AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene012136

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene012136.t1 MTR_8g075240 100.000 197 0 0 1 197 1 197 4.13e-147 406
MS.gene012136.t1 MTR_5g022600 97.462 197 5 0 1 197 1 197 1.39e-143 397
MS.gene012136.t1 MTR_4g073250 90.355 197 19 0 1 197 1 197 8.50e-136 378
MS.gene012136.t1 MTR_3g078260 78.866 194 40 1 2 194 4 197 1.26e-118 335
MS.gene012136.t1 MTR_4g088055 85.955 178 25 0 1 178 1 178 1.26e-117 332
MS.gene012136.t1 MTR_2g090875 84.831 178 27 0 1 178 1 178 2.26e-117 331
MS.gene012136.t1 MTR_6g087980 75.377 199 46 1 1 196 1 199 4.52e-113 321
MS.gene012136.t1 MTR_3g078260 87.395 119 15 0 2 120 4 122 3.21e-77 228
MS.gene012136.t1 MTR_7g103070 30.851 188 116 4 8 192 18 194 5.03e-26 99.8
MS.gene012136.t1 MTR_1g068740 31.383 188 116 6 6 191 15 191 2.14e-25 98.2
MS.gene012136.t1 MTR_1g068730 31.383 188 116 6 6 191 15 191 3.84e-25 97.8
MS.gene012136.t1 MTR_1g115325 32.386 176 106 6 6 179 15 179 7.33e-25 97.1
MS.gene012136.t1 MTR_7g100020 31.383 188 116 6 6 191 15 191 7.66e-25 97.1
MS.gene012136.t1 MTR_8g093740 31.053 190 116 5 6 192 13 190 4.86e-24 94.7
MS.gene012136.t1 MTR_3g096350 30.159 189 117 5 7 192 13 189 8.25e-24 94.0
MS.gene012136.t1 MTR_8g006970 33.728 169 98 6 6 172 8 164 6.46e-23 90.9
MS.gene012136.t1 MTR_1g094220 32.584 178 103 7 7 180 32 196 6.82e-23 91.3
MS.gene012136.t1 MTR_8g103550 32.222 180 107 6 8 184 11 178 9.36e-23 90.9
MS.gene012136.t1 MTR_8g006970 34.066 182 101 8 6 180 22 191 9.56e-23 91.3
MS.gene012136.t1 MTR_8g031870 30.233 172 106 5 1 170 1 160 1.80e-22 90.1
MS.gene012136.t1 MTR_1g029450 31.285 179 108 5 6 181 17 183 1.98e-22 90.5
MS.gene012136.t1 MTR_1g094220 34.320 169 94 7 7 171 32 187 2.17e-22 90.1
MS.gene012136.t1 MTR_1g094220 34.320 169 94 7 7 171 32 187 2.55e-22 90.1
MS.gene012136.t1 MTR_1g062760 30.508 177 108 5 8 181 16 180 2.75e-22 90.1
MS.gene012136.t1 MTR_7g081700 31.551 187 109 7 6 185 8 182 3.11e-22 89.7
MS.gene012136.t1 MTR_4g063160 30.851 188 115 7 6 189 15 191 3.73e-22 89.7
MS.gene012136.t1 MTR_4g098950 33.333 165 96 5 8 170 11 163 4.56e-22 89.4
MS.gene012136.t1 MTR_2g005500 31.429 175 103 6 1 170 1 163 5.17e-22 89.0
MS.gene012136.t1 MTR_1g094220 33.333 171 97 7 7 173 32 189 7.23e-22 89.4
MS.gene012136.t1 MTR_1g068730 33.566 143 85 5 6 140 15 155 2.29e-21 86.7
MS.gene012136.t1 MTR_3g064390 33.520 179 104 5 8 183 12 178 2.36e-21 87.4
MS.gene012136.t1 MTR_6g021790 28.177 181 116 5 1 179 1 169 7.85e-21 86.3
MS.gene012136.t1 MTR_2g027660 28.488 172 109 5 1 170 1 160 9.10e-21 85.9
MS.gene012136.t1 MTR_2g096550 30.319 188 116 6 6 189 15 191 9.68e-21 85.9
MS.gene012136.t1 MTR_1g068740 32.624 141 87 4 6 139 15 154 1.38e-20 85.1
MS.gene012136.t1 MTR_5g013900 32.727 165 97 5 8 170 11 163 1.73e-20 85.1
MS.gene012136.t1 MTR_8g031830 29.825 171 106 5 1 169 1 159 3.13e-20 84.3
MS.gene012136.t1 MTR_2g083860 29.282 181 114 5 6 184 13 181 4.18e-20 84.3
MS.gene012136.t1 MTR_8g027220 31.522 184 97 7 8 169 28 204 4.70e-20 84.7
MS.gene012136.t1 MTR_5g076590 32.121 165 98 4 8 170 12 164 5.71e-20 83.6
MS.gene012136.t1 MTR_8g031660 29.070 172 108 5 1 170 1 160 7.01e-20 83.6
MS.gene012136.t1 MTR_3g069510 30.729 192 117 6 6 195 12 189 8.03e-20 83.6
MS.gene012136.t1 MTR_2g102060 30.909 165 100 5 8 170 12 164 1.17e-19 82.8
MS.gene012136.t1 MTR_2g005510 31.579 171 103 5 6 174 15 173 1.23e-19 83.2
MS.gene012136.t1 MTR_8g031680 27.907 172 110 5 1 170 1 160 1.59e-19 82.8
MS.gene012136.t1 MTR_1g052475 33.333 165 96 5 8 170 17 169 1.74e-19 82.8
MS.gene012136.t1 MTR_7g117910 35.714 126 78 3 8 131 22 146 4.10e-19 81.6
MS.gene012136.t1 MTR_3g087160 30.909 165 100 4 8 170 11 163 4.74e-19 81.3
MS.gene012136.t1 MTR_4g079350 33.333 150 90 4 6 146 13 161 5.73e-19 81.3
MS.gene012136.t1 MTR_0262s0050 32.727 165 97 6 8 170 17 169 5.91e-19 81.6
MS.gene012136.t1 MTR_8g090215 31.515 165 99 5 8 170 11 163 7.50e-19 80.9
MS.gene012136.t1 MTR_1g097420 31.250 192 115 7 1 184 1 183 7.58e-19 80.9
MS.gene012136.t1 MTR_3g064390 36.885 122 74 3 8 127 12 132 8.46e-19 79.7
MS.gene012136.t1 MTR_7g051940 28.947 190 121 5 6 193 13 190 1.07e-18 80.5
MS.gene012136.t1 MTR_1g090717 28.495 186 118 5 7 188 16 190 1.30e-18 80.5
MS.gene012136.t1 MTR_4g088090 31.737 167 100 5 6 170 13 167 1.55e-18 80.1
MS.gene012136.t1 MTR_8g089985 32.121 165 98 5 8 170 19 171 1.68e-18 80.5
MS.gene012136.t1 MTR_2g075950 35.833 120 74 3 6 123 13 131 2.83e-18 79.7
MS.gene012136.t1 MTR_2g014990 35.833 120 74 3 6 123 13 131 4.43e-18 79.0
MS.gene012136.t1 MTR_4g064897 32.609 138 83 4 6 134 12 148 5.54e-18 79.0
MS.gene012136.t1 MTR_7g405790 28.947 190 121 5 6 193 15 192 8.28e-18 78.6
MS.gene012136.t1 MTR_3g096350 34.746 118 73 3 7 121 13 129 1.00e-17 76.6
