AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene67709

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene67709.t1 MTR_5g022600 100.000 197 0 0 1 197 1 197 3.04e-147 407
MS.gene67709.t1 MTR_8g075240 97.462 197 5 0 1 197 1 197 1.39e-143 397
MS.gene67709.t1 MTR_4g073250 89.340 197 21 0 1 197 1 197 2.44e-133 372
MS.gene67709.t1 MTR_3g078260 77.835 194 42 1 2 194 4 197 1.79e-116 330
MS.gene67709.t1 MTR_2g090875 84.270 178 28 0 1 178 1 178 1.01e-115 327
MS.gene67709.t1 MTR_4g088055 84.831 178 27 0 1 178 1 178 6.46e-115 325
MS.gene67709.t1 MTR_6g087980 74.874 199 47 1 1 196 1 199 1.78e-111 317
MS.gene67709.t1 MTR_3g078260 86.555 119 16 0 2 120 4 122 4.03e-76 225
MS.gene67709.t1 MTR_7g103070 30.851 188 116 5 8 192 18 194 1.40e-25 98.6
MS.gene67709.t1 MTR_1g068740 31.383 188 116 6 6 191 15 191 9.67e-25 96.7
MS.gene67709.t1 MTR_1g068730 31.383 188 116 6 6 191 15 191 1.68e-24 95.9
MS.gene67709.t1 MTR_1g115325 32.386 176 106 6 6 179 15 179 2.05e-24 95.9
MS.gene67709.t1 MTR_7g100020 30.851 188 117 6 6 191 15 191 4.95e-24 94.7
MS.gene67709.t1 MTR_8g093740 30.726 179 109 5 6 181 13 179 3.38e-23 92.4
MS.gene67709.t1 MTR_3g096350 29.630 189 118 5 7 192 13 189 5.39e-23 91.7
MS.gene67709.t1 MTR_1g068730 34.109 129 82 3 6 132 15 142 1.08e-22 90.1
MS.gene67709.t1 MTR_1g094220 31.461 178 105 7 7 180 32 196 1.12e-22 90.9
MS.gene67709.t1 MTR_1g062760 30.899 178 108 5 7 181 15 180 1.84e-22 90.5
MS.gene67709.t1 MTR_8g031870 30.814 172 105 5 1 170 1 160 2.21e-22 89.7
MS.gene67709.t1 MTR_1g094220 32.544 169 97 7 7 171 32 187 3.57e-22 89.7
MS.gene67709.t1 MTR_8g006970 33.136 169 99 6 6 172 8 164 4.57e-22 88.6
MS.gene67709.t1 MTR_8g006970 33.516 182 102 8 6 180 22 191 4.70e-22 89.7
MS.gene67709.t1 MTR_1g094220 32.544 169 97 7 7 171 32 187 5.18e-22 89.4
MS.gene67709.t1 MTR_1g068740 33.333 141 86 4 6 139 15 154 6.16e-22 89.0
MS.gene67709.t1 MTR_1g029450 30.726 179 109 5 6 181 17 183 6.39e-22 89.4
MS.gene67709.t1 MTR_4g063160 32.022 178 106 7 6 179 15 181 9.43e-22 88.6
MS.gene67709.t1 MTR_1g094220 32.164 171 99 7 7 173 32 189 1.04e-21 89.0
MS.gene67709.t1 MTR_8g103550 31.111 180 109 6 8 184 11 178 1.81e-21 87.4
MS.gene67709.t1 MTR_7g081700 31.016 187 110 7 6 185 8 182 1.96e-21 87.4
MS.gene67709.t1 MTR_4g098950 32.727 165 97 5 8 170 11 163 2.63e-21 87.4
MS.gene67709.t1 MTR_2g005500 30.857 175 104 6 1 170 1 163 3.57e-21 87.0
MS.gene67709.t1 MTR_3g064390 32.961 179 105 5 8 183 12 178 1.15e-20 85.5
MS.gene67709.t1 MTR_2g083860 29.282 181 114 5 6 184 13 181 1.29e-20 85.9
MS.gene67709.t1 MTR_8g031830 30.409 171 105 5 1 169 1 159 1.87e-20 85.1
MS.gene67709.t1 MTR_5g013900 32.727 165 97 5 8 170 11 163 2.53e-20 84.7
MS.gene67709.t1 MTR_2g096550 29.891 184 114 6 6 185 15 187 3.27e-20 84.7
MS.gene67709.t1 MTR_8g027220 38.655 119 70 3 8 124 28 145 3.44e-20 85.1
MS.gene67709.t1 MTR_6g021790 27.624 181 117 5 1 179 1 169 3.49e-20 84.3
MS.gene67709.t1 MTR_8g031660 29.651 172 107 5 1 170 1 160 4.41e-20 84.3
MS.gene67709.t1 MTR_2g027660 27.907 172 110 5 1 170 1 160 4.94e-20 84.0
MS.gene67709.t1 MTR_8g031680 28.488 172 109 5 1 170 1 160 9.29e-20 83.2
MS.gene67709.t1 MTR_2g102060 30.909 165 100 5 8 170 12 164 1.82e-19 82.4
MS.gene67709.t1 MTR_7g117910 36.364 121 74 3 8 126 22 141 2.31e-19 82.4
MS.gene67709.t1 MTR_5g076590 31.515 165 99 4 8 170 12 164 2.91e-19 81.6
MS.gene67709.t1 MTR_4g079350 35.606 132 82 3 6 135 13 143 4.90e-19 81.6
MS.gene67709.t1 MTR_1g097420 30.729 192 116 7 1 184 1 183 5.37e-19 81.3
MS.gene67709.t1 MTR_3g087160 30.909 165 100 4 8 170 11 163 5.72e-19 81.3
MS.gene67709.t1 MTR_4g088090 29.834 181 113 5 6 184 13 181 5.92e-19 81.3
MS.gene67709.t1 MTR_2g005510 30.994 171 104 5 6 174 15 173 6.25e-19 81.3
MS.gene67709.t1 MTR_3g069510 29.834 181 113 5 6 184 12 180 7.01e-19 81.3
MS.gene67709.t1 MTR_2g075950 35.833 120 74 3 6 123 13 131 7.37e-19 81.3
MS.gene67709.t1 MTR_1g052475 32.530 166 98 5 7 170 16 169 7.97e-19 81.3
MS.gene67709.t1 MTR_8g090215 31.515 165 99 5 8 170 11 163 8.42e-19 80.9
MS.gene67709.t1 MTR_2g014990 35.833 120 74 3 6 123 13 131 1.35e-18 80.5
MS.gene67709.t1 MTR_1g090717 28.804 184 116 5 7 186 16 188 1.68e-18 80.1
MS.gene67709.t1 MTR_7g051940 28.947 190 121 5 6 193 13 190 2.17e-18 79.7
MS.gene67709.t1 MTR_0262s0050 31.928 166 99 6 7 170 16 169 3.40e-18 79.3
MS.gene67709.t1 MTR_3g064390 36.066 122 75 3 8 127 12 132 4.94e-18 77.4
