Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83309.t1 | XP_003619782.1 | 98.6 | 352 | 5 | 0 | 1 | 352 | 26 | 377 | 3.10E-202 | 714.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83309.t1 | Q8LEB2 | 78.1 | 352 | 77 | 0 | 1 | 352 | 30 | 381 | 6.2e-167 | 588.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83309.t1 | G7KPC5 | 98.6 | 352 | 5 | 0 | 1 | 352 | 26 | 377 | 2.2e-202 | 714.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049807 | MS.gene83309 | 0.818293 | 2.11E-52 | -1.69E-46 |
| MS.gene051885 | MS.gene83309 | 0.828202 | 1.03E-54 | -1.69E-46 |
| MS.gene054554 | MS.gene83309 | 0.814571 | 1.44E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene84205 | MS.gene83309 | PPI |
| MS.gene044229 | MS.gene83309 | PPI |
| MS.gene83309 | MS.gene02654 | PPI |
| MS.gene39827 | MS.gene83309 | PPI |
| MS.gene83309 | MS.gene038047 | PPI |
| MS.gene02655 | MS.gene83309 | PPI |
| MS.gene050322 | MS.gene83309 | PPI |
| MS.gene007227 | MS.gene83309 | PPI |
| MS.gene37836 | MS.gene83309 | PPI |
| MS.gene044228 | MS.gene83309 | PPI |
| MS.gene84204 | MS.gene83309 | PPI |
| MS.gene83309 | MS.gene77336 | PPI |
| MS.gene016853 | MS.gene83309 | PPI |
| MS.gene49741 | MS.gene83309 | PPI |
| MS.gene074415 | MS.gene83309 | PPI |
| MS.gene73688 | MS.gene83309 | PPI |
| MS.gene33522 | MS.gene83309 | PPI |
| MS.gene013678 | MS.gene83309 | PPI |
| MS.gene78435 | MS.gene83309 | PPI |
| MS.gene83309 | MS.gene02651 | PPI |
| MS.gene83309 | MS.gene013671 | PPI |
| MS.gene78434 | MS.gene83309 | PPI |
| MS.gene81954 | MS.gene83309 | PPI |
| MS.gene83309 | MS.gene70145 | PPI |
| MS.gene77335 | MS.gene83309 | PPI |
| MS.gene81957 | MS.gene83309 | PPI |
| MS.gene81956 | MS.gene83309 | PPI |
| MS.gene83309 | MS.gene02488 | PPI |
| MS.gene030545 | MS.gene83309 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83309.t1 | MTR_6g068930 | 98.580 | 352 | 5 | 0 | 1 | 352 | 26 | 377 | 0.0 | 715 |
| MS.gene83309.t1 | MTR_1g069430 | 51.977 | 354 | 166 | 2 | 1 | 350 | 24 | 377 | 1.43e-134 | 389 |
| MS.gene83309.t1 | MTR_7g099040 | 51.695 | 354 | 167 | 2 | 1 | 350 | 26 | 379 | 1.68e-133 | 386 |
| MS.gene83309.t1 | MTR_3g089940 | 50.847 | 354 | 170 | 2 | 1 | 350 | 25 | 378 | 1.84e-132 | 383 |
| MS.gene83309.t1 | MTR_3g089940 | 50.847 | 354 | 170 | 2 | 1 | 350 | 25 | 378 | 2.63e-132 | 383 |
| MS.gene83309.t1 | MTR_3g089977 | 50.565 | 354 | 171 | 2 | 1 | 350 | 25 | 378 | 8.27e-132 | 381 |
| MS.gene83309.t1 | MTR_3g089970 | 50.282 | 354 | 172 | 2 | 1 | 350 | 26 | 379 | 6.65e-131 | 379 |
| MS.gene83309.t1 | MTR_5g087710 | 50.000 | 358 | 173 | 4 | 1 | 352 | 34 | 391 | 2.68e-121 | 355 |
| MS.gene83309.t1 | MTR_3g089940 | 51.582 | 316 | 149 | 2 | 1 | 312 | 25 | 340 | 3.52e-116 | 341 |
| MS.gene83309.t1 | MTR_3g089940 | 51.582 | 316 | 149 | 2 | 1 | 312 | 25 | 340 | 3.84e-116 | 340 |
| MS.gene83309.t1 | MTR_7g068320 | 48.324 | 358 | 177 | 4 | 1 | 350 | 36 | 393 | 1.32e-115 | 341 |
| MS.gene83309.t1 | MTR_7g068330 | 48.179 | 357 | 178 | 3 | 1 | 350 | 29 | 385 | 6.69e-115 | 338 |
| MS.gene83309.t1 | MTR_3g079180 | 46.910 | 356 | 183 | 4 | 1 | 350 | 29 | 384 | 2.22e-113 | 335 |
| MS.gene83309.t1 | MTR_3g099460 | 50.838 | 358 | 168 | 3 | 1 | 350 | 25 | 382 | 4.18e-110 | 326 |
| MS.gene83309.t1 | MTR_3g099460 | 50.838 | 358 | 168 | 3 | 1 | 350 | 32 | 389 | 4.64e-110 | 327 |
| MS.gene83309.t1 | MTR_3g099460 | 51.724 | 319 | 151 | 2 | 35 | 350 | 8 | 326 | 5.63e-98 | 293 |
| MS.gene83309.t1 | MTR_5g045710 | 40.449 | 356 | 201 | 6 | 1 | 350 | 24 | 374 | 9.30e-88 | 269 |
| MS.gene83309.t1 | MTR_0001s0660 | 38.983 | 354 | 208 | 4 | 1 | 350 | 24 | 373 | 1.06e-86 | 269 |
| MS.gene83309.t1 | MTR_3g099460 | 53.208 | 265 | 116 | 3 | 1 | 257 | 25 | 289 | 8.52e-77 | 239 |
| MS.gene83309.t1 | MTR_3g099460 | 53.208 | 265 | 116 | 3 | 1 | 257 | 32 | 296 | 1.05e-76 | 239 |
| MS.gene83309.t1 | MTR_3g079170 | 45.126 | 277 | 128 | 5 | 70 | 341 | 24 | 281 | 2.21e-76 | 237 |
| MS.gene83309.t1 | MTR_5g045710 | 40.203 | 296 | 168 | 5 | 59 | 350 | 1 | 291 | 1.60e-69 | 219 |
| MS.gene83309.t1 | MTR_8g095220 | 29.006 | 362 | 240 | 11 | 1 | 350 | 68 | 424 | 1.53e-33 | 129 |
| MS.gene83309.t1 | MTR_8g095220 | 31.535 | 241 | 151 | 8 | 1 | 230 | 68 | 305 | 1.63e-24 | 102 |
| MS.gene83309.t1 | MTR_6g465010 | 28.169 | 355 | 190 | 13 | 11 | 341 | 23 | 336 | 2.52e-20 | 90.9 |
| MS.gene83309.t1 | MTR_6g466320 | 28.169 | 355 | 190 | 13 | 11 | 341 | 39 | 352 | 2.59e-20 | 91.3 |
| MS.gene83309.t1 | MTR_6g465010 | 28.169 | 355 | 190 | 13 | 11 | 341 | 39 | 352 | 2.59e-20 | 91.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83309.t1 | AT5G24760 | 78.125 | 352 | 77 | 0 | 1 | 352 | 30 | 381 | 0.0 | 592 |
