Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene017069.t1 | XP_003617385.1 | 98.2 | 490 | 9 | 0 | 2 | 491 | 3 | 492 | 1.40E-253 | 885.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene017069.t1 | G7K3B9 | 98.2 | 490 | 9 | 0 | 2 | 491 | 3 | 492 | 1.0e-253 | 885.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene67475 | MS.gene017069 | PPI |
MS.gene64799 | MS.gene017069 | PPI |
MS.gene67474 | MS.gene017069 | PPI |
MS.gene017069 | MS.gene44220 | PPI |
MS.gene28870 | MS.gene017069 | PPI |
MS.gene67709 | MS.gene017069 | PPI |
MS.gene012136 | MS.gene017069 | PPI |
MS.gene017069 | MS.gene59498 | PPI |
MS.gene017069 | MS.gene017610 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene017069.t1 | MTR_5g091000 | 98.163 | 490 | 9 | 0 | 2 | 491 | 3 | 492 | 0.0 | 992 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene017069.t1 | AT2G30880 | 72.946 | 499 | 125 | 6 | 2 | 491 | 7 | 504 | 0.0 | 668 |
MS.gene017069.t1 | AT2G30880 | 79.733 | 375 | 76 | 0 | 2 | 376 | 7 | 381 | 0.0 | 582 |
Find 109 sgRNAs with CRISPR-Local
Find 381 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGATGAGGAGCTACAAAATT+TGG | 0.192196 | 5.1:-72477578 | MS.gene017069:CDS |
AAGCTGCTTCCATCAGTTTC+TGG | 0.243919 | 5.1:+72475868 | None:intergenic |
GGGAATGGTTCTACAAAATT+AGG | 0.266451 | 5.1:-72479092 | MS.gene017069:CDS |
GGACCCAACAACTGGGAAAA+TGG | 0.267982 | 5.1:-72480640 | MS.gene017069:CDS |
TGCTGCTGCCTCGGCGGCTT+CGG | 0.275529 | 5.1:+72477492 | None:intergenic |
CCAGAGAGATGCTGCTATTA+AGG | 0.285614 | 5.1:-72476980 | MS.gene017069:CDS |
CGTCAGCTAGCTTCTGCTTC+TGG | 0.300599 | 5.1:-72481871 | MS.gene017069:CDS |
CAACGAATGGAGCGATATTC+AGG | 0.306147 | 5.1:-72475932 | MS.gene017069:CDS |
GGACCATCAGTAGTCCTATT+TGG | 0.315687 | 5.1:+72478963 | None:intergenic |
TTCTGGTAGAAATCTGTTGC+AGG | 0.325130 | 5.1:-72481854 | MS.gene017069:CDS |
AAATATGTGGCGTACTGAAC+TGG | 0.336452 | 5.1:-72476953 | MS.gene017069:CDS |
CTCTTGGAATGATGCCAAAT+AGG | 0.350376 | 5.1:-72478977 | MS.gene017069:CDS |
AGCATCTGCTGCTTATACTA+TGG | 0.357385 | 5.1:-72477473 | MS.gene017069:CDS |
TGTAGAACCATTCCCACTTA+AGG | 0.357415 | 5.1:+72479100 | None:intergenic |
AAAATTTGGCTCGAGACCTT+CGG | 0.369260 | 5.1:-72477564 | MS.gene017069:CDS |
GTGATCTTGGACCCAACAAC+TGG | 0.369582 | 5.1:-72480648 | MS.gene017069:CDS |
TTTGGTGACAGCTGAGGAAA+TGG | 0.377415 | 5.1:-72480683 | MS.gene017069:intron |
AACTTCCTCATTTAGATATC+GGG | 0.385027 | 5.1:-72480157 | MS.gene017069:intron |
TGAAAACACAGAGAATAGTT+TGG | 0.385837 | 5.1:-72481905 | MS.gene017069:CDS |
CTCCATTCGTTGTCACCAAC+TGG | 0.392987 | 5.1:+72475943 | None:intergenic |
AAATTTGGCTCGAGACCTTC+GGG | 0.393652 | 5.1:-72477563 | MS.gene017069:CDS |
ATTTCTTTGCGAAATGCTCT+TGG | 0.394738 | 5.1:-72478993 | MS.gene017069:CDS |
GAACGAACGTTGGGTGATCT+TGG | 0.411577 | 5.1:-72480661 | MS.gene017069:CDS |
TAAGAGCGGAAGAGAAGGTC+AGG | 0.418970 | 5.1:-72476888 | MS.gene017069:CDS |
CAATGCTGAAGCTAGGATAA+AGG | 0.428297 | 5.1:-72476854 | MS.gene017069:CDS |
ATAGGAAACACTAAGAGTTA+AGG | 0.432753 | 5.1:-72477599 | MS.gene017069:intron |
AGGCAAGGATAGCCGATGTA+AGG | 0.435309 | 5.1:-72475903 | MS.gene017069:CDS |
CTCCTGGTGCAGCTCGAGCA+TGG | 0.438189 | 5.1:-72480097 | MS.gene017069:CDS |
TCCTGGTGCAGCTCGAGCAT+GGG | 0.444038 | 5.1:-72480096 | MS.gene017069:CDS |
TTCCTATGCGCGGAGACTCC+TGG | 0.453816 | 5.1:-72480113 | MS.gene017069:CDS |
CTGGCTGAATGTTGTTTACC+TGG | 0.455370 | 5.1:+72475962 | None:intergenic |
CCTTAATAGCAGCATCTCTC+TGG | 0.464490 | 5.1:+72476980 | None:intergenic |
ATTCCAGTGGTTAGCCAGCC+AGG | 0.464960 | 5.1:-72475841 | MS.gene017069:CDS |
AGCAGCAGATGCTGCTGCCT+CGG | 0.468375 | 5.1:+72477483 | None:intergenic |
GTTGTTATCATCAGGGCTGA+TGG | 0.475883 | 5.1:+72475782 | None:intergenic |
CTACATTCTCTGCAGGGATA+GGG | 0.482199 | 5.1:+72476001 | None:intergenic |
AGCCAGTTGGTGACAACGAA+TGG | 0.489395 | 5.1:-72475945 | MS.gene017069:CDS |
CTTTATCCTAGCTTCAGCAT+TGG | 0.489764 | 5.1:+72476855 | None:intergenic |
ACTACATTCTCTGCAGGGAT+AGG | 0.492687 | 5.1:+72476000 | None:intergenic |
GAGGAAATGGAACGAACGTT+GGG | 0.494683 | 5.1:-72480670 | MS.gene017069:CDS |
ATGTGAACTACATTCTCTGC+AGG | 0.496979 | 5.1:+72475994 | None:intergenic |
GGAAAAGTTAATTACAGTCT+CGG | 0.501614 | 5.1:+72481813 | None:intergenic |
TAGGACTACTGATGGTCCTA+TGG | 0.502862 | 5.1:-72478958 | MS.gene017069:CDS |
CATGCTTACTTGAAATTCAC+AGG | 0.510486 | 5.1:+72480433 | None:intergenic |
ACCCATGCTCGAGCTGCACC+AGG | 0.524783 | 5.1:+72480095 | None:intergenic |
GCAGGAGGTGTATGCACAGA+AGG | 0.529056 | 5.1:-72477389 | MS.gene017069:intron |
GTGAATTCCTTAAGTGGGAA+TGG | 0.529448 | 5.1:-72479107 | MS.gene017069:CDS |
AGAATTGTTCCCTTGACAGT+TGG | 0.531526 | 5.1:+72480487 | None:intergenic |
GAAGCTGTGAATTCCTTAAG+TGG | 0.533425 | 5.1:-72479113 | MS.gene017069:CDS |
ATACCTGGCTGGCTAACCAC+TGG | 0.534090 | 5.1:+72475838 | None:intergenic |
AGTGGCAACAAAAGAGAAGC+AGG | 0.535884 | 5.1:-72476812 | MS.gene017069:CDS |
TATCGGGACACCACAGAAGA+AGG | 0.538158 | 5.1:-72480141 | MS.gene017069:CDS |
AAGAAATGAGCCAACTGTCA+AGG | 0.539148 | 5.1:-72480497 | MS.gene017069:CDS |
TGTAGTAAGAGCGGAAGAGA+AGG | 0.540021 | 5.1:-72476893 | MS.gene017069:CDS |
ACATTCCGAGGCTGTTGAGT+TGG | 0.543936 | 5.1:+72479043 | None:intergenic |
GGCAAGGATAGCCGATGTAA+GGG | 0.546348 | 5.1:-72475902 | MS.gene017069:CDS |
ATGATTGTTAAATCATCCAT+AGG | 0.546789 | 5.1:+72478942 | None:intergenic |
AATATGTGGCGTACTGAACT+GGG | 0.547593 | 5.1:-72476952 | MS.gene017069:CDS |
AGAAACTGATGGAAGCAGCT+TGG | 0.549548 | 5.1:-72475866 | MS.gene017069:CDS |
AGTGGGCTACCGAAGTATGA+TGG | 0.552759 | 5.1:-72480291 | MS.gene017069:CDS |
AAAAGATTCTGAGAAGCAGC+AGG | 0.553932 | 5.1:-72477407 | MS.gene017069:CDS |
GTCTCGGATCTCTTAAGAAG+TGG | 0.556862 | 5.1:+72481829 | None:intergenic |