MS.gene012136.t1 MTR_3g096350 34.746 118 73 3 7 121 13 129 1.11e-17 76.3
MS.gene012136.t1 MTR_3g086980 31.325 166 98 6 8 170 18 170 1.17e-17 78.2
MS.gene012136.t1 MTR_2g101890 29.570 186 116 6 6 185 10 186 2.86e-17 76.6
MS.gene012136.t1 MTR_1g078200 30.114 176 105 6 6 177 14 175 4.62e-17 76.6
MS.gene012136.t1 MTR_4g069850 28.495 186 118 5 6 185 8 184 5.66e-17 75.9
MS.gene012136.t1 MTR_8g107070 29.101 189 120 5 6 192 14 190 7.90e-17 76.6
MS.gene012136.t1 MTR_8g093740 28.902 173 99 4 22 192 7 157 1.34e-16 74.3
MS.gene012136.t1 MTR_4g012940 29.016 193 120 7 1 185 1 184 2.29e-16 74.3
MS.gene012136.t1 MTR_8g036220 31.138 167 101 6 6 170 16 170 2.67e-16 74.7
MS.gene012136.t1 MTR_8g092020 26.238 202 122 4 6 188 12 205 6.98e-16 73.2
MS.gene012136.t1 MTR_2g090865 36.667 120 73 3 6 123 11 129 8.22e-16 72.8
MS.gene012136.t1 MTR_7g103070 29.054 148 92 3 47 192 2 138 1.19e-15 71.2
MS.gene012136.t1 MTR_6g079550 29.697 165 103 5 6 161 12 172 3.09e-15 71.6
MS.gene012136.t1 MTR_1g097420 31.034 174 105 6 17 184 46 210 3.27e-15 71.6
MS.gene012136.t1 MTR_7g094810 30.460 174 113 2 7 180 9 174 4.66e-15 73.2
MS.gene012136.t1 MTR_7g094810 28.342 187 100 3 7 180 9 174 4.67e-15 73.2
MS.gene012136.t1 MTR_7g094810 28.342 187 100 3 7 180 9 174 4.68e-15 73.2
MS.gene012136.t1 MTR_7g094810 28.342 187 100 3 7 180 9 174 4.89e-15 72.8
MS.gene012136.t1 MTR_7g094810 30.460 174 113 2 7 180 9 174 4.92e-15 73.2
MS.gene012136.t1 MTR_3g107717 28.485 165 103 4 7 170 14 164 3.46e-14 68.6
MS.gene012136.t1 MTR_4g099470 30.822 146 87 5 29 172 7 140 3.48e-14 67.8
MS.gene012136.t1 MTR_3g107707 28.485 165 103 4 7 170 14 164 3.76e-14 68.6
MS.gene012136.t1 MTR_3g107713 28.485 165 103 4 7 170 14 164 4.03e-14 68.6
MS.gene012136.t1 MTR_1g072280 28.571 175 115 4 7 180 13 178 2.59e-13 68.2
MS.gene012136.t1 MTR_1g082870 28.571 175 115 4 7 180 17 182 3.72e-13 67.8
MS.gene012136.t1 MTR_4g113620 27.966 118 76 3 7 124 14 122 2.09e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene012136.t1 AT2G17800 95.939 197 8 0 1 197 1 197 1.29e-129 362
MS.gene012136.t1 AT2G17800 95.939 197 8 0 1 197 1 197 1.29e-129 362
MS.gene012136.t1 AT3G51300 95.939 197 8 0 1 197 1 197 2.04e-129 362
MS.gene012136.t1 AT4G35950 95.431 197 9 0 1 197 1 197 3.23e-129 361
MS.gene012136.t1 AT4G35020 88.889 198 21 1 1 197 1 198 1.52e-127 357
MS.gene012136.t1 AT4G35020 88.889 198 21 1 1 197 1 198 1.52e-127 357
MS.gene012136.t1 AT4G35020 88.889 198 21 1 1 197 1 198 1.52e-127 357
MS.gene012136.t1 AT1G75840 92.697 178 13 0 1 178 1 178 1.21e-124 350
MS.gene012136.t1 AT1G20090 91.477 176 15 0 3 178 2 177 4.40e-122 343
MS.gene012136.t1 AT5G45970 87.151 179 23 0 1 179 1 179 2.78e-119 336
MS.gene012136.t1 AT5G62880 81.564 179 33 0 2 180 4 182 5.40e-113 321
MS.gene012136.t1 AT3G48040 81.564 179 33 0 2 180 4 182 7.47e-112 318
MS.gene012136.t1 AT4G28950 75.000 200 44 2 1 196 1 198 4.93e-111 316
MS.gene012136.t1 AT2G44690 75.521 192 47 0 6 197 18 209 1.18e-107 307
MS.gene012136.t1 AT5G62880 80.233 172 30 1 2 173 4 171 4.26e-105 300
MS.gene012136.t1 AT3G48040 81.595 163 30 0 2 164 4 166 3.69e-102 292
MS.gene012136.t1 AT3G51290 95.732 164 7 0 34 197 635 798 3.76e-98 301
MS.gene012136.t1 AT4G35020 93.333 120 8 0 1 120 1 120 9.36e-83 242
MS.gene012136.t1 AT4G35020 93.333 120 8 0 1 120 1 120 9.36e-83 242
MS.gene012136.t1 AT3G54840 33.929 168 96 6 7 171 34 189 3.18e-24 94.7
MS.gene012136.t1 AT3G46060 32.934 167 99 6 6 170 15 170 3.43e-24 95.1
MS.gene012136.t1 AT3G46060 32.934 167 99 6 6 170 15 170 3.43e-24 95.1
MS.gene012136.t1 AT3G46060 32.934 167 99 6 6 170 15 170 3.43e-24 95.1
MS.gene012136.t1 AT3G54840 32.738 168 98 5 7 171 34 189 3.48e-24 94.7
MS.gene012136.t1 AT3G54840 32.530 166 97 5 9 171 2 155 1.20e-23 92.4
MS.gene012136.t1 AT1G02130 33.136 169 99 6 6 172 8 164 1.48e-23 93.2
MS.gene012136.t1 AT5G45130 33.939 165 95 4 8 170 12 164 1.98e-23 92.8
MS.gene012136.t1 AT3G53610 31.737 167 101 6 6 170 15 170 4.83e-23 92.0
MS.gene012136.t1 AT3G53610 31.737 167 101 6 6 170 15 170 4.83e-23 92.0
MS.gene012136.t1 AT3G53610 31.737 167 101 6 6 170 15 170 4.83e-23 92.0
MS.gene012136.t1 AT4G19640 33.939 165 95 4 8 170 12 164 5.04e-23 91.7
MS.gene012136.t1 AT5G59840 31.737 167 101 5 6 170 15 170 5.60e-23 92.0
MS.gene012136.t1 AT1G43890 29.474 190 119 5 6 192 13 190 9.10e-23 91.3
MS.gene012136.t1 AT1G43890 29.474 190 119 5 6 192 13 190 9.10e-23 91.3
MS.gene012136.t1 AT1G43890 29.474 190 119 5 6 192 13 190 9.10e-23 91.3
MS.gene012136.t1 AT5G45130 33.742 163 94 4 10 170 22 172 9.68e-23 91.3
MS.gene012136.t1 AT5G03530 29.255 188 118 5 8 192 15 190 1.08e-22 91.3
MS.gene012136.t1 AT5G03530 29.255 188 118 5 8 192 15 190 1.08e-22 91.3
MS.gene012136.t1 AT1G16920 32.418 182 109 6 6 185 13 182 7.59e-22 89.0
MS.gene012136.t1 AT2G44610 33.333 165 96 5 8 170 11 163 1.66e-21 87.8