| MS.gene83309.t1 | AT5G24760 | 78.125 | 352 | 77 | 0 | 1 | 352 | 1 | 352 | 0.0 | 590 |
| MS.gene83309.t1 | AT5G24760 | 78.125 | 352 | 77 | 0 | 1 | 352 | 1 | 352 | 0.0 | 590 |
| MS.gene83309.t1 | AT5G24760 | 77.528 | 267 | 60 | 0 | 86 | 352 | 1 | 267 | 1.29e-160 | 450 |
| MS.gene83309.t1 | AT1G77120 | 53.239 | 355 | 160 | 3 | 1 | 350 | 24 | 377 | 1.31e-137 | 396 |
| MS.gene83309.t1 | AT5G43940 | 52.528 | 356 | 165 | 2 | 1 | 352 | 24 | 379 | 2.98e-136 | 393 |
| MS.gene83309.t1 | AT5G43940 | 52.528 | 356 | 165 | 2 | 1 | 352 | 36 | 391 | 4.52e-136 | 393 |
| MS.gene83309.t1 | AT1G64710 | 48.179 | 357 | 178 | 3 | 1 | 350 | 1 | 357 | 5.26e-121 | 353 |
| MS.gene83309.t1 | AT1G64710 | 48.179 | 357 | 178 | 3 | 1 | 350 | 24 | 380 | 1.91e-120 | 353 |
| MS.gene83309.t1 | AT5G42250 | 48.739 | 357 | 176 | 5 | 1 | 350 | 33 | 389 | 2.25e-118 | 348 |
| MS.gene83309.t1 | AT1G32780 | 43.169 | 366 | 194 | 3 | 1 | 352 | 25 | 390 | 1.23e-114 | 338 |
| MS.gene83309.t1 | AT1G22440 | 48.485 | 363 | 172 | 4 | 1 | 352 | 28 | 386 | 3.26e-113 | 334 |
| MS.gene83309.t1 | AT4G22110 | 49.448 | 362 | 170 | 4 | 1 | 352 | 31 | 389 | 1.13e-112 | 333 |
| MS.gene83309.t1 | AT4G22110 | 49.448 | 362 | 170 | 4 | 1 | 352 | 31 | 389 | 1.13e-112 | 333 |
| MS.gene83309.t1 | AT1G22430 | 48.352 | 364 | 171 | 5 | 1 | 352 | 30 | 388 | 2.21e-112 | 332 |
| MS.gene83309.t1 | AT1G22430 | 48.352 | 364 | 171 | 5 | 1 | 352 | 30 | 388 | 2.21e-112 | 332 |
| MS.gene83309.t1 | AT1G64710 | 47.059 | 306 | 159 | 2 | 48 | 350 | 6 | 311 | 3.21e-98 | 293 |
| MS.gene83309.t1 | AT1G22430 | 46.207 | 290 | 132 | 6 | 1 | 278 | 30 | 307 | 3.74e-80 | 248 |
| MS.gene83309.t1 | AT1G22430 | 49.569 | 232 | 101 | 4 | 1 | 221 | 30 | 256 | 2.37e-70 | 221 |
| MS.gene83309.t1 | AT1G22430 | 49.569 | 232 | 101 | 4 | 1 | 221 | 30 | 256 | 2.37e-70 | 221 |
| MS.gene83309.t1 | AT4G22110 | 50.870 | 230 | 101 | 3 | 1 | 221 | 31 | 257 | 7.10e-70 | 220 |
| MS.gene83309.t1 | AT5G63620 | 28.371 | 356 | 237 | 12 | 1 | 344 | 70 | 419 | 1.11e-30 | 121 |
| MS.gene83309.t1 | AT5G63620 | 29.050 | 358 | 232 | 13 | 1 | 344 | 70 | 419 | 1.45e-30 | 120 |
| MS.gene83309.t1 | AT5G63620 | 30.992 | 242 | 152 | 9 | 1 | 231 | 70 | 307 | 3.87e-23 | 98.6 |
| MS.gene83309.t1 | AT5G51970 | 25.143 | 350 | 207 | 12 | 11 | 341 | 41 | 354 | 3.89e-17 | 82.0 |
| MS.gene83309.t1 | AT5G51970 | 25.143 | 350 | 207 | 12 | 11 | 341 | 41 | 354 | 3.89e-17 | 82.0 |
Find 73 sgRNAs with CRISPR-Local
Find 245 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGACAAGATTTACAGTAAA+AGG | 0.163487 | 6.1:-63032839 | MS.gene83309:CDS |
| AACTAATATTTGTCAAGTTT+TGG | 0.171217 | 6.1:-63032897 | MS.gene83309:CDS |
| GCCATATTTCCTCGCATATT+TGG | 0.189832 | 6.1:-63033702 | MS.gene83309:CDS |
| ACCATTGGAGATTAGGATTA+AGG | 0.205928 | 6.1:-63034590 | MS.gene83309:CDS |
| ACTTTAAAAGGATCTTTATT+TGG | 0.216447 | 6.1:-63031062 | MS.gene83309:CDS |
| GCCAAATATGCGAGGAAATA+TGG | 0.248039 | 6.1:+63033701 | None:intergenic |
| CTGACAGGAAGAACTTTAAA+AGG | 0.257915 | 6.1:-63031074 | MS.gene83309:CDS |
| TACCACACAGCTAAATCTTT+TGG | 0.263883 | 6.1:-63031631 | MS.gene83309:intron |
| GGATCAACAGTAGTTATATT+TGG | 0.302821 | 6.1:-63032033 | MS.gene83309:CDS |
| AATCCTCAGAAGTGTGAAAA+TGG | 0.318657 | 6.1:-63031750 | MS.gene83309:intron |
| AGGGGTGCATCTAGAATAAT+TGG | 0.320329 | 6.1:-63031783 | MS.gene83309:CDS |
| GAATACACAGTTGTTCATTC+TGG | 0.335258 | 6.1:-63032776 | MS.gene83309:CDS |
| CTCCTCAACCATTGGAGATT+AGG | 0.340698 | 6.1:-63034597 | MS.gene83309:CDS |
| TCTAGATGCACCCCTTAGTT+TGG | 0.343778 | 6.1:+63031791 | None:intergenic |
| CCTGAGATGTCAGCTCATTA+TGG | 0.348801 | 6.1:-63031104 | MS.gene83309:CDS |
| GACATCTCAGGCTTCACCTT+TGG | 0.385095 | 6.1:+63031116 | None:intergenic |
| TCATGCAGGCTGTGCAAATC+AGG | 0.386476 | 6.1:-63032923 | MS.gene83309:CDS |
| TCGTAGTGATCTTTCTGCTT+GGG | 0.388667 | 6.1:-63034548 | MS.gene83309:CDS |
| ATATTTGGCCACGAAGCATC+TGG | 0.392686 | 6.1:-63033687 | MS.gene83309:CDS |
| GGCATTGGTGATGGAGGAAG+TGG | 0.403806 | 6.1:-63034629 | None:intergenic |
| TTGCACAAGGGGCCAAACTA+AGG | 0.405871 | 6.1:-63031803 | MS.gene83309:CDS |
| ACAGTAGTTATATTTGGTCT+TGG | 0.409362 | 6.1:-63032027 | MS.gene83309:CDS |
| CTTAGCTGTGGTGTTTCTGC+AGG | 0.413316 | 6.1:-63032704 | MS.gene83309:intron |
| GTGTTATGTAGTCATCAATC+TGG | 0.423973 | 6.1:+63030397 | None:intergenic |
| ACACCGCAATAATGATAAAC+AGG | 0.427206 | 6.1:+63032812 | None:intergenic |
| ATATTTGGTCTTGGAACTGT+TGG | 0.428969 | 6.1:-63032018 | MS.gene83309:CDS |
| TTAAAAGGATCTTTATTTGG+AGG | 0.436137 | 6.1:-63031059 | MS.gene83309:CDS |
| CCATAATGAGCTGACATCTC+AGG | 0.446817 | 6.1:+63031104 | None:intergenic |
| GTCGTAGTGATCTTTCTGCT+TGG | 0.448380 | 6.1:-63034549 | MS.gene83309:CDS |