CTGAGGCCAATGCTGAAGCT+AGG | 0.557271 | 5.1:-72476861 | MS.gene017069:CDS |
TGCTAAAAGCACAACTTCAA+AGG | 0.561884 | 5.1:-72476768 | MS.gene017069:intron |
TGCAGCCAACTCAACAGCCT+CGG | 0.564100 | 5.1:-72479048 | MS.gene017069:CDS |
GGTTTGCTCTAGAAACACTT+AGG | 0.566012 | 5.1:+72476022 | None:intergenic |
AGAAATGAGCCAACTGTCAA+GGG | 0.571886 | 5.1:-72480496 | MS.gene017069:CDS |
GGTGATGATTGATACCTGGC+TGG | 0.573491 | 5.1:+72475827 | None:intergenic |
CACCAGGAGTCTCCGCGCAT+AGG | 0.573977 | 5.1:+72480111 | None:intergenic |
AGCAGATGCTGCTGCCTCGG+CGG | 0.574207 | 5.1:+72477486 | None:intergenic |
AGTTCACATGGCAACAGACC+AGG | 0.584699 | 5.1:-72475980 | MS.gene017069:CDS |
GGATGATTTAACAATCATGA+AGG | 0.585369 | 5.1:-72478937 | MS.gene017069:intron |
TCGTGGTGATGATTGATACC+TGG | 0.587331 | 5.1:+72475823 | None:intergenic |
AAGAGTTTGATCCTTGTTCG+TGG | 0.588496 | 5.1:+72475806 | None:intergenic |
AACACTAAGAGTTAAGGATG+AGG | 0.588499 | 5.1:-72477593 | MS.gene017069:CDS |
TGAGGAAATGGAACGAACGT+TGG | 0.588772 | 5.1:-72480671 | MS.gene017069:CDS |
TCTGGTAGAAATCTGTTGCA+GGG | 0.589058 | 5.1:-72481853 | MS.gene017069:CDS |
AGAAGCAACTGTAGTAAGAG+CGG | 0.589787 | 5.1:-72476902 | MS.gene017069:CDS |
ATGCCAAATAGGACTACTGA+TGG | 0.592713 | 5.1:-72478966 | MS.gene017069:CDS |
GTCGCAGCACCAGAAACTGA+TGG | 0.593220 | 5.1:-72475877 | MS.gene017069:CDS |
TGCAGAGAATGTAGTTCACA+TGG | 0.596449 | 5.1:-72475992 | MS.gene017069:CDS |
AAGCTGTGAATTCCTTAAGT+GGG | 0.598255 | 5.1:-72479112 | MS.gene017069:CDS |
ATCAATCATCACCACGAACA+AGG | 0.599152 | 5.1:-72475817 | MS.gene017069:CDS |
AGCTGTACAGAGAGAATCAG+TGG | 0.602753 | 5.1:-72476830 | MS.gene017069:CDS |
AGGAAATAATCCTTCTTCTG+TGG | 0.603393 | 5.1:+72480131 | None:intergenic |
AATTTCTTTAGAACATTCCG+AGG | 0.603804 | 5.1:+72479031 | None:intergenic |
TCACACCAGTGCCACTCAGT+TGG | 0.610667 | 5.1:-72479153 | MS.gene017069:intron |
TGATCTTGGACCCAACAACT+GGG | 0.611893 | 5.1:-72480647 | MS.gene017069:CDS |
GAAGGATTATTTCCTATGCG+CGG | 0.615384 | 5.1:-72480123 | MS.gene017069:CDS |
CTATTAAGGAGGCAAATATG+TGG | 0.616871 | 5.1:-72476966 | MS.gene017069:CDS |
AGAGAAGGTCAGGGTTGCTG+AGG | 0.616929 | 5.1:-72476878 | MS.gene017069:CDS |
TTCAACTATAACAGAAATAG+CGG | 0.620673 | 5.1:-72477533 | MS.gene017069:CDS |
TAGTTGAATCACGTGCCCGA+AGG | 0.632429 | 5.1:+72477548 | None:intergenic |
TGATCCCACTGAAGAAAATG+TGG | 0.636056 | 5.1:-72476055 | MS.gene017069:CDS |
TGAGACTGCCGAAGCCGCCG+AGG | 0.640696 | 5.1:-72477500 | MS.gene017069:CDS |
ATGCAGCATCCATCATACTT+CGG | 0.643638 | 5.1:+72480282 | None:intergenic |
GTAAACAACATTCAGCCAGT+TGG | 0.644235 | 5.1:-72475958 | MS.gene017069:CDS |
GAGCGATATTCAGGCTACAG+AGG | 0.646570 | 5.1:-72475923 | MS.gene017069:CDS |
AAGAGCGGAAGAGAAGGTCA+GGG | 0.649867 | 5.1:-72476887 | MS.gene017069:CDS |
ATATTCAGGCTACAGAGGCA+AGG | 0.654585 | 5.1:-72475918 | MS.gene017069:CDS |
GAGAGATGCTGCTATTAAGG+AGG | 0.656995 | 5.1:-72476977 | MS.gene017069:CDS |
CTTATACTATGGATGAGCAA+CGG | 0.660420 | 5.1:-72477462 | MS.gene017069:CDS |
AATAGCAGCATCTCTCTGGT+CGG | 0.661298 | 5.1:+72476984 | None:intergenic |
TGTGAACTACATTCTCTGCA+GGG | 0.666902 | 5.1:+72475995 | None:intergenic |
AGATTCTGAGAAGCAGCAGG+AGG | 0.670302 | 5.1:-72477404 | MS.gene017069:CDS |
ATTCACAGGAGATACAGTAA+TGG | 0.674475 | 5.1:+72480447 | None:intergenic |
AAGCAGCTTGGATATTCCAG+TGG | 0.674719 | 5.1:-72475854 | MS.gene017069:CDS |
ATGTTCTAAAGAAATTGAAG+CGG | 0.687851 | 5.1:-72479024 | MS.gene017069:CDS |
TGCTGCGACTTCCCTTACAT+CGG | 0.697961 | 5.1:+72475891 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTATATTTTTATAATTTT+CGG | - | chr5.1:72477475-72477494 | MS.gene017069:CDS | 0.0% |
!! | AATATAAAAATGACAAAAAA+AGG | + | chr5.1:72477464-72477483 | None:intergenic | 10.0% |
!! | TAATTGTTGAAAATTTAAAA+AGG | - | chr5.1:72476674-72476693 | MS.gene017069:intron | 10.0% |
!!! | AATTTATAAGATATTTTTAG+CGG | - | chr5.1:72477760-72477779 | MS.gene017069:intron | 10.0% |
!!! | ATAAAATACTAATCAATTTT+GGG | + | chr5.1:72476130-72476149 | None:intergenic | 10.0% |
!!! | CAATATATTTTGAAATTAAA+TGG | - | chr5.1:72477710-72477729 | MS.gene017069:intron | 10.0% |
!!! | TATACTAATTTGATTTATTT+CGG | - | chr5.1:72477392-72477411 | MS.gene017069:CDS | 10.0% |
!!! | TGAAAAATTTGTTATTTTTT+TGG | - | chr5.1:72477013-72477032 | MS.gene017069:CDS | 10.0% |
!!! | TTTTGTTATATTTTAGTTTT+TGG | + | chr5.1:72477943-72477962 | None:intergenic | 10.0% |
!! | AAAAAAACAAACTGAAAAAT+TGG | + | chr5.1:72478135-72478154 | None:intergenic | 15.0% |
!! | AAAATTTAAAAAGGATTGAA+GGG | - | chr5.1:72476683-72476702 | MS.gene017069:intron | 15.0% |
!! | AAATCAAATGATAAAAAAAG+TGG | - | chr5.1:72481172-72481191 | MS.gene017069:intron | 15.0% |
!! | AATTATATATAATTTCAACG+TGG | - | chr5.1:72476215-72476234 | MS.gene017069:intron | 15.0% |
!! | ATAGAATAAATAACAATAAG+AGG | + | chr5.1:72478418-72478437 | None:intergenic | 15.0% |
!! | CAAAAGAAAAAGAAAATTAA+GGG | - | chr5.1:72479423-72479442 | MS.gene017069:intron | 15.0% |
!! | TATAATACTAGAGAATTAAA+TGG | - | chr5.1:72481443-72481462 | MS.gene017069:intron | 15.0% |
!!! | AATTTTTTTAGGTTTCTTTT+TGG | + | chr5.1:72479555-72479574 | None:intergenic | 15.0% |
!!! | ATATATTATTTTTGTGTGAA+GGG | - | chr5.1:72477129-72477148 | MS.gene017069:intron | 15.0% |
!!! | ATGAAATTTTTAATTAGACA+AGG | - | chr5.1:72480004-72480023 | MS.gene017069:intron | 15.0% |
!!! | ATTTATAAGATATTTTTAGC+GGG | - | chr5.1:72477761-72477780 | MS.gene017069:intron | 15.0% |
!!! | GATAAAATACTAATCAATTT+TGG | + | chr5.1:72476131-72476150 | None:intergenic | 15.0% |
!!! | GTTATTTTTCTTTGATTTTT+AGG | - | chr5.1:72477189-72477208 | MS.gene017069:intron | 15.0% |
!!! | TATTTTTTTTAACTGTTAAC+AGG | - | chr5.1:72481574-72481593 | MS.gene017069:intron | 15.0% |
!!! | TCATGTTTTCAAATTATTAT+CGG | - | chr5.1:72476854-72476873 | MS.gene017069:CDS | 15.0% |