MS.gene012136.t1 AT4G35860 28.177 181 116 5 1 179 1 169 2.35e-21 87.8
MS.gene012136.t1 AT4G17530 31.551 187 109 7 6 185 8 182 2.59e-21 87.4
MS.gene012136.t1 AT3G11730 30.539 167 102 5 6 170 8 162 4.20e-21 87.0
MS.gene012136.t1 AT4G39890 34.731 167 92 6 8 170 11 164 4.55e-21 87.0
MS.gene012136.t1 AT5G47200 31.868 182 105 7 6 180 8 177 5.83e-21 86.3
MS.gene012136.t1 AT1G09630 34.667 150 88 4 6 146 12 160 1.18e-20 85.9
MS.gene012136.t1 AT4G19640 37.705 122 73 3 8 127 12 132 1.76e-20 84.0
MS.gene012136.t1 AT1G18200 29.834 181 113 5 6 184 13 181 2.24e-20 85.5
MS.gene012136.t1 AT3G09900 31.383 188 116 6 6 191 15 191 2.88e-20 85.1
MS.gene012136.t1 AT4G18430 34.132 167 96 5 6 170 13 167 2.95e-20 84.7
MS.gene012136.t1 AT2G22290 33.333 165 96 5 8 170 11 163 3.01e-20 84.7
MS.gene012136.t1 AT4G17170 27.907 172 110 5 1 170 1 160 3.62e-20 84.3
MS.gene012136.t1 AT4G19640 37.705 122 73 3 8 127 12 132 5.16e-20 83.6
MS.gene012136.t1 AT1G73640 31.492 181 110 5 6 184 13 181 5.23e-20 84.7
MS.gene012136.t1 AT3G07410 31.579 190 116 5 6 193 12 189 5.76e-20 84.0
MS.gene012136.t1 AT2G31680 30.159 189 118 4 6 192 12 188 1.18e-19 83.2
MS.gene012136.t1 AT1G06400 31.892 185 109 6 6 188 13 182 1.19e-19 83.2
MS.gene012136.t1 AT3G12160 33.333 165 96 5 8 170 17 169 1.25e-19 83.2
MS.gene012136.t1 AT2G43130 29.630 189 119 5 6 192 12 188 1.27e-19 83.2
MS.gene012136.t1 AT5G03520 31.383 188 116 6 6 191 15 191 1.54e-19 82.8
MS.gene012136.t1 AT4G17160 26.744 172 112 5 1 170 1 160 1.93e-19 82.4
MS.gene012136.t1 AT4G18800 36.667 120 73 3 6 123 13 131 2.91e-19 82.0
MS.gene012136.t1 AT3G15060 30.726 179 110 5 8 184 15 181 6.81e-19 81.3
MS.gene012136.t1 AT5G10260 32.121 165 98 5 8 170 11 163 1.10e-18 80.5
MS.gene012136.t1 AT1G05810 30.159 189 118 5 6 192 12 188 1.24e-18 80.5
MS.gene012136.t1 AT3G18820 30.108 186 115 6 6 185 8 184 1.27e-18 80.5
MS.gene012136.t1 AT1G05810 30.159 189 118 5 6 192 58 234 1.55e-18 81.3
MS.gene012136.t1 AT5G45750 35.833 120 74 3 6 123 13 131 1.96e-18 80.1
MS.gene012136.t1 AT5G60860 29.834 181 113 5 6 184 13 181 2.15e-18 80.1
MS.gene012136.t1 AT5G64990 33.333 165 96 5 8 170 9 161 3.27e-18 79.3
MS.gene012136.t1 AT1G01200 34.337 166 94 6 8 170 30 183 5.43e-18 79.3
MS.gene012136.t1 AT5G47520 28.652 178 113 5 2 177 10 175 8.12e-18 78.6
MS.gene012136.t1 AT1G28550 36.667 120 73 3 6 123 13 131 1.23e-17 77.8
MS.gene012136.t1 AT1G07410 35.294 119 74 3 6 122 12 129 2.12e-17 77.4
MS.gene012136.t1 AT5G59150 29.825 171 106 6 6 174 12 170 2.21e-17 77.4
MS.gene012136.t1 AT2G21880 27.717 184 120 4 6 184 9 184 2.65e-17 77.0
MS.gene012136.t1 AT4G39990 28.495 186 117 6 8 190 19 191 4.05e-17 76.6
MS.gene012136.t1 AT2G33870 36.975 119 72 3 6 122 13 130 4.28e-17 76.6
MS.gene012136.t1 AT5G47960 34.188 117 74 3 8 122 17 132 4.51e-17 76.6
MS.gene012136.t1 AT5G65270 28.889 180 112 6 8 184 19 185 7.80e-17 75.9
MS.gene012136.t1 AT1G22740 28.646 192 120 6 1 184 1 183 9.44e-17 75.5
MS.gene012136.t1 AT3G46830 33.613 119 76 3 6 122 12 129 2.57e-16 74.3
MS.gene012136.t1 AT3G46830 33.613 119 76 3 6 122 12 129 2.57e-16 74.3
MS.gene012136.t1 AT1G52280 30.726 179 107 7 1 171 1 170 3.16e-16 73.9
MS.gene012136.t1 AT5G27540 25.862 174 121 2 7 180 18 183 3.52e-16 76.3
MS.gene012136.t1 AT5G27540 25.862 174 121 2 7 180 18 183 3.52e-16 76.3
MS.gene012136.t1 AT3G16100 29.016 193 120 7 1 185 1 184 6.39e-16 73.2
MS.gene012136.t1 AT4G09720 30.994 171 103 6 6 170 8 169 1.32e-15 72.4
MS.gene012136.t1 AT5G64990 31.977 172 96 6 8 170 9 168 1.44e-15 72.4
MS.gene012136.t1 AT3G09910 28.249 177 112 5 8 181 15 179 1.70e-15 72.0
MS.gene012136.t1 AT3G09910 28.249 177 112 5 8 181 15 179 1.70e-15 72.0
MS.gene012136.t1 AT3G09910 28.249 177 112 5 8 181 15 179 1.70e-15 72.0
MS.gene012136.t1 AT1G49300 30.409 171 104 6 6 170 8 169 3.01e-15 71.2
MS.gene012136.t1 AT1G49300 30.409 171 104 6 6 170 8 169 3.01e-15 71.2
MS.gene012136.t1 AT5G55080 30.769 117 79 2 7 122 14 129 3.31e-15 71.6
MS.gene012136.t1 AT3G09910 28.889 180 110 6 8 181 15 182 1.10e-14 69.7
MS.gene012136.t1 AT3G09910 28.889 180 110 6 8 181 15 182 1.10e-14 69.7
MS.gene012136.t1 AT3G63150 30.114 176 111 6 7 180 15 180 2.44e-14 71.2
MS.gene012136.t1 AT5G20020 28.485 165 103 4 7 170 14 164 2.69e-14 68.9
MS.gene012136.t1 AT4G09720 28.977 176 105 5 6 170 8 174 3.28e-14 68.6
MS.gene012136.t1 AT5G55190 28.485 165 103 4 7 170 14 164 3.37e-14 68.9
MS.gene012136.t1 AT5G20010 28.485 165 103 4 7 170 14 164 3.74e-14 68.6
MS.gene012136.t1 AT4G09720 28.022 182 105 5 6 170 8 180 2.66e-13 66.2
MS.gene012136.t1 AT5G03520 30.137 146 90 5 47 191 47 181 3.17e-13 65.9
MS.gene012136.t1 AT5G39620 27.322 183 118 5 7 183 6 179 6.75e-13 65.1
MS.gene012136.t1 AT4G35860 26.119 134 86 4 47 179 2 123 2.09e-12 62.8