| AAGGATCTTTATTTGGAGGA+TGG | 0.448842 | 6.1:-63031055 | MS.gene83309:CDS |
| ACAAGCCAAAGGAATTATCT+TGG | 0.468138 | 6.1:+63030294 | None:intergenic |
| AGACAAGATTTACAGTAAAA+GGG | 0.484730 | 6.1:-63032838 | MS.gene83309:CDS |
| GAATAATCGACCTGCGCGAT+AGG | 0.492188 | 6.1:+63031571 | None:intergenic |
| GCAGGATTGTTGAGAGCGTA+GGG | 0.505817 | 6.1:-63033009 | MS.gene83309:intron |
| TGCAGGATTGTTGAGAGCGT+AGG | 0.508503 | 6.1:-63033010 | MS.gene83309:intron |
| ATTGTTGAGAGCGTAGGGCT+AGG | 0.509736 | 6.1:-63033004 | MS.gene83309:CDS |
| ATCCTAATCTCCAATGGTTG+AGG | 0.520022 | 6.1:+63034595 | None:intergenic |
| TAGGAGAATGCATGTCATGC+AGG | 0.520032 | 6.1:-63032937 | MS.gene83309:CDS |
| AGTCAGTCCTCCTCAACCAT+TGG | 0.520494 | 6.1:-63034605 | MS.gene83309:CDS |
| TGCACAAGGGGCCAAACTAA+GGG | 0.521604 | 6.1:-63031802 | MS.gene83309:CDS |
| CTTGTTCAATAGGTTGCACA+AGG | 0.525173 | 6.1:-63031816 | MS.gene83309:intron |
| AATGTTGCCGATGTATCAAA+AGG | 0.534216 | 6.1:-63032054 | MS.gene83309:CDS |
| ACATACTTCTCTACTAATGA+AGG | 0.534955 | 6.1:+63031014 | None:intergenic |
| TTAAGAGCATTACTGATGGT+GGG | 0.536930 | 6.1:-63031397 | MS.gene83309:CDS |
| TAGATTACCCAGATGCTTCG+TGG | 0.537317 | 6.1:+63033679 | None:intergenic |
| GGAGTGACTGAATTCAAAGA+AGG | 0.538722 | 6.1:-63032983 | MS.gene83309:CDS |
| CATTATGGACTATTCCTGAC+AGG | 0.543387 | 6.1:-63031089 | MS.gene83309:CDS |
| ATTAAGAGCATTACTGATGG+TGG | 0.544186 | 6.1:-63031398 | MS.gene83309:CDS |
| GCTTTCAATCTCATGAAAGA+AGG | 0.550205 | 6.1:-63030345 | MS.gene83309:CDS |
| TAAGAGCATTACTGATGGTG+GGG | 0.574062 | 6.1:-63031396 | MS.gene83309:CDS |
| GAGTGACTGAATTCAAAGAA+GGG | 0.576891 | 6.1:-63032982 | MS.gene83309:CDS |
| AAGCCTGTTTATCATTATTG+CGG | 0.594521 | 6.1:-63032815 | MS.gene83309:CDS |
| TGTTCAATAGGTTGCACAAG+GGG | 0.596665 | 6.1:-63031814 | MS.gene83309:intron |
| ACCTTAATCCTAATCTCCAA+TGG | 0.599263 | 6.1:+63034589 | None:intergenic |
| CTAATCTCCAATGGTTGAGG+AGG | 0.600166 | 6.1:+63034598 | None:intergenic |
| CATTAGGTCTAGGTGCAGCA+TGG | 0.601556 | 6.1:-63032077 | MS.gene83309:intron |
| CTATGAAAACTGTTAACACA+TGG | 0.605315 | 6.1:+63032957 | None:intergenic |
| TATTTGGCCACGAAGCATCT+GGG | 0.608176 | 6.1:-63033686 | MS.gene83309:intron |
| ATAGGTTCTTTGTACAAACT+CGG | 0.612591 | 6.1:+63031589 | None:intergenic |
| TGGGGCTTGACTGTAACACT+TGG | 0.613463 | 6.1:-63031143 | MS.gene83309:CDS |
| AAAGGAATTATCTTGGCATG+TGG | 0.620375 | 6.1:+63030301 | None:intergenic |
| GTTATTAAGAGCATTACTGA+TGG | 0.622748 | 6.1:-63031401 | MS.gene83309:CDS |
| GTACAAAGAACCTATCGCGC+AGG | 0.623717 | 6.1:-63031581 | MS.gene83309:intron |
| ATCACTACGACAAAGAGAGG+TGG | 0.635585 | 6.1:+63034561 | None:intergenic |
| AAGATCACTACGACAAAGAG+AGG | 0.642771 | 6.1:+63034558 | None:intergenic |
| GCACAAGGGGCCAAACTAAG+GGG | 0.646651 | 6.1:-63031801 | MS.gene83309:CDS |
| TGTAACACTTGGTGTGCCAA+AGG | 0.647519 | 6.1:-63031132 | MS.gene83309:CDS |
| ACAGCATGATTGCAATGCAG+TGG | 0.658129 | 6.1:+63031331 | None:intergenic |
| AGTAGAGAAGTATGTCAACA+AGG | 0.658436 | 6.1:-63031006 | MS.gene83309:intron |
| AGTGACTGAATTCAAAGAAG+GGG | 0.664041 | 6.1:-63032981 | MS.gene83309:CDS |
| TTGTTCAATAGGTTGCACAA+GGG | 0.670738 | 6.1:-63031815 | MS.gene83309:intron |
| AAAATATGCATTCTTAGCTG+TGG | 0.671818 | 6.1:-63032716 | MS.gene83309:CDS |
| GCTTCGTGGCCAAATATGCG+AGG | 0.691472 | 6.1:+63033693 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGTTTATATTAAAAAGTTA+AGG | + | chr6.1:63034359-63034378 | None:intergenic | 10.0% |
| !! | GATATTGAAAATAATAAAAT+CGG | + | chr6.1:63030685-63030704 | None:intergenic | 10.0% |
| !! | TGTTTATATTAAAAAGTTAA+GGG | + | chr6.1:63034358-63034377 | None:intergenic | 10.0% |
| !!! | TTTATTTTTAAACCTTAAAA+CGG | - | chr6.1:63033231-63033250 | MS.gene83309:intron | 10.0% |
| !! | AAAATAAATTCAGAGTAATT+CGG | + | chr6.1:63033219-63033238 | None:intergenic | 15.0% |
| !! | AATTATCGTTATTAACTATT+AGG | - | chr6.1:63032411-63032430 | MS.gene83309:intron | 15.0% |
| !! | ATACTGAATATAAAACTAAA+TGG | - | chr6.1:63031168-63031187 | MS.gene83309:intron | 15.0% |
| !! | ATAGTTTAATAATAAACACT+TGG | + | chr6.1:63032265-63032284 | None:intergenic | 15.0% |
| !! | ATCTATAATGATAAAATAAG+AGG | + | chr6.1:63030418-63030437 | None:intergenic | 15.0% |
| !! | ATTATTTGTAAAGGTAAAAT+TGG | + | chr6.1:63033396-63033415 | None:intergenic | 15.0% |
| !! | GTATATAAGATTATTTGTAA+AGG | + | chr6.1:63033405-63033424 | None:intergenic | 15.0% |
| !! | TTTAACCAAATTATTTCAAA+AGG | - | chr6.1:63031852-63031871 | MS.gene83309:intron | 15.0% |
| !! | TTTCTATTATACAATTGTTA+GGG | + | chr6.1:63032497-63032516 | None:intergenic | 15.0% |
| !!! | AAAGTGATACTTATTATTTT+AGG | - | chr6.1:63032742-63032761 | MS.gene83309:CDS | 15.0% |