!!! | TTCAATTTTTATTGTGTTAA+TGG | - | chr5.1:72476009-72476028 | MS.gene017069:CDS | 15.0% |
!!! | TTTTTTTCTTAGTATATTGT+GGG | - | chr5.1:72479919-72479938 | MS.gene017069:intron | 15.0% |
!! | AAGAAAGAAAAAAAACACAA+AGG | + | chr5.1:72478969-72478988 | None:intergenic | 20.0% |
!! | AAGACTTCAATTATTATTGA+AGG | + | chr5.1:72479334-72479353 | None:intergenic | 20.0% |
!! | ACTAAAAATTCATATGGATT+AGG | - | chr5.1:72481366-72481385 | MS.gene017069:intron | 20.0% |
!! | ACTTGAAGATTAATATGAAA+AGG | + | chr5.1:72475989-72476008 | None:intergenic | 20.0% |
!! | AGAAAGAAAAAAAACACAAA+GGG | + | chr5.1:72478968-72478987 | None:intergenic | 20.0% |
!! | ATACACACTAAAAATTCATA+TGG | - | chr5.1:72481360-72481379 | MS.gene017069:intron | 20.0% |
!! | ATTCATAAGAAGATTTGATT+CGG | + | chr5.1:72481059-72481078 | None:intergenic | 20.0% |
!! | CACAATATACTAAGAAAAAA+AGG | + | chr5.1:72479920-72479939 | None:intergenic | 20.0% |
!! | CCAATATGAAATTAAAAACA+AGG | + | chr5.1:72477686-72477705 | None:intergenic | 20.0% |
!! | CTTGAAGATTAATATGAAAA+GGG | + | chr5.1:72475988-72476007 | None:intergenic | 20.0% |
!! | GAAAATTTAAAAAGGATTGA+AGG | - | chr5.1:72476682-72476701 | MS.gene017069:intron | 20.0% |
!! | GCAAAAGAAAAAGAAAATTA+AGG | - | chr5.1:72479422-72479441 | MS.gene017069:intron | 20.0% |
!! | TCAGTTAATCAAATAAAAAG+AGG | + | chr5.1:72475925-72475944 | None:intergenic | 20.0% |
!! | TTCAGAAAAACACAATAAAT+GGG | - | chr5.1:72479352-72479371 | MS.gene017069:intron | 20.0% |
!! | TTGAAGATTAATATGAAAAG+GGG | + | chr5.1:72475987-72476006 | None:intergenic | 20.0% |
!!! | AACATTCCATAATTTTAAAC+AGG | + | chr5.1:72478262-72478281 | None:intergenic | 20.0% |
!!! | ACATTCCATAATTTTAAACA+GGG | + | chr5.1:72478261-72478280 | None:intergenic | 20.0% |
!!! | CATATATTATTTTTGTGTGA+AGG | - | chr5.1:72477128-72477147 | MS.gene017069:intron | 20.0% |
!!! | CATTGCTTGTATTTTATAAA+CGG | - | chr5.1:72479745-72479764 | MS.gene017069:intron | 20.0% |
!!! | CCTTGTTTTTAATTTCATAT+TGG | - | chr5.1:72477683-72477702 | MS.gene017069:intron | 20.0% |
!!! | CTTTTTTTCTTAGTATATTG+TGG | - | chr5.1:72479918-72479937 | MS.gene017069:intron | 20.0% |
!!! | GTTATATTTTAGTTTTTGGA+AGG | + | chr5.1:72477939-72477958 | None:intergenic | 20.0% |
!!! | TAAAATTTTCTCTAAAAGCT+TGG | - | chr5.1:72478932-72478951 | MS.gene017069:intron | 20.0% |
!!! | TAAACTTTTACAATTCATCT+TGG | + | chr5.1:72476585-72476604 | None:intergenic | 20.0% |
!!! | TACAAATTGATCCATTTTAA+TGG | + | chr5.1:72478465-72478484 | None:intergenic | 20.0% |
!!! | TAGATGATACATTAGTTTAT+AGG | + | chr5.1:72481120-72481139 | None:intergenic | 20.0% |
!!! | TTCCTTCAATAATTTTCTAA+GGG | - | chr5.1:72478297-72478316 | MS.gene017069:intron | 20.0% |
!!! | TTTTTTATACTCACGTTAAT+AGG | - | chr5.1:72478334-72478353 | MS.gene017069:intron | 20.0% |
!!! | TTTTTTCTTAGTATATTGTG+GGG | - | chr5.1:72479920-72479939 | MS.gene017069:intron | 20.0% |
! | AAACAAACTGAAAAATTGGA+CGG | + | chr5.1:72478131-72478150 | None:intergenic | 25.0% |
! | AAACAAGATTGGATATTCAA+AGG | + | chr5.1:72476930-72476949 | None:intergenic | 25.0% |
! | AAACCTTAATGAATGAAAAG+GGG | - | chr5.1:72479243-72479262 | MS.gene017069:intron | 25.0% |
! | AAAGCAATAAAGAACCATAA+AGG | + | chr5.1:72480065-72480084 | None:intergenic | 25.0% |
! | AACCCTTAGAAAATTATTGA+AGG | + | chr5.1:72478302-72478321 | None:intergenic | 25.0% |
! | AATTAAATGGAAACTTCAGA+TGG | - | chr5.1:72481456-72481475 | MS.gene017069:intron | 25.0% |
! | AATTCTTGCTAAAACTTGTA+AGG | - | chr5.1:72478218-72478237 | MS.gene017069:intron | 25.0% |
! | AGACAAGGAATATTTGTATA+GGG | - | chr5.1:72480019-72480038 | MS.gene017069:intron | 25.0% |
! | AGGATTTATCATAATGAATC+AGG | - | chr5.1:72481288-72481307 | MS.gene017069:intron | 25.0% |
! | ATACAAGCAATGTAGTAATA+AGG | + | chr5.1:72479737-72479756 | None:intergenic | 25.0% |
! | ATGATTGTTAAATCATCCAT+AGG | + | chr5.1:72478775-72478794 | None:intergenic | 25.0% |
! | ATTTCAATAACCTTGAATTC+AGG | - | chr5.1:72476341-72476360 | MS.gene017069:intron | 25.0% |
! | CAAGAATTTAGTGAAAGTAA+TGG | + | chr5.1:72478206-72478225 | None:intergenic | 25.0% |
! | CTTCAGAAAAACACAATAAA+TGG | - | chr5.1:72479351-72479370 | MS.gene017069:intron | 25.0% |
! | GAAACCTTAATGAATGAAAA+GGG | - | chr5.1:72479242-72479261 | MS.gene017069:intron | 25.0% |
! | GAGTAAAAATAAATCAGACA+AGG | + | chr5.1:72478541-72478560 | None:intergenic | 25.0% |
! | GAGTACGAAGAAAAAATTAT+GGG | - | chr5.1:72480681-72480700 | MS.gene017069:intron | 25.0% |
! | GTTAATTTATGTGTGACAAA+GGG | + | chr5.1:72476169-72476188 | None:intergenic | 25.0% |
! | TAACTTCCTCATTTAGATAT+CGG | - | chr5.1:72477556-72477575 | MS.gene017069:CDS | 25.0% |
! | TAAGAAAGTCAAAACAAGAT+TGG | + | chr5.1:72476941-72476960 | None:intergenic | 25.0% |
! | TACAAAATGCTATCAAATAG+AGG | - | chr5.1:72480513-72480532 | MS.gene017069:intron | 25.0% |
! | TAGAAGATTAAGCTAAACTA+TGG | + | chr5.1:72478391-72478410 | None:intergenic | 25.0% |
! | TAGACAAGGAATATTTGTAT+AGG | - | chr5.1:72480018-72480037 | MS.gene017069:intron | 25.0% |
! | TGAAACCTTAATGAATGAAA+AGG | - | chr5.1:72479241-72479260 | MS.gene017069:intron | 25.0% |
! | TGTTAATTTATGTGTGACAA+AGG | + | chr5.1:72476170-72476189 | None:intergenic | 25.0% |
! | TTCAACTATAACAGAAATAG+CGG | - | chr5.1:72480181-72480200 | MS.gene017069:intron | 25.0% |
! | TTCATAAGAAGATTTGATTC+GGG | + | chr5.1:72481058-72481077 | None:intergenic | 25.0% |
! | TTTATGGTTCTTTATTGCTT+TGG | - | chr5.1:72480064-72480083 | MS.gene017069:intron | 25.0% |
!! | ACAAATTTTTCACATAAGCT+AGG | + | chr5.1:72477005-72477024 | None:intergenic | 25.0% |
!! | CTTCCTTCAATAATTTTCTA+AGG | - | chr5.1:72478296-72478315 | MS.gene017069:intron | 25.0% |
!! | TAACATAACCCTATTTTACT+TGG | - | chr5.1:72477316-72477335 | MS.gene017069:intron | 25.0% |