MS.gene67709.t1 MTR_8g089985 31.515 165 99 5 8 170 19 171 8.67e-18 78.6
MS.gene67709.t1 MTR_2g101890 29.032 186 117 6 6 185 10 186 1.77e-17 77.4
MS.gene67709.t1 MTR_7g405790 28.947 190 121 5 6 193 15 192 1.96e-17 77.4
MS.gene67709.t1 MTR_3g096350 34.746 118 73 3 7 121 13 129 2.33e-17 75.9
MS.gene67709.t1 MTR_3g096350 34.746 118 73 3 7 121 13 129 2.39e-17 75.5
MS.gene67709.t1 MTR_4g069850 27.957 186 119 5 6 185 8 184 3.40e-17 76.6
MS.gene67709.t1 MTR_3g086980 31.325 166 98 6 8 170 18 170 3.90e-17 76.6
MS.gene67709.t1 MTR_8g107070 35.294 119 74 3 6 122 14 131 5.20e-17 77.0
MS.gene67709.t1 MTR_4g064897 29.341 167 104 5 6 170 12 166 7.60e-17 75.9
MS.gene67709.t1 MTR_1g078200 30.114 176 105 6 6 177 14 175 7.90e-17 75.9
MS.gene67709.t1 MTR_8g036220 31.138 167 101 6 6 170 16 170 8.06e-17 75.9
MS.gene67709.t1 MTR_4g012940 28.497 193 121 7 1 185 1 184 1.14e-16 75.1
MS.gene67709.t1 MTR_2g090865 36.667 120 73 3 6 123 11 129 2.23e-16 74.3
MS.gene67709.t1 MTR_8g092020 28.235 170 109 3 6 170 12 173 3.31e-16 73.9
MS.gene67709.t1 MTR_8g093740 28.395 162 92 4 22 181 7 146 8.87e-16 72.0
MS.gene67709.t1 MTR_6g079550 33.065 124 80 3 6 127 12 134 1.24e-15 72.4
MS.gene67709.t1 MTR_7g103070 29.927 137 83 4 47 181 2 127 2.01e-15 70.9
MS.gene67709.t1 MTR_1g097420 30.460 174 106 6 17 184 46 210 2.02e-15 72.4
MS.gene67709.t1 MTR_7g094810 28.877 187 99 4 7 180 9 174 5.75e-15 72.8
MS.gene67709.t1 MTR_7g094810 28.877 187 99 4 7 180 9 174 5.99e-15 72.8
MS.gene67709.t1 MTR_7g094810 28.877 187 99 4 7 180 9 174 6.00e-15 72.8
MS.gene67709.t1 MTR_7g094810 28.877 187 99 4 7 180 9 174 6.50e-15 72.8
MS.gene67709.t1 MTR_7g094810 28.877 187 99 4 7 180 9 174 7.01e-15 72.4
MS.gene67709.t1 MTR_3g107717 28.485 165 103 4 7 170 14 164 8.94e-14 67.4
MS.gene67709.t1 MTR_3g107707 28.485 165 103 4 7 170 14 164 9.22e-14 67.4
MS.gene67709.t1 MTR_3g107713 28.485 165 103 4 7 170 14 164 1.03e-13 67.4
MS.gene67709.t1 MTR_1g072280 27.604 192 95 6 7 180 13 178 1.08e-13 69.3
MS.gene67709.t1 MTR_4g099470 30.137 146 88 5 29 172 7 140 1.69e-13 65.9
MS.gene67709.t1 MTR_1g082870 28.571 175 115 4 7 180 17 182 1.08e-12 66.2
MS.gene67709.t1 MTR_4g113620 27.966 118 76 3 7 124 14 122 4.73e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene67709.t1 AT2G17800 95.431 197 9 0 1 197 1 197 7.79e-128 358
MS.gene67709.t1 AT2G17800 95.431 197 9 0 1 197 1 197 7.79e-128 358
MS.gene67709.t1 AT3G51300 95.431 197 9 0 1 197 1 197 1.35e-127 357
MS.gene67709.t1 AT4G35950 95.939 197 8 0 1 197 1 197 1.36e-127 357
MS.gene67709.t1 AT4G35020 87.374 198 24 1 1 197 1 198 2.24e-124 349
MS.gene67709.t1 AT4G35020 87.374 198 24 1 1 197 1 198 2.24e-124 349
MS.gene67709.t1 AT4G35020 87.374 198 24 1 1 197 1 198 2.24e-124 349
MS.gene67709.t1 AT1G75840 91.573 178 15 0 1 178 1 178 5.14e-122 343
MS.gene67709.t1 AT1G20090 90.341 176 17 0 3 178 2 177 2.97e-119 336
MS.gene67709.t1 AT5G45970 86.034 179 25 0 1 179 1 179 1.64e-117 332
MS.gene67709.t1 AT4G28950 75.500 200 43 2 1 196 1 198 2.53e-111 317
MS.gene67709.t1 AT5G62880 80.447 179 35 0 2 180 4 182 8.35e-111 315
MS.gene67709.t1 AT3G48040 80.447 179 35 0 2 180 4 182 8.60e-110 313
MS.gene67709.t1 AT2G44690 75.000 192 48 0 6 197 18 209 2.30e-106 304
MS.gene67709.t1 AT5G62880 79.070 172 32 1 2 173 4 171 5.06e-103 295
MS.gene67709.t1 AT3G48040 80.368 163 32 0 2 164 4 166 4.15e-100 287
MS.gene67709.t1 AT3G51290 95.122 164 8 0 34 197 635 798 1.70e-96 297
MS.gene67709.t1 AT4G35020 92.500 120 9 0 1 120 1 120 9.44e-82 239
MS.gene67709.t1 AT4G35020 92.500 120 9 0 1 120 1 120 9.44e-82 239
MS.gene67709.t1 AT3G46060 32.386 176 106 6 6 179 15 179 7.75e-24 94.4
MS.gene67709.t1 AT3G46060 32.386 176 106 6 6 179 15 179 7.75e-24 94.4
MS.gene67709.t1 AT3G46060 32.386 176 106 6 6 179 15 179 7.75e-24 94.4
MS.gene67709.t1 AT3G54840 33.333 168 97 6 7 171 34 189 8.64e-24 93.6
MS.gene67709.t1 AT3G54840 32.143 168 99 5 7 171 34 189 9.26e-24 93.6
MS.gene67709.t1 AT3G54840 31.928 166 98 5 9 171 2 155 3.52e-23 91.3
MS.gene67709.t1 AT1G02130 32.544 169 100 6 6 172 8 164 8.23e-23 91.3
MS.gene67709.t1 AT3G53610 31.737 167 101 6 6 170 15 170 1.01e-22 91.3
MS.gene67709.t1 AT3G53610 31.737 167 101 6 6 170 15 170 1.01e-22 91.3
MS.gene67709.t1 AT3G53610 31.737 167 101 6 6 170 15 170 1.01e-22 91.3
MS.gene67709.t1 AT5G45130 33.333 165 96 4 8 170 12 164 1.07e-22 90.9
MS.gene67709.t1 AT5G59840 31.737 167 101 5 6 170 15 170 1.39e-22 90.9