MS.gene012136.t1 AT2G21880 25.749 167 111 4 23 184 1 159 5.43e-11 59.3
MS.gene012136.t1 AT2G21880 25.749 167 111 4 23 184 1 159 5.43e-11 59.3

Find 43 sgRNAs with CRISPR-Local

Find 197 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCACTGTGAATCTGGGTTTA+TGG 0.186099 8.4:-29902194 MS.gene012136:CDS
TTATGAAAATGTTTCTAAAA+AGG 0.255465 8.4:-29901992 MS.gene012136:intron
CTTTGTGCCAACCAGAATAA+TGG 0.304891 8.4:+29901756 None:intergenic
GAAAGAAGATGAGCGCTTCT+AGG 0.324588 8.4:-29903265 None:intergenic
CACTGTGAATCTGGGTTTAT+GGG 0.333768 8.4:-29902193 MS.gene012136:CDS
ACCTGGTGTTCCCATTATTC+TGG 0.347919 8.4:-29901767 MS.gene012136:CDS
GAATGGAAGCACTGTGAATC+TGG 0.355358 8.4:-29902202 MS.gene012136:CDS
TTCACCTGAGCGGTGGTAAT+AGG 0.380693 8.4:+29900250 None:intergenic
TGGTTGAAGGACAACTCTTA+TGG 0.386728 8.4:+29899934 None:intergenic
TCATCAAGTGTGTTACTGTT+GGG 0.391822 8.4:-29903241 MS.gene012136:CDS
AAAGAAGAGTAAAGCTCAAA+AGG 0.404647 8.4:-29899897 MS.gene012136:CDS
TTGAAATGAGACAGACCTTC+GGG 0.407866 8.4:-29900311 MS.gene012136:intron
CACAGTGGGGAAGGTATTGC+TGG 0.423554 8.4:+29903178 None:intergenic
TTTGTGCCAACCAGAATAAT+GGG 0.430326 8.4:+29901757 None:intergenic
AGTGCAAATGTGGTTGTGAA+TGG 0.466304 8.4:-29902219 MS.gene012136:CDS
TTCATCAAGTGTGTTACTGT+TGG 0.472314 8.4:-29903242 MS.gene012136:CDS
ATTCTGGTTGGCACAAAGCT+TGG 0.474465 8.4:-29901751 MS.gene012136:intron
GGTGCATAATGCTTCAACTC+TGG 0.481713 8.4:+29901787 None:intergenic
CAGTTCTTTGTCGACCATCC+TGG 0.485725 8.4:-29900280 MS.gene012136:CDS
AGCAAATCACAATATCGAAC+AGG 0.488579 8.4:+29899874 None:intergenic
GAACTGCATTCAATATAAGC+AGG 0.495522 8.4:+29900089 None:intergenic
GGTGTTCCCATTATTCTGGT+TGG 0.501900 8.4:-29901763 MS.gene012136:CDS
TCTTGAAGGGAGAAGAGCTC+AGG 0.509266 8.4:-29900127 MS.gene012136:intron
CGCTTTCTCACTCATAAGCA+AGG 0.527969 8.4:-29902019 MS.gene012136:CDS
TTTGAAATGAGACAGACCTT+CGG 0.532190 8.4:-29900312 MS.gene012136:intron
CTGAAATTGTCGAAGACAGT+TGG 0.537778 8.4:+29902240 None:intergenic
TGTTCCTATTACCACCGCTC+AGG 0.553664 8.4:-29900254 MS.gene012136:intron
CGACAATTTCAGTGCAAATG+TGG 0.560089 8.4:-29902229 MS.gene012136:CDS
ACTGTTGGGGATGGAGCTGT+TGG 0.567138 8.4:-29903227 MS.gene012136:CDS
CTGGGTTTATGGGACACTGC+AGG 0.572114 8.4:-29902183 MS.gene012136:intron
CACAATATTCACCTGAGCGG+TGG 0.588643 8.4:+29900243 None:intergenic
CATCAAGTGTGTTACTGTTG+GGG 0.592671 8.4:-29903240 MS.gene012136:CDS
TTAAGACCTTTGAGTTATCG+TGG 0.598742 8.4:-29902060 MS.gene012136:CDS
ATGCAGTTCAAAATCACAGC+AGG 0.601412 8.4:-29900075 MS.gene012136:intron
AATGGAAGCACTGTGAATCT+GGG 0.602680 8.4:-29902201 MS.gene012136:CDS
AAGTGTGTTACTGTTGGGGA+TGG 0.603907 8.4:-29903236 MS.gene012136:CDS
GAGTTGAAGCATTATGCACC+TGG 0.616427 8.4:-29901784 MS.gene012136:CDS
ACCAGAATAATGGGAACACC+AGG 0.622688 8.4:+29901766 None:intergenic
GTGGTAATAGGAACAGCACC+AGG 0.638537 8.4:+29900262 None:intergenic
TAATAGGAACAGCACCAGGA+TGG 0.658624 8.4:+29900266 None:intergenic
AGAACTGCTTGTCATCCCGA+AGG 0.663377 8.4:+29900296 None:intergenic
TCAGCACCACGATAACTCAA+AGG 0.665908 8.4:+29902054 None:intergenic
AAACACAATATTCACCTGAG+CGG 0.759772 8.4:+29900240 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAAGAATTATCAATAA+TGG + chr8.4:29901749-29901768 None:intergenic 10.0%
!! TAAAAAGAATTATCAATAAT+GGG + chr8.4:29901748-29901767 None:intergenic 10.0%
!! TAAACAAAAACAAATAAAAA+GGG + chr8.4:29900636-29900655 None:intergenic 10.0%
!! TTAAACAAAAACAAATAAAA+AGG + chr8.4:29900637-29900656 None:intergenic 10.0%
!! AAACAAAAACAAATAAAAAG+GGG + chr8.4:29900635-29900654 None:intergenic 15.0%
!! AGTATTTGACATTAATTAAA+AGG - chr8.4:29902618-29902637 MS.gene012136:intron 15.0%
!! ATAAGAAGATTAAAAAGAAA+AGG + chr8.4:29900000-29900019 None:intergenic 15.0%
!! GTATTTGACATTAATTAAAA+GGG - chr8.4:29902619-29902638 MS.gene012136:intron 15.0%
!! TAAGAAGATTAAAAAGAAAA+GGG + chr8.4:29899999-29900018 None:intergenic 15.0%
!! TTAAAAAAAAGAAGTAGAAT+AGG + chr8.4:29901618-29901637 None:intergenic 15.0%
!!! AGTAATTTGGATTTATTTTT+TGG - chr8.4:29900057-29900076 MS.gene012136:intron 15.0%
!!! ATATTCCAAGATATTTTATA+TGG - chr8.4:29902267-29902286 MS.gene012136:intron 15.0%
!!! CAAATGAAATAATTAGATTT+TGG - chr8.4:29900733-29900752 MS.gene012136:intron 15.0%
!!! TTATGAAAATGTTTCTAAAA+AGG - chr8.4:29901145-29901164 MS.gene012136:intron 15.0%
!! AAAACTGCTTATAACTTATA+GGG - chr8.4:29902051-29902070 MS.gene012136:CDS 20.0%
!! AAAATTACAATGAATGATGT+GGG - chr8.4:29900693-29900712 MS.gene012136:intron 20.0%
!! AAACATGAGAAAATTGAATT+TGG - chr8.4:29900276-29900295 MS.gene012136:CDS 20.0%
!! AAATACTTGTGAGATTATTT+GGG - chr8.4:29901950-29901969 MS.gene012136:intron 20.0%
!! AGTATGAAAACAAATTAACA+AGG + chr8.4:29902929-29902948 None:intergenic 20.0%
!! CAAATATAGAAATACTATCT+TGG - chr8.4:29901536-29901555 MS.gene012136:intron 20.0%