!! | TATGAATTATGAGTTCGTTT+TGG | - | chr5.1:72481492-72481511 | MS.gene017069:intron | 25.0% |
!! | TTGTTGATTGTGGAAAATAA+CGG | + | chr5.1:72480584-72480603 | None:intergenic | 25.0% |
!! | TTTCTACTCTTTTTCCTTTT+AGG | + | chr5.1:72477824-72477843 | None:intergenic | 25.0% |
!! | TTTTCAAATTATTATCGGTG+TGG | - | chr5.1:72476859-72476878 | MS.gene017069:CDS | 25.0% |
!!! | AAAATGCTGTTTTACTCAAT+AGG | - | chr5.1:72480097-72480116 | MS.gene017069:CDS | 25.0% |
!!! | AAATTGTTTGTTGTAGCTAA+AGG | - | chr5.1:72480659-72480678 | MS.gene017069:CDS | 25.0% |
!!! | AGAAGGTATGCTTTAATTTT+TGG | - | chr5.1:72480342-72480361 | MS.gene017069:intron | 25.0% |
!!! | ATCACACACTCAATTTTTTT+AGG | + | chr5.1:72479566-72479585 | None:intergenic | 25.0% |
!!! | ATCTTGGTTTTACCTAAATT+TGG | + | chr5.1:72476569-72476588 | None:intergenic | 25.0% |
!!! | ATGTTCTAAAGAAATTGAAG+CGG | - | chr5.1:72478690-72478709 | MS.gene017069:intron | 25.0% |
!!! | GTTGCTTGTTTTTACTTAAT+GGG | + | chr5.1:72481089-72481108 | None:intergenic | 25.0% |
!!! | TGAATTGGAATATCGATTTT+CGG | - | chr5.1:72481029-72481048 | MS.gene017069:intron | 25.0% |
!!! | TGGAAAATTTTCTAGCAAAA+AGG | + | chr5.1:72479535-72479554 | None:intergenic | 25.0% |
!!! | TGTTGCTTGTTTTTACTTAA+TGG | + | chr5.1:72481090-72481109 | None:intergenic | 25.0% |
AAATTAACACTTACGTGATC+TGG | - | chr5.1:72476181-72476200 | MS.gene017069:intron | 30.0% | |
AACTTCCTCATTTAGATATC+GGG | - | chr5.1:72477557-72477576 | MS.gene017069:CDS | 30.0% | |
AATAGGTTTCTTCTTGGAAA+GGG | - | chr5.1:72478351-72478370 | MS.gene017069:intron | 30.0% | |
AGATAGAACAAACCAAAATG+AGG | + | chr5.1:72478808-72478827 | None:intergenic | 30.0% | |
ATAGGAAACACTAAGAGTTA+AGG | - | chr5.1:72480115-72480134 | MS.gene017069:CDS | 30.0% | |
ATGAAATTAAAAACAAGGCG+AGG | + | chr5.1:72477681-72477700 | None:intergenic | 30.0% | |
ATGAATCATATTAGAACCCA+AGG | + | chr5.1:72477344-72477363 | None:intergenic | 30.0% | |
ATGCACTGAACAAAAGAAAT+AGG | - | chr5.1:72479706-72479725 | MS.gene017069:intron | 30.0% | |
ATTAACAAAGCTTCAAGCAA+GGG | + | chr5.1:72480992-72481011 | None:intergenic | 30.0% | |
ATTTGTATAGGGATGTAGAT+CGG | - | chr5.1:72480030-72480049 | MS.gene017069:intron | 30.0% | |
CAAAATATATCTCTCTCAGA+AGG | + | chr5.1:72478018-72478037 | None:intergenic | 30.0% | |
CAAATGATAAAAAAAGTGGC+TGG | - | chr5.1:72481176-72481195 | MS.gene017069:intron | 30.0% | |
CAACTCTTGAAAAACTGTTT+CGG | - | chr5.1:72480381-72480400 | MS.gene017069:intron | 30.0% | |
CGGTTATCAAAATTGTGAAT+TGG | - | chr5.1:72481014-72481033 | MS.gene017069:intron | 30.0% | |
CTATCAAATAGAGGTTATAG+CGG | - | chr5.1:72480522-72480541 | MS.gene017069:intron | 30.0% | |
CTCATTATGATTCAACAAAC+TGG | + | chr5.1:72479671-72479690 | None:intergenic | 30.0% | |
GATACACATGTATCATAAGA+TGG | - | chr5.1:72481410-72481429 | MS.gene017069:intron | 30.0% | |
GATAGAACAAACCAAAATGA+GGG | + | chr5.1:72478807-72478826 | None:intergenic | 30.0% | |
GGAAAAGTTAATTACAGTCT+CGG | + | chr5.1:72475904-72475923 | None:intergenic | 30.0% | |
GGAGTACGAAGAAAAAATTA+TGG | - | chr5.1:72480680-72480699 | MS.gene017069:intron | 30.0% | |
GGATGATTTAACAATCATGA+AGG | - | chr5.1:72478777-72478796 | MS.gene017069:intron | 30.0% | |
GGGTCATACAAATCATATAT+TGG | - | chr5.1:72477496-72477515 | MS.gene017069:CDS | 30.0% | |
GTACTGAAGGGAAAAATATA+AGG | + | chr5.1:72478885-72478904 | None:intergenic | 30.0% | |
GTTACTTAATTCACGTGAAT+TGG | + | chr5.1:72476469-72476488 | None:intergenic | 30.0% | |
GTTCTTGCTTTCCATTAAAA+TGG | - | chr5.1:72478451-72478470 | MS.gene017069:intron | 30.0% | |
TAACCGCTATTTAACAACAT+TGG | + | chr5.1:72480422-72480441 | None:intergenic | 30.0% | |
TAATAGGTTTCTTCTTGGAA+AGG | - | chr5.1:72478350-72478369 | MS.gene017069:intron | 30.0% | |
TACAAAGTTGACAAAAAACG+TGG | - | chr5.1:72481202-72481221 | MS.gene017069:intron | 30.0% | |
TATTAACAAAGCTTCAAGCA+AGG | + | chr5.1:72480993-72481012 | None:intergenic | 30.0% | |
TATTTAACAACATTGGCCAA+GGG | + | chr5.1:72480415-72480434 | None:intergenic | 30.0% | |
TCATACCTTATACTGTTAGA+AGG | - | chr5.1:72479095-72479114 | MS.gene017069:CDS | 30.0% | |
TGAAAACACAGAGAATAGTT+TGG | - | chr5.1:72475809-72475828 | MS.gene017069:CDS | 30.0% | |
TGCAACACATTCAAAACTTA+GGG | + | chr5.1:72476523-72476542 | None:intergenic | 30.0% | |
TGCAGATTAAGATTGAAACA+CGG | + | chr5.1:72478907-72478926 | None:intergenic | 30.0% | |
TTATTTCGGTGAATTACAGT+GGG | - | chr5.1:72477406-72477425 | MS.gene017069:CDS | 30.0% | |
TTGTAATTCAAATGCGTTGT+GGG | - | chr5.1:72476780-72476799 | MS.gene017069:CDS | 30.0% | |
TTGTAATTCAAATGTGCTGT+GGG | - | chr5.1:72476045-72476064 | MS.gene017069:CDS | 30.0% | |
TTGTTAAATAGCGGTTATAG+TGG | - | chr5.1:72480425-72480444 | MS.gene017069:intron | 30.0% | |
TTTATTTCGGTGAATTACAG+TGG | - | chr5.1:72477405-72477424 | MS.gene017069:CDS | 30.0% | |
TTTGTAATTCAAATGTGCTG+TGG | - | chr5.1:72476044-72476063 | MS.gene017069:CDS | 30.0% | |
! | GAGAGAGATATATTTTGTGA+GGG | - | chr5.1:72478021-72478040 | MS.gene017069:intron | 30.0% |
! | GGGTGTAACTAAATGTTTTT+GGG | + | chr5.1:72476110-72476129 | None:intergenic | 30.0% |
! | TCATGCCCTGTTTAAAATTA+TGG | - | chr5.1:72478253-72478272 | MS.gene017069:intron | 30.0% |
! | TGAGAGAGATATATTTTGTG+AGG | - | chr5.1:72478020-72478039 | MS.gene017069:intron | 30.0% |
! | TGGGTGTAACTAAATGTTTT+TGG | + | chr5.1:72476111-72476130 | None:intergenic | 30.0% |
! | TTATCCACATTTTCTTCAGT+GGG | + | chr5.1:72481666-72481685 | None:intergenic | 30.0% |
! | TTTATCCACATTTTCTTCAG+TGG | + | chr5.1:72481667-72481686 | None:intergenic | 30.0% |
!! | AATTTCTTTAGAACATTCCG+AGG | + | chr5.1:72478686-72478705 | None:intergenic | 30.0% |
!! | AGGGTATTTTTGTCAAATCT+GGG | - | chr5.1:72476702-72476721 | MS.gene017069:intron | 30.0% |
!! | AGGTATGCTTTAATTTTTGG+CGG | - | chr5.1:72480345-72480364 | MS.gene017069:intron | 30.0% |