MS.gene67709.t1 AT4G19640 33.333 165 96 4 8 170 12 164 2.42e-22 90.1
MS.gene67709.t1 AT1G43890 30.168 179 110 5 6 181 13 179 2.43e-22 90.1
MS.gene67709.t1 AT1G43890 30.168 179 110 5 6 181 13 179 2.43e-22 90.1
MS.gene67709.t1 AT1G43890 30.168 179 110 5 6 181 13 179 2.43e-22 90.1
MS.gene67709.t1 AT1G16920 32.418 182 109 6 6 185 13 182 2.91e-22 90.1
MS.gene67709.t1 AT5G45130 33.129 163 95 4 10 170 22 172 5.42e-22 89.4
MS.gene67709.t1 AT1G73640 32.984 191 110 6 6 190 13 191 1.92e-21 88.6
MS.gene67709.t1 AT2G44610 33.333 165 96 5 8 170 11 163 2.21e-21 87.8
MS.gene67709.t1 AT5G03530 28.191 188 120 5 8 192 15 190 2.33e-21 87.8
MS.gene67709.t1 AT5G03530 28.191 188 120 5 8 192 15 190 2.33e-21 87.8
MS.gene67709.t1 AT4G18430 32.597 181 108 5 6 184 13 181 4.00e-21 87.0
MS.gene67709.t1 AT4G35860 27.624 181 117 5 1 179 1 169 1.08e-20 85.9
MS.gene67709.t1 AT4G17530 31.016 187 110 7 6 185 8 182 1.74e-20 85.1
MS.gene67709.t1 AT4G39890 34.731 167 92 6 8 170 11 164 1.77e-20 85.5
MS.gene67709.t1 AT5G47200 31.319 182 106 7 6 180 8 177 2.95e-20 84.7
MS.gene67709.t1 AT3G11730 29.940 167 103 5 6 170 8 162 3.28e-20 84.3
MS.gene67709.t1 AT2G22290 33.333 165 96 5 8 170 11 163 3.48e-20 84.3
MS.gene67709.t1 AT1G06400 32.335 167 99 5 6 170 13 167 6.54e-20 84.0
MS.gene67709.t1 AT4G19640 36.885 122 74 3 8 127 12 132 8.66e-20 82.0
MS.gene67709.t1 AT4G18800 36.667 120 73 3 6 123 13 131 9.28e-20 83.6
MS.gene67709.t1 AT1G09630 31.492 181 110 5 6 184 12 180 9.33e-20 83.6
MS.gene67709.t1 AT3G15060 31.285 179 109 5 8 184 15 181 1.61e-19 82.8
MS.gene67709.t1 AT4G17170 27.326 172 111 5 1 170 1 160 2.11e-19 82.4
MS.gene67709.t1 AT4G19640 34.074 135 86 3 8 140 12 145 2.61e-19 82.0
MS.gene67709.t1 AT2G31680 29.670 182 114 4 6 185 12 181 2.67e-19 82.4
MS.gene67709.t1 AT3G09900 32.934 167 99 6 6 170 15 170 3.20e-19 82.0
MS.gene67709.t1 AT3G07410 30.526 190 118 5 6 193 12 189 3.21e-19 82.0
MS.gene67709.t1 AT4G17160 26.744 172 112 5 1 170 1 160 3.59e-19 81.6
MS.gene67709.t1 AT1G18200 30.387 181 112 6 6 184 13 181 5.58e-19 81.6
MS.gene67709.t1 AT5G60860 30.387 181 112 5 6 184 13 181 5.70e-19 81.6
MS.gene67709.t1 AT2G43130 29.121 182 115 5 6 185 12 181 5.73e-19 81.3
MS.gene67709.t1 AT3G12160 32.530 166 98 5 7 170 16 169 5.75e-19 81.6
MS.gene67709.t1 AT5G45750 35.833 120 74 3 6 123 13 131 6.15e-19 81.3
MS.gene67709.t1 AT3G18820 29.570 186 116 6 6 185 8 184 7.09e-19 80.9
MS.gene67709.t1 AT5G03520 33.533 167 98 6 6 170 15 170 8.41e-19 80.9
MS.gene67709.t1 AT1G01200 34.132 167 95 6 7 170 29 183 1.62e-18 80.9
MS.gene67709.t1 AT1G28550 37.500 120 72 3 6 123 13 131 1.67e-18 80.1
MS.gene67709.t1 AT5G10260 32.121 165 98 5 8 170 11 163 2.06e-18 79.7
MS.gene67709.t1 AT1G05810 30.994 171 104 5 6 174 58 216 2.90e-18 80.5
MS.gene67709.t1 AT1G05810 29.670 182 114 5 6 185 12 181 3.18e-18 79.7
MS.gene67709.t1 AT2G33870 37.815 119 71 3 6 122 13 130 4.87e-18 79.0
MS.gene67709.t1 AT5G64990 33.333 165 96 5 8 170 9 161 7.38e-18 78.2
MS.gene67709.t1 AT5G47520 28.652 178 113 5 2 177 10 175 1.81e-17 77.4
MS.gene67709.t1 AT1G22740 29.167 192 119 6 1 184 1 183 2.41e-17 77.0
MS.gene67709.t1 AT1G52280 30.726 179 107 7 1 171 1 170 5.13e-17 76.3
MS.gene67709.t1 AT2G21880 27.174 184 121 4 6 184 9 184 9.30e-17 75.5
MS.gene67709.t1 AT4G39990 32.787 122 79 3 7 126 18 138 1.07e-16 75.5
MS.gene67709.t1 AT1G07410 34.454 119 75 3 6 122 12 129 1.24e-16 75.1
MS.gene67709.t1 AT5G59150 29.240 171 107 6 6 174 12 170 1.53e-16 75.1
MS.gene67709.t1 AT3G16100 29.947 187 114 7 1 179 1 178 1.82e-16 74.7
MS.gene67709.t1 AT5G47960 33.051 118 76 3 7 122 16 132 2.11e-16 74.7
MS.gene67709.t1 AT5G65270 28.729 181 113 6 7 184 18 185 2.26e-16 74.7
MS.gene67709.t1 AT4G09720 30.409 171 104 6 6 170 8 169 5.30e-16 73.2
MS.gene67709.t1 AT3G09910 28.652 178 112 5 7 181 14 179 1.06e-15 72.4
MS.gene67709.t1 AT3G09910 28.652 178 112 5 7 181 14 179 1.06e-15 72.4
MS.gene67709.t1 AT3G09910 28.652 178 112 5 7 181 14 179 1.06e-15 72.4
MS.gene67709.t1 AT5G27540 25.862 174 121 2 7 180 18 183 1.09e-15 75.1
MS.gene67709.t1 AT5G27540 25.862 174 121 2 7 180 18 183 1.09e-15 75.1
MS.gene67709.t1 AT3G46830 32.773 119 77 3 6 122 12 129 1.36e-15 72.4
MS.gene67709.t1 AT3G46830 32.773 119 77 3 6 122 12 129 1.36e-15 72.4
MS.gene67709.t1 AT1G49300 29.825 171 105 6 6 170 8 169 1.48e-15 72.0
MS.gene67709.t1 AT1G49300 29.825 171 105 6 6 170 8 169 1.48e-15 72.0
