5 85 376 1 291 1.03e-67 216
MS.gene069804.t1 MTR_8g095220 28.800 375 250 11 14 376 55 424 7.01e-35 133
MS.gene069804.t1 MTR_8g095220 31.102 254 161 8 14 256 55 305 8.38e-26 106
MS.gene069804.t1 MTR_6g465010 27.467 375 206 14 18 367 3 336 3.71e-20 90.9
MS.gene069804.t1 MTR_6g466320 27.467 375 206 14 18 367 19 352 5.14e-20 90.9
MS.gene069804.t1 MTR_6g465010 27.467 375 206 14 18 367 19 352 5.14e-20 90.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene069804.t1 AT5G24760 77.953 381 81 1 1 378 1 381 0.0 627
MS.gene069804.t1 AT5G24760 78.693 352 75 0 27 378 1 352 0.0 593
MS.gene069804.t1 AT5G24760 78.693 352 75 0 27 378 1 352 0.0 593
MS.gene069804.t1 AT5G24760 78.277 267 58 0 112 378 1 267 3.46e-161 452
MS.gene069804.t1 AT1G77120 53.846 377 168 3 5 376 2 377 5.08e-148 424
MS.gene069804.t1 AT5G43940 53.476 374 170 2 9 378 6 379 1.73e-144 415
MS.gene069804.t1 AT5G43940 51.554 386 171 3 9 378 6 391 3.35e-140 404
MS.gene069804.t1 AT1G64710 50.133 375 180 3 9 376 6 380 1.28e-132 385
MS.gene069804.t1 AT5G42250 48.953 382 188 5 2 376 8 389 1.19e-125 367
MS.gene069804.t1 AT1G32780 44.271 384 200 3 9 378 7 390 1.57e-122 359
MS.gene069804.t1 AT1G64710 48.179 357 178 3 27 376 1 357 7.54e-121 354
MS.gene069804.t1 AT4G22110 50.529 378 174 4 11 378 15 389 4.76e-120 353
MS.gene069804.t1 AT4G22110 50.529 378 174 4 11 378 15 389 4.76e-120 353
MS.gene069804.t1 AT1G22430 49.096 387 180 5 4 378 7 388 8.57e-120 352
MS.gene069804.t1 AT1G22430 49.096 387 180 5 4 378 7 388 8.57e-120 352
MS.gene069804.t1 AT1G22440 49.735 378 177 4 11 378 12 386 2.90e-119 351
MS.gene069804.t1 AT1G64710 47.059 306 159 2 74 376 6 311 1.13e-97 293
MS.gene069804.t1 AT1G22430 47.284 313 141 6 4 304 7 307 1.48e-87 267
MS.gene069804.t1 AT1G22430 50.588 255 110 4 4 247 7 256 8.24e-79 244
MS.gene069804.t1 AT1G22430 50.588 255 110 4 4 247 7 256 8.24e-79 244
MS.gene069804.t1 AT4G22110 52.439 246 105 3 11 247 15 257 4.61e-78 242
MS.gene069804.t1 AT5G63620 29.268 369 239 13 14 368 57 417 2.53e-32 126
MS.gene069804.t1 AT5G63620 28.455 369 246 12 14 370 57 419 2.91e-32 126
MS.gene069804.t1 AT5G63620 30.980 255 161 9 14 257 57 307 2.06e-25 105
MS.gene069804.t1 AT5G51970 25.429 350 206 12 37 367 41 354 4.04e-17 82.4
MS.gene069804.t1 AT5G51970 25.429 350 206 12 37 367 41 354 4.04e-17 82.4

Find 91 sgRNAs with CRISPR-Local

Find 288 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGACAAGATTTACAGTAAA+AGG 0.163487 6.2:-72242144 MS.gene069804:CDS
AACTAATATTTGTCAAGTTT+TGG 0.171217 6.2:-72242202 MS.gene069804:CDS
GCCATATTTCCTCGCATATT+TGG 0.189832 6.2:-72243007 MS.gene069804:CDS
ACCATTGGAGATTAGGATTA+AGG 0.205928 6.2:-72244086 MS.gene069804:CDS
GCCAAATATGCGAGGAAATA+TGG 0.248039 6.2:+72243006 None:intergenic
CTGACAGGAAGAACTTTAAA+AGG 0.257915 6.2:-72240721 MS.gene069804:CDS
TACCACACAGCTAAATCTTT+TGG 0.263883 6.2:-72241218 MS.gene069804:intron
GGATCCACAGTGGTTATATT+TGG 0.292524 6.2:-72241622 MS.gene069804:CDS
AGGGGTGCATCTAGAATAAT+TGG 0.320329 6.2:-72241370 MS.gene069804:CDS
AATCCACAGAAGTGTGAAAA+TGG 0.320595 6.2:-72241337 MS.gene069804:intron
GGAACTGCACTCACCTTTGC+AGG 0.322567 6.2:+72244279 None:intergenic
GAATACACAGTTGTTCATTC+TGG 0.335258 6.2:-72242081 MS.gene069804:CDS
CTCCTCAACCATTGGAGATT+AGG 0.340698 6.2:-72244093 MS.gene069804:CDS
TCTAGATGCACCCCTTAGTT+TGG 0.343778 6.2:+72241378 None:intergenic
CCTGAGATGTCAGCTCATTA+TGG 0.348801 6.2:-72240751 MS.gene069804:CDS
ACTTTAAAAGGATCTTTATT+CGG 0.356032 6.2:-72240709 MS.gene069804:CDS
GACATCTCAGGCTTCACCTT+TGG 0.385095 6.2:+72240763 None:intergenic
TCATGCAGGCTGTGCAAATC+AGG 0.386476 6.2:-72242228 MS.gene069804:CDS
TCGTAGTGATCTTTCTGCTT+GGG 0.388667 6.2:-72244044 MS.gene069804:CDS
ATATTTGGCCACGAAGCATC+TGG 0.392686 6.2:-72242992 MS.gene069804:CDS
GGCATTGGTGATGGAGGAAG+TGG 0.403806 6.2:-72244125 MS.gene069804:CDS
CTTAGCTGTGGGGTTTCTGC+AGG 0.404405 6.2:-72242009 MS.gene069804:intron
TTGCACAAGGGGCCAAACTA+AGG 0.405871 6.2:-72241390 MS.gene069804:CDS
CAAAATTCAAGGAATTATCT+TGG 0.409845 6.2:+72239941 None:intergenic
CTTTGCAGGTTATGACTTGA+GGG 0.413577 6.2:+72244293 None:intergenic
ATATTTGGTCTTGGAACTGT+TGG 0.421795 6.2:-72241607 MS.gene069804:CDS
GTGTTATGTAGTCATCAATC+TGG 0.423973 6.2:+72240044 None:intergenic
ACACCGCAATAATGATAAAC+AGG 0.427206 6.2:+72242117 None:intergenic
CCTTTGCAGGTTATGACTTG+AGG 0.431283 6.2:+72244292 None:intergenic
ACAGTGGTTATATTTGGTCT+TGG 0.438849 6.2:-72241616 MS.gene069804:CDS
CCATAATGAGCTGACATCTC+AGG 0.446817 6.2:+72240751 None:intergenic
GTCGTAGTGATCTTTCTGCT+TGG 0.448380 6.2:-72244045 MS.gene069804:CDS
CCTTGTTTACAACAGGGGTG+GGG 0.461095 6.2:-72240808 MS.gene069804:intron
GCTGCAGTAGCATGGGGAGC+TGG 0.479502 6.2:-72244151 MS.gene069804:CDS
AGCTGGAGAGGCATTGGTGA+TGG 0.483911 6.2:-72244134 MS.gene069804:CDS