| !!! | GTTTAATTTTGATACATTAT+CGG | + | chr6.1:63030626-63030645 | None:intergenic | 15.0% |
| !!! | TATGAAAGAGATTTTATTTT+TGG | - | chr6.1:63034378-63034397 | MS.gene83309:intron | 15.0% |
| !!! | TTATTTTTAAACCTTAAAAC+GGG | - | chr6.1:63033232-63033251 | MS.gene83309:intron | 15.0% |
| !!! | TTTTCTATTATACAATTGTT+AGG | + | chr6.1:63032498-63032517 | None:intergenic | 15.0% |
| !! | AAAAATATTTACATTGAACG+CGG | + | chr6.1:63030501-63030520 | None:intergenic | 20.0% |
| !! | AAATTGAAAGTTAAGGTTTA+AGG | - | chr6.1:63032288-63032307 | MS.gene83309:intron | 20.0% |
| !! | AAGAAATCCTTGATATATAT+TGG | - | chr6.1:63030464-63030483 | MS.gene83309:intron | 20.0% |
| !! | AAGAATAAATATTCATTAGC+AGG | + | chr6.1:63031122-63031141 | None:intergenic | 20.0% |
| !! | AATTATATTGTGAACCTTAA+TGG | + | chr6.1:63031806-63031825 | None:intergenic | 20.0% |
| !! | AGAAAGTTATGATTTAGAAA+AGG | + | chr6.1:63033093-63033112 | None:intergenic | 20.0% |
| !! | ATAAAATCATGCTTAGATAA+AGG | + | chr6.1:63033972-63033991 | None:intergenic | 20.0% |
| !! | ATATTAAAAAGTTAAGGGTA+GGG | + | chr6.1:63034353-63034372 | None:intergenic | 20.0% |
| !! | ATCTATAGAAAACAACTAAT+TGG | + | chr6.1:63030716-63030735 | None:intergenic | 20.0% |
| !! | CAAATTGTATTGAAATACTA+CGG | + | chr6.1:63032464-63032483 | None:intergenic | 20.0% |
| !! | CTATAAGAAATTGAAAGTTA+AGG | - | chr6.1:63032281-63032300 | MS.gene83309:intron | 20.0% |
| !! | GATATGATAAATAAATATGC+AGG | - | chr6.1:63034503-63034522 | MS.gene83309:intron | 20.0% |
| !! | TATATTAAAAAGTTAAGGGT+AGG | + | chr6.1:63034354-63034373 | None:intergenic | 20.0% |
| !! | TCGATAATAATTTGAGAAAA+TGG | + | chr6.1:63030946-63030965 | None:intergenic | 20.0% |
| !! | TCTTCAAATAAAACAACTAA+AGG | + | chr6.1:63031315-63031334 | None:intergenic | 20.0% |
| !! | TTATGATTTAGAAAAGGTTA+TGG | + | chr6.1:63033087-63033106 | None:intergenic | 20.0% |
| !!! | AACTAATATTTGTCAAGTTT+TGG | - | chr6.1:63032030-63032049 | MS.gene83309:CDS | 20.0% |
| !!! | ACTAATATTTGTCAAGTTTT+GGG | - | chr6.1:63032031-63032050 | MS.gene83309:CDS | 20.0% |
| !!! | ACTTTAAAAGGATCTTTATT+TGG | - | chr6.1:63033865-63033884 | MS.gene83309:intron | 20.0% |
| !!! | AGAGATTTTATTTTTGGATA+AGG | - | chr6.1:63034384-63034403 | MS.gene83309:intron | 20.0% |
| !!! | ATTTTGTTTGACATGATTAA+TGG | - | chr6.1:63030832-63030851 | MS.gene83309:intron | 20.0% |
| !!! | TTACACCTTTTGAAATAATT+TGG | + | chr6.1:63031860-63031879 | None:intergenic | 20.0% |
| !!! | TTGTTTTCTATAGATATTGT+CGG | - | chr6.1:63030721-63030740 | MS.gene83309:intron | 20.0% |
| !!! | TTTCTAAAGTCAAACATTAA+CGG | - | chr6.1:63030584-63030603 | MS.gene83309:intron | 20.0% |
| ! | AAGACAAGATTTACAGTAAA+AGG | - | chr6.1:63032088-63032107 | MS.gene83309:intron | 25.0% |
| ! | AAGTATGTTACAACAAGAAA+AGG | + | chr6.1:63034051-63034070 | None:intergenic | 25.0% |
| ! | AATAAAAGCTAATGAAAGCT+TGG | - | chr6.1:63031088-63031107 | MS.gene83309:CDS | 25.0% |
| ! | AATAATAAACACTTGGAAGT+TGG | + | chr6.1:63032258-63032277 | None:intergenic | 25.0% |
| ! | ACGATAAGACAATATCAATA+GGG | - | chr6.1:63034182-63034201 | MS.gene83309:intron | 25.0% |
| ! | ACTATATTCAACATCTACTA+TGG | + | chr6.1:63031887-63031906 | None:intergenic | 25.0% |
| ! | AGAAGATAAGATAGATATAG+TGG | + | chr6.1:63032960-63032979 | None:intergenic | 25.0% |
| ! | AGACAAGATTTACAGTAAAA+GGG | - | chr6.1:63032089-63032108 | MS.gene83309:intron | 25.0% |
| ! | AGATGTTGAATATAGTGTAA+TGG | - | chr6.1:63031891-63031910 | MS.gene83309:intron | 25.0% |
| ! | AGTATGTTACAACAAGAAAA+GGG | + | chr6.1:63034050-63034069 | None:intergenic | 25.0% |
| ! | ATGGAATTACATCTAACATA+AGG | - | chr6.1:63031187-63031206 | MS.gene83309:intron | 25.0% |
| ! | ATGTCAAACAAAATGTTGAT+TGG | + | chr6.1:63030826-63030845 | None:intergenic | 25.0% |
| ! | ATTTGTGTGTTGAAAATTTC+AGG | - | chr6.1:63033504-63033523 | MS.gene83309:intron | 25.0% |
| ! | TAACCATTGTCATTGTAATT+TGG | - | chr6.1:63032437-63032456 | MS.gene83309:intron | 25.0% |
| ! | TATAACAAAACATGACTTGA+GGG | + | chr6.1:63033639-63033658 | None:intergenic | 25.0% |
| ! | TATTAAAAAGTTAAGGGTAG+GGG | + | chr6.1:63034352-63034371 | None:intergenic | 25.0% |
| ! | TATTGATATTGTCTTATCGT+CGG | + | chr6.1:63034182-63034201 | None:intergenic | 25.0% |
| ! | TCATAACTTTCTTGTTCAAT+AGG | - | chr6.1:63033101-63033120 | MS.gene83309:intron | 25.0% |
| ! | TCTTAAGAACTGTAATATGT+AGG | + | chr6.1:63031044-63031063 | None:intergenic | 25.0% |
| ! | TGATCTACCAATATATATCA+AGG | + | chr6.1:63030474-63030493 | None:intergenic | 25.0% |
| !! | AATGTCTTGCTTAAAAGTAT+TGG | + | chr6.1:63034080-63034099 | None:intergenic | 25.0% |
| !! | ACTTTTAAGCAAGACATTTT+AGG | - | chr6.1:63034082-63034101 | MS.gene83309:intron | 25.0% |