MS.gene67709.t1 AT5G64990 31.977 172 96 6 8 170 9 168 3.83e-15 71.2
MS.gene67709.t1 AT5G55080 30.769 117 79 2 7 122 14 129 6.66e-15 70.9
MS.gene67709.t1 AT3G09910 29.282 181 110 6 7 181 14 182 8.89e-15 69.7
MS.gene67709.t1 AT3G09910 29.282 181 110 6 7 181 14 182 8.89e-15 69.7
MS.gene67709.t1 AT4G09720 28.409 176 106 5 6 170 8 174 1.41e-14 69.7
MS.gene67709.t1 AT3G63150 30.286 175 112 5 7 180 15 180 2.28e-14 71.2
MS.gene67709.t1 AT5G20020 28.485 165 103 4 7 170 14 164 8.29e-14 67.8
MS.gene67709.t1 AT5G20010 28.485 165 103 4 7 170 14 164 9.08e-14 67.8
MS.gene67709.t1 AT5G55190 31.092 119 80 2 7 124 14 131 9.46e-14 67.4
MS.gene67709.t1 AT4G09720 27.473 182 106 5 6 170 8 180 1.14e-13 67.4
MS.gene67709.t1 AT5G03520 30.137 146 90 5 47 191 47 181 1.87e-12 63.9
MS.gene67709.t1 AT4G35860 25.373 134 87 4 47 179 2 123 9.80e-12 61.2

Find 47 sgRNAs with CRISPR-Local

Find 176 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTGTTCCAACCAGAATTA+TGG 0.197915 5.1:-13591867 None:intergenic
AGTGCGAATGTGGTTGTTAA+TGG 0.319066 5.1:+13591414 MS.gene67709:CDS
TAATGGAAGTATTGTGAATC+TGG 0.328007 5.1:+13591431 MS.gene67709:CDS
TCTTCTGCTTTGGTGGTTGA+AGG 0.339738 5.1:-13592756 None:intergenic
TTTGTTCCAACCAGAATTAT+GGG 0.374664 5.1:-13591866 None:intergenic
TGGTTGAAGGACAACTCTTA+TGG 0.386728 5.1:-13592743 None:intergenic
TTATGAAAATGTCTCCAAAA+AGG 0.394383 5.1:+13591648 MS.gene67709:CDS
TTGTATCGAGATAGACCTTC+GGG 0.409474 5.1:+13592396 MS.gene67709:intron
TTCACCTGAGCTGTGGTAAT+GGG 0.421707 5.1:-13592457 None:intergenic
AACCGTGGGGAAAGTATTGC+TGG 0.429322 5.1:-13590641 None:intergenic
AAAGAAGAATAAAGCACAAA+AGG 0.449553 5.1:+13592780 MS.gene67709:CDS
ATTCACCTGAGCTGTGGTAA+TGG 0.454383 5.1:-13592458 None:intergenic
ACCTGGTGTCCCCATAATTC+TGG 0.467734 5.1:+13591856 MS.gene67709:CDS
GGTGCATAATGCTTCAACTC+TGG 0.481713 5.1:-13591836 None:intergenic
AGTGAATTACAATATTGAAC+AGG 0.490190 5.1:-13592803 None:intergenic
ATTCTGGTTGGAACAAAGCT+TGG 0.495346 5.1:+13591872 MS.gene67709:CDS
TTTGTATCGAGATAGACCTT+CGG 0.498207 5.1:+13592395 MS.gene67709:intron
GTGGTAATGGGAACGGCACC+AGG 0.503169 5.1:-13592445 None:intergenic
TATTGTGAATCTGGGTTTGT+GGG 0.507703 5.1:+13591440 MS.gene67709:CDS
AATGGAAGTATTGTGAATCT+GGG 0.518446 5.1:+13591432 MS.gene67709:CDS
CTGGGTTTGTGGGATACTGC+TGG 0.538632 5.1:+13591450 MS.gene67709:CDS
GTATTGTGAATCTGGGTTTG+TGG 0.538694 5.1:+13591439 MS.gene67709:CDS
CGTTCCCATTACCACAGCTC+AGG 0.544810 5.1:+13592453 MS.gene67709:CDS
TGAATGCAGTTCAAAATCAC+AGG 0.553565 5.1:+13592604 MS.gene67709:CDS
AAATGTGTTACTGTTGGTGA+TGG 0.556572 5.1:+13590583 MS.gene67709:CDS
ACTGTTGGTGATGGAGCTGT+TGG 0.558196 5.1:+13590592 MS.gene67709:CDS
TTTATTAAATGTGTTACTGT+TGG 0.563795 5.1:+13590577 MS.gene67709:CDS
CACCAGCAATACTTTCCCCA+CGG 0.567542 5.1:+13590639 MS.gene67709:CDS
GAACTGCATTCAATGTAAGC+TGG 0.572826 5.1:-13592593 None:intergenic
CAGTTCTGCATAGACCATCC+TGG 0.577967 5.1:+13592427 MS.gene67709:CDS
TATTTGTGGAACAGGGCAAG+AGG 0.600984 5.1:+13591546 MS.gene67709:intron
ACCAGAATTATGGGGACACC+AGG 0.601533 5.1:-13591857 None:intergenic
GTATTTATTGCAGAACGTGA+AGG 0.606998 5.1:+13592705 MS.gene67709:intron
GGTGTCCCCATAATTCTGGT+TGG 0.615899 5.1:+13591860 MS.gene67709:CDS
GAGTTGAAGCATTATGCACC+TGG 0.616427 5.1:+13591839 MS.gene67709:CDS
TCGGCACCACGGTAACTCAA+AGG 0.619029 5.1:-13591586 None:intergenic
TTGTTCCAACCAGAATTATG+GGG 0.627746 5.1:-13591865 None:intergenic
CTGAGCTGTGGTAATGGGAA+CGG 0.629176 5.1:-13592452 None:intergenic
TATTAAAGGGTGAAGAGCTG+AGG 0.630029 5.1:+13592555 MS.gene67709:intron
GAAAGCCAATATGAAAACAT+CGG 0.632883 5.1:-13591605 None:intergenic
TTAAGACCTTTGAGTTACCG+TGG 0.650534 5.1:+13591580 MS.gene67709:CDS
TGACAATTTCAGTGCGAATG+TGG 0.655180 5.1:+13591404 MS.gene67709:CDS
AGAACTGCTTATCATCCCGA+AGG 0.656406 5.1:-13592411 None:intergenic
TAATGGGAACGGCACCAGGA+TGG 0.658560 5.1:-13592441 None:intergenic
TTTATTGCAGAACGTGAAGG+CGG 0.659717 5.1:+13592708 MS.gene67709:intron
ATGCAGTTCAAAATCACAGG+AGG 0.690232 5.1:+13592607 MS.gene67709:CDS
ATATGAAAACATCGGCACCA+CGG 0.709782 5.1:-13591597 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATACCATATATAAATA+TGG - chr5.1:13591947-13591966 None:intergenic 10.0%
!! TTAATACCATATATAAATAT+GGG - chr5.1:13591946-13591965 None:intergenic 10.0%
!!! AATTGAAAATTTTGATTTTT+CGG + chr5.1:13590760-13590779 MS.gene67709:intron 10.0%
!!! CAATTTCAAATTTTTATTTT+TGG + chr5.1:13590702-13590721 MS.gene67709:intron 10.0%