!! GAATTGAAATTTCAGTAATT+TGG - chr8.4:29900044-29900063 MS.gene012136:intron 20.0%
!! TAAATACTTGTGAGATTATT+TGG - chr8.4:29901949-29901968 MS.gene012136:intron 20.0%
!! TAGTTATAAATGTTGACATT+TGG - chr8.4:29900145-29900164 MS.gene012136:intron 20.0%
!! TGAAAATTATCTCAATTCAA+AGG - chr8.4:29900328-29900347 MS.gene012136:intron 20.0%
!! TTATGTGTTATCGAATTAAT+TGG - chr8.4:29900022-29900041 MS.gene012136:intron 20.0%
!!! AAAAGTGCATTTTAAAAACA+TGG + chr8.4:29901212-29901231 None:intergenic 20.0%
!!! AAAGTGCATTTTAAAAACAT+GGG + chr8.4:29901211-29901230 None:intergenic 20.0%
!!! AAGTTGTTACTTTAGAATTT+TGG - chr8.4:29902559-29902578 MS.gene012136:intron 20.0%
!!! AATGTTTTTCAAAACAGTTA+TGG - chr8.4:29902153-29902172 MS.gene012136:intron 20.0%
!!! ATAACTGTTTTGAAAAACAT+TGG + chr8.4:29902154-29902173 None:intergenic 20.0%
!!! ATTAGTTAACAAGTGTTTTA+AGG - chr8.4:29901637-29901656 MS.gene012136:intron 20.0%
!!! CAACATCTAAAACTTAAATA+AGG + chr8.4:29902363-29902382 None:intergenic 20.0%
!!! CAAGATAGTATTTCTATATT+TGG + chr8.4:29901538-29901557 None:intergenic 20.0%
!!! TATTGTTTTTCTTTTGAAAC+AGG - chr8.4:29901035-29901054 MS.gene012136:intron 20.0%
!!! TTAGTTAACAAGTGTTTTAA+GGG - chr8.4:29901638-29901657 MS.gene012136:intron 20.0%
!!! TTATTGTTATGATCGTTTTT+GGG - chr8.4:29900085-29900104 MS.gene012136:CDS 20.0%
!!! TTTAGAAACATTTTCATAAC+TGG + chr8.4:29901144-29901163 None:intergenic 20.0%
! AAACCACACATTCATATAAA+AGG + chr8.4:29901243-29901262 None:intergenic 25.0%
! AAATGAAAGCTTATAAGAGA+AGG + chr8.4:29901881-29901900 None:intergenic 25.0%
! AACCACACATTCATATAAAA+GGG + chr8.4:29901242-29901261 None:intergenic 25.0%
! AATGAAAGCTTATAAGAGAA+GGG + chr8.4:29901880-29901899 None:intergenic 25.0%
! CATATATGATAATAAGGCAT+TGG + chr8.4:29900805-29900824 None:intergenic 25.0%
! GAAAACTGCTTATAACTTAT+AGG - chr8.4:29902050-29902069 MS.gene012136:CDS 25.0%
! GAAAATTACAATGAATGATG+TGG - chr8.4:29900692-29900711 MS.gene012136:intron 25.0%
! GACATTAATTAAAAGGGAAA+TGG - chr8.4:29902625-29902644 MS.gene012136:intron 25.0%
! GGAATATATAGAAACAAGAA+AGG + chr8.4:29902254-29902273 None:intergenic 25.0%
! GTTTAACCCCAAATAATAAA+AGG + chr8.4:29900482-29900501 None:intergenic 25.0%
! TAAGCTTTCATTTCAATTCA+AGG - chr8.4:29901888-29901907 MS.gene012136:intron 25.0%
! TACAATATCAGATGTTACAT+TGG + chr8.4:29901427-29901446 None:intergenic 25.0%
! TCTTTATAAACTGGAATGAA+TGG - chr8.4:29901262-29901281 MS.gene012136:intron 25.0%
! TGGAAGAATAAAAAACTGTT+TGG + chr8.4:29902134-29902153 None:intergenic 25.0%
! TTATAAGAGAAGGGAAAAAA+AGG + chr8.4:29901871-29901890 None:intergenic 25.0%
! TTCAAATCACAAGATAGTTA+AGG + chr8.4:29902811-29902830 None:intergenic 25.0%
! TTCTAGCGTATAAACTAATA+AGG - chr8.4:29901473-29901492 MS.gene012136:intron 25.0%
!! AGATTTTCATATCTTCTTGA+AGG - chr8.4:29902996-29903015 MS.gene012136:intron 25.0%
!! ATGAAAACCAACTCAATTTT+CGG + chr8.4:29900184-29900203 None:intergenic 25.0%
!! ATGTTTCAAGCTTTTAGATT+TGG - chr8.4:29900513-29900532 MS.gene012136:intron 25.0%
!! CCAAGATATTTTATATGGTA+GGG - chr8.4:29902272-29902291 MS.gene012136:intron 25.0%
!! GATTTTCATATCTTCTTGAA+GGG - chr8.4:29902997-29903016 MS.gene012136:intron 25.0%
!! GGTTCATCCTTTTATTATTT+GGG - chr8.4:29900472-29900491 MS.gene012136:intron 25.0%
!! GTTATTGTTATGATCGTTTT+TGG - chr8.4:29900084-29900103 MS.gene012136:CDS 25.0%
!! GTTCATCCTTTTATTATTTG+GGG - chr8.4:29900473-29900492 MS.gene012136:intron 25.0%
!! TCCAAGATATTTTATATGGT+AGG - chr8.4:29902271-29902290 MS.gene012136:intron 25.0%
!! TGGTTCATCCTTTTATTATT+TGG - chr8.4:29900471-29900490 MS.gene012136:intron 25.0%
!! TTATTAGTTTATACGCTAGA+AGG + chr8.4:29901474-29901493 None:intergenic 25.0%
!! TTTTATCGCAAAAACTTCAA+AGG + chr8.4:29900549-29900568 None:intergenic 25.0%
!!! ATATGGTCTTGTTTTTTTGT+TGG - chr8.4:29902220-29902239 MS.gene012136:CDS 25.0%
!!! GTTACTTTAGAATTTTGGTT+TGG - chr8.4:29902564-29902583 MS.gene012136:intron 25.0%
AAAATGAAAAAGCTCACAGT+GGG + chr8.4:29899976-29899995 None:intergenic 30.0%
AAAGAAGAGTAAAGCTCAAA+AGG - chr8.4:29903240-29903259 MS.gene012136:CDS 30.0%
AACAGTAAAAGAACATGCAA+AGG + chr8.4:29902769-29902788 None:intergenic 30.0%
AAGTTACTCTTTAGTAAGAC+TGG + chr8.4:29901792-29901811 None:intergenic 30.0%
ACATATTTGAGCTTATCTAC+TGG - chr8.4:29901924-29901943 MS.gene012136:intron 30.0%
ACCTATTAAGGTGAATAAGT+GGG - chr8.4:29900378-29900397 MS.gene012136:intron 30.0%
AGAATCTAATGACATGTAGA+AGG + chr8.4:29900771-29900790 None:intergenic 30.0%
AGCGCACATATATGATAATA+AGG + chr8.4:29900811-29900830 None:intergenic 30.0%
ATGTTTACCGAAAATTGAGT+TGG - chr8.4:29900174-29900193 MS.gene012136:intron 30.0%
ATTTATTTCGAATGTTTGCG+TGG - chr8.4:29900251-29900270 MS.gene012136:intron 30.0%
ATTTCAATTCAAGGTCTCTT+TGG - chr8.4:29901897-29901916 MS.gene012136:intron 30.0%
CCCTACCATATAAAATATCT+TGG + chr8.4:29902275-29902294 None:intergenic 30.0%