AGACAAGATTTACAGTAAAA+GGG 0.484730 6.2:-72242143 MS.gene069804:CDS
AAGGATCTTTATTCGGAGGA+TGG 0.488243 6.2:-72240702 MS.gene069804:CDS
ATGGGGAGCTGGAGAGGCAT+TGG 0.489033 6.2:-72244140 MS.gene069804:CDS
AAATATGCATTCTTAGCTGT+GGG 0.493066 6.2:-72242020 MS.gene069804:CDS
ACAAACAGCTGCAGTAGCAT+GGG 0.502030 6.2:-72244158 MS.gene069804:intron
GCAGGATTGTTGAGAGCGTA+GGG 0.505817 6.2:-72242314 MS.gene069804:intron
TGCAGGATTGTTGAGAGCGT+AGG 0.508503 6.2:-72242315 MS.gene069804:intron
ATTGTTGAGAGCGTAGGGCT+AGG 0.509736 6.2:-72242309 MS.gene069804:CDS
ATCCTAATCTCCAATGGTTG+AGG 0.520022 6.2:+72244091 None:intergenic
TAGGAGAATGCATGTCATGC+AGG 0.520032 6.2:-72242242 MS.gene069804:CDS
AGTCAGTCCTCCTCAACCAT+TGG 0.520494 6.2:-72244101 MS.gene069804:CDS
TGCACAAGGGGCCAAACTAA+GGG 0.521604 6.2:-72241389 MS.gene069804:CDS
AACAAACAGCTGCAGTAGCA+TGG 0.525473 6.2:-72244159 MS.gene069804:intron
GAATAATCGACCTGCACGAT+AGG 0.525925 6.2:+72241158 None:intergenic
ATTAAGTGCATTACTGATGG+TGG 0.526528 6.2:-72241045 MS.gene069804:CDS
TGGGGCTTGACTGTTACACT+TGG 0.533827 6.2:-72240790 MS.gene069804:CDS
ACATACTTCTCTACTAATGA+AGG 0.534955 6.2:+72240661 None:intergenic
TAGATTACCCAGATGCTTCG+TGG 0.537317 6.2:+72242984 None:intergenic
GGAGTGACTGAATTCAAAGA+AGG 0.538722 6.2:-72242288 MS.gene069804:CDS
TTAAGTGCATTACTGATGGT+GGG 0.539038 6.2:-72241044 MS.gene069804:CDS
CATTATGGACTATTCCTGAC+AGG 0.543387 6.2:-72240736 MS.gene069804:CDS
TTAAAAGGATCTTTATTCGG+AGG 0.548166 6.2:-72240706 MS.gene069804:CDS
GCTTTCAATCTCATGAAAGA+AGG 0.550205 6.2:-72239992 MS.gene069804:CDS
GTTATTAAGTGCATTACTGA+TGG 0.552179 6.2:-72241048 MS.gene069804:CDS
AAAATATGCATTCTTAGCTG+TGG 0.552327 6.2:-72242021 MS.gene069804:CDS
CCTATTCAATAGGTTGCACA+AGG 0.568491 6.2:-72241403 MS.gene069804:intron
GAGTGACTGAATTCAAAGAA+GGG 0.576891 6.2:-72242287 MS.gene069804:CDS
GTACAAAGAACCTATCGTGC+AGG 0.585896 6.2:-72241168 MS.gene069804:intron
AGTAGCATGGGGAGCTGGAG+AGG 0.586768 6.2:-72244146 MS.gene069804:CDS
TGGAGAGGCATTGGTGATGG+AGG 0.587850 6.2:-72244131 MS.gene069804:CDS
TAAGTGCATTACTGATGGTG+GGG 0.591863 6.2:-72241043 MS.gene069804:CDS
AAGCCTGTTTATCATTATTG+CGG 0.594521 6.2:-72242120 MS.gene069804:CDS
CAAGGAATTATCTTGGCATG+TGG 0.595504 6.2:+72239948 None:intergenic
CCTCAAGTCATAACCTGCAA+AGG 0.598569 6.2:-72244292 MS.gene069804:intron
ACCTTAATCCTAATCTCCAA+TGG 0.599263 6.2:+72244085 None:intergenic
AATGTTGCCGATGTGACAAA+AGG 0.599429 6.2:-72241643 MS.gene069804:CDS
ATAGGTTCTTTGTACAAACT+CGG 0.599694 6.2:+72241176 None:intergenic
CTAATCTCCAATGGTTGAGG+AGG 0.600166 6.2:+72244094 None:intergenic
CAATAGGTCTAGGTGCAGCA+TGG 0.604039 6.2:-72241666 MS.gene069804:intron
CTATGAAAACTGTTAACACA+TGG 0.605315 6.2:+72242262 None:intergenic
TATTTGGCCACGAAGCATCT+GGG 0.608176 6.2:-72242991 MS.gene069804:intron
TATTCAATAGGTTGCACAAG+GGG 0.615252 6.2:-72241401 MS.gene069804:intron
TTTGCAGGTTATGACTTGAG+GGG 0.620062 6.2:+72244294 None:intergenic
ATCACTACGACAAAGAGAGG+TGG 0.635585 6.2:+72244057 None:intergenic
AAGATCACTACGACAAAGAG+AGG 0.642771 6.2:+72244054 None:intergenic
GCACAAGGGGCCAAACTAAG+GGG 0.646651 6.2:-72241388 MS.gene069804:CDS
TGTTACACTTGGTGTGCCAA+AGG 0.647519 6.2:-72240779 MS.gene069804:CDS
ACAGCATGATTGCAATGCAG+TGG 0.658129 6.2:+72240978 None:intergenic
AGTAGAGAAGTATGTCAACA+AGG 0.658436 6.2:-72240653 MS.gene069804:intron
AGTGACTGAATTCAAAGAAG+GGG 0.664041 6.2:-72242286 MS.gene069804:CDS
AATATGCATTCTTAGCTGTG+GGG 0.673736 6.2:-72242019 MS.gene069804:CDS
CAAACAGCTGCAGTAGCATG+GGG 0.680428 6.2:-72244157 MS.gene069804:intron
GCTTCGTGGCCAAATATGCG+AGG 0.691472 6.2:+72242998 None:intergenic
CTATTCAATAGGTTGCACAA+GGG 0.695720 6.2:-72241402 MS.gene069804:intron
AAGACCAAATATAACCACTG+TGG 0.739475 6.2:+72241618 None:intergenic
TGTGACAAAAGGATCCACAG+TGG 0.822984 6.2:-72241632 MS.gene069804:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GATATTGAAAATAATAAAAT+TGG + chr6.2:72240528-72240547 None:intergenic 10.0%
!! AAAAAATACTAAAAAGGAAA+TGG + chr6.2:72240014-72240033 None:intergenic 15.0%
!! AAAAATACTAAAAAGGAAAT+GGG + chr6.2:72240013-72240032 None:intergenic 15.0%
!! AAAAATATTTACATTGAACA+TGG + chr6.2:72240346-72240365 None:intergenic 15.0%
!! AAAATAAATTCAGAGTAATT+TGG + chr6.2:72242973-72242992 None:intergenic 15.0%
!! ATACTGAATATAAAACTAAA+TGG - chr6.2:72241204-72241223 MS.gene069804:CDS 15.0%
!! ATATCTATAGAAAACAAAAA+AGG + chr6.2:72240758-72240777 None:intergenic 15.0%
!! TATAGTTAATAATAAACACT+TGG + chr6.2:72242294-72242313 None:intergenic 15.0%
!! TATATTAAAAAATTAAGGGT+AGG + chr6.2:72244048-72244067 None:intergenic 15.0%
!! TATCTATAGAAAACAAAAAA+GGG + chr6.2:72240757-72240776 None:intergenic 15.0%
!! TGATTTACTAATATATATCA+AGG + chr6.2:72240319-72240338 None:intergenic 15.0%
!!! GTTTAATTTTGATACATTAT+CGG + chr6.2:72240469-72240488 None:intergenic 15.0%
!!! TATGAAAGAGATTTTATTTT+TGG - chr6.2:72244072-72244091 MS.gene069804:CDS 15.0%