!!! GAATTGAAATATTTTATTTT+TGG + chr5.1:13590821-13590840 MS.gene67709:intron 10.0%
!!! TTGTTATTTGATTTATATTT+TGG + chr5.1:13591480-13591499 MS.gene67709:intron 10.0%
!! AAAATACATAAAAAAACACA+AGG - chr5.1:13591705-13591724 None:intergenic 15.0%
!! AAATACATAAAAAAACACAA+GGG - chr5.1:13591704-13591723 None:intergenic 15.0%
!! AAATTGAAGAAAAAAGAAAA+AGG - chr5.1:13590680-13590699 None:intergenic 15.0%
!! AATTGAAGAAAAAAGAAAAA+GGG - chr5.1:13590679-13590698 None:intergenic 15.0%
!! ATTTATATATGGTATTAATC+AGG + chr5.1:13591948-13591967 MS.gene67709:intron 15.0%
!! GAAAATATTTAATACAAATC+TGG - chr5.1:13592285-13592304 None:intergenic 15.0%
!! TAATACCATATATAAATATG+GGG - chr5.1:13591945-13591964 None:intergenic 15.0%
!! TGTTAATTTAAAGATTGAAA+TGG + chr5.1:13591014-13591033 MS.gene67709:intron 15.0%
!! TTTATATATGGTATTAATCA+GGG + chr5.1:13591949-13591968 MS.gene67709:intron 15.0%
!!! AATTTTGATTTTTGCTTATT+TGG + chr5.1:13590767-13590786 MS.gene67709:intron 15.0%
!!! AATTTTTATTTTTGGGTATT+TGG + chr5.1:13590710-13590729 MS.gene67709:intron 15.0%
!!! AGTTTGTTGAATTTAAAATT+TGG + chr5.1:13591082-13591101 MS.gene67709:intron 15.0%
!!! ATTTTGATTTTTGCTTATTT+GGG + chr5.1:13590768-13590787 MS.gene67709:intron 15.0%
!!! ATTTTTATTTTTGGGTATTT+GGG + chr5.1:13590711-13590730 MS.gene67709:intron 15.0%
!!! CAAAAATCAAAATTTTCAAT+TGG - chr5.1:13590761-13590780 None:intergenic 15.0%
!!! GTTTGTTGAATTTAAAATTT+GGG + chr5.1:13591083-13591102 MS.gene67709:intron 15.0%
!!! TGTAAATTTCAAATTTGTTA+TGG + chr5.1:13591129-13591148 MS.gene67709:intron 15.0%
!!! TTATTTGATTTATATTTTGG+TGG + chr5.1:13591483-13591502 MS.gene67709:intron 15.0%
!!! TTGTGTTTTTTTATGTATTT+TGG + chr5.1:13591704-13591723 MS.gene67709:intron 15.0%
!!! TTTGGAATTTATATGTAATT+GGG + chr5.1:13591056-13591075 MS.gene67709:intron 15.0%
!! AATATTAAGTCGAAAAAAAC+TGG - chr5.1:13592355-13592374 None:intergenic 20.0%
!! ATTAAATTAAATCTGACATG+TGG + chr5.1:13592528-13592547 MS.gene67709:intron 20.0%
!! ATTGAAGAAAAAAGAAAAAG+GGG - chr5.1:13590678-13590697 None:intergenic 20.0%
!! CAAATCATAATTTACATACT+CGG - chr5.1:13590979-13590998 None:intergenic 20.0%
!! CAATTCAAAATCTAAAAAAC+AGG - chr5.1:13590807-13590826 None:intergenic 20.0%
!! GATACAAATGACAAAATAAT+AGG - chr5.1:13592383-13592402 None:intergenic 20.0%
!! TCAAAGTTGAAAAAAAAAAG+AGG - chr5.1:13590869-13590888 None:intergenic 20.0%
!! TTAAATTAAATCTGACATGT+GGG + chr5.1:13592529-13592548 MS.gene67709:intron 20.0%
!!! AAATTATGATTTGGAATGAT+GGG + chr5.1:13590986-13591005 MS.gene67709:intron 20.0%
!!! ATTCTTGTAAATTTGAAATC+TGG + chr5.1:13590929-13590948 MS.gene67709:intron 20.0%
!!! GTTTGATTTAAAAGTTGAAA+TGG + chr5.1:13591216-13591235 MS.gene67709:intron 20.0%
!!! GTTTGGAATTTATATGTAAT+TGG + chr5.1:13591055-13591074 MS.gene67709:intron 20.0%
!!! TAAATTATGATTTGGAATGA+TGG + chr5.1:13590985-13591004 MS.gene67709:intron 20.0%
!!! TTTATTAAATGTGTTACTGT+TGG + chr5.1:13590577-13590596 MS.gene67709:CDS 20.0%
! AAAACTAAAACAAACCAGAA+AGG - chr5.1:13592224-13592243 None:intergenic 25.0%
! AAAGAAGAATAAAGCACAAA+AGG + chr5.1:13592780-13592799 MS.gene67709:CDS 25.0%
! AATGTGAAGTTAAAGTTTGT+TGG + chr5.1:13592680-13592699 MS.gene67709:intron 25.0%
! ATACATTGTATTTGCAATTG+GGG + chr5.1:13592248-13592267 MS.gene67709:intron 25.0%
! ATAGTTGATTATGAAATGCA+TGG - chr5.1:13592002-13592021 None:intergenic 25.0%
! ATATATAAATATGGGGAAGA+TGG - chr5.1:13591938-13591957 None:intergenic 25.0%
! ATCTTCCCCATATTTATATA+TGG + chr5.1:13591937-13591956 MS.gene67709:intron 25.0%
! CATACATTGTATTTGCAATT+GGG + chr5.1:13592247-13592266 MS.gene67709:intron 25.0%
! CGAGTATGTAAATTATGATT+TGG + chr5.1:13590977-13590996 MS.gene67709:intron 25.0%
! GATTGTTGGAATTAAAAGTT+GGG + chr5.1:13591274-13591293 MS.gene67709:intron 25.0%
! GGATTTATTGTGTTTATTTG+TGG + chr5.1:13591532-13591551 MS.gene67709:intron 25.0%
! TAGTTGATTATGAAATGCAT+GGG - chr5.1:13592001-13592020 None:intergenic 25.0%
! TGATTGTTGGAATTAAAAGT+TGG + chr5.1:13591273-13591292 MS.gene67709:intron 25.0%
! TTATGAAAATGTCTCCAAAA+AGG + chr5.1:13591648-13591667 MS.gene67709:CDS 25.0%
! TTGAAGAAAAAAGAAAAAGG+GGG - chr5.1:13590677-13590696 None:intergenic 25.0%
! TTGATTCTTCTAATTCACAA+TGG + chr5.1:13592650-13592669 MS.gene67709:intron 25.0%
!! AATTTTTATTCTGCTACTCT+AGG + chr5.1:13592478-13592497 MS.gene67709:intron 25.0%
!! ATGGATATAATGTGAGATTT+TGG + chr5.1:13591235-13591254 MS.gene67709:intron 25.0%