!! | CAGTTTGTTGAATCATAATG+AGG | - | chr5.1:72479669-72479688 | MS.gene017069:intron | 30.0% |
!! | GCTTGAAGCTTTGTTAATAA+CGG | - | chr5.1:72480994-72481013 | MS.gene017069:intron | 30.0% |
!! | GGTGTAACTAAATGTTTTTG+GGG | + | chr5.1:72476109-72476128 | None:intergenic | 30.0% |
!! | TTTTCCTTTTAGGAACCTAA+CGG | + | chr5.1:72477814-72477833 | None:intergenic | 30.0% |
!!! | AAGGGTATTTTTGTCAAATC+TGG | - | chr5.1:72476701-72476720 | MS.gene017069:intron | 30.0% |
AACACTAAGAGTTAAGGATG+AGG | - | chr5.1:72480121-72480140 | MS.gene017069:CDS | 35.0% | |
AACGTGAACTCAATTTACGT+TGG | - | chr5.1:72476265-72476284 | MS.gene017069:intron | 35.0% | |
AAGATGACTGCTTAGTTGTT+TGG | - | chr5.1:72477846-72477865 | MS.gene017069:intron | 35.0% | |
AAGCTGTGAATTCCTTAAGT+GGG | - | chr5.1:72478602-72478621 | MS.gene017069:intron | 35.0% | |
AATATATCTCTCTCAGAAGG+AGG | + | chr5.1:72478015-72478034 | None:intergenic | 35.0% | |
AATGCATTCAGCTTTCATGA+TGG | - | chr5.1:72478841-72478860 | MS.gene017069:intron | 35.0% | |
AATGGATCAGTACGAAATCT+AGG | + | chr5.1:72476405-72476424 | None:intergenic | 35.0% | |
ACACATCAAGAAGCAACAAA+AGG | + | chr5.1:72479026-72479045 | None:intergenic | 35.0% | |
ACGTTCCTTCTAACAGTATA+AGG | + | chr5.1:72479103-72479122 | None:intergenic | 35.0% | |
AGCTAAACTATGGTATTCAG+CGG | + | chr5.1:72478381-72478400 | None:intergenic | 35.0% | |
AGGAAATAATCCTTCTTCTG+TGG | + | chr5.1:72477586-72477605 | None:intergenic | 35.0% | |
AGGGAAAAGTAGTAACACTT+TGG | - | chr5.1:72477148-72477167 | MS.gene017069:intron | 35.0% | |
ATAAGCTAGGTAACATTCGA+GGG | + | chr5.1:72476992-72477011 | None:intergenic | 35.0% | |
ATGAATCACCATCTATCCTT+TGG | + | chr5.1:72481237-72481256 | None:intergenic | 35.0% | |
ATTCAATCGTCTTCATTGAC+TGG | - | chr5.1:72479165-72479184 | MS.gene017069:intron | 35.0% | |
ATTCACAGGAGATACAGTAA+TGG | + | chr5.1:72477270-72477289 | None:intergenic | 35.0% | |
ATTTCTTTGCGAAATGCTCT+TGG | - | chr5.1:72478721-72478740 | MS.gene017069:intron | 35.0% | |
CACAACGCATTTGAATTACA+AGG | + | chr5.1:72476781-72476800 | None:intergenic | 35.0% | |
CACGTTAATAGGTTTCTTCT+TGG | - | chr5.1:72478345-72478364 | MS.gene017069:intron | 35.0% | |
CATGCTTACTTGAAATTCAC+AGG | + | chr5.1:72477284-72477303 | None:intergenic | 35.0% | |
CTATTAAGGAGGCAAATATG+TGG | - | chr5.1:72480748-72480767 | MS.gene017069:intron | 35.0% | |
CTATTTAACAACATTGGCCA+AGG | + | chr5.1:72480416-72480435 | None:intergenic | 35.0% | |
CTGAAAAATTGGACGGAAAA+AGG | + | chr5.1:72478124-72478143 | None:intergenic | 35.0% | |
CTGCAACACATTCAAAACTT+AGG | + | chr5.1:72476524-72476543 | None:intergenic | 35.0% | |
CTTATACTATGGATGAGCAA+CGG | - | chr5.1:72480252-72480271 | MS.gene017069:intron | 35.0% | |
CTTGTAATTCAAATGCGTTG+TGG | - | chr5.1:72476779-72476798 | MS.gene017069:CDS | 35.0% | |
CTTTCTTCCTTATCTTTGTC+TGG | - | chr5.1:72478982-72479001 | MS.gene017069:CDS | 35.0% | |
GAAAGTAAAGACTAGAGAGA+TGG | + | chr5.1:72479074-72479093 | None:intergenic | 35.0% | |
GACGATTGAATTGTTTGTCT+AGG | + | chr5.1:72479156-72479175 | None:intergenic | 35.0% | |
GGGTGTAACTGAAATTTCAT+GGG | - | chr5.1:72476722-72476741 | MS.gene017069:intron | 35.0% | |
GGTGTAACTGAAATTTCATG+GGG | - | chr5.1:72476723-72476742 | MS.gene017069:intron | 35.0% | |
TATCCAATCAAAGCTAAGCT+TGG | + | chr5.1:72479512-72479531 | None:intergenic | 35.0% | |
TCATAGCATACCTGAATTCA+AGG | + | chr5.1:72476354-72476373 | None:intergenic | 35.0% | |
TCTTGAATCCTGATTCATTG+TGG | + | chr5.1:72481319-72481338 | None:intergenic | 35.0% | |
TGGCCAATGTTGTTAAATAG+CGG | - | chr5.1:72480416-72480435 | MS.gene017069:intron | 35.0% | |
TGGGAAAATGGAATACAAGT+AGG | - | chr5.1:72477086-72477105 | MS.gene017069:intron | 35.0% | |
TGGGTGTAACTGAAATTTCA+TGG | - | chr5.1:72476721-72476740 | MS.gene017069:intron | 35.0% | |
TTCCTTATCTTTGTCTGGTT+TGG | - | chr5.1:72478987-72479006 | MS.gene017069:CDS | 35.0% | |
TTCGAGAATAAGGAAGTGAA+GGG | - | chr5.1:72479869-72479888 | MS.gene017069:intron | 35.0% | |
TTTCGAGAATAAGGAAGTGA+AGG | - | chr5.1:72479868-72479887 | MS.gene017069:intron | 35.0% | |
! | AACGGTTCAATTTTTCCCTT+CGG | - | chr5.1:72479763-72479782 | MS.gene017069:intron | 35.0% |
! | AGCTACATTGTTGTTGATTG+TGG | + | chr5.1:72480594-72480613 | None:intergenic | 35.0% |
! | ATTCCATTTTCCCAGTTGTT+GGG | + | chr5.1:72477080-72477099 | None:intergenic | 35.0% |
! | CTGTGAATTTCAAGTAAGCA+TGG | - | chr5.1:72477282-72477301 | MS.gene017069:intron | 35.0% |
! | GATTTGTTCAAATTCCGCTA+CGG | + | chr5.1:72480466-72480485 | None:intergenic | 35.0% |
! | GGGAATGGTTCTACAAAATT+AGG | - | chr5.1:72478622-72478641 | MS.gene017069:intron | 35.0% |
! | GTTCTCTTGTTTCGAGAATA+AGG | - | chr5.1:72479859-72479878 | MS.gene017069:intron | 35.0% |
! | TATTCCATTTTCCCAGTTGT+TGG | + | chr5.1:72477081-72477100 | None:intergenic | 35.0% |
! | TGCTAAAAGCACAACTTCAA+AGG | - | chr5.1:72480946-72480965 | MS.gene017069:intron | 35.0% |
!! | AGGGAAAAAAAAAGTGTCAC+TGG | - | chr5.1:72479888-72479907 | MS.gene017069:intron | 35.0% |
!! | GGGAAAAAAAAAGTGTCACT+GGG | - | chr5.1:72479889-72479908 | MS.gene017069:intron | 35.0% |
!! | TATCCAAGCTTAGCTTTGAT+TGG | - | chr5.1:72479506-72479525 | MS.gene017069:intron | 35.0% |
!!! | GTTATTTTTCTTCTGCACCT+TGG | + | chr5.1:72476438-72476457 | None:intergenic | 35.0% |
!!! | TATTTTTTTGGTGACAGCTG+AGG | - | chr5.1:72477025-72477044 | MS.gene017069:CDS | 35.0% |
AAAAACAAGGCGAGGAAAGT+CGG | + | chr5.1:72477673-72477692 | None:intergenic | 40.0% | |
AAATATGTGGCGTACTGAAC+TGG | - | chr5.1:72480761-72480780 | MS.gene017069:intron | 40.0% | |
AACAAACCAGCGATACAAAG+GGG | + | chr5.1:72479807-72479826 | None:intergenic | 40.0% | |
AACTCCGTTAGGTTCCTAAA+AGG | - | chr5.1:72477807-72477826 | MS.gene017069:intron | 40.0% | |