!!! TTTATTTTTAAACCTTAGAA+CGG - chr6.2:72242985-72243004 MS.gene069804:intron 15.0%
!! AAATTGAAACATAAGGTTTA+AGG - chr6.2:72242316-72242335 MS.gene069804:intron 20.0%
!! AAGAATAAATATTCATTAGC+AGG + chr6.2:72241161-72241180 None:intergenic 20.0%
!! AGAATATAAGATAGATATAG+TGG + chr6.2:72242712-72242731 None:intergenic 20.0%
!! ATAAAATCATGCTTAGATAA+AGG + chr6.2:72243666-72243685 None:intergenic 20.0%
!! ATCTATAGAAAACAACTAAT+TGG + chr6.2:72240559-72240578 None:intergenic 20.0%
!! CATACATATCAAAACAAATA+TGG + chr6.2:72240051-72240070 None:intergenic 20.0%
!! CTATAAGAAATTGAAACATA+AGG - chr6.2:72242309-72242328 MS.gene069804:CDS 20.0%
!! GATATGATAAATAAATATGC+AGG - chr6.2:72244197-72244216 MS.gene069804:intron 20.0%
!! TCGATAATAATTTGAGAAAA+TGG + chr6.2:72240986-72241005 None:intergenic 20.0%
!! TCTTCAAATAAAACAACTAA+AGG + chr6.2:72241351-72241370 None:intergenic 20.0%
!! TTTAACCAAATTATTGCAAA+AGG - chr6.2:72241888-72241907 MS.gene069804:intron 20.0%
!! TTTGTTTGTTTCATAAACAA+TGG + chr6.2:72240095-72240114 None:intergenic 20.0%
!!! AACTAATATTTGTCAAGTTT+TGG - chr6.2:72242066-72242085 MS.gene069804:CDS 20.0%
!!! ACTAATATTTGTCAAGTTTT+GGG - chr6.2:72242067-72242086 MS.gene069804:CDS 20.0%
!!! ACTTTAAAAGGATCTTTATT+CGG - chr6.2:72243559-72243578 MS.gene069804:intron 20.0%
!!! AGAGATTTTATTTTTGGATA+AGG - chr6.2:72244078-72244097 MS.gene069804:CDS 20.0%
!!! TACTAGTTAGTTATTTTCAA+GGG - chr6.2:72242478-72242497 MS.gene069804:intron 20.0%
!!! TTGTTTTCTATAGATATTGT+CGG - chr6.2:72240761-72240780 MS.gene069804:CDS 20.0%
!!! TTTCTAAAGTCAAACATTAA+TGG - chr6.2:72240427-72240446 MS.gene069804:intron 20.0%
! AAGACAAGATTTACAGTAAA+AGG - chr6.2:72242124-72242143 MS.gene069804:CDS 25.0%
! AAGTATGTTACAACAAGAAA+AGG + chr6.2:72243744-72243763 None:intergenic 25.0%
! AATAAAAGCTAATGAAAGCT+TGG - chr6.2:72241127-72241146 MS.gene069804:intron 25.0%
! AATAACTAACTAGTACTAGA+AGG + chr6.2:72242473-72242492 None:intergenic 25.0%
! AATTATATTGTGAACCTTGA+TGG + chr6.2:72241842-72241861 None:intergenic 25.0%
! ACGATAAGACAATATCAATA+GGG - chr6.2:72243876-72243895 MS.gene069804:intron 25.0%
! ACTATATTCAACATCTACTA+TGG + chr6.2:72241923-72241942 None:intergenic 25.0%
! AGACAAGATTTACAGTAAAA+GGG - chr6.2:72242125-72242144 MS.gene069804:CDS 25.0%
! AGATGTTGAATATAGTGTAA+TGG - chr6.2:72241927-72241946 MS.gene069804:intron 25.0%
! AGTATGTTACAACAAGAAAA+GGG + chr6.2:72243743-72243762 None:intergenic 25.0%
! ATGGAATTACATCTAACATA+AGG - chr6.2:72241223-72241242 MS.gene069804:intron 25.0%
! ATTCATCTATTAAGATCATG+AGG + chr6.2:72242817-72242836 None:intergenic 25.0%
! ATTTGTGTGTTGAAAATTTC+AGG - chr6.2:72243198-72243217 MS.gene069804:intron 25.0%
! CAACTTTGCATTATAACAAT+AGG - chr6.2:72242586-72242605 MS.gene069804:intron 25.0%
! TATAACAAAACATGACTTGA+GGG + chr6.2:72243333-72243352 None:intergenic 25.0%
! TATTGATATTGTCTTATCGT+CGG + chr6.2:72243876-72243895 None:intergenic 25.0%
! TCTTAAGAACTGTAATATGT+AGG + chr6.2:72241083-72241102 None:intergenic 25.0%
! TTATGTATATGCATGAGAAT+GGG - chr6.2:72241727-72241746 MS.gene069804:intron 25.0%
!! ACTTTTAAGCAAGACATTTT+AGG - chr6.2:72243776-72243795 MS.gene069804:intron 25.0%
!! ATCTTGTTTGACATGATTAA+TGG - chr6.2:72240872-72240891 MS.gene069804:intron 25.0%
!! ATGTCTTGCTTAAAAGTTTT+TGG + chr6.2:72243773-72243792 None:intergenic 25.0%
!! ATTAAGTTGTTTATCCAAAC+AGG - chr6.2:72243410-72243429 MS.gene069804:intron 25.0%
!! GATGATTCTCATTTTAAACT+CGG + chr6.2:72241577-72241596 None:intergenic 25.0%
!! TAATTTTCTTTTTGCTCTTG+AGG - chr6.2:72242790-72242809 MS.gene069804:intron 25.0%
!! TCATTTTAAACTCGGTAAAT+CGG + chr6.2:72241569-72241588 None:intergenic 25.0%
!! TGAAATTTTCAACACACAAA+TGG + chr6.2:72243199-72243218 None:intergenic 25.0%
!! TGTTTTCTATAGATATTGTC+GGG - chr6.2:72240762-72240781 MS.gene069804:CDS 25.0%
!! TTAAGTTGTTTATCCAAACA+GGG - chr6.2:72243411-72243430 MS.gene069804:intron 25.0%
!! TTACACCTTTTGCAATAATT+TGG + chr6.2:72241896-72241915 None:intergenic 25.0%
!!! CTCAAAGTTTTGTTTCTAAA+TGG - chr6.2:72242508-72242527 MS.gene069804:intron 25.0%
!!! GTACTAGTTAGTTATTTTCA+AGG - chr6.2:72242477-72242496 MS.gene069804:intron 25.0%
!!! TAGTTGTTTTCTATAGATGA+GGG - chr6.2:72240561-72240580 MS.gene069804:intron 25.0%
!!! TTAGTTGTTTTCTATAGATG+AGG - chr6.2:72240560-72240579 MS.gene069804:intron 25.0%
!!! TTTTGTTGTCTAAGTTATCA+TGG - chr6.2:72243843-72243862 MS.gene069804:intron 25.0%
AAAATATGCATTCTTAGCTG+TGG - chr6.2:72242247-72242266 MS.gene069804:CDS 30.0%
AAATATGCATTCTTAGCTGT+GGG - chr6.2:72242248-72242267 MS.gene069804:CDS 30.0%
AAGCCTGTTTATCATTATTG+CGG - chr6.2:72242148-72242167 MS.gene069804:CDS 30.0%
ACATACTTCTCTACTAATGA+AGG + chr6.2:72243610-72243629 None:intergenic 30.0%
ATAGGTTCTTTGTACAAACT+CGG + chr6.2:72243095-72243114 None:intergenic 30.0%