!!! AATTTTGATTTTTCGGTGTT+TGG + chr5.1:13590895-13590914 MS.gene67709:intron 25.0%
!!! ATATTGATTTGTGAATTTGC+TGG + chr5.1:13591317-13591336 MS.gene67709:intron 25.0%
!!! ATTTTGATTTTTCGGTGTTT+GGG + chr5.1:13590896-13590915 MS.gene67709:intron 25.0%
!!! ATTTTGTTGAACTTGCTTTT+TGG + chr5.1:13591351-13591370 MS.gene67709:intron 25.0%
!!! TATGTATTTTGGTTTATCTG+CGG + chr5.1:13591715-13591734 MS.gene67709:intron 25.0%
!!! TTTTGGTGGATTTTGTTATT+CGG + chr5.1:13591497-13591516 MS.gene67709:intron 25.0%
AGATACCAGTAGAAAAACAA+TGG - chr5.1:13592165-13592184 None:intergenic 30.0%
AGATTGAAATGGATACAATG+TGG + chr5.1:13591025-13591044 MS.gene67709:intron 30.0%
AGTTGATTATGAAATGCATG+GGG - chr5.1:13592000-13592019 None:intergenic 30.0%
ATTGTGTTTATTTGTGGAAC+AGG + chr5.1:13591538-13591557 MS.gene67709:intron 30.0%
CCAATTGCAAATACAATGTA+TGG - chr5.1:13592249-13592268 None:intergenic 30.0%
CCATACATTGTATTTGCAAT+TGG + chr5.1:13592246-13592265 MS.gene67709:intron 30.0%
CTGAAATTGTCAAAAACTGT+CGG - chr5.1:13591396-13591415 None:intergenic 30.0%
GAAAGCCAATATGAAAACAT+CGG - chr5.1:13591608-13591627 None:intergenic 30.0%
GATTGAAATGGATACAATGT+GGG + chr5.1:13591026-13591045 MS.gene67709:intron 30.0%
TCGAGTTTATGTTTGATTGT+TGG + chr5.1:13591260-13591279 MS.gene67709:intron 30.0%
TTAATACAAATCTGGAGACA+GGG - chr5.1:13592277-13592296 None:intergenic 30.0%
TTGTGTTTATTTGTGGAACA+GGG + chr5.1:13591539-13591558 MS.gene67709:intron 30.0%
TTTAATACAAATCTGGAGAC+AGG - chr5.1:13592278-13592297 None:intergenic 30.0%
TTTGTTCCAACCAGAATTAT+GGG - chr5.1:13591869-13591888 None:intergenic 30.0%
! AACAATGGTGATGAAAAACA+AGG - chr5.1:13592150-13592169 None:intergenic 30.0%
! ATTTTCAATTGGAAAAAGCC+AGG - chr5.1:13590750-13590769 None:intergenic 30.0%
! TGTAAATTTGAAATCTGGCA+TGG + chr5.1:13590934-13590953 MS.gene67709:intron 30.0%
! TTCTTCTTTTTCTTCTGCTT+TGG - chr5.1:13592769-13592788 None:intergenic 30.0%
! TTTGGAGACATTTTCATAAC+TGG - chr5.1:13591647-13591666 None:intergenic 30.0%
!! AATGGAAGTATTGTGAATCT+GGG + chr5.1:13591432-13591451 MS.gene67709:CDS 30.0%
!! GTTATGGAAAGTACTTTGTA+AGG + chr5.1:13591145-13591164 MS.gene67709:intron 30.0%
!! TAATGGAAGTATTGTGAATC+TGG + chr5.1:13591431-13591450 MS.gene67709:CDS 30.0%
!!! TTGGGTTGTTTTTAAATTCC+TGG + chr5.1:13590729-13590748 MS.gene67709:intron 30.0%
!!! TTTGGTGGATTTTGTTATTC+GGG + chr5.1:13591498-13591517 MS.gene67709:intron 30.0%
!!! TTTTGATTTTTCTGCCTTTC+TGG + chr5.1:13592207-13592226 MS.gene67709:intron 30.0%
AAAAAACTGGTACACTGATC+AGG - chr5.1:13592342-13592361 None:intergenic 35.0%
AACTAGCACAACCAGAATTA+TGG - chr5.1:13592318-13592337 None:intergenic 35.0%
AAGTACTTTGTAAGGCAACT+GGG + chr5.1:13591153-13591172 MS.gene67709:intron 35.0%
ACTAGCACAACCAGAATTAT+GGG - chr5.1:13592317-13592336 None:intergenic 35.0%
ATAAAAATTCACCTGAGCTG+TGG - chr5.1:13592467-13592486 None:intergenic 35.0%
CGAATAATCTCCCATAATTC+TGG + chr5.1:13592304-13592323 MS.gene67709:intron 35.0%
CTTTGTTCCAACCAGAATTA+TGG - chr5.1:13591870-13591889 None:intergenic 35.0%
GTATTTATTGCAGAACGTGA+AGG + chr5.1:13592705-13592724 MS.gene67709:intron 35.0%
TATTGTGAATCTGGGTTTGT+GGG + chr5.1:13591440-13591459 MS.gene67709:CDS 35.0%
TCTGCGGTGAACAATATATA+CGG + chr5.1:13591731-13591750 MS.gene67709:intron 35.0%
TGAATGCAGTTCAAAATCAC+AGG + chr5.1:13592604-13592623 MS.gene67709:CDS 35.0%
TTGTTCCAACCAGAATTATG+GGG - chr5.1:13591868-13591887 None:intergenic 35.0%
TTTGTATCGAGATAGACCTT+CGG + chr5.1:13592395-13592414 MS.gene67709:intron 35.0%
! AAAGTACTTTGTAAGGCAAC+TGG + chr5.1:13591152-13591171 MS.gene67709:intron 35.0%
! AAATGTGTTACTGTTGGTGA+TGG + chr5.1:13590583-13590602 MS.gene67709:CDS 35.0%
! ATGGATACAATGTGGGATTT+TGG + chr5.1:13591033-13591052 MS.gene67709:intron 35.0%
! CATGCTTGTTTCATTTTCAG+TGG + chr5.1:13591810-13591829 MS.gene67709:intron 35.0%
! GGTATCTGATACATCAGTTT+TGG + chr5.1:13592178-13592197 MS.gene67709:intron 35.0%
! TCAAAATCACAGGAGGTATA+TGG + chr5.1:13592614-13592633 MS.gene67709:intron 35.0%
! TTCTTGTTCCCATTTTGCTT+TGG + chr5.1:13591675-13591694 MS.gene67709:intron 35.0%
! TTCTTTTTCTTCTGCTTTGG+TGG - chr5.1:13592766-13592785 None:intergenic 35.0%
!! CATCACCATTGTTTTTCTAC+TGG + chr5.1:13592157-13592176 MS.gene67709:intron 35.0%
!! TATGATTTGGAATGATGGGT+TGG + chr5.1:13590990-13591009 MS.gene67709:intron 35.0%
!!! TACAATGTGGGATTTTGGTT+TGG + chr5.1:13591038-13591057 MS.gene67709:intron 35.0%