| !! | ATTAAGTTGTTTATCCAAAC+AGG | - | chr6.1:63033716-63033735 | MS.gene83309:intron | 25.0% |
| !! | GATGATTCTCATTTTAAACT+CGG | + | chr6.1:63031541-63031560 | None:intergenic | 25.0% |
| !! | TCATTTTAAACTCGGTAAAT+CGG | + | chr6.1:63031533-63031552 | None:intergenic | 25.0% |
| !! | TGAAATTTTCAACACACAAA+TGG | + | chr6.1:63033505-63033524 | None:intergenic | 25.0% |
| !! | TGTTTTCTATAGATATTGTC+GGG | - | chr6.1:63030722-63030741 | MS.gene83309:intron | 25.0% |
| !! | TTAAAAGGATCTTTATTTGG+AGG | - | chr6.1:63033868-63033887 | MS.gene83309:intron | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+GGG | - | chr6.1:63033717-63033736 | MS.gene83309:intron | 25.0% |
| !!! | ATCTTTCCTTTTTTACAACA+GGG | - | chr6.1:63033760-63033779 | MS.gene83309:intron | 25.0% |
| !!! | TATCTTTCCTTTTTTACAAC+AGG | - | chr6.1:63033759-63033778 | MS.gene83309:intron | 25.0% |
| !!! | TTTTGTTGTCTAAGTTATCA+TGG | - | chr6.1:63034149-63034168 | MS.gene83309:intron | 25.0% |
| AAAATATGCATTCTTAGCTG+TGG | - | chr6.1:63032211-63032230 | MS.gene83309:intron | 30.0% | |
| AACAGTAACTCAAGAGATTA+TGG | + | chr6.1:63033258-63033277 | None:intergenic | 30.0% | |
| AAGCCTGTTTATCATTATTG+CGG | - | chr6.1:63032112-63032131 | MS.gene83309:intron | 30.0% | |
| ACAGTAGTTATATTTGGTCT+TGG | - | chr6.1:63032900-63032919 | MS.gene83309:CDS | 30.0% | |
| ACATACTTCTCTACTAATGA+AGG | + | chr6.1:63033916-63033935 | None:intergenic | 30.0% | |
| ATAGGTTCTTTGTACAAACT+CGG | + | chr6.1:63033341-63033360 | None:intergenic | 30.0% | |
| CGATAAGACAATATCAATAG+GGG | - | chr6.1:63034183-63034202 | MS.gene83309:intron | 30.0% | |
| CTAAGGAATAAAAATCCACA+AGG | + | chr6.1:63034447-63034466 | None:intergenic | 30.0% | |
| CTATAACAAAACATGACTTG+AGG | + | chr6.1:63033640-63033659 | None:intergenic | 30.0% | |
| CTATGAAAACTGTTAACACA+TGG | + | chr6.1:63031973-63031992 | None:intergenic | 30.0% | |
| GACGATAAGACAATATCAAT+AGG | - | chr6.1:63034181-63034200 | MS.gene83309:intron | 30.0% | |
| GGATCAACAGTAGTTATATT+TGG | - | chr6.1:63032894-63032913 | MS.gene83309:CDS | 30.0% | |
| TACACTTAATGTTCTACTGT+TGG | - | chr6.1:63031269-63031288 | MS.gene83309:intron | 30.0% | |
| TATAATGAACTTGAGAGTGA+TGG | - | chr6.1:63032658-63032677 | MS.gene83309:intron | 30.0% | |
| TATCCAATTACATCTCACAA+AGG | + | chr6.1:63030767-63030786 | None:intergenic | 30.0% | |
| TGATGTATATGCATGAGAAT+GGG | - | chr6.1:63031691-63031710 | MS.gene83309:intron | 30.0% | |
| TGCTTAATAAATACTGCCTA+AGG | + | chr6.1:63034464-63034483 | None:intergenic | 30.0% | |
| TTAATGGTACAGCAAAATAC+AGG | + | chr6.1:63031790-63031809 | None:intergenic | 30.0% | |
| TTCGTGTGAGATAACTTAAA+AGG | + | chr6.1:63032349-63032368 | None:intergenic | 30.0% | |
| ! | AATGAAGGAAGATCAGTTTT+AGG | + | chr6.1:63033901-63033920 | None:intergenic | 30.0% |
| ! | AGAATGCATATTTTCTCAAG+AGG | + | chr6.1:63032205-63032224 | None:intergenic | 30.0% |
| ! | CATGTGTTAACAGTTTTCAT+AGG | - | chr6.1:63031971-63031990 | MS.gene83309:intron | 30.0% |
| ! | CTTGTGGATTTTTATTCCTT+AGG | - | chr6.1:63034445-63034464 | MS.gene83309:intron | 30.0% |
| ! | TGTTGATCCTTTTGATACAT+CGG | + | chr6.1:63032883-63032902 | None:intergenic | 30.0% |
| ! | TTCGAAACTGAATCTCTTTT+GGG | - | chr6.1:63034257-63034276 | MS.gene83309:intron | 30.0% |
| !! | ATATAGTGTAATGGTTTTGC+AGG | - | chr6.1:63031900-63031919 | MS.gene83309:intron | 30.0% |
| !! | CAGTTTTAATCTGGAAGTAT+TGG | + | chr6.1:63030872-63030891 | None:intergenic | 30.0% |
| !! | CATAAGGTGTTTTTATATGC+AGG | - | chr6.1:63031203-63031222 | MS.gene83309:intron | 30.0% |
| !! | GTTATTAAGAGCATTACTGA+TGG | - | chr6.1:63033526-63033545 | MS.gene83309:intron | 30.0% |
| !! | TGTATTTTGCTGTACCATTA+AGG | - | chr6.1:63031789-63031808 | MS.gene83309:CDS | 30.0% |
| !!! | TATTTGTCAAGTTTTGGGAT+TGG | - | chr6.1:63032036-63032055 | MS.gene83309:CDS | 30.0% |
| !!! | TCTTTCCTTTTTTACAACAG+GGG | - | chr6.1:63033761-63033780 | MS.gene83309:intron | 30.0% |
| !!! | TTTTAGGACATCTTTCTCAA+TGG | - | chr6.1:63032758-63032777 | MS.gene83309:CDS | 30.0% |
| !!! | TTTTTCTGTTTCTTTAGAGC+TGG | - | chr6.1:63032599-63032618 | MS.gene83309:intron | 30.0% |
| AATGTTGCCGATGTATCAAA+AGG | - | chr6.1:63032873-63032892 | MS.gene83309:CDS | 35.0% | |
| AATTTACAGCTATGGCTAGT+TGG | + | chr6.1:63031727-63031746 | None:intergenic | 35.0% | |
| ACACCGCAATAATGATAAAC+AGG | + | chr6.1:63032118-63032137 | None:intergenic | 35.0% | |
| ACATTGATCAACTATGGGAA+TGG | - | chr6.1:63031431-63031450 | MS.gene83309:intron | 35.0% | |
| ACCATTGGAGATTAGGATTA+AGG | - | chr6.1:63030337-63030356 | MS.gene83309:CDS | 35.0% | |
| ACCTTAATCCTAATCTCCAA+TGG | + | chr6.1:63030341-63030360 | None:intergenic | 35.0% | |