ATGTCAAACAAGATGTTGAT+TGG + chr6.2:72240866-72240885 None:intergenic 30.0%
ATTGGAGACAAGAAGTAAAA+AGG + chr6.2:72240510-72240529 None:intergenic 30.0%
CACTACAATAGATGAATCAT+TGG - chr6.2:72241514-72241533 MS.gene069804:intron 30.0%
CGATAAGACAATATCAATAG+GGG - chr6.2:72243877-72243896 MS.gene069804:intron 30.0%
CTAAGGAATAAAAATCCACA+AGG + chr6.2:72244141-72244160 None:intergenic 30.0%
CTATAACAAAACATGACTTG+AGG + chr6.2:72243334-72243353 None:intergenic 30.0%
CTATGAAAACTGTTAACACA+TGG + chr6.2:72242009-72242028 None:intergenic 30.0%
GACGATAAGACAATATCAAT+AGG - chr6.2:72243875-72243894 MS.gene069804:intron 30.0%
GTTATGTATATGCATGAGAA+TGG - chr6.2:72241726-72241745 MS.gene069804:intron 30.0%
GTTATTAAGTGCATTACTGA+TGG - chr6.2:72243220-72243239 MS.gene069804:intron 30.0%
TACACTTAATGTTCTACTGT+TGG - chr6.2:72241305-72241324 MS.gene069804:intron 30.0%
TATCCAATTACATCTCACAA+AGG + chr6.2:72240807-72240826 None:intergenic 30.0%
TGCATTATAACAATAGGTCT+AGG - chr6.2:72242592-72242611 MS.gene069804:intron 30.0%
TGCTTAATAAATACTGCCTA+AGG + chr6.2:72244158-72244177 None:intergenic 30.0%
TTAAAAGGATCTTTATTCGG+AGG - chr6.2:72243562-72243581 MS.gene069804:intron 30.0%
TTGGAGACAAGAAGTAAAAA+GGG + chr6.2:72240509-72240528 None:intergenic 30.0%
! AATGAAGGAAGATCAGTTTT+AGG + chr6.2:72243595-72243614 None:intergenic 30.0%
! AGAATGCATATTTTCTCAAG+AGG + chr6.2:72242241-72242260 None:intergenic 30.0%
! ATCTTTCCTTGTTTACAACA+GGG - chr6.2:72243454-72243473 MS.gene069804:intron 30.0%
! CATGTGTTAACAGTTTTCAT+AGG - chr6.2:72242007-72242026 MS.gene069804:intron 30.0%
! CTTGTGGATTTTTATTCCTT+AGG - chr6.2:72244139-72244158 MS.gene069804:CDS 30.0%
! TATCTTTCCTTGTTTACAAC+AGG - chr6.2:72243453-72243472 MS.gene069804:intron 30.0%
!! AGTTGTTTTCTATAGATGAG+GGG - chr6.2:72240562-72240581 MS.gene069804:intron 30.0%
!! ATATAGTGTAATGGTTTTGC+AGG - chr6.2:72241936-72241955 MS.gene069804:intron 30.0%
!! CAGTTTTAATCTGGAAGTAT+TGG + chr6.2:72240912-72240931 None:intergenic 30.0%
!! CATAAGGTGTTTTTATATGC+AGG - chr6.2:72241239-72241258 MS.gene069804:intron 30.0%
!!! AGTTTTGTTTCTAAATGGAC+AGG - chr6.2:72242513-72242532 MS.gene069804:intron 30.0%
!!! TATTTGTCAAGTTTTGGGAT+TGG - chr6.2:72242072-72242091 MS.gene069804:CDS 30.0%
AACTAACTAGTACTAGAAGG+TGG + chr6.2:72242470-72242489 None:intergenic 35.0%
AAGACCAAATATAACCACTG+TGG + chr6.2:72242653-72242672 None:intergenic 35.0%
AATATGCATTCTTAGCTGTG+GGG - chr6.2:72242249-72242268 MS.gene069804:CDS 35.0%
AATTTACAGCTATGGCTAGT+TGG + chr6.2:72241763-72241782 None:intergenic 35.0%
ACACCGCAATAATGATAAAC+AGG + chr6.2:72242154-72242173 None:intergenic 35.0%
ACAGTGGTTATATTTGGTCT+TGG - chr6.2:72242652-72242671 MS.gene069804:intron 35.0%
ACATAAAGTGACACTCAGTA+TGG + chr6.2:72242363-72242382 None:intergenic 35.0%
ACATTGATCAACTATGGGAA+TGG - chr6.2:72241467-72241486 MS.gene069804:intron 35.0%
ACCATTGGAGATTAGGATTA+AGG - chr6.2:72240182-72240201 MS.gene069804:intron 35.0%
ACCTTAATCCTAATCTCCAA+TGG + chr6.2:72240186-72240205 None:intergenic 35.0%
ACTGAAGTAACAACATGTGT+CGG + chr6.2:72240959-72240978 None:intergenic 35.0%
AGAGTGACATTGATCAACTA+TGG - chr6.2:72241461-72241480 MS.gene069804:intron 35.0%
AGTCATGTCTATGTGAATTG+CGG + chr6.2:72241869-72241888 None:intergenic 35.0%
AGTGACTGAATTCAAAGAAG+GGG - chr6.2:72241982-72242001 MS.gene069804:intron 35.0%
ATTAAGTGCATTACTGATGG+TGG - chr6.2:72243223-72243242 MS.gene069804:intron 35.0%
ATTACTCAGAAGTAGTCCTA+CGG + chr6.2:72242404-72242423 None:intergenic 35.0%
CAATCCAGGTCCATAAAAAA+TGG - chr6.2:72241659-72241678 MS.gene069804:CDS 35.0%
CAGGTCCATAAAAAATGGTA+GGG - chr6.2:72241664-72241683 MS.gene069804:intron 35.0%
CTATTCAATAGGTTGCACAA+GGG - chr6.2:72242866-72242885 MS.gene069804:intron 35.0%
CTGACAGGAAGAACTTTAAA+AGG - chr6.2:72243547-72243566 MS.gene069804:intron 35.0%
GAATACACAGTTGTTCATTC+TGG - chr6.2:72242187-72242206 MS.gene069804:CDS 35.0%
GAGTGACATTGATCAACTAT+GGG - chr6.2:72241462-72241481 MS.gene069804:intron 35.0%
GAGTGACTGAATTCAAAGAA+GGG - chr6.2:72241981-72242000 MS.gene069804:intron 35.0%
GCTTTCAATCTCATGAAAGA+AGG - chr6.2:72244276-72244295 MS.gene069804:intron 35.0%
GTCTAAGTTATCATGGTCAT+TGG - chr6.2:72243850-72243869 MS.gene069804:intron 35.0%
GTGTTATGTAGTCATCAATC+TGG + chr6.2:72244227-72244246 None:intergenic 35.0%
TATTCAATAGGTTGCACAAG+GGG - chr6.2:72242867-72242886 MS.gene069804:intron 35.0%
TCATGACTCTCCTATTCAAT+AGG - chr6.2:72242855-72242874 MS.gene069804:intron 35.0%
TCGGTAAATCGGATTTCAAA+CGG + chr6.2:72241558-72241577 None:intergenic 35.0%
TCTTGTGTAAAAACAGGGTA+AGG - chr6.2:72240657-72240676 MS.gene069804:CDS 35.0%
TGAATAGGAGAGTCATGATT+TGG + chr6.2:72242853-72242872 None:intergenic 35.0%
TTAAGTGCATTACTGATGGT+GGG - chr6.2:72243224-72243243 MS.gene069804:intron 35.0%
TTTCTGTAAGTCCAAGTACT+CGG - chr6.2:72242686-72242705 MS.gene069804:intron 35.0%