AACTGGATTCAGCCATAATG+TGG | + | chr5.1:72479654-72479673 | None:intergenic | 40.0% | |
AAGAAATGAGCCAACTGTCA+AGG | - | chr5.1:72477217-72477236 | MS.gene017069:intron | 40.0% | |
AAGAGTTTGATCCTTGTTCG+TGG | + | chr5.1:72481911-72481930 | None:intergenic | 40.0% | |
AAGTTGACAAAAAACGTGGC+AGG | - | chr5.1:72481206-72481225 | MS.gene017069:intron | 40.0% | |
AATATGTGGCGTACTGAACT+GGG | - | chr5.1:72480762-72480781 | MS.gene017069:intron | 40.0% | |
AGAAATGAGCCAACTGTCAA+GGG | - | chr5.1:72477218-72477237 | MS.gene017069:intron | 40.0% | |
AGAAGCAACTGTAGTAAGAG+CGG | - | chr5.1:72480812-72480831 | MS.gene017069:intron | 40.0% | |
AGAATTGTTCCCTTGACAGT+TGG | + | chr5.1:72477230-72477249 | None:intergenic | 40.0% | |
ATCAATCATCACCACGAACA+AGG | - | chr5.1:72481897-72481916 | MS.gene017069:CDS | 40.0% | |
ATCCATTCTAAGTGCAACCA+AGG | - | chr5.1:72476418-72476437 | MS.gene017069:intron | 40.0% | |
ATGCAGCATCCATCATACTT+CGG | + | chr5.1:72477435-72477454 | None:intergenic | 40.0% | |
ATGCCAAATAGGACTACTGA+TGG | - | chr5.1:72478748-72478767 | MS.gene017069:intron | 40.0% | |
ATGTGAACTACATTCTCTGC+AGG | + | chr5.1:72481723-72481742 | None:intergenic | 40.0% | |
ATTGACTGGAGGTTTAAGAG+AGG | - | chr5.1:72479179-72479198 | MS.gene017069:intron | 40.0% | |
CAACAAACCAGCGATACAAA+GGG | + | chr5.1:72479808-72479827 | None:intergenic | 40.0% | |
CAATGCATCGAATTGAACAG+TGG | - | chr5.1:72479616-72479635 | MS.gene017069:intron | 40.0% | |
CAATGCTGAAGCTAGGATAA+AGG | - | chr5.1:72480860-72480879 | MS.gene017069:intron | 40.0% | |
CATAAGCTAGGTAACATTCG+AGG | + | chr5.1:72476993-72477012 | None:intergenic | 40.0% | |
CTCTTGGAATGATGCCAAAT+AGG | - | chr5.1:72478737-72478756 | MS.gene017069:intron | 40.0% | |
CTTAATGAATGAAAAGGGGC+CGG | - | chr5.1:72479247-72479266 | MS.gene017069:intron | 40.0% | |
CTTTATCCTAGCTTCAGCAT+TGG | + | chr5.1:72480862-72480881 | None:intergenic | 40.0% | |
GAAGCTGTGAATTCCTTAAG+TGG | - | chr5.1:72478601-72478620 | MS.gene017069:intron | 40.0% | |
GAAGGATTATTTCCTATGCG+CGG | - | chr5.1:72477591-72477610 | MS.gene017069:CDS | 40.0% | |
GAATGCAGAAGAAGATGAAG+AGG | - | chr5.1:72476646-72476665 | MS.gene017069:intron | 40.0% | |
GAGGAAGGAAAAATGCTTTG+TGG | + | chr5.1:72478047-72478066 | None:intergenic | 40.0% | |
GCTAAACTATGGTATTCAGC+GGG | + | chr5.1:72478380-72478399 | None:intergenic | 40.0% | |
GGATGAGGAGCTACAAAATT+TGG | - | chr5.1:72480136-72480155 | MS.gene017069:CDS | 40.0% | |
GGTGATTCATCAGAGTGAAT+TGG | - | chr5.1:72481247-72481266 | MS.gene017069:intron | 40.0% | |
GTAAACAACATTCAGCCAGT+TGG | - | chr5.1:72481756-72481775 | MS.gene017069:intron | 40.0% | |
GTCCAAACCAGACAAAGATA+AGG | + | chr5.1:72478992-72479011 | None:intergenic | 40.0% | |
GTGAATTCCTTAAGTGGGAA+TGG | - | chr5.1:72478607-72478626 | MS.gene017069:intron | 40.0% | |
TATACAGTCTCAGGTCTACA+TGG | - | chr5.1:72479272-72479291 | MS.gene017069:intron | 40.0% | |
TCTGGTAGAAATCTGTTGCA+GGG | - | chr5.1:72475861-72475880 | MS.gene017069:CDS | 40.0% | |
TGACTGCTTAGTTGTTTGGT+AGG | - | chr5.1:72477850-72477869 | MS.gene017069:intron | 40.0% | |
TGATCCCACTGAAGAAAATG+TGG | - | chr5.1:72481659-72481678 | MS.gene017069:intron | 40.0% | |
TGCAGAGAATGTAGTTCACA+TGG | - | chr5.1:72481722-72481741 | MS.gene017069:intron | 40.0% | |
TGTAGAACCATTCCCACTTA+AGG | + | chr5.1:72478617-72478636 | None:intergenic | 40.0% | |
TGTATGCCAGCTATGAAATG+TGG | - | chr5.1:72481522-72481541 | MS.gene017069:intron | 40.0% | |
TGTGAACTACATTCTCTGCA+GGG | + | chr5.1:72481722-72481741 | None:intergenic | 40.0% | |
TTCTGGTAGAAATCTGTTGC+AGG | - | chr5.1:72475860-72475879 | MS.gene017069:CDS | 40.0% | |
TTGGTAGGAGAGGAAACATA+TGG | - | chr5.1:72477865-72477884 | MS.gene017069:intron | 40.0% | |
! | AAAAGATTCTGAGAAGCAGC+AGG | - | chr5.1:72480307-72480326 | MS.gene017069:intron | 40.0% |
! | AAAATTTGGCTCGAGACCTT+CGG | - | chr5.1:72480150-72480169 | MS.gene017069:intron | 40.0% |
! | AGATTGAAACACGGTACTGA+AGG | + | chr5.1:72478898-72478917 | None:intergenic | 40.0% |
! | AGCATCTGCTGCTTATACTA+TGG | - | chr5.1:72480241-72480260 | MS.gene017069:intron | 40.0% |
! | CCAAGGCACCAAGTAAAATA+GGG | + | chr5.1:72477327-72477346 | None:intergenic | 40.0% |
! | GATTGAAACACGGTACTGAA+GGG | + | chr5.1:72478897-72478916 | None:intergenic | 40.0% |
! | TAGGAACCTAACGGAGTTTT+TGG | + | chr5.1:72477805-72477824 | None:intergenic | 40.0% |
!! | ATGAAGGTACACCCTCATTT+TGG | - | chr5.1:72478793-72478812 | MS.gene017069:intron | 40.0% |
!! | CTACAAACTCTAAAGCCGAA+GGG | + | chr5.1:72479781-72479800 | None:intergenic | 40.0% |
!! | GGTTTGCTCTAGAAACACTT+AGG | + | chr5.1:72481695-72481714 | None:intergenic | 40.0% |
!! | TCTACAAACTCTAAAGCCGA+AGG | + | chr5.1:72479782-72479801 | None:intergenic | 40.0% |
!! | TTCGGCTTTAGAGTTTGTAG+AGG | - | chr5.1:72479781-72479800 | MS.gene017069:intron | 40.0% |
!!! | AGCTTTTAGAACCAACTGAG+TGG | + | chr5.1:72478575-72478594 | None:intergenic | 40.0% |
!!! | CCTATTTTACTTGGTGCCTT+GGG | - | chr5.1:72477325-72477344 | MS.gene017069:intron | 40.0% |
AAAACAAGGCGAGGAAAGTC+GGG | + | chr5.1:72477672-72477691 | None:intergenic | 45.0% | |
AAGCAGCTTGGATATTCCAG+TGG | - | chr5.1:72481860-72481879 | MS.gene017069:CDS | 45.0% | |
AAGCTGCTTCCATCAGTTTC+TGG | + | chr5.1:72481849-72481868 | None:intergenic | 45.0% | |
AATAGCAGCATCTCTCTGGT+CGG | + | chr5.1:72480733-72480752 | None:intergenic | 45.0% | |
ACTACATTCTCTGCAGGGAT+AGG | + | chr5.1:72481717-72481736 | None:intergenic | 45.0% | |
AGAAACTGATGGAAGCAGCT+TGG | - | chr5.1:72481848-72481867 | MS.gene017069:CDS | 45.0% | |
AGACCTGAGACTGTATATGC+CGG | + | chr5.1:72479269-72479288 | None:intergenic | 45.0% | |
AGCTGTACAGAGAGAATCAG+TGG | - | chr5.1:72480884-72480903 | MS.gene017069:intron | 45.0% | |
AGGATCGACCACAATGAATC+AGG | - | chr5.1:72481308-72481327 | MS.gene017069:intron | 45.0% | |