!!! TGTTGAACTTGCTTTTTGGT+TGG + chr5.1:13591355-13591374 MS.gene67709:intron 35.0%
AAGGGACACCAAAGCAAAAT+GGG - chr5.1:13591686-13591705 None:intergenic 40.0%
AGTGCGAATGTGGTTGTTAA+TGG + chr5.1:13591414-13591433 MS.gene67709:CDS 40.0%
ATATGAAAACATCGGCACCA+CGG - chr5.1:13591600-13591619 None:intergenic 40.0%
ATGCAGTTCAAAATCACAGG+AGG + chr5.1:13592607-13592626 MS.gene67709:CDS 40.0%
CCCTAGCAAACAAAAAGAAC+CGG - chr5.1:13592082-13592101 None:intergenic 40.0%
CTGCGGTGAACAATATATAC+GGG + chr5.1:13591732-13591751 MS.gene67709:intron 40.0%
GAACTGCATTCAATGTAAGC+TGG - chr5.1:13592596-13592615 None:intergenic 40.0%
GAAGTTTCCATTTGTCGAAC+TGG + chr5.1:13592044-13592063 MS.gene67709:intron 40.0%
GACATGTGGGTCCTATTAAA+GGG + chr5.1:13592542-13592561 MS.gene67709:intron 40.0%
GGCATGGAAAATGCTTTGTA+AGG + chr5.1:13590950-13590969 MS.gene67709:intron 40.0%
GTATTGTGAATCTGGGTTTG+TGG + chr5.1:13591439-13591458 MS.gene67709:CDS 40.0%
TATTAAAGGGTGAAGAGCTG+AGG + chr5.1:13592555-13592574 MS.gene67709:intron 40.0%
TCAGCTCTTCACCCTTTAAT+AGG - chr5.1:13592556-13592575 None:intergenic 40.0%
TGACAATTTCAGTGCGAATG+TGG + chr5.1:13591404-13591423 MS.gene67709:CDS 40.0%
TGACATGTGGGTCCTATTAA+AGG + chr5.1:13592541-13592560 MS.gene67709:intron 40.0%
TGGTTGAAGGACAACTCTTA+TGG - chr5.1:13592746-13592765 None:intergenic 40.0%
TTGTATCGAGATAGACCTTC+GGG + chr5.1:13592396-13592415 MS.gene67709:intron 40.0%
TTTATTGCAGAACGTGAAGG+CGG + chr5.1:13592708-13592727 MS.gene67709:intron 40.0%
! ATTCTGGTTGGAACAAAGCT+TGG + chr5.1:13591872-13591891 MS.gene67709:CDS 40.0%
! TTAAGACCTTTGAGTTACCG+TGG + chr5.1:13591580-13591599 MS.gene67709:CDS 40.0%
!! ACCGGTTCTTTTTGTTTGCT+AGG + chr5.1:13592078-13592097 MS.gene67709:intron 40.0%
!! CCGGTTCTTTTTGTTTGCTA+GGG + chr5.1:13592079-13592098 MS.gene67709:intron 40.0%
!! CGGTTCTTTTTGTTTGCTAG+GGG + chr5.1:13592080-13592099 MS.gene67709:intron 40.0%
!! GGTTCTTTTTGTTTGCTAGG+GGG + chr5.1:13592081-13592100 MS.gene67709:intron 40.0%
!! TTTTTGTTTGCTAGGGGGAA+GGG + chr5.1:13592086-13592105 MS.gene67709:intron 40.0%
!!! CTTGCTTTTTGGTTGGAAAC+AGG + chr5.1:13591362-13591381 MS.gene67709:intron 40.0%
!!! GGAACAAGAAAGCACCTTTT+TGG - chr5.1:13591665-13591684 None:intergenic 40.0%
!!! TGGTGCCGATGTTTTCATAT+TGG + chr5.1:13591600-13591619 MS.gene67709:CDS 40.0%
AGAACTGCTTATCATCCCGA+AGG - chr5.1:13592414-13592433 None:intergenic 45.0%
ATTCACCTGAGCTGTGGTAA+TGG - chr5.1:13592461-13592480 None:intergenic 45.0%
CAAGGGACACCAAAGCAAAA+TGG - chr5.1:13591687-13591706 None:intergenic 45.0%
CAGTTAGCCAGTTCGACAAA+TGG - chr5.1:13592054-13592073 None:intergenic 45.0%
GGTGCATAATGCTTCAACTC+TGG - chr5.1:13591839-13591858 None:intergenic 45.0%
GTTATTCGGGAGGTTCTTTC+TGG + chr5.1:13591511-13591530 MS.gene67709:intron 45.0%
TATTTGTGGAACAGGGCAAG+AGG + chr5.1:13591546-13591565 MS.gene67709:intron 45.0%
TTCACCTGAGCTGTGGTAAT+GGG - chr5.1:13592460-13592479 None:intergenic 45.0%
! GAGTTGAAGCATTATGCACC+TGG + chr5.1:13591839-13591858 MS.gene67709:CDS 45.0%
! TCTTCTGCTTTGGTGGTTGA+AGG - chr5.1:13592759-13592778 None:intergenic 45.0%
!! CTTTTTGTTTGCTAGGGGGA+AGG + chr5.1:13592085-13592104 MS.gene67709:intron 45.0%
!! TTTTGTTTGCTAGGGGGAAG+GGG + chr5.1:13592087-13592106 MS.gene67709:intron 45.0%
!!! GGTGGATTTTGTTATTCGGG+AGG + chr5.1:13591501-13591520 MS.gene67709:intron 45.0%
!!! AATTTCAAATTTTTATTTTT+GGG + chr5.1:13590703-13590722 MS.gene67709:intron 5.0%
ACCAGAATTATGGGGACACC+AGG - chr5.1:13591860-13591879 None:intergenic 50.0%
ACCTGGTGTCCCCATAATTC+TGG + chr5.1:13591856-13591875 MS.gene67709:CDS 50.0%
CACCAGCAATACTTTCCCCA+CGG + chr5.1:13590639-13590658 MS.gene67709:CDS 50.0%
CAGTTCTGCATAGACCATCC+TGG + chr5.1:13592427-13592446 MS.gene67709:CDS 50.0%
GAACTGGCTAACTGCTGAAC+CGG + chr5.1:13592060-13592079 MS.gene67709:intron 50.0%
GGGAAGAATGACAAACCGTG+GGG - chr5.1:13590657-13590676 None:intergenic 50.0%
GGGGAAGAATGACAAACCGT+GGG - chr5.1:13590658-13590677 None:intergenic 50.0%
GGTGTCCCCATAATTCTGGT+TGG + chr5.1:13591860-13591879 MS.gene67709:CDS 50.0%
! TTTGTTTGCTAGGGGGAAGG+GGG + chr5.1:13592088-13592107 MS.gene67709:intron 50.0%
!! AACCGTGGGGAAAGTATTGC+TGG - chr5.1:13590644-13590663 None:intergenic 50.0%
!! ACTGTTGGTGATGGAGCTGT+TGG + chr5.1:13590592-13590611 MS.gene67709:CDS 50.0%
!! CTGAGCTGTGGTAATGGGAA+CGG - chr5.1:13592455-13592474 None:intergenic 50.0%
CGTTCCCATTACCACAGCTC+AGG + chr5.1:13592453-13592472 MS.gene67709:CDS 55.0%
CTGGGTTTGTGGGATACTGC+TGG + chr5.1:13591450-13591469 MS.gene67709:CDS 55.0%