| ACTGAAGTAACAATACGTGT+CGG | + | chr6.1:63030919-63030938 | None:intergenic | 35.0% | |
| AGAGATTCAGTTTCGAACAT+TGG | + | chr6.1:63034254-63034273 | None:intergenic | 35.0% | |
| AGAGTGACATTGATCAACTA+TGG | - | chr6.1:63031425-63031444 | MS.gene83309:intron | 35.0% | |
| AGATATAGTGGTTGAGTACT+TGG | + | chr6.1:63032948-63032967 | None:intergenic | 35.0% | |
| AGCTAAACTCTGTGATCAAT+CGG | - | chr6.1:63032558-63032577 | MS.gene83309:intron | 35.0% | |
| AGTCATGTCTATGTGAATTG+CGG | + | chr6.1:63031833-63031852 | None:intergenic | 35.0% | |
| AGTGACTGAATTCAAAGAAG+GGG | - | chr6.1:63031946-63031965 | MS.gene83309:intron | 35.0% | |
| ATCGGAGACAAGAAGTAAAA+AGG | + | chr6.1:63030667-63030686 | None:intergenic | 35.0% | |
| ATCTATCTTATCTTCTGACG+AGG | - | chr6.1:63032964-63032983 | MS.gene83309:CDS | 35.0% | |
| CAATCCAGGTCCATAAAAAA+TGG | - | chr6.1:63031623-63031642 | MS.gene83309:CDS | 35.0% | |
| CACTACAGTAGATGAATCAT+TGG | - | chr6.1:63031478-63031497 | MS.gene83309:intron | 35.0% | |
| CAGGTCCATAAAAAATGGTA+GGG | - | chr6.1:63031628-63031647 | MS.gene83309:intron | 35.0% | |
| CTCATTGCATTCCTAACATT+AGG | - | chr6.1:63032834-63032853 | MS.gene83309:CDS | 35.0% | |
| CTGACAGGAAGAACTTTAAA+AGG | - | chr6.1:63033853-63033872 | MS.gene83309:intron | 35.0% | |
| CTTAAAAGGCCACTCAATAT+AGG | + | chr6.1:63032335-63032354 | None:intergenic | 35.0% | |
| GAATACACAGTTGTTCATTC+TGG | - | chr6.1:63032151-63032170 | MS.gene83309:intron | 35.0% | |
| GAGTGACATTGATCAACTAT+GGG | - | chr6.1:63031426-63031445 | MS.gene83309:intron | 35.0% | |
| GAGTGACTGAATTCAAAGAA+GGG | - | chr6.1:63031945-63031964 | MS.gene83309:intron | 35.0% | |
| GCTTTCAATCTCATGAAAGA+AGG | - | chr6.1:63034582-63034601 | MS.gene83309:CDS | 35.0% | |
| GGTCCAAATTACAATGACAA+TGG | + | chr6.1:63032443-63032462 | None:intergenic | 35.0% | |
| GTCTAAGTTATCATGGTCAT+TGG | - | chr6.1:63034156-63034175 | MS.gene83309:intron | 35.0% | |
| GTGATGTATATGCATGAGAA+TGG | - | chr6.1:63031690-63031709 | MS.gene83309:intron | 35.0% | |
| GTGTTATGTAGTCATCAATC+TGG | + | chr6.1:63034533-63034552 | None:intergenic | 35.0% | |
| TCGGAGACAAGAAGTAAAAA+GGG | + | chr6.1:63030666-63030685 | None:intergenic | 35.0% | |
| TCGGTAAATCGGATTTCAAA+CGG | + | chr6.1:63031522-63031541 | None:intergenic | 35.0% | |
| TTGTTCAATAGGTTGCACAA+GGG | - | chr6.1:63033112-63033131 | MS.gene83309:intron | 35.0% | |
| ! | AAGGATCTTTATTTGGAGGA+TGG | - | chr6.1:63033872-63033891 | MS.gene83309:intron | 35.0% |
| ! | AATCCTCAGAAGTGTGAAAA+TGG | - | chr6.1:63033177-63033196 | MS.gene83309:intron | 35.0% |
| ! | ACCACACAGCTAAATCTTTT+GGG | - | chr6.1:63033297-63033316 | MS.gene83309:intron | 35.0% |
| ! | AGTAGAGAAGTATGTCAACA+AGG | - | chr6.1:63033921-63033940 | MS.gene83309:intron | 35.0% |
| ! | GTTCGAAACTGAATCTCTTT+TGG | - | chr6.1:63034256-63034275 | MS.gene83309:intron | 35.0% |
| ! | TACCACACAGCTAAATCTTT+TGG | - | chr6.1:63033296-63033315 | MS.gene83309:intron | 35.0% |
| ! | TTACCATTTTCACACTTCTG+AGG | + | chr6.1:63033183-63033202 | None:intergenic | 35.0% |
| !! | ATATTTGGTCTTGGAACTGT+TGG | - | chr6.1:63032909-63032928 | MS.gene83309:CDS | 35.0% |
| !! | ATTAAGAGCATTACTGATGG+TGG | - | chr6.1:63033529-63033548 | MS.gene83309:intron | 35.0% |
| !! | ATTTTCTCAAGAGGTACATG+AGG | + | chr6.1:63032196-63032215 | None:intergenic | 35.0% |
| !! | GATTTCTGTTTTGAATGTGC+AGG | - | chr6.1:63033556-63033575 | MS.gene83309:intron | 35.0% |
| !! | TTAAGAGCATTACTGATGGT+GGG | - | chr6.1:63033530-63033549 | MS.gene83309:intron | 35.0% |
| !!! | AGTTTTGGGATTGGAAAGAA+AGG | - | chr6.1:63032045-63032064 | MS.gene83309:CDS | 35.0% |
| !!! | CTTTTAAAGTTCTTCCTGTC+AGG | + | chr6.1:63033855-63033874 | None:intergenic | 35.0% |
| !!! | GTTTTGGGATTGGAAAGAAA+GGG | - | chr6.1:63032046-63032065 | MS.gene83309:CDS | 35.0% |
| !!! | TGTGTGATATTTTGACCGTA+AGG | + | chr6.1:63031460-63031479 | None:intergenic | 35.0% |
| AAGATCACTACGACAAAGAG+AGG | + | chr6.1:63030372-63030391 | None:intergenic | 40.0% | |
| AAGGTTATGGCATTCATCTG+TGG | + | chr6.1:63033074-63033093 | None:intergenic | 40.0% | |
| AATTCAAGTCAGACCCTGTT+TGG | + | chr6.1:63033733-63033752 | None:intergenic | 40.0% | |
| ACGCATTTACTGCAGATAGT+AGG | + | chr6.1:63031586-63031605 | None:intergenic | 40.0% | |
| AGACAAGAAGTAAAAAGGGC+AGG | + | chr6.1:63030662-63030681 | None:intergenic | 40.0% | |
| ATCCTAATCTCCAATGGTTG+AGG | + | chr6.1:63030335-63030354 | None:intergenic | 40.0% | |
| ATGCGTGATACTATGACTGA+AGG | - | chr6.1:63031600-63031619 | MS.gene83309:CDS | 40.0% | |
| ATTTACTGCAGATAGTAGGC+TGG | + | chr6.1:63031582-63031601 | None:intergenic | 40.0% | |
| CCAGGTCCATAAAAAATGGT+AGG | - | chr6.1:63031627-63031646 | MS.gene83309:intron | 40.0% | |