AGGCTACACCAAAGGATAGA+TGG | - | chr5.1:72481226-72481245 | MS.gene017069:intron | 45.0% | |
AGGGATGTAGATCGGTATCT+TGG | - | chr5.1:72480038-72480057 | MS.gene017069:intron | 45.0% | |
AGGTCTACATGGTATCAGCT+AGG | - | chr5.1:72479283-72479302 | MS.gene017069:intron | 45.0% | |
AGTGGCAACAAAAGAGAAGC+AGG | - | chr5.1:72480902-72480921 | MS.gene017069:intron | 45.0% | |
ATATTCAGGCTACAGAGGCA+AGG | - | chr5.1:72481796-72481815 | MS.gene017069:intron | 45.0% | |
ATCGAATTGAACAGTGGCTG+TGG | - | chr5.1:72479622-72479641 | MS.gene017069:intron | 45.0% | |
ATCGGTATCTTGGGCCTTTA+TGG | - | chr5.1:72480048-72480067 | MS.gene017069:intron | 45.0% | |
ATTGTGGGGCTTGAATCTAG+TGG | - | chr5.1:72479934-72479953 | MS.gene017069:intron | 45.0% | |
CAACGAATGGAGCGATATTC+AGG | - | chr5.1:72481782-72481801 | MS.gene017069:intron | 45.0% | |
CACCTTGGTTGCACTTAGAA+TGG | + | chr5.1:72476423-72476442 | None:intergenic | 45.0% | |
CCAACAAACCAGCGATACAA+AGG | + | chr5.1:72479809-72479828 | None:intergenic | 45.0% | |
CCAGAGAGATGCTGCTATTA+AGG | - | chr5.1:72480734-72480753 | MS.gene017069:intron | 45.0% | |
CCTTAATAGCAGCATCTCTC+TGG | + | chr5.1:72480737-72480756 | None:intergenic | 45.0% | |
CGAAAAACTCCTCCGTCATT+TGG | + | chr5.1:72478088-72478107 | None:intergenic | 45.0% | |
CTACATTCTCTGCAGGGATA+GGG | + | chr5.1:72481716-72481735 | None:intergenic | 45.0% | |
CTCTGACCTTCATACACTTC+TGG | - | chr5.1:72479831-72479850 | MS.gene017069:intron | 45.0% | |
CTTGAGCCAAAAACTCCGTT+AGG | - | chr5.1:72477796-72477815 | MS.gene017069:intron | 45.0% | |
GAGAGATGCTGCTATTAAGG+AGG | - | chr5.1:72480737-72480756 | MS.gene017069:intron | 45.0% | |
GAGGAAATGGAACGAACGTT+GGG | - | chr5.1:72477044-72477063 | MS.gene017069:intron | 45.0% | |
GATGCTCCACATTTCATAGC+TGG | + | chr5.1:72481531-72481550 | None:intergenic | 45.0% | |
GCTTAGTTGTTTGGTAGGAG+AGG | - | chr5.1:72477855-72477874 | MS.gene017069:intron | 45.0% | |
GGACCATCAGTAGTCCTATT+TGG | + | chr5.1:72478754-72478773 | None:intergenic | 45.0% | |
GGACTTGATCGTAGTGTATC+AGG | - | chr5.1:72481268-72481287 | MS.gene017069:intron | 45.0% | |
GGGATGTAGATCGGTATCTT+GGG | - | chr5.1:72480039-72480058 | MS.gene017069:intron | 45.0% | |
GGTGTCCCGATATCTAAATG+AGG | + | chr5.1:72477565-72477584 | None:intergenic | 45.0% | |
GGTTTAAGAGAGGCAAGGAT+AGG | - | chr5.1:72479189-72479208 | MS.gene017069:intron | 45.0% | |
GTCTCGGATCTCTTAAGAAG+TGG | + | chr5.1:72475888-72475907 | None:intergenic | 45.0% | |
TAGGACTACTGATGGTCCTA+TGG | - | chr5.1:72478756-72478775 | MS.gene017069:intron | 45.0% | |
TCACGTACGCTGCCAAATTT+AGG | - | chr5.1:72476554-72476573 | MS.gene017069:intron | 45.0% | |
TGAGGAAATGGAACGAACGT+TGG | - | chr5.1:72477043-72477062 | MS.gene017069:intron | 45.0% | |
TGATCTTGGACCCAACAACT+GGG | - | chr5.1:72477067-72477086 | MS.gene017069:intron | 45.0% | |
TGCAGAAGAAGATGAAGAGG+AGG | - | chr5.1:72476649-72476668 | MS.gene017069:intron | 45.0% | |
TGTAGTAAGAGCGGAAGAGA+AGG | - | chr5.1:72480821-72480840 | MS.gene017069:intron | 45.0% | |
TGTGTGACAAAGGGCAACTT+TGG | + | chr5.1:72476160-72476179 | None:intergenic | 45.0% | |
TGTTACGGAACGCCAAATGA+CGG | - | chr5.1:72478073-72478092 | MS.gene017069:intron | 45.0% | |
TGTTTCGGATGAATGACCCT+TGG | - | chr5.1:72480396-72480415 | MS.gene017069:intron | 45.0% | |
! | AAATTTGGCTCGAGACCTTC+GGG | - | chr5.1:72480151-72480170 | MS.gene017069:intron | 45.0% |
! | AGCTTTCATGATGGTGATGC+AGG | - | chr5.1:72478850-72478869 | MS.gene017069:intron | 45.0% |
! | CAATCGTCTTCATTGACTGG+AGG | - | chr5.1:72479168-72479187 | MS.gene017069:intron | 45.0% |
! | CCCAAGGCACCAAGTAAAAT+AGG | + | chr5.1:72477328-72477347 | None:intergenic | 45.0% |
! | CGCAAACCAGAAGTGTATGA+AGG | + | chr5.1:72479840-72479859 | None:intergenic | 45.0% |
! | CGGCCCCTTTTCATTCATTA+AGG | + | chr5.1:72479249-72479268 | None:intergenic | 45.0% |
! | CTGGCTGAATGTTGTTTACC+TGG | + | chr5.1:72481755-72481774 | None:intergenic | 45.0% |
! | GCTTTCATGATGGTGATGCA+GGG | - | chr5.1:72478851-72478870 | MS.gene017069:intron | 45.0% |
! | TCGTGGTGATGATTGATACC+TGG | + | chr5.1:72481894-72481913 | None:intergenic | 45.0% |
! | TTTGGTGACAGCTGAGGAAA+TGG | - | chr5.1:72477031-72477050 | MS.gene017069:CDS | 45.0% |
!! | ATGAAGCACCGACACAAACA+GGG | + | chr5.1:72476897-72476916 | None:intergenic | 45.0% |
!! | CCTTTGTATCGCTGGTTTGT+TGG | - | chr5.1:72479806-72479825 | MS.gene017069:intron | 45.0% |
!! | TATGAAGCACCGACACAAAC+AGG | + | chr5.1:72476898-72476917 | None:intergenic | 45.0% |
!! | TTGTCTGGTTTGGACTTTGC+TGG | - | chr5.1:72478997-72479016 | MS.gene017069:CDS | 45.0% |
!!! | CCCTATTTTACTTGGTGCCT+TGG | - | chr5.1:72477324-72477343 | MS.gene017069:intron | 45.0% |
!!! | TTTATATTTTTATAATTTTC+GGG | - | chr5.1:72477476-72477495 | MS.gene017069:CDS | 5.0% |
AAACAAGGCGAGGAAAGTCG+GGG | + | chr5.1:72477671-72477690 | None:intergenic | 50.0% | |
AAGAGCGGAAGAGAAGGTCA+GGG | - | chr5.1:72480827-72480846 | MS.gene017069:intron | 50.0% | |
ACATTCCGAGGCTGTTGAGT+TGG | + | chr5.1:72478674-72478693 | None:intergenic | 50.0% | |
AGGCAAGGATAGCCGATGTA+AGG | - | chr5.1:72481811-72481830 | MS.gene017069:intron | 50.0% | |
AGTTCACATGGCAACAGACC+AGG | - | chr5.1:72481734-72481753 | MS.gene017069:intron | 50.0% | |
ATTGAACAGTGGCTGTGGCA+AGG | - | chr5.1:72479627-72479646 | MS.gene017069:intron | 50.0% | |
CAACTTCAAAGGTCAGCGTC+TGG | - | chr5.1:72480957-72480976 | MS.gene017069:intron | 50.0% | |
CTCCATTCGTTGTCACCAAC+TGG | + | chr5.1:72481774-72481793 | None:intergenic | 50.0% | |
CTGGAGGTTTAAGAGAGGCA+AGG | - | chr5.1:72479184-72479203 | MS.gene017069:intron | 50.0% | |
CTGTGGCAAGGTCCACATTA+TGG | - | chr5.1:72479639-72479658 | MS.gene017069:intron | 50.0% | |
GAACGAACGTTGGGTGATCT+TGG | - | chr5.1:72477053-72477072 | MS.gene017069:intron | 50.0% | |