! AATCCACAGAAGTGTGAAAA+TGG - chr6.2:72242931-72242950 MS.gene069804:intron 35.0%
! ACCACACAGCTAAATCTTTT+GGG - chr6.2:72243051-72243070 MS.gene069804:intron 35.0%
! AGTAGAGAAGTATGTCAACA+AGG - chr6.2:72243615-72243634 MS.gene069804:intron 35.0%
! GAATTCTCTTTGTGCTTTTG+CGG + chr6.2:72242743-72242762 None:intergenic 35.0%
! TACCACACAGCTAAATCTTT+TGG - chr6.2:72243050-72243069 MS.gene069804:intron 35.0%
! TCTTTCCTTGTTTACAACAG+GGG - chr6.2:72243455-72243474 MS.gene069804:intron 35.0%
! TTACCATTTTCACACTTCTG+TGG + chr6.2:72242937-72242956 None:intergenic 35.0%
! TTGATGGTACAGCAAAATAC+AGG + chr6.2:72241826-72241845 None:intergenic 35.0%
!! ATATTTGGTCTTGGAACTGT+TGG - chr6.2:72242661-72242680 MS.gene069804:intron 35.0%
!! ATTTTCTCAAGAGGTACATG+AGG + chr6.2:72242232-72242251 None:intergenic 35.0%
!! GATTTCTGTTTTGAATGTGC+AGG - chr6.2:72243250-72243269 MS.gene069804:intron 35.0%
!! TGTATTTTGCTGTACCATCA+AGG - chr6.2:72241825-72241844 MS.gene069804:intron 35.0%
!!! AGTTTTGGGATTGGAAAGAA+AGG - chr6.2:72242081-72242100 MS.gene069804:CDS 35.0%
!!! CTTTTAAAGTTCTTCCTGTC+AGG + chr6.2:72243549-72243568 None:intergenic 35.0%
!!! GTTTTGGGATTGGAAAGAAA+GGG - chr6.2:72242082-72242101 MS.gene069804:CDS 35.0%
!!! TGTGTGATATTTTGACCGTA+AGG + chr6.2:72241496-72241515 None:intergenic 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG + chr6.2:72240658-72240677 None:intergenic 35.0%
AAGATCACTACGACAAAGAG+AGG + chr6.2:72240217-72240236 None:intergenic 40.0%
AAGGATCTTTATTCGGAGGA+TGG - chr6.2:72243566-72243585 MS.gene069804:intron 40.0%
AATGTTGCCGATGTGACAAA+AGG - chr6.2:72242625-72242644 MS.gene069804:intron 40.0%
AATTCAAGTCAGACCCTGTT+TGG + chr6.2:72243427-72243446 None:intergenic 40.0%
ACAGCCTCTTGTGTAAAAAC+AGG - chr6.2:72240651-72240670 MS.gene069804:intron 40.0%
ACATCTATGTGAGACATCGT+CGG + chr6.2:72243998-72244017 None:intergenic 40.0%
ACGCATTTACTGCAGATAGT+AGG + chr6.2:72241622-72241641 None:intergenic 40.0%
AGACAAGAAGTAAAAAGGGC+AGG + chr6.2:72240505-72240524 None:intergenic 40.0%
AGAGATTATGAGCCGTTCTA+AGG + chr6.2:72243000-72243019 None:intergenic 40.0%
AGTATGGACGAAGAGATTAC+TGG + chr6.2:72242347-72242366 None:intergenic 40.0%
ATCCTAATCTCCAATGGTTG+AGG + chr6.2:72240180-72240199 None:intergenic 40.0%
ATGCGTGATACTATGACTGA+AGG - chr6.2:72241636-72241655 MS.gene069804:CDS 40.0%
ATTTACTGCAGATAGTAGGC+TGG + chr6.2:72241618-72241637 None:intergenic 40.0%
CAGCCTCTTGTGTAAAAACA+GGG - chr6.2:72240652-72240671 MS.gene069804:intron 40.0%
CCAGGTCCATAAAAAATGGT+AGG - chr6.2:72241663-72241682 MS.gene069804:CDS 40.0%
CCTATTCAATAGGTTGCACA+AGG - chr6.2:72242865-72242884 MS.gene069804:intron 40.0%
CCTTGTGCAACCTATTGAAT+AGG + chr6.2:72242868-72242887 None:intergenic 40.0%
CGGTAAATCGGATTTCAAAC+GGG + chr6.2:72241557-72241576 None:intergenic 40.0%
CGTACAATACACCAAATGGT+CGG - chr6.2:72240683-72240702 MS.gene069804:CDS 40.0%
CTAGCCATAGCTGTAAATTG+CGG - chr6.2:72241764-72241783 MS.gene069804:intron 40.0%
CTGAAGTAACAACATGTGTC+GGG + chr6.2:72240958-72240977 None:intergenic 40.0%
CTTTGCAGGTTATGACTTGA+GGG + chr6.2:72239978-72239997 None:intergenic 40.0%
GAAAACAAAAAAGGGCAACC+CGG + chr6.2:72240749-72240768 None:intergenic 40.0%
GACAATATCAATAGGGGTTG+AGG - chr6.2:72243883-72243902 MS.gene069804:intron 40.0%
GAGTACTTGGACTTACAGAA+AGG + chr6.2:72242687-72242706 None:intergenic 40.0%
GCCAAATATGCGAGGAAATA+TGG + chr6.2:72241265-72241284 None:intergenic 40.0%
GCCATATTTCCTCGCATATT+TGG - chr6.2:72241261-72241280 MS.gene069804:intron 40.0%
GGAGTGACTGAATTCAAAGA+AGG - chr6.2:72241980-72241999 MS.gene069804:intron 40.0%
GGATCCACAGTGGTTATATT+TGG - chr6.2:72242646-72242665 MS.gene069804:intron 40.0%
GGTCCTTTGTGAGATGTAAT+TGG - chr6.2:72240801-72240820 MS.gene069804:intron 40.0%
GTGCAATTGTGCTGTGAAAT+TGG + chr6.2:72243153-72243172 None:intergenic 40.0%
GTTGTTGTCATGTGACTGTA+AGG - chr6.2:72240607-72240626 MS.gene069804:intron 40.0%
TAACTAGTACTAGAAGGTGG+TGG + chr6.2:72242467-72242486 None:intergenic 40.0%
TCCCAAAAGATTTAGCTGTG+TGG + chr6.2:72243055-72243074 None:intergenic 40.0%
TCGGGTCATCATACAAGAAT+TGG - chr6.2:72240780-72240799 MS.gene069804:CDS 40.0%
TCGTAGTGATCTTTCTGCTT+GGG - chr6.2:72240224-72240243 MS.gene069804:intron 40.0%
TGAAGTAACAACATGTGTCG+GGG + chr6.2:72240957-72240976 None:intergenic 40.0%
TTACTCAGAAGTAGTCCTAC+GGG + chr6.2:72242403-72242422 None:intergenic 40.0%
TTTGCAGGTTATGACTTGAG+GGG + chr6.2:72239977-72239996 None:intergenic 40.0%
! AGGGGTGCATCTAGAATAAT+TGG - chr6.2:72242898-72242917 MS.gene069804:intron 40.0%
! CATTATGGACTATTCCTGAC+AGG - chr6.2:72243532-72243551 MS.gene069804:intron 40.0%
! CTATGGGAATGGATTCCTTA+CGG - chr6.2:72241478-72241497 MS.gene069804:intron 40.0%
! TAAGTGCATTACTGATGGTG+GGG - chr6.2:72243225-72243244 MS.gene069804:intron 40.0%