TCTCCAAATAGAGCAAAAAA+TGG + chr8.4:29902717-29902736 None:intergenic 30.0%
TGAACTTATGAACACAACTT+TGG - chr8.4:29901973-29901992 MS.gene012136:intron 30.0%
TGTGTGGTTTCTTTATAAAC+TGG - chr8.4:29901253-29901272 MS.gene012136:intron 30.0%
TTCTACATGTCATTAGATTC+TGG - chr8.4:29900770-29900789 MS.gene012136:intron 30.0%
! AGTTTTTGCGATAAAAGATG+AGG - chr8.4:29900553-29900572 MS.gene012136:intron 30.0%
! CTCTTCTTTTTCTTTTGCTT+TGG + chr8.4:29903229-29903248 None:intergenic 30.0%
! TGATGAATTCAACTTCCTTT+TGG - chr8.4:29902401-29902420 MS.gene012136:intron 30.0%
! TTCCCTTTTATATGAATGTG+TGG - chr8.4:29901237-29901256 MS.gene012136:intron 30.0%
! TTCTTTTTCTTTTGCTTTGG+TGG + chr8.4:29903226-29903245 None:intergenic 30.0%
! TTGCATCTTTTCACTTTGTT+TGG - chr8.4:29900859-29900878 MS.gene012136:intron 30.0%
!! GAATTATCAATAATGGGTCA+TGG + chr8.4:29901742-29901761 None:intergenic 30.0%
!! TTTTAAAAACATGGGACACA+AGG + chr8.4:29901203-29901222 None:intergenic 30.0%
!! TTTTCACTTTGTTTGGAAAC+AGG - chr8.4:29900866-29900885 MS.gene012136:intron 30.0%
!!! ATGCCATTTTTTGCTCTATT+TGG - chr8.4:29902711-29902730 MS.gene012136:intron 30.0%
AAACACAATATTCACCTGAG+CGG + chr8.4:29902900-29902919 None:intergenic 35.0%
AAAGAGTAACTTCTTGCTTC+CGG - chr8.4:29901800-29901819 MS.gene012136:intron 35.0%
AAATGAAAAAGCTCACAGTG+GGG + chr8.4:29899975-29899994 None:intergenic 35.0%
AAGCTTGGTAAGTCTATTTC+TGG - chr8.4:29901401-29901420 MS.gene012136:intron 35.0%
AGGGAAATGGTCATTAATGA+TGG - chr8.4:29902638-29902657 MS.gene012136:intron 35.0%
CACCTATTAAGGTGAATAAG+TGG - chr8.4:29900377-29900396 MS.gene012136:intron 35.0%
CATGCATGTGAATCAAATCA+AGG + chr8.4:29900597-29900616 None:intergenic 35.0%
CCTATTAAGGTGAATAAGTG+GGG - chr8.4:29900379-29900398 MS.gene012136:intron 35.0%
CTTTCTTGTCTCTCTCTATA+TGG - chr8.4:29902203-29902222 MS.gene012136:CDS 35.0%
GAAAATGAAAAAGCTCACAG+TGG + chr8.4:29899977-29899996 None:intergenic 35.0%
GAACTGCATTCAATATAAGC+AGG + chr8.4:29903051-29903070 None:intergenic 35.0%
GCACTGTGTACATTGTAAAA+AGG + chr8.4:29901002-29901021 None:intergenic 35.0%
GGCTAGAAATTCACCTATTA+AGG - chr8.4:29900366-29900385 MS.gene012136:intron 35.0%
GTTTCTTAACATGTGCCTTT+GGG + chr8.4:29901516-29901535 None:intergenic 35.0%
TCAGGTGAATATTGTGTTTC+TGG - chr8.4:29902901-29902920 MS.gene012136:intron 35.0%
TTTCTTAACATGTGCCTTTG+GGG + chr8.4:29901515-29901534 None:intergenic 35.0%
TTTGTGCCAACCAGAATAAT+GGG + chr8.4:29901383-29901402 None:intergenic 35.0%
! GATGAGGATATCAGTGTTTT+TGG - chr8.4:29900569-29900588 MS.gene012136:intron 35.0%
! TCATCAAGTGTGTTACTGTT+GGG - chr8.4:29899896-29899915 MS.gene012136:CDS 35.0%
! TTAAGACCTTTGAGTTATCG+TGG - chr8.4:29901077-29901096 MS.gene012136:intron 35.0%
! TTCATCAAGTGTGTTACTGT+TGG - chr8.4:29899895-29899914 MS.gene012136:CDS 35.0%
! TTGAATTTGGAATGTTTGCG+TGG - chr8.4:29900289-29900308 MS.gene012136:CDS 35.0%
! TTTGAAATGAGACAGACCTT+CGG - chr8.4:29902825-29902844 MS.gene012136:intron 35.0%
!! TTGTTATGATCGTTTTTGGG+TGG - chr8.4:29900088-29900107 MS.gene012136:CDS 35.0%
!!! CATTTTTAGTGAGAATGACG+TGG + chr8.4:29902594-29902613 None:intergenic 35.0%
!!! TTCTTTTGAAACAGGACAAG+AGG - chr8.4:29901043-29901062 MS.gene012136:intron 35.0%
!!! TTTTGGTTTCTTCTTGACAC+CGG - chr8.4:29902418-29902437 MS.gene012136:intron 35.0%
AACTTCTTGCTTCCGGTAAA+GGG - chr8.4:29901807-29901826 MS.gene012136:intron 40.0%
AATGATGGCATGATGCAGTA+TGG - chr8.4:29902653-29902672 MS.gene012136:intron 40.0%
AATGTTAACATGTGCCCCAA+AGG - chr8.4:29901498-29901517 MS.gene012136:intron 40.0%
ACTTTCTAGACGCAAGTACA+TGG + chr8.4:29902500-29902519 None:intergenic 40.0%
AGTGCAAATGTGGTTGTGAA+TGG - chr8.4:29900918-29900937 MS.gene012136:intron 40.0%
ATGCAGTTCAAAATCACAGC+AGG - chr8.4:29903062-29903081 MS.gene012136:intron 40.0%
ATGTTGCAATATGTAGGAGC+CGG + chr8.4:29900422-29900441 None:intergenic 40.0%
CAAAGGAAACTCTAGTCTAG+TGG - chr8.4:29900345-29900364 MS.gene012136:intron 40.0%
CACTGTGAATCTGGGTTTAT+GGG - chr8.4:29900944-29900963 MS.gene012136:intron 40.0%
CATAAACTCTGACACACAGT+GGG + chr8.4:29901178-29901197 None:intergenic 40.0%
CCCCACTTATTCACCTTAAT+AGG + chr8.4:29900382-29900401 None:intergenic 40.0%
CGACAATTTCAGTGCAAATG+TGG - chr8.4:29900908-29900927 MS.gene012136:intron 40.0%
CTGAAATTGTCGAAGACAGT+TGG + chr8.4:29900900-29900919 None:intergenic 40.0%
CTTTGTGCCAACCAGAATAA+TGG + chr8.4:29901384-29901403 None:intergenic 40.0%
GGTGTCAAGAAGAAACCAAA+AGG + chr8.4:29902419-29902438 None:intergenic 40.0%
GGTTTCTTAACATGTGCCTT+TGG + chr8.4:29901517-29901536 None:intergenic 40.0%
GTAGGGATGTTGCAATATGT+AGG + chr8.4:29900428-29900447 None:intergenic 40.0%
GTCATTAGATTCTGGCATTG+TGG - chr8.4:29900778-29900797 MS.gene012136:intron 40.0%
TAACTTCTTGCTTCCGGTAA+AGG - chr8.4:29901806-29901825 MS.gene012136:intron 40.0%