GAGCGATATTCAGGCTACAG+AGG | - | chr5.1:72481791-72481810 | MS.gene017069:intron | 50.0% | |
GCTATAGCGCTTTACCGTAG+CGG | - | chr5.1:72480449-72480468 | MS.gene017069:CDS | 50.0% | |
GGACCCAACAACTGGGAAAA+TGG | - | chr5.1:72477074-72477093 | MS.gene017069:intron | 50.0% | |
GGCAAGGATAGCCGATGTAA+GGG | - | chr5.1:72481812-72481831 | MS.gene017069:intron | 50.0% | |
GGGCTTGAATCTAGTGGCAA+AGG | - | chr5.1:72479940-72479959 | MS.gene017069:intron | 50.0% | |
GGTGATGATTGATACCTGGC+TGG | + | chr5.1:72481890-72481909 | None:intergenic | 50.0% | |
GTGATCTTGGACCCAACAAC+TGG | - | chr5.1:72477066-72477085 | MS.gene017069:intron | 50.0% | |
TAAGAGCGGAAGAGAAGGTC+AGG | - | chr5.1:72480826-72480845 | MS.gene017069:intron | 50.0% | |
TAGAACCAACTGAGTGGCAC+TGG | + | chr5.1:72478569-72478588 | None:intergenic | 50.0% | |
TAGTTGAATCACGTGCCCGA+AGG | + | chr5.1:72480169-72480188 | None:intergenic | 50.0% | |
TATCGGGACACCACAGAAGA+AGG | - | chr5.1:72477573-72477592 | MS.gene017069:CDS | 50.0% | |
TCCTTCCTCGCTCACTGTTA+CGG | - | chr5.1:72478058-72478077 | MS.gene017069:intron | 50.0% | |
TGCTGCGACTTCCCTTACAT+CGG | + | chr5.1:72481826-72481845 | None:intergenic | 50.0% | |
! | AGATTCTGAGAAGCAGCAGG+AGG | - | chr5.1:72480310-72480329 | MS.gene017069:intron | 50.0% |
!! | AGCCAGTTGGTGACAACGAA+TGG | - | chr5.1:72481769-72481788 | MS.gene017069:intron | 50.0% |
!! | AGTGGGCTACCGAAGTATGA+TGG | - | chr5.1:72477423-72477442 | MS.gene017069:CDS | 50.0% |
AACGTGGCAGGCTACACCAA+AGG | - | chr5.1:72481218-72481237 | MS.gene017069:intron | 55.0% | |
AGAGAAGGTCAGGGTTGCTG+AGG | - | chr5.1:72480836-72480855 | MS.gene017069:intron | 55.0% | |
CTGAGGCCAATGCTGAAGCT+AGG | - | chr5.1:72480853-72480872 | MS.gene017069:intron | 55.0% | |
GTCAGCGTCCCTGTTTGTGT+CGG | - | chr5.1:72476886-72476905 | MS.gene017069:CDS | 55.0% | |
GTCGCAGCACCAGAAACTGA+TGG | - | chr5.1:72481837-72481856 | MS.gene017069:CDS | 55.0% | |
TACGGAACGCCAAATGACGG+AGG | - | chr5.1:72478076-72478095 | MS.gene017069:intron | 55.0% | |
TAGAGGCCCCTTTGTATCGC+TGG | - | chr5.1:72479798-72479817 | MS.gene017069:intron | 55.0% | |
TCCGTAACAGTGAGCGAGGA+AGG | + | chr5.1:72478062-72478081 | None:intergenic | 55.0% | |
TGCAGCCAACTCAACAGCCT+CGG | - | chr5.1:72478666-72478685 | MS.gene017069:intron | 55.0% | |
! | ATACCTGGCTGGCTAACCAC+TGG | + | chr5.1:72481879-72481898 | None:intergenic | 55.0% |
! | ATTCCAGTGGTTAGCCAGCC+AGG | - | chr5.1:72481873-72481892 | MS.gene017069:CDS | 55.0% |
! | CGTCAGCTAGCTTCTGCTTC+TGG | - | chr5.1:72475843-72475862 | MS.gene017069:CDS | 55.0% |
! | GCAGGAGGTGTATGCACAGA+AGG | - | chr5.1:72480325-72480344 | MS.gene017069:intron | 55.0% |
! | TCACACCAGTGCCACTCAGT+TGG | - | chr5.1:72478561-72478580 | MS.gene017069:intron | 55.0% |
AGCAGCAGATGCTGCTGCCT+CGG | + | chr5.1:72480234-72480253 | None:intergenic | 60.0% | |
GCGTTCCGTAACAGTGAGCG+AGG | + | chr5.1:72478066-72478085 | None:intergenic | 60.0% | |
GGGCCGGCATATACAGTCTC+AGG | - | chr5.1:72479263-72479282 | MS.gene017069:intron | 60.0% | |
TCCTGGTGCAGCTCGAGCAT+GGG | - | chr5.1:72477618-72477637 | MS.gene017069:intron | 60.0% | |
TTCCTATGCGCGGAGACTCC+TGG | - | chr5.1:72477601-72477620 | MS.gene017069:intron | 60.0% | |
ACCCATGCTCGAGCTGCACC+AGG | + | chr5.1:72477622-72477641 | None:intergenic | 65.0% | |
AGCAGATGCTGCTGCCTCGG+CGG | + | chr5.1:72480231-72480250 | None:intergenic | 65.0% | |
CACCAGGAGTCTCCGCGCAT+AGG | + | chr5.1:72477606-72477625 | None:intergenic | 65.0% | |
CTCCTGGTGCAGCTCGAGCA+TGG | - | chr5.1:72477617-72477636 | MS.gene017069:intron | 65.0% | |
TGAGACTGCCGAAGCCGCCG+AGG | - | chr5.1:72480214-72480233 | MS.gene017069:intron | 70.0% | |
TGCTGCTGCCTCGGCGGCTT+CGG | + | chr5.1:72480225-72480244 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.1 | gene | 72475792 | 72481944 | 72475792 | ID=MS.gene017069 |
chr5.1 | mRNA | 72475792 | 72481944 | 72475792 | ID=MS.gene017069.t1;Parent=MS.gene017069 |
chr5.1 | exon | 72481828 | 72481944 | 72481828 | ID=MS.gene017069.t1.exon1;Parent=MS.gene017069.t1 |
chr5.1 | CDS | 72481828 | 72481944 | 72481828 | ID=cds.MS.gene017069.t1;Parent=MS.gene017069.t1 |
chr5.1 | exon | 72480633 | 72480694 | 72480633 | ID=MS.gene017069.t1.exon2;Parent=MS.gene017069.t1 |
chr5.1 | CDS | 72480633 | 72480694 | 72480633 | ID=cds.MS.gene017069.t1;Parent=MS.gene017069.t1 |
chr5.1 | exon | 72480442 | 72480525 | 72480442 | ID=MS.gene017069.t1.exon3;Parent=MS.gene017069.t1 |
chr5.1 | CDS | 72480442 | 72480525 | 72480442 | ID=cds.MS.gene017069.t1;Parent=MS.gene017069.t1 |
chr5.1 | exon | 72480280 | 72480311 | 72480280 | ID=MS.gene017069.t1.exon4;Parent=MS.gene017069.t1 |
chr5.1 | CDS | 72480280 | 72480311 | 72480280 | ID=cds.MS.gene017069.t1;Parent=MS.gene017069.t1 |
chr5.1 | exon | 72480083 | 72480164 | 72480083 | ID=MS.gene017069.t1.exon5;Parent=MS.gene017069.t1 |
chr5.1 | CDS | 72480083 | 72480164 | 72480083 | ID=cds.MS.gene017069.t1;Parent=MS.gene017069.t1 |
chr5.1 | exon | 72478938 | 72479166 | 72478938 | ID=MS.gene017069.t1.exon6;Parent=MS.gene017069.t1 |
chr5.1 | CDS | 72478938 | 72479166 | 72478938 | ID=cds.MS.gene017069.t1;Parent=MS.gene017069.t1 |
chr5.1 | exon | 72477390 | 72477617 | 72477390 | ID=MS.gene017069.t1.exon7;Parent=MS.gene017069.t1 |
chr5.1 | CDS | 72477390 | 72477617 | 72477390 | ID=cds.MS.gene017069.t1;Parent=MS.gene017069.t1 |
chr5.1 | exon | 72476769 | 72477061 | 72476769 | ID=MS.gene017069.t1.exon8;Parent=MS.gene017069.t1 |
chr5.1 | CDS | 72476769 | 72477061 | 72476769 | ID=cds.MS.gene017069.t1;Parent=MS.gene017069.t1 |
chr5.1 | exon | 72475792 | 72476140 | 72475792 | ID=MS.gene017069.t1.exon9;Parent=MS.gene017069.t1 |
chr5.1 | CDS | 72475792 | 72476140 | 72475792 | ID=cds.MS.gene017069.t1;Parent=MS.gene017069.t1 |
Gene Sequence |
Protein sequence |