! TGTGGATCCTTTTGTCACAT+CGG + chr6.2:72242635-72242654 None:intergenic 40.0%
! TTCATGTGCTTTTCTCCTTG+TGG - chr6.2:72244123-72244142 MS.gene069804:CDS 40.0%
!! CGTCAGACACAGTTTTAATC+TGG + chr6.2:72240921-72240940 None:intergenic 40.0%
!!! CCTACCATTTTTTATGGACC+TGG + chr6.2:72241666-72241685 None:intergenic 40.0%
!!! CTGCACCCTACCATTTTTTA+TGG + chr6.2:72241672-72241691 None:intergenic 40.0%
AACAAACAGCTGCAGTAGCA+TGG - chr6.2:72240109-72240128 MS.gene069804:intron 45.0%
ACAAACAGCTGCAGTAGCAT+GGG - chr6.2:72240110-72240129 MS.gene069804:intron 45.0%
ACAGCATGATTGCAATGCAG+TGG + chr6.2:72243293-72243312 None:intergenic 45.0%
ACATCGTCGGACATTCAATG+TGG + chr6.2:72243985-72244004 None:intergenic 45.0%
ACTATGACTGAAGGCAATCC+AGG - chr6.2:72241645-72241664 MS.gene069804:CDS 45.0%
AGATAGTAGGCTGGAATCGT+TGG + chr6.2:72241609-72241628 None:intergenic 45.0%
AGATATAGTGGCCGAGTACT+TGG + chr6.2:72242700-72242719 None:intergenic 45.0%
AGGACTAATCTCCCACAATG+TGG - chr6.2:72243915-72243934 MS.gene069804:intron 45.0%
ATCACTACGACAAAGAGAGG+TGG + chr6.2:72240214-72240233 None:intergenic 45.0%
ATGTCACTCTAACTGAGCGT+TGG + chr6.2:72241451-72241470 None:intergenic 45.0%
CAAATGCAATTGCGGCACAT+TGG - chr6.2:72241791-72241810 MS.gene069804:intron 45.0%
CAACTTTACCAGTTGTGCCA+AGG + chr6.2:72240591-72240610 None:intergenic 45.0%
CAGACCGCAATTTACAGCTA+TGG + chr6.2:72241771-72241790 None:intergenic 45.0%
CCATAATGAGCTGACATCTC+AGG + chr6.2:72243520-72243539 None:intergenic 45.0%
CCTCAAGTCATAACCTGCAA+AGG - chr6.2:72239976-72239995 MS.gene069804:CDS 45.0%
CCTGAGATGTCAGCTCATTA+TGG - chr6.2:72243517-72243536 MS.gene069804:intron 45.0%
CCTTTGCAGGTTATGACTTG+AGG + chr6.2:72239979-72239998 None:intergenic 45.0%
CTAATCTCCAATGGTTGAGG+AGG + chr6.2:72240177-72240196 None:intergenic 45.0%
CTATAGATGAGGGGTAACCT+TGG - chr6.2:72240571-72240590 MS.gene069804:intron 45.0%
CTCCTCAACCATTGGAGATT+AGG - chr6.2:72240175-72240194 MS.gene069804:intron 45.0%
GAATAATCGACCTGCACGAT+AGG + chr6.2:72243113-72243132 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG - chr6.2:72240679-72240698 MS.gene069804:CDS 45.0%
GTACAAAGAACCTATCGTGC+AGG - chr6.2:72243100-72243119 MS.gene069804:intron 45.0%
GTCATGTGACTGTAAGGTCA+CGG - chr6.2:72240613-72240632 MS.gene069804:intron 45.0%
GTCGTAGTGATCTTTCTGCT+TGG - chr6.2:72240223-72240242 MS.gene069804:intron 45.0%
TAGATTACCCAGATGCTTCG+TGG + chr6.2:72241287-72241306 None:intergenic 45.0%
TAGGAGAATGCATGTCATGC+AGG - chr6.2:72242026-72242045 MS.gene069804:CDS 45.0%
TCATGTGACTGTAAGGTCAC+GGG - chr6.2:72240614-72240633 MS.gene069804:intron 45.0%
TCTAGATGCACCCCTTAGTT+TGG + chr6.2:72242893-72242912 None:intergenic 45.0%
TGTGACAAAAGGATCCACAG+TGG - chr6.2:72242636-72242655 MS.gene069804:intron 45.0%
! AGTCCTACGGGTTACACAAT+GGG + chr6.2:72242391-72242410 None:intergenic 45.0%
! ATATTTGGCCACGAAGCATC+TGG - chr6.2:72241276-72241295 MS.gene069804:intron 45.0%
! ATTGGTGGTTTGCCACATTG+TGG + chr6.2:72243930-72243949 None:intergenic 45.0%
! TAGTCCTACGGGTTACACAA+TGG + chr6.2:72242392-72242411 None:intergenic 45.0%
! TATTTGGCCACGAAGCATCT+GGG - chr6.2:72241277-72241296 MS.gene069804:intron 45.0%
! TCCTTGTTTACAACAGGGGT+GGG - chr6.2:72243459-72243478 MS.gene069804:intron 45.0%
! TTACACAAGAGGCTGTTTCC+AGG + chr6.2:72240647-72240666 None:intergenic 45.0%
! TTCCTTGTTTACAACAGGGG+TGG - chr6.2:72243458-72243477 MS.gene069804:intron 45.0%
! TTGGTGGTTTGCCACATTGT+GGG + chr6.2:72243929-72243948 None:intergenic 45.0%
!! AAGGTGGTGGAAATTCGCTA+TGG + chr6.2:72242454-72242473 None:intergenic 45.0%
!! TGTTACACTTGGTGTGCCAA+AGG - chr6.2:72243489-72243508 MS.gene069804:intron 45.0%
!! AAAAAAAAAAAATACTAAAA+AGG + chr6.2:72240020-72240039 None:intergenic 5.0%
!! ATGTTTATATTAAAAAATTA+AGG + chr6.2:72244053-72244072 None:intergenic 5.0%
!! TGTTTATATTAAAAAATTAA+GGG + chr6.2:72244052-72244071 None:intergenic 5.0%
!!! TTTTATATATTTTTACTTTA+TGG - chr6.2:72243680-72243699 MS.gene069804:intron 5.0%
AGGGGTTGAGGCTAGAAGAA+AGG - chr6.2:72243895-72243914 MS.gene069804:intron 50.0%
AGTAGGCTGGAATCGTTGGA+CGG + chr6.2:72241605-72241624 None:intergenic 50.0%
AGTCAGTCCTCCTCAACCAT+TGG - chr6.2:72240167-72240186 MS.gene069804:intron 50.0%
ATTAAAGCTCCCGCGTACAC+AGG + chr6.2:72240723-72240742 None:intergenic 50.0%
CAAACAGCTGCAGTAGCATG+GGG - chr6.2:72240111-72240130 MS.gene069804:intron 50.0%
CAATAGGTCTAGGTGCAGCA+TGG - chr6.2:72242602-72242621 MS.gene069804:intron 50.0%
GACATCTCAGGCTTCACCTT+TGG + chr6.2:72243508-72243527 None:intergenic 50.0%
GCGGTCTGCAAATGCAATTG+CGG - chr6.2:72241783-72241802 MS.gene069804:intron 50.0%
GTGTGTTCTGCAGGTTTCTG+AGG + chr6.2:72242432-72242451 None:intergenic 50.0%
TCATGCAGGCTGTGCAAATC+AGG - chr6.2:72242040-72242059 MS.gene069804:CDS 50.0%
TGCACAAGGGGCCAAACTAA+GGG - chr6.2:72242879-72242898 MS.gene069804:intron 50.0%