TCTTCTTGACACCGGATAAA+AGG - chr8.4:29902426-29902445 MS.gene012136:intron 40.0%
TGAGCATAGCTCAATTGGTA+GGG + chr8.4:29900445-29900464 None:intergenic 40.0%
TGGCATGCAAGTTATTCACA+TGG + chr8.4:29902697-29902716 None:intergenic 40.0%
TGGTTGAAGGACAACTCTTA+TGG + chr8.4:29903206-29903225 None:intergenic 40.0%
TGTACTTGCGTCTAGAAAGT+AGG - chr8.4:29902500-29902519 MS.gene012136:intron 40.0%
TGTTACCTTCTTGTACACGA+CGG - chr8.4:29903102-29903121 MS.gene012136:intron 40.0%
TTGAAATGAGACAGACCTTC+GGG - chr8.4:29902826-29902845 MS.gene012136:intron 40.0%
TTGCGTCTAGAAAGTAGGAA+GGG - chr8.4:29902505-29902524 MS.gene012136:intron 40.0%
! ACTGCCTAATGCCTTTTATC+CGG + chr8.4:29902440-29902459 None:intergenic 40.0%
! CATCAAGTGTGTTACTGTTG+GGG - chr8.4:29899897-29899916 MS.gene012136:CDS 40.0%
!! AATGGAAGCACTGTGAATCT+GGG - chr8.4:29900936-29900955 MS.gene012136:intron 40.0%
!! TCTTTTGCTTTGGTGGTTGA+AGG + chr8.4:29903219-29903238 None:intergenic 40.0%
ACAATGTACACAGTGCTGTC+TGG - chr8.4:29901006-29901025 MS.gene012136:intron 45.0%
ACCAATTGAGCTATGCTCAC+AGG - chr8.4:29900446-29900465 MS.gene012136:intron 45.0%
ACCTGGTGTTCCCATTATTC+TGG - chr8.4:29901370-29901389 MS.gene012136:intron 45.0%
ACTTCTTGCTTCCGGTAAAG+GGG - chr8.4:29901808-29901827 MS.gene012136:intron 45.0%
AGGTGAATAAGTGGGGAATC+CGG - chr8.4:29900386-29900405 MS.gene012136:intron 45.0%
CGCTTTCTCACTCATAAGCA+AGG - chr8.4:29901118-29901137 MS.gene012136:intron 45.0%
CTTAACCGTCGTGTACAAGA+AGG + chr8.4:29903110-29903129 None:intergenic 45.0%
CTTGCGTCTAGAAAGTAGGA+AGG - chr8.4:29902504-29902523 MS.gene012136:intron 45.0%
GCACTGTGAATCTGGGTTTA+TGG - chr8.4:29900943-29900962 MS.gene012136:intron 45.0%
GCATAAACTCTGACACACAG+TGG + chr8.4:29901179-29901198 None:intergenic 45.0%
GGTGCATAATGCTTCAACTC+TGG + chr8.4:29901353-29901372 None:intergenic 45.0%
GGTGTTCCCATTATTCTGGT+TGG - chr8.4:29901374-29901393 MS.gene012136:intron 45.0%
GTAAAGGGGTGAACTGTGAA+GGG - chr8.4:29901822-29901841 MS.gene012136:intron 45.0%
GTGAGCATAGCTCAATTGGT+AGG + chr8.4:29900446-29900465 None:intergenic 45.0%
TAATAGGAACAGCACCAGGA+TGG + chr8.4:29902874-29902893 None:intergenic 45.0%
TCAGCACCACGATAACTCAA+AGG + chr8.4:29901086-29901105 None:intergenic 45.0%
TCCTGTGAGCATAGCTCAAT+TGG + chr8.4:29900450-29900469 None:intergenic 45.0%
TGTTGCAATATGTAGGAGCC+GGG + chr8.4:29900421-29900440 None:intergenic 45.0%
TTCACAGTTCACCCCTTTAC+CGG + chr8.4:29901822-29901841 None:intergenic 45.0%
! AAGTGTGTTACTGTTGGGGA+TGG - chr8.4:29899901-29899920 MS.gene012136:CDS 45.0%
! ACCAGAATAATGGGAACACC+AGG + chr8.4:29901374-29901393 None:intergenic 45.0%
! ATTCTGGTTGGCACAAAGCT+TGG - chr8.4:29901386-29901405 MS.gene012136:intron 45.0%
! GAGTTGAAGCATTATGCACC+TGG - chr8.4:29901353-29901372 MS.gene012136:intron 45.0%
!! GAATGGAAGCACTGTGAATC+TGG - chr8.4:29900935-29900954 MS.gene012136:intron 45.0%
!! GACACCGGATAAAAGGCATT+AGG - chr8.4:29902433-29902452 MS.gene012136:intron 45.0%
ACGTGCTGTCTCATTTCCAG+TGG - chr8.4:29901324-29901343 MS.gene012136:intron 50.0%
AGAACTGCTTGTCATCCCGA+AGG + chr8.4:29902844-29902863 None:intergenic 50.0%
CACAATATTCACCTGAGCGG+TGG + chr8.4:29902897-29902916 None:intergenic 50.0%
CAGTTCTTTGTCGACCATCC+TGG - chr8.4:29902857-29902876 MS.gene012136:intron 50.0%
GAAAAAGCTCACAGTGGGGA+AGG + chr8.4:29899971-29899990 None:intergenic 50.0%
GGTAAAGGGGTGAACTGTGA+AGG - chr8.4:29901821-29901840 MS.gene012136:intron 50.0%
GGTGAATAAGTGGGGAATCC+GGG - chr8.4:29900387-29900406 MS.gene012136:intron 50.0%
GTGAATAAGTGGGGAATCCG+GGG - chr8.4:29900388-29900407 MS.gene012136:intron 50.0%
GTGGTAATAGGAACAGCACC+AGG + chr8.4:29902878-29902897 None:intergenic 50.0%
GTTGCAATATGTAGGAGCCG+GGG + chr8.4:29900420-29900439 None:intergenic 50.0%
TCTTGAAGGGAGAAGAGCTC+AGG - chr8.4:29903010-29903029 MS.gene012136:intron 50.0%
TGTTCCTATTACCACCGCTC+AGG - chr8.4:29902883-29902902 MS.gene012136:intron 50.0%
TTCACCTGAGCGGTGGTAAT+AGG + chr8.4:29902890-29902909 None:intergenic 50.0%
TTGAGCTATGCTCACAGGAC+TGG - chr8.4:29900451-29900470 MS.gene012136:intron 50.0%
!! GCTTCAACTCTGGAATCCAC+TGG + chr8.4:29901343-29901362 None:intergenic 50.0%
ACTGTTGGGGATGGAGCTGT+TGG - chr8.4:29899910-29899929 MS.gene012136:CDS 55.0%
CTGGGTTTATGGGACACTGC+AGG - chr8.4:29900954-29900973 MS.gene012136:intron 55.0%
!! CACAGTGGGGAAGGTATTGC+TGG + chr8.4:29899962-29899981 None:intergenic 55.0%
GGAATCCGGGGTTTGAACCC+CGG - chr8.4:29900400-29900419 MS.gene012136:intron 60.0%
AGGAGCCGGGGTTCAAACCC+CGG + chr8.4:29900408-29900427 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 29899880 29903279 29899880 ID=MS.gene012136
chr8.4 mRNA 29899880 29903279 29899880 ID=MS.gene012136.t1;Parent=MS.gene012136
chr8.4 exon 29903181 29903279 29903181 ID=MS.gene012136.t1.exon1;Parent=MS.gene012136.t1