| CGGTAAATCGGATTTCAAAC+GGG | + | chr6.1:63031521-63031540 | None:intergenic | 40.0% | |
| CTAGCCATAGCTGTAAATTG+CGG | - | chr6.1:63031728-63031747 | MS.gene83309:intron | 40.0% | |
| CTGAAGTAACAATACGTGTC+GGG | + | chr6.1:63030918-63030937 | None:intergenic | 40.0% | |
| CTTGTTCAATAGGTTGCACA+AGG | - | chr6.1:63033111-63033130 | MS.gene83309:intron | 40.0% | |
| GACAATATCAATAGGGGTTG+AGG | - | chr6.1:63034189-63034208 | MS.gene83309:intron | 40.0% | |
| GAGTACTTGGACTTACAGAA+AGG | + | chr6.1:63032935-63032954 | None:intergenic | 40.0% | |
| GATTCAGTTTCGAACATTGG+TGG | + | chr6.1:63034251-63034270 | None:intergenic | 40.0% | |
| GCATTCCTAACATTAGGTCT+AGG | - | chr6.1:63032840-63032859 | MS.gene83309:CDS | 40.0% | |
| GCCAAATATGCGAGGAAATA+TGG | + | chr6.1:63031229-63031248 | None:intergenic | 40.0% | |
| GCCATATTTCCTCGCATATT+TGG | - | chr6.1:63031225-63031244 | MS.gene83309:intron | 40.0% | |
| GGAGTGACTGAATTCAAAGA+AGG | - | chr6.1:63031944-63031963 | MS.gene83309:intron | 40.0% | |
| GGCACATGATATTGATCTGA+GGG | - | chr6.1:63032679-63032698 | MS.gene83309:intron | 40.0% | |
| GGTCCTTTGTGAGATGTAAT+TGG | - | chr6.1:63030761-63030780 | MS.gene83309:intron | 40.0% | |
| TCCCAAAAGATTTAGCTGTG+TGG | + | chr6.1:63033301-63033320 | None:intergenic | 40.0% | |
| TCGGGTCATCATACAAGAAT+TGG | - | chr6.1:63030740-63030759 | MS.gene83309:intron | 40.0% | |
| TCGTAGTGATCTTTCTGCTT+GGG | - | chr6.1:63030379-63030398 | MS.gene83309:CDS | 40.0% | |
| TGAAGTAACAATACGTGTCG+GGG | + | chr6.1:63030917-63030936 | None:intergenic | 40.0% | |
| TGGCACATGATATTGATCTG+AGG | - | chr6.1:63032678-63032697 | MS.gene83309:intron | 40.0% | |
| TGTTCAATAGGTTGCACAAG+GGG | - | chr6.1:63033113-63033132 | MS.gene83309:intron | 40.0% | |
| ! | AGAGATTATGGCCCGTTTTA+AGG | + | chr6.1:63033246-63033265 | None:intergenic | 40.0% |
| ! | AGGGGTGCATCTAGAATAAT+TGG | - | chr6.1:63033144-63033163 | MS.gene83309:intron | 40.0% |
| ! | CATCTGTGGAGAAGAGTATA+AGG | + | chr6.1:63033060-63033079 | None:intergenic | 40.0% |
| ! | CATTATGGACTATTCCTGAC+AGG | - | chr6.1:63033838-63033857 | MS.gene83309:intron | 40.0% |
| ! | CTATGGGAATGGATTCCTTA+CGG | - | chr6.1:63031442-63031461 | MS.gene83309:intron | 40.0% |
| ! | TTCATGTGCTTTTCTCCTTG+TGG | - | chr6.1:63034429-63034448 | MS.gene83309:intron | 40.0% |
| !! | CGTCAGACACAGTTTTAATC+TGG | + | chr6.1:63030881-63030900 | None:intergenic | 40.0% |
| !! | TAAGAGCATTACTGATGGTG+GGG | - | chr6.1:63033531-63033550 | MS.gene83309:intron | 40.0% |
| !!! | CCTACCATTTTTTATGGACC+TGG | + | chr6.1:63031630-63031649 | None:intergenic | 40.0% |
| !!! | CTGCACCCTACCATTTTTTA+TGG | + | chr6.1:63031636-63031655 | None:intergenic | 40.0% |
| !!! | TCCTTTTTTACAACAGGGGT+GGG | - | chr6.1:63033765-63033784 | MS.gene83309:intron | 40.0% |
| !!! | TTCCTTTTTTACAACAGGGG+TGG | - | chr6.1:63033764-63033783 | MS.gene83309:intron | 40.0% |
| ACAGCATGATTGCAATGCAG+TGG | + | chr6.1:63033599-63033618 | None:intergenic | 45.0% | |
| ACTATGACTGAAGGCAATCC+AGG | - | chr6.1:63031609-63031628 | MS.gene83309:CDS | 45.0% | |
| AGATAGTAGGCTGGAATCGT+TGG | + | chr6.1:63031573-63031592 | None:intergenic | 45.0% | |
| AGGACTAATCTCCCACAATG+TGG | - | chr6.1:63034221-63034240 | MS.gene83309:intron | 45.0% | |
| ATCACTACGACAAAGAGAGG+TGG | + | chr6.1:63030369-63030388 | None:intergenic | 45.0% | |
| ATGTCACTCTAACTGAGCGT+TGG | + | chr6.1:63031415-63031434 | None:intergenic | 45.0% | |
| CAAATGCAATTGCGGCACAT+TGG | - | chr6.1:63031755-63031774 | MS.gene83309:CDS | 45.0% | |
| CAGACCGCAATTTACAGCTA+TGG | + | chr6.1:63031735-63031754 | None:intergenic | 45.0% | |
| CCATAATGAGCTGACATCTC+AGG | + | chr6.1:63033826-63033845 | None:intergenic | 45.0% | |
| CCTGAGATGTCAGCTCATTA+TGG | - | chr6.1:63033823-63033842 | MS.gene83309:intron | 45.0% | |
| CTAATCTCCAATGGTTGAGG+AGG | + | chr6.1:63030332-63030351 | None:intergenic | 45.0% | |
| CTCCTCAACCATTGGAGATT+AGG | - | chr6.1:63030330-63030349 | MS.gene83309:CDS | 45.0% | |
| CTGCACCTAGACCTAATGTT+AGG | + | chr6.1:63032848-63032867 | None:intergenic | 45.0% | |
| GCCACTCAATATAGGACGAA+GGG | + | chr6.1:63032327-63032346 | None:intergenic | 45.0% | |
| GTCGTAGTGATCTTTCTGCT+TGG | - | chr6.1:63030378-63030397 | MS.gene83309:CDS | 45.0% | |
| TAGATTACCCAGATGCTTCG+TGG | + | chr6.1:63031251-63031270 | None:intergenic | 45.0% | |
| TAGGAGAATGCATGTCATGC+AGG | - | chr6.1:63031990-63032009 | MS.gene83309:intron | 45.0% | |
| TCCCTTCGTCCTATATTGAG+TGG | - | chr6.1:63032323-63032342 | MS.gene83309:intron | 45.0% | |
| TCTAGATGCACCCCTTAGTT+TGG | + | chr6.1:63033139-63033158 | None:intergenic | 45.0% | |
| ! | ATATTTGGCCACGAAGCATC+TGG | - | chr6.1:63031240-63031259 | MS.gene83309:intron | 45.0% |