TGGGGCTTGACTGTTACACT+TGG - chr6.2:72243478-72243497 MS.gene069804:intron 50.0%
TGTCCCATTGTGTAACCCGT+AGG - chr6.2:72242385-72242404 MS.gene069804:intron 50.0%
TTAAAGCTCCCGCGTACACA+GGG + chr6.2:72240722-72240741 None:intergenic 50.0%
TTCGCTATGGTGTGTTCTGC+AGG + chr6.2:72242441-72242460 None:intergenic 50.0%
TTGCACAAGGGGCCAAACTA+AGG - chr6.2:72242878-72242897 MS.gene069804:intron 50.0%
! ATTGTTGAGAGCGTAGGGCT+AGG - chr6.2:72241959-72241978 MS.gene069804:intron 50.0%
! CCTTGTTTACAACAGGGGTG+GGG - chr6.2:72243460-72243479 MS.gene069804:intron 50.0%
! GCAGGATTGTTGAGAGCGTA+GGG - chr6.2:72241954-72241973 MS.gene069804:intron 50.0%
! TGCAGGATTGTTGAGAGCGT+AGG - chr6.2:72241953-72241972 MS.gene069804:intron 50.0%
AAGGTCACGGGTTCAAGTCC+TGG - chr6.2:72240626-72240645 MS.gene069804:intron 55.0%
AGGGGTAACCTTGGCACAAC+TGG - chr6.2:72240580-72240599 MS.gene069804:intron 55.0%
CCCCACCCCTGTTGTAAACA+AGG + chr6.2:72243463-72243482 None:intergenic 55.0%
CTTAGCTGTGGGGTTTCTGC+AGG - chr6.2:72242259-72242278 MS.gene069804:CDS 55.0%
GCACAAGGGGCCAAACTAAG+GGG - chr6.2:72242880-72242899 MS.gene069804:intron 55.0%
GCTTCGTGGCCAAATATGCG+AGG + chr6.2:72241273-72241292 None:intergenic 55.0%
GGAACTGCACTCACCTTTGC+AGG + chr6.2:72239992-72240011 None:intergenic 55.0%
TGTGTCGGGGTAGTGAGTGT+TGG + chr6.2:72240944-72240963 None:intergenic 55.0%
! ACGCGGGAGCTTTAATGCAC+CGG - chr6.2:72240727-72240746 MS.gene069804:CDS 55.0%
!! AGCTGGAGAGGCATTGGTGA+TGG - chr6.2:72240134-72240153 MS.gene069804:intron 55.0%
!! GGCATTGGTGATGGAGGAAG+TGG - chr6.2:72240143-72240162 MS.gene069804:intron 55.0%
!! TGGAGAGGCATTGGTGATGG+AGG - chr6.2:72240137-72240156 MS.gene069804:intron 55.0%
AGTAGCATGGGGAGCTGGAG+AGG - chr6.2:72240122-72240141 MS.gene069804:intron 60.0%
CAAATGGTCGGACCCCTTCC+CGG - chr6.2:72240695-72240714 MS.gene069804:CDS 60.0%
! ATGGGGAGCTGGAGAGGCAT+TGG - chr6.2:72240128-72240147 MS.gene069804:intron 60.0%
! CGCGGGAGCTTTAATGCACC+GGG - chr6.2:72240728-72240747 MS.gene069804:CDS 60.0%
CGGGAAGGGGTCCGACCATT+TGG + chr6.2:72240697-72240716 None:intergenic 65.0%
CGTACACAGGGTCCGGGAAG+GGG + chr6.2:72240710-72240729 None:intergenic 65.0%
CTTCCCGGACCCTGTGTACG+CGG - chr6.2:72240710-72240729 MS.gene069804:CDS 65.0%
GCGTACACAGGGTCCGGGAA+GGG + chr6.2:72240711-72240730 None:intergenic 65.0%
GCTGCAGTAGCATGGGGAGC+TGG - chr6.2:72240117-72240136 MS.gene069804:intron 65.0%
TTCCCGGACCCTGTGTACGC+GGG - chr6.2:72240711-72240730 MS.gene069804:CDS 65.0%
CGCGTACACAGGGTCCGGGA+AGG + chr6.2:72240712-72240731 None:intergenic 70.0%
CTCCCGCGTACACAGGGTCC+GGG + chr6.2:72240716-72240735 None:intergenic 70.0%
GCTCCCGCGTACACAGGGTC+CGG + chr6.2:72240717-72240736 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 72239955 72244335 72239955 ID=MS.gene069804
chr6.2 mRNA 72239955 72244335 72239955 ID=MS.gene069804.t1;Parent=MS.gene069804
chr6.2 exon 72244293 72244335 72244293 ID=MS.gene069804.t1.exon1;Parent=MS.gene069804.t1
chr6.2 CDS 72244293 72244335 72244293 ID=cds.MS.gene069804.t1;Parent=MS.gene069804.t1
chr6.2 exon 72244036 72244172 72244036 ID=MS.gene069804.t1.exon2;Parent=MS.gene069804.t1
chr6.2 CDS 72244036 72244172 72244036 ID=cds.MS.gene069804.t1;Parent=MS.gene069804.t1
chr6.2 exon 72242992 72243029 72242992 ID=MS.gene069804.t1.exon3;Parent=MS.gene069804.t1
chr6.2 CDS 72242992 72243029 72242992 ID=cds.MS.gene069804.t1;Parent=MS.gene069804.t1
chr6.2 exon 72242010 72242332 72242010 ID=MS.gene069804.t1.exon4;Parent=MS.gene069804.t1
chr6.2 CDS 72242010 72242332 72242010 ID=cds.MS.gene069804.t1;Parent=MS.gene069804.t1
chr6.2 exon 72241600 72241682 72241600 ID=MS.gene069804.t1.exon5;Parent=MS.gene069804.t1
chr6.2 CDS 72241600 72241682 72241600 ID=cds.MS.gene069804.t1;Parent=MS.gene069804.t1
chr6.2 exon 72241338 72241413 72241338 ID=MS.gene069804.t1.exon6;Parent=MS.gene069804.t1
chr6.2 CDS 72241338 72241413 72241338 ID=cds.MS.gene069804.t1;Parent=MS.gene069804.t1
chr6.2 exon 72241169 72241230 72241169 ID=MS.gene069804.t1.exon7;Parent=MS.gene069804.t1
chr6.2 CDS 72241169 72241230 72241169 ID=cds.MS.gene069804.t1;Parent=MS.gene069804.t1
chr6.2 exon 72240975 72241070 72240975 ID=MS.gene069804.t1.exon8;Parent=MS.gene069804.t1
chr6.2 CDS 72240975 72241070 72240975 ID=cds.MS.gene069804.t1;Parent=MS.gene069804.t1
chr6.2 exon 72240654 72240815 72240654 ID=MS.gene069804.t1.exon9;Parent=MS.gene069804.t1
chr6.2 CDS 72240654 72240815 72240654 ID=cds.MS.gene069804.t1;Parent=MS.gene069804.t1
chr6.2 exon 72239955 72240071 72239955 ID=MS.gene069804.t1.exon10;Parent=MS.gene069804.t1
chr6.2 CDS 72239955 72240071 72239955 ID=cds.MS.gene069804.t1;Parent=MS.gene069804.t1
Gene Sequence

>MS.gene069804