chr8.4 CDS 29903181 29903279 29903181 ID=cds.MS.gene012136.t1;Parent=MS.gene012136.t1
chr8.4 exon 29902184 29902271 29902184 ID=MS.gene012136.t1.exon2;Parent=MS.gene012136.t1
chr8.4 CDS 29902184 29902271 29902184 ID=cds.MS.gene012136.t1;Parent=MS.gene012136.t1
chr8.4 exon 29901993 29902102 29901993 ID=MS.gene012136.t1.exon3;Parent=MS.gene012136.t1
chr8.4 CDS 29901993 29902102 29901993 ID=cds.MS.gene012136.t1;Parent=MS.gene012136.t1
chr8.4 exon 29901752 29901815 29901752 ID=MS.gene012136.t1.exon4;Parent=MS.gene012136.t1
chr8.4 CDS 29901752 29901815 29901752 ID=cds.MS.gene012136.t1;Parent=MS.gene012136.t1
chr8.4 exon 29900255 29900319 29900255 ID=MS.gene012136.t1.exon5;Parent=MS.gene012136.t1
chr8.4 CDS 29900255 29900319 29900255 ID=cds.MS.gene012136.t1;Parent=MS.gene012136.t1
chr8.4 exon 29900076 29900141 29900076 ID=MS.gene012136.t1.exon6;Parent=MS.gene012136.t1
chr8.4 CDS 29900076 29900141 29900076 ID=cds.MS.gene012136.t1;Parent=MS.gene012136.t1
chr8.4 exon 29899880 29899981 29899880 ID=MS.gene012136.t1.exon7;Parent=MS.gene012136.t1
chr8.4 CDS 29899880 29899981 29899880 ID=cds.MS.gene012136.t1;Parent=MS.gene012136.t1
Gene Sequence

>MS.gene012136

ATGAGCGCTTCTAGGTTCATCAAGTGTGTTACTGTTGGGGATGGAGCTGTTGGTAAAACTTGTTTGCTTATTTCATACACCAGCAATACCTTCCCCACTGTGAGCTTTTTCATTTTCCCTTTTCTTTTTAATCTTCTTATGTTTATGTGTTATCGAATTAATTGGAATTGAAATTTCAGTAATTTGGATTTATTTTTTGGTGTTGTTATTGTTATGATCGTTTTTGGGTGGTGTTATGATTGTTGAATTCTAGCTATGAGAAATTTAGTTATAAATGTTGACATTTGGTTAATGATGTTTACCGAAAATTGAGTTGGTTTTCATTTTTTGTTTTAAAGAAACTTACATTTTGAGATGTAACAATTGACTTAATTTATTTCGAATGTTTGCGTGGTTAAACATGAGAAAATTGAATTTGGAATGTTTGCGTGGCAAAACATGAGAAAATTGAAAATTATCTCAATTCAAAGGAAACTCTAGTCTAGTGGCTAGAAATTCACCTATTAAGGTGAATAAGTGGGGAATCCGGGGTTTGAACCCCGGCTCCTACATATTGCAACATCCCTACCAATTGAGCTATGCTCACAGGACTGGTTCATCCTTTTATTATTTGGGGTTAAACATATTTGTAGAATGTTTCAAGCTTTTAGATTTGGTAATTTGTTTCCTTTGAAGTTTTTGCGATAAAAGATGAGGATATCAGTGTTTTTGGTGCCTTGATTTGATTCACATGCATGCAGTGTTGTGATCTTCCCCTTTTTATTTGTTTTTGTTTAAATTCTTCAATTTTTTTGTATGTTTTTTAAGAGTATGAAAATTACAATGAATGATGTGGGTAATAATAAAATTGTGACAAATGAAATAATTAGATTTTGGTACTAAATGTATCCTTCTACATGTCATTAGATTCTGGCATTGTGGTCCAATGCCTTATTATCATATATGTGCGCTTGTTGAAAAAGATAGATGATTGTTATTTTTGCATCTTTTCACTTTGTTTGGAAACAGGATTATGTGCCAACTGTCTTCGACAATTTCAGTGCAAATGTGGTTGTGAATGGAAGCACTGTGAATCTGGGTTTATGGGACACTGCAGGTATCGTTATATAAATTTCTTTTCCTTTTTACAATGTACACAGTGCTGTCTGGATTTTTTATTGTTTTTCTTTTGAAACAGGACAAGAGGATTATAACAGATTAAGACCTTTGAGTTATCGTGGTGCTGATGTTTTCATTCTCGCTTTCTCACTCATAAGCAAGGCCAGTTATGAAAATGTTTCTAAAAAGGTACTTATCCCACTGTGTGTCAGAGTTTATGCTCCTTGTGTCCCATGTTTTTAAAATGCACTTTTGCATATTCCCTTTTATATGAATGTGTGGTTTCTTTATAAACTGGAATGAATGGTATACTGTTTATATTATAAAAATTGATGATAAATTTCATACGTGCTGTCTCATTTCCAGTGGATTCCAGAGTTGAAGCATTATGCACCTGGTGTTCCCATTATTCTGGTTGGCACAAAGCTTGGTAAGTCTATTTCTGGCCAATGTAACATCTGATATTGTAAATTCATGCATTAGTCAGTTGCTTCCTTCTAGCGTATAAACTAATAAGGCAAATGTTAACATGTGCCCCAAAGGCACATGTTAAGAAACCAAATATAGAAATACTATCTTGGAAGTTGTGTATTCAGCATCTTGAATGTTTAAATATTGCTTTTTTCAACACAAAACTCCTATTCTACTTCTTTTTTTTAATTAGTTAACAAGTGTTTTAAGGGTGCATGTTAGCAAGATCTAATTTATGATGTTATACACAGTTTGTGCTATGAAAGCATATGATCTTAAATATACGAAGTCCATGACCCATTATTGATAATTCTTTTTATGTTAATATTTTAAATGATGACCAGTCTTACTAAAGAGTAACTTCTTGCTTCCGGTAAAGGGGTGAACTGTGAAGGGTTGTTTTACTAGTTCATCTTGTACCTTTTTTTCCCTTCTCTTATAAGCTTTCATTTCAATTCAAGGTCTCTTTGGATTGACATATTTGAGCTTATCTACTGGCATAAATACTTGTGAGATTATTTGGGTGAACTTATGAACACAACTTTGGCATGTTCATAAGTTGTTTTTAGCTTATTTTCATAAGCTCTCAAAGATAGCTTATGAAAACTGCTTATAACTTATAGGGAAACAATTTAACTTTATTTACAGAAACAACTTATAAGTTGCAAGTTAAGTTGCTTATCCAAACAGTTTTTTATTCTTCCAATGTTTTTCAAAACAGTTATGGTCATGTTTTTTGTTTGATATTACTCTTCTTTCTTGTCTCTCTCTATATGGTCTTGTTTTTTTGTTGGATATTACTCCTTTCTTGTTTCTATATATTCCAAGATATTTTATATGGTAGGGATTTTTATGTAAGTTTACATTTGCTGTCTTGTATTTGCTAATTGATACAGTTCACGCATACTCATCCTTATTTAAGTTTTAGATGTTGTTGAACAACATGCATATTTGATGAATTCAACTTCCTTTTGGTTTCTTCTTGACACCGGATAAAAGGCATTAGGCAGTCTAGTTCAATGCTAGAGATCTCAGCTATCAAGCTTGACCATGTACTTGCGTCTAGAAAGTAGGAAGGGAGTGTTTGTGAAATGCAAAAGTACAATTTTAAAGTTGTTACTTTAGAATTTTGGTTTGGACTACCACGTCATTCTCACTAAAAATGTTTTAGTATTTGACATTAATTAAAAGGGAAATGGTCATTAATGATGGCATGATGCAGTATGGCATCAATATTTTAGAATGCCATGTGAATAACTTGCATGCCATTTTTTGCTCTATTTGGAGAATGAATAATTGTGTTAAAAGTATTTGTGACCTTTGCATGTTCTTTTACTGTTTTGTCAAATAAGAGCTGTTCCTTAACTATCTTGTGATTTGAAATGAGACAGACCTTCGGGATGACAAGCAGTTCTTTGTCGACCATCCTGGTGCTGTTCCTATTACCACCGCTCAGGTGAATATTGTGTTTCTGGTGCCTTGTTAATTTGTTTTCATACTTTTGCATGTTTGTAATCTATTTTAGCTCTTTAGTTAAATCAAATCTAAGATTTTCATATCTTCTTGAAGGGAGAAGAGCTCAGGAAGCTGATCAATGCACCTGCTTATATTGAATGCAGTTCAAAATCACAGCAGGTACATAATTGAATCTAGTGTTACCTTCTTGTACACGACGGTTAAGTTAATTAGTAATTTAGTCGTTTTAATTTGTTTATGTTTGTTACTGCAGAACGTCAAAGCAGTCTTTGATGCAGCCATAAGAGTTGTCCTTCAACCACCAAAGCAAAAGAAAAAGAAGAGTAAAGCTCAAAAGGCCTGTTCGATATTGTGA
Protein sequence

>MS.gene012136.t1

MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFVDHPGAVPITTAQGEELRKLINAPAYIECSSKSQQNVKAVFDAAIRVVLQPPKQKKKKSKAQKACSIL