GGGGGAAGAATGACAAACCG+TGG - chr5.1:13590659-13590678 None:intergenic 55.0%
TAATGGGAACGGCACCAGGA+TGG - chr5.1:13592444-13592463 None:intergenic 55.0%
TCGGCACCACGGTAACTCAA+AGG - chr5.1:13591589-13591608 None:intergenic 55.0%
! TTGTTTGCTAGGGGGAAGGG+GGG + chr5.1:13592089-13592108 MS.gene67709:intron 55.0%
TAGGGGGAAGGGGGGATTTC+TGG + chr5.1:13592097-13592116 MS.gene67709:intron 60.0%
!! GTGGTAATGGGAACGGCACC+AGG - chr5.1:13592448-13592467 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 13590562 13592819 13590562 ID=MS.gene67709
chr5.1 mRNA 13590562 13592819 13590562 ID=MS.gene67709.t1;Parent=MS.gene67709
chr5.1 exon 13590562 13590660 13590562 ID=MS.gene67709.t1.exon1;Parent=MS.gene67709.t1
chr5.1 CDS 13590562 13590660 13590562 ID=cds.MS.gene67709.t1;Parent=MS.gene67709.t1
chr5.1 exon 13591384 13591471 13591384 ID=MS.gene67709.t1.exon2;Parent=MS.gene67709.t1
chr5.1 CDS 13591384 13591471 13591384 ID=cds.MS.gene67709.t1;Parent=MS.gene67709.t1
chr5.1 exon 13591560 13591669 13591560 ID=MS.gene67709.t1.exon3;Parent=MS.gene67709.t1
chr5.1 CDS 13591560 13591669 13591560 ID=cds.MS.gene67709.t1;Parent=MS.gene67709.t1
chr5.1 exon 13591830 13591893 13591830 ID=MS.gene67709.t1.exon4;Parent=MS.gene67709.t1
chr5.1 CDS 13591830 13591893 13591830 ID=cds.MS.gene67709.t1;Parent=MS.gene67709.t1
chr5.1 exon 13592410 13592474 13592410 ID=MS.gene67709.t1.exon5;Parent=MS.gene67709.t1
chr5.1 CDS 13592410 13592474 13592410 ID=cds.MS.gene67709.t1;Parent=MS.gene67709.t1
chr5.1 exon 13592563 13592628 13592563 ID=MS.gene67709.t1.exon6;Parent=MS.gene67709.t1
chr5.1 CDS 13592563 13592628 13592563 ID=cds.MS.gene67709.t1;Parent=MS.gene67709.t1
chr5.1 exon 13592718 13592819 13592718 ID=MS.gene67709.t1.exon7;Parent=MS.gene67709.t1
chr5.1 CDS 13592718 13592819 13592718 ID=cds.MS.gene67709.t1;Parent=MS.gene67709.t1
Gene Sequence

>MS.gene67709

ATGAGTGCTTCTAGGTTTATTAAATGTGTTACTGTTGGTGATGGAGCTGTTGGCAAAACTTGTTTGTTGATTTCTTACACCAGCAATACTTTCCCCACGGTTTGTCATTCTTCCCCCTTTTTCTTTTTTCTTCAATTTTTCAATTTCAAATTTTTATTTTTGGGTATTTGGGTTGTTTTTAAATTCCTGGCTTTTTCCAATTGAAAATTTTGATTTTTGCTTATTTGGGTTGTGTTAAAATTCCTGTTTTTTAGATTTTGAATTGAAATATTTTATTTTTGGTTGTTTGAGTTGTGTTTAAGTTCCTCTTTTTTTTTTCAACTTTGAATTGAAAATTTTGATTTTTCGGTGTTTGGGTTATATTTAAATTCTTGTAAATTTGAAATCTGGCATGGAAAATGCTTTGTAAGGCAACCGAGTATGTAAATTATGATTTGGAATGATGGGTTGGATGTTAATTTAAAGATTGAAATGGATACAATGTGGGATTTTGGTTTGGAATTTATATGTAATTGGGTTGAGTTTGTTGAATTTAAAATTTGGGTGTTTAGATTATATTTAAAGTCATGTAAATTTCAAATTTGTTATGGAAAGTACTTTGTAAGGCAACTGGGTATGTAAATTGTGATTTGAAATGATAGTAATACATTGAGTGTTTGATTTAAAAGTTGAAATGGATATAATGTGAGATTTTGGTTTCGAGTTTATGTTTGATTGTTGGAATTAAAAGTTGGGTTGAGTTTGTGTTGATGATGATATTGATTTGTGAATTTGCTGGACTATCAATTTATTTTGTTGAACTTGCTTTTTGGTTGGAAACAGGATTATGTGCCGACAGTTTTTGACAATTTCAGTGCGAATGTGGTTGTTAATGGAAGTATTGTGAATCTGGGTTTGTGGGATACTGCTGGTAATGTTTTGTTATTTGATTTATATTTTGGTGGATTTTGTTATTCGGGAGGTTCTTTCTGGATTTATTGTGTTTATTTGTGGAACAGGGCAAGAGGATTATAACAGATTAAGACCTTTGAGTTACCGTGGTGCCGATGTTTTCATATTGGCTTTCTCTCTCATAAGCAAAGCCAGTTATGAAAATGTCTCCAAAAAGGTGCTTTCTTGTTCCCATTTTGCTTTGGTGTCCCTTGTGTTTTTTTATGTATTTTGGTTTATCTGCGGTGAACAATATATACGGGTTGTGTTATATGTTAGTAGAATGTTTAGTTTATGAGAAATTACTGATACATCACACATGCTTGTTTCATTTTCAGTGGATTCCAGAGTTGAAGCATTATGCACCTGGTGTCCCCATAATTCTGGTTGGAACAAAGCTTGGTATGTTAATTGCTGCATAATGTGATATCGATATGTTGATGCCATCTTCCCCATATTTATATATGGTATTAATCAGGGTTTTTTCTATGATGAAATCACATAGCCCCATGCATTTCATAATCAACTATATTGATGATGTAGATATCTTTAGAAGTTTCCATTTGTCGAACTGGCTAACTGCTGAACCGGTTCTTTTTGTTTGCTAGGGGGAAGGGGGGATTTCTGGTGCATTTCATTTTCGTTCTATTTGATTCCTTGTTTTTCATCACCATTGTTTTTCTACTGGTATCTGATACATCAGTTTTGGTCAATGTTTTGATTTTTCTGCCTTTCTGGTTTGTTTTAGTTTTATCCATACATTGTATTTGCAATTGGGGTTTCCCTGTCTCCAGATTTGTATTAAATATTTTCGAATAATCTCCCATAATTCTGGTTGTGCTAGTTTCCTGATCAGTGTACCAGTTTTTTTCGACTTAATATTTAGTTCCTATTATTTTGTCATTTGTATCGAGATAGACCTTCGGGATGATAAGCAGTTCTGCATAGACCATCCTGGTGCCGTTCCCATTACCACAGCTCAGGTGAATTTTTATTCTGCTACTCTAGGATCTAGTAGTTTACTTGTTAAATGTATATTAAATTAAATCTGACATGTGGGTCCTATTAAAGGGTGAAGAGCTGAGGAAGCTGATTAATGCACCAGCTTACATTGAATGCAGTTCAAAATCACAGGAGGTATATGGTTTTCTGATTAATTTGATTCTTCTAATTCACAATGGTTAATTTAATGTGAAGTTAAAGTTTGTTGGATGTATTTATTGCAGAACGTGAAGGCGGTGTTTGACGCAGCCATAAGAGTTGTCCTTCAACCACCAAAGCAGAAGAAAAAGAAGAATAAAGCACAAAAGGCCTGTTCAATATTGTAA
Protein sequence

>MS.gene67709.t1

MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSIVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKSQENVKAVFDAAIRVVLQPPKQKKKKNKAQKACSIL