ATGGCATCATCATCATCAGCCCCTCAAGTCATAACCTGCAAAGGTGAGTGCAGTTCCCATTTCCTTTTTAGTATTTTTTTTTTTTTTATCTTTCCATATTTGTTTTGATATGTATGTATGTATAAGTATGACTATGTCCATTGTTTATGAAACAAACAAACAGCTGCAGTAGCATGGGGAGCTGGAGAGGCATTGGTGATGGAGGAAGTGGAAGTCAGTCCTCCTCAACCATTGGAGATTAGGATTAAGGTTGTTTCCACCTCTCTTTGTCGTAGTGATCTTTCTGCTTGGGAAACTCATGTAAGTCTCTTATTTTATCATTATAGATTTAATTCATATACACGTTCAATGTGTAAGTAATCCTTGATATATATTAGTAAATCAAATACCATGTTCAATGTAAATATTTTTACAATGTCAATCAATCATAATTGTCAAATCGTTAAAAAAAGATCGACTTTAATCATAACTATTTCTAAAGTCAAACATTAATGGTGTAAAATTTTATACGCCGATAATGTATCAAAATTAAACTATATCATCATATCCTGCCCTTTTTACTTCTTGTCTCCAATTTTATTATTTTCAATATCACGAATTTCCAATTAGTTGTTTTCTATAGATGAGGGGTAACCTTGGCACAACTGGTAAAGTTGTTGTCATGTGACTGTAAGGTCACGGGTTCAAGTCCTGGAAACAGCCTCTTGTGTAAAAACAGGGTAAGGCTGCGTACAATACACCAAATGGTCGGACCCCTTCCCGGACCCTGTGTACGCGGGAGCTTTAATGCACCGGGTTGCCCTTTTTTGTTTTCTATAGATATTGTCGGGTCATCATACAAGAATTGGTCCTTTGTGAGATGTAATTGGATAAGATTATGCTTTTTTTCGTTTATGAGACAATGTATACCAATCAACATCTTGTTTGACATGATTAATGGTTAACTATGTAGCACCAATACTTCCAGATTAAAACTGTGTCTGACGCCAACACTCACTACCCCGACACATGTTGTTACTTCAGTCATTCCATTTTCTCAAATTATTATCGAGTGTTGACATTTTAGTGTTACTGTCTATCGTGTCTGATGTCAGTCACGATGTCAGTGCTTCATATGTGATTAATCCTACATATTACAGTTCTTAAGAGTATCACTGCTTGTGTTGTTTGTAAATAAAAGCTAATGAAAGCTTGGTAGATTAGCCTGCTAATGAATATTTATTCTTTTTTCATAAATTATTCTTTTTTTATACTGAATATAAAACTAAATGGAATTACATCTAACATAAGGTGTTTTTATATGCAGGCCATATTTCCTCGCATATTTGGCCACGAAGCATCTGGGTAATCTACACTTAATGTTCTACTGTTGGATTAATTAAACAATAGCGATCCTTTAGTTGTTTTATTTGAAGATCTTAAATAGAATTTGTCTTTCTTAGAGTTTCACAATTATCTAGTATGAATTTAGAATTAGATCAAATACTTAGAAACCAACGCTCAGTTAGAGTGACATTGATCAACTATGGGAATGGATTCCTTACGGTCAAAATATCACACACTACAATAGATGAATCATTGGATGAAGATCAAATGACTCCCGTTTGAAATCCGATTTACCGAGTTTAAAATGAGAATCATCTGATTCCGTCCAACGATTCCAGCCTACTATCTGCAGTAAATGCGTGATACTATGACTGAAGGCAATCCAGGTCCATAAAAAATGGTAGGGTGCAGCAGAAGCACAGCTGAATGTTACTGATGTTATAGAGTTATGTATATGCATGAGAATGGGATAGTTGTAGCCAACTAGCCATAGCTGTAAATTGCGGTCTGCAAATGCAATTGCGGCACATTGGCTTCATTTGCCTGTATTTTGCTGTACCATCAAGGTTCACAATATAATTGTAACCGCAATTCACATAGACATGACTTTAACCAAATTATTGCAAAAGGTGTAATTTTCCATAGTAGATGTTGAATATAGTGTAATGGTTTTGCAGGATTGTTGAGAGCGTAGGGCTAGGAGTGACTGAATTCAAAGAAGGGGACCATGTGTTAACAGTTTTCATAGGAGAATGCATGTCATGCAGGCTGTGCAAATCAGGAAAAACTAATATTTGTCAAGTTTTGGGATTGGAAAGAAAGGGTTTAATGCATAGTGATCAAAAGACAAGATTTACAGTAAAAGGGAAGCCTGTTTATCATTATTGCGGTGTTTCAAGTTTTAGTGAATACACAGTTGTTCATTCTGGATGTGCAGTGAAAGTCAGTCCTCATGTACCTCTTGAGAAAATATGCATTCTTAGCTGTGGGGTTTCTGCAGGTAAATATTTCCAAGTGTTTATTATTAACTATAAGAAATTGAAACATAAGGTTTAAGGAAACTCCAGTAATCTCTTCGTCCATACTGAGTGTCACTTTATGTTATGTCCCATTGTGTAACCCGTAGGACTACTTCTGAGTAATCTCTTCCTCAGAAACCTGCAGAACACACCATAGCGAATTTCCACCACCTTCTAGTACTAGTTAGTTATTTTCAAGGGCATAGTTCTCAAAGTTTTGTTTCTAAATGGACAGGATTGAAATTGTAATATCATTGATGAGTTCTCTGTTGTGTTGATTATGTGACAACTTTGCATTATAACAATAGGTCTAGGTGCAGCATGGAATGTTGCCGATGTGACAAAAGGATCCACAGTGGTTATATTTGGTCTTGGAACTGTTGGCCTTTCTGTAAGTCCAAGTACTCGGCCACTATATCTATCTTATATTCTCATGCAGACCGCAAAAGCACAAAGAGAATTCATATTTTCATATTATAAATTAAAATGTTAATTTTCTTTTTGCTCTTGAGGTCCTCATGATCTTAATAGATGAATGATATAATCTTTTCCAAATCATGACTCTCCTATTCAATAGGTTGCACAAGGGGCCAAACTAAGGGGTGCATCTAGAATAATTGGTGTTGACATCAATCCACAGAAGTGTGAAAATGGTAACATAATCAGTTCTCCAAATTACTCTGAATTTATTTTTAAACCTTAGAACGGCTCATAATCTCTTGATTTACTGTTTGTTGTCTTGTTCATTGCTACCACACAGCTAAATCTTTTGGGATTACAGAAGTTGTTGATCCGAGTTTGTACAAAGAACCTATCGTGCAGGTCGATTATTCGTCTCATAACAAACTTTCCAATTTCACAGCACAATTGCACATAAGCTATAAATAACAATGCAACCATTTGTGTGTTGAAAATTTCAGGTTATTAAGTGCATTACTGATGGTGGGGCAGATTTCTGTTTTGAATGTGCAGGTGACACTGATATGATAACCACTGCATTGCAATCATGCTGTGATGTAAAACTCTATATCCCTCAAGTCATGTTTTGTTATAGAAATAGTTTATATATAAGCACTTGTACGATAACTGTTTGTATGCGATAAGCGCTTAATTAAGTTGTTTATCCAAACAGGGTCTGACTTGAATTTCATTCTATCTTTCCTTGTTTACAACAGGGGTGGGGCTTGACTGTTACACTTGGTGTGCCAAAGGTGAAGCCTGAGATGTCAGCTCATTATGGACTATTCCTGACAGGAAGAACTTTAAAAGGATCTTTATTCGGAGGATGGAAACCTAAAACTGATCTTCCTTCATTAGTAGAGAAGTATGTCAACAAGGTAAAGTGACAATATCTAGAATATATCCTTTATCTAAGCATGATTTTATATATTTTTACTTTATGGTAACACATGACAATGTCTACTTGATCAAAAATCATTTCCCTTTTCTTGTTGTAACATACTTGTCTAACCAAAAACTTTTAAGCAAGACATTTTAGGCTGTTATTTTTGCTTACAGTTCTCTGCTACAATTTTTAATGTCATTTTGTTGTCTAAGTTATCATGGTCATTGGCCGACGATAAGACAATATCAATAGGGGTTGAGGCTAGAAGAAAGGACTAATCTCCCACAATGTGGCAAACCACCAATGTTCGAAACTGAATCTCTTTTGGGAGAAGTTTCCACATTGAATGTCCGACGATGTCTCACATAGATGTGACTTTAATACATTCATAAATTTGTCACCTACCCTTAATTTTTTAATATAAACATATGAAAGAGATTTTATTTTTGGATAAGGAAAAGTAATTCTAGTTACTTGCTTCATGTGCTTTTCTCCTTGTGGATTTTTATTCCTTAGGCAGTATTTATTAAGCATAAAAAAATATTTACTAATGATATGATAAATAAATATGCAGGAAATCCAGATTGATGACTACATAACACACAATTTGTCATTTGATGAAATTAACAAAGCTTTCAATCTCATGAAAGAAGGAAAGTGTCTTCGTTGTGTTATCCACATGCCAAGATAA
Protein sequence

>MS.gene069804.t1

MASSSSAPQVITCKAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWETHAIFPRIFGHEASGIVESVGLGVTEFKEGDHVLTVFIGECMSCRLCKSGKTNICQVLGLERKGLMHSDQKTRFTVKGKPVYHYCGVSSFSEYTVVHSGCAVKVSPHVPLEKICILSCGVSAGLGAAWNVADVTKGSTVVIFGLGTVGLSVAQGAKLRGASRIIGVDINPQKCENAKSFGITEVVDPSLYKEPIVQVIKCITDGGADFCFECAGDTDMITTALQSCCDGWGLTVTLGVPKVKPEMSAHYGLFLTGRTLKGSLFGGWKPKTDLPSLVEKYVNKEIQIDDYITHNLSFDEINKAFNLMKEGKCLRCVIHMPR