| ! | ATTGGTGGTTTGCCACATTG+TGG | + | chr6.1:63034236-63034255 | None:intergenic | 45.0% |
| ! | CACTTTCATGTCTGAGACGT+AGG | - | chr6.1:63032528-63032547 | MS.gene83309:intron | 45.0% |
| ! | TATTTGGCCACGAAGCATCT+GGG | - | chr6.1:63031241-63031260 | MS.gene83309:intron | 45.0% |
| ! | TTGGTGGTTTGCCACATTGT+GGG | + | chr6.1:63034235-63034254 | None:intergenic | 45.0% |
| !! | TGTAACACTTGGTGTGCCAA+AGG | - | chr6.1:63033795-63033814 | MS.gene83309:intron | 45.0% |
| !!! | CCTTTTTTACAACAGGGGTG+GGG | - | chr6.1:63033766-63033785 | MS.gene83309:intron | 45.0% |
| !! | TAAAATAATTAATATTATGT+TGG | - | chr6.1:63032713-63032732 | MS.gene83309:CDS | 5.0% |
| !!! | TTTTATATATTTTTACTTTA+TGG | - | chr6.1:63033986-63034005 | MS.gene83309:intron | 5.0% |
| AGGGGTTGAGGCTAGAAGAA+AGG | - | chr6.1:63034201-63034220 | MS.gene83309:intron | 50.0% | |
| AGTAGGCTGGAATCGTTGGA+CGG | + | chr6.1:63031569-63031588 | None:intergenic | 50.0% | |
| AGTCAGTCCTCCTCAACCAT+TGG | - | chr6.1:63030322-63030341 | MS.gene83309:CDS | 50.0% | |
| CATTAGGTCTAGGTGCAGCA+TGG | - | chr6.1:63032850-63032869 | MS.gene83309:CDS | 50.0% | |
| CCCCACCCCTGTTGTAAAAA+AGG | + | chr6.1:63033769-63033788 | None:intergenic | 50.0% | |
| GAATAATCGACCTGCGCGAT+AGG | + | chr6.1:63033359-63033378 | None:intergenic | 50.0% | |
| GACATCTCAGGCTTCACCTT+TGG | + | chr6.1:63033814-63033833 | None:intergenic | 50.0% | |
| GCGGTCTGCAAATGCAATTG+CGG | - | chr6.1:63031747-63031766 | MS.gene83309:intron | 50.0% | |
| GGCCACTCAATATAGGACGA+AGG | + | chr6.1:63032328-63032347 | None:intergenic | 50.0% | |
| GTACAAAGAACCTATCGCGC+AGG | - | chr6.1:63033346-63033365 | MS.gene83309:intron | 50.0% | |
| TCATGCAGGCTGTGCAAATC+AGG | - | chr6.1:63032004-63032023 | MS.gene83309:intron | 50.0% | |
| TGCACAAGGGGCCAAACTAA+GGG | - | chr6.1:63033125-63033144 | MS.gene83309:intron | 50.0% | |
| TGGGGCTTGACTGTAACACT+TGG | - | chr6.1:63033784-63033803 | MS.gene83309:intron | 50.0% | |
| TTGCACAAGGGGCCAAACTA+AGG | - | chr6.1:63033124-63033143 | MS.gene83309:intron | 50.0% | |
| ! | ATTGTTGAGAGCGTAGGGCT+AGG | - | chr6.1:63031923-63031942 | MS.gene83309:intron | 50.0% |
| ! | CTTAGCTGTGGTGTTTCTGC+AGG | - | chr6.1:63032223-63032242 | MS.gene83309:intron | 50.0% |
| ! | GCAGGATTGTTGAGAGCGTA+GGG | - | chr6.1:63031918-63031937 | MS.gene83309:intron | 50.0% |
| ! | TGCAGGATTGTTGAGAGCGT+AGG | - | chr6.1:63031917-63031936 | MS.gene83309:intron | 50.0% |
| GCACAAGGGGCCAAACTAAG+GGG | - | chr6.1:63033126-63033145 | MS.gene83309:intron | 55.0% | |
| GCTTCGTGGCCAAATATGCG+AGG | + | chr6.1:63031237-63031256 | None:intergenic | 55.0% | |
| CGTGTCGGGGTCGTGAGTGT+TGG | + | chr6.1:63030904-63030923 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 63030308 | 63034641 | 63030308 | ID=MS.gene83309 |
| chr6.1 | mRNA | 63030308 | 63034641 | 63030308 | ID=MS.gene83309.t1;Parent=MS.gene83309 |
| chr6.1 | exon | 63034540 | 63034641 | 63034540 | ID=MS.gene83309.t1.exon1;Parent=MS.gene83309.t1 |
| chr6.1 | CDS | 63034540 | 63034641 | 63034540 | ID=cds.MS.gene83309.t1;Parent=MS.gene83309.t1 |
| chr6.1 | exon | 63033687 | 63033724 | 63033687 | ID=MS.gene83309.t1.exon2;Parent=MS.gene83309.t1 |
| chr6.1 | CDS | 63033687 | 63033724 | 63033687 | ID=cds.MS.gene83309.t1;Parent=MS.gene83309.t1 |
| chr6.1 | exon | 63032705 | 63033027 | 63032705 | ID=MS.gene83309.t1.exon3;Parent=MS.gene83309.t1 |
| chr6.1 | CDS | 63032705 | 63033027 | 63032705 | ID=cds.MS.gene83309.t1;Parent=MS.gene83309.t1 |
| chr6.1 | exon | 63032011 | 63032093 | 63032011 | ID=MS.gene83309.t1.exon4;Parent=MS.gene83309.t1 |
| chr6.1 | CDS | 63032011 | 63032093 | 63032011 | ID=cds.MS.gene83309.t1;Parent=MS.gene83309.t1 |
| chr6.1 | exon | 63031751 | 63031826 | 63031751 | ID=MS.gene83309.t1.exon5;Parent=MS.gene83309.t1 |
| chr6.1 | CDS | 63031751 | 63031826 | 63031751 | ID=cds.MS.gene83309.t1;Parent=MS.gene83309.t1 |
| chr6.1 | exon | 63031582 | 63031643 | 63031582 | ID=MS.gene83309.t1.exon6;Parent=MS.gene83309.t1 |
| chr6.1 | CDS | 63031582 | 63031643 | 63031582 | ID=cds.MS.gene83309.t1;Parent=MS.gene83309.t1 |
| chr6.1 | exon | 63031328 | 63031423 | 63031328 | ID=MS.gene83309.t1.exon7;Parent=MS.gene83309.t1 |
| chr6.1 | CDS | 63031328 | 63031423 | 63031328 | ID=cds.MS.gene83309.t1;Parent=MS.gene83309.t1 |
| chr6.1 | exon | 63031007 | 63031168 | 63031007 | ID=MS.gene83309.t1.exon8;Parent=MS.gene83309.t1 |
| chr6.1 | CDS | 63031007 | 63031168 | 63031007 | ID=cds.MS.gene83309.t1;Parent=MS.gene83309.t1 |
| chr6.1 | exon | 63030308 | 63030424 | 63030308 | ID=MS.gene83309.t1.exon9;Parent=MS.gene83309.t1 |
| chr6.1 | CDS | 63030308 | 63030424 | 63030308 | ID=cds.MS.gene83309.t1;Parent=MS.gene83309.t1 |
| Gene Sequence |
| Protein sequence |
