AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene017610

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene017610.t1 MTR_8g075240 100.000 197 0 0 1 197 1 197 4.13e-147 406
MS.gene017610.t1 MTR_5g022600 97.462 197 5 0 1 197 1 197 1.39e-143 397
MS.gene017610.t1 MTR_4g073250 90.355 197 19 0 1 197 1 197 8.50e-136 378
MS.gene017610.t1 MTR_3g078260 78.866 194 40 1 2 194 4 197 1.26e-118 335
MS.gene017610.t1 MTR_4g088055 85.955 178 25 0 1 178 1 178 1.26e-117 332
MS.gene017610.t1 MTR_2g090875 84.831 178 27 0 1 178 1 178 2.26e-117 331
MS.gene017610.t1 MTR_6g087980 75.377 199 46 1 1 196 1 199 4.52e-113 321
MS.gene017610.t1 MTR_3g078260 87.395 119 15 0 2 120 4 122 3.21e-77 228
MS.gene017610.t1 MTR_7g103070 30.851 188 116 4 8 192 18 194 5.03e-26 99.8
MS.gene017610.t1 MTR_1g068740 31.383 188 116 6 6 191 15 191 2.14e-25 98.2
MS.gene017610.t1 MTR_1g068730 31.383 188 116 6 6 191 15 191 3.84e-25 97.8
MS.gene017610.t1 MTR_1g115325 32.386 176 106 6 6 179 15 179 7.33e-25 97.1
MS.gene017610.t1 MTR_7g100020 31.383 188 116 6 6 191 15 191 7.66e-25 97.1
MS.gene017610.t1 MTR_8g093740 31.053 190 116 5 6 192 13 190 4.86e-24 94.7
MS.gene017610.t1 MTR_3g096350 30.159 189 117 5 7 192 13 189 8.25e-24 94.0
MS.gene017610.t1 MTR_8g006970 33.728 169 98 6 6 172 8 164 6.46e-23 90.9
MS.gene017610.t1 MTR_1g094220 32.584 178 103 7 7 180 32 196 6.82e-23 91.3
MS.gene017610.t1 MTR_8g103550 32.222 180 107 6 8 184 11 178 9.36e-23 90.9
MS.gene017610.t1 MTR_8g006970 34.066 182 101 8 6 180 22 191 9.56e-23 91.3
MS.gene017610.t1 MTR_8g031870 30.233 172 106 5 1 170 1 160 1.80e-22 90.1
MS.gene017610.t1 MTR_1g029450 31.285 179 108 5 6 181 17 183 1.98e-22 90.5
MS.gene017610.t1 MTR_1g094220 34.320 169 94 7 7 171 32 187 2.17e-22 90.1
MS.gene017610.t1 MTR_1g094220 34.320 169 94 7 7 171 32 187 2.55e-22 90.1
MS.gene017610.t1 MTR_1g062760 30.508 177 108 5 8 181 16 180 2.75e-22 90.1
MS.gene017610.t1 MTR_7g081700 31.551 187 109 7 6 185 8 182 3.11e-22 89.7
MS.gene017610.t1 MTR_4g063160 30.851 188 115 7 6 189 15 191 3.73e-22 89.7
MS.gene017610.t1 MTR_4g098950 33.333 165 96 5 8 170 11 163 4.56e-22 89.4
MS.gene017610.t1 MTR_2g005500 31.429 175 103 6 1 170 1 163 5.17e-22 89.0
MS.gene017610.t1 MTR_1g094220 33.333 171 97 7 7 173 32 189 7.23e-22 89.4
MS.gene017610.t1 MTR_1g068730 33.566 143 85 5 6 140 15 155 2.29e-21 86.7
MS.gene017610.t1 MTR_3g064390 33.520 179 104 5 8 183 12 178 2.36e-21 87.4
MS.gene017610.t1 MTR_6g021790 28.177 181 116 5 1 179 1 169 7.85e-21 86.3
MS.gene017610.t1 MTR_2g027660 28.488 172 109 5 1 170 1 160 9.10e-21 85.9
MS.gene017610.t1 MTR_2g096550 30.319 188 116 6 6 189 15 191 9.68e-21 85.9
MS.gene017610.t1 MTR_1g068740 32.624 141 87 4 6 139 15 154 1.38e-20 85.1
MS.gene017610.t1 MTR_5g013900 32.727 165 97 5 8 170 11 163 1.73e-20 85.1
MS.gene017610.t1 MTR_8g031830 29.825 171 106 5 1 169 1 159 3.13e-20 84.3
MS.gene017610.t1 MTR_2g083860 29.282 181 114 5 6 184 13 181 4.18e-20 84.3
MS.gene017610.t1 MTR_8g027220 31.522 184 97 7 8 169 28 204 4.70e-20 84.7
MS.gene017610.t1 MTR_5g076590 32.121 165 98 4 8 170 12 164 5.71e-20 83.6
MS.gene017610.t1 MTR_8g031660 29.070 172 108 5 1 170 1 160 7.01e-20 83.6
MS.gene017610.t1 MTR_3g069510 30.729 192 117 6 6 195 12 189 8.03e-20 83.6
MS.gene017610.t1 MTR_2g102060 30.909 165 100 5 8 170 12 164 1.17e-19 82.8
MS.gene017610.t1 MTR_2g005510 31.579 171 103 5 6 174 15 173 1.23e-19 83.2
MS.gene017610.t1 MTR_8g031680 27.907 172 110 5 1 170 1 160 1.59e-19 82.8
MS.gene017610.t1 MTR_1g052475 33.333 165 96 5 8 170 17 169 1.74e-19 82.8
MS.gene017610.t1 MTR_7g117910 35.714 126 78 3 8 131 22 146 4.10e-19 81.6
MS.gene017610.t1 MTR_3g087160 30.909 165 100 4 8 170 11 163 4.74e-19 81.3
MS.gene017610.t1 MTR_4g079350 33.333 150 90 4 6 146 13 161 5.73e-19 81.3
MS.gene017610.t1 MTR_0262s0050 32.727 165 97 6 8 170 17 169 5.91e-19 81.6
MS.gene017610.t1 MTR_8g090215 31.515 165 99 5 8 170 11 163 7.50e-19 80.9
MS.gene017610.t1 MTR_1g097420 31.250 192 115 7 1 184 1 183 7.58e-19 80.9
MS.gene017610.t1 MTR_3g064390 36.885 122 74 3 8 127 12 132 8.46e-19 79.7
MS.gene017610.t1 MTR_7g051940 28.947 190 121 5 6 193 13 190 1.07e-18 80.5
MS.gene017610.t1 MTR_1g090717 28.495 186 118 5 7 188 16 190 1.30e-18 80.5
MS.gene017610.t1 MTR_4g088090 31.737 167 100 5 6 170 13 167 1.55e-18 80.1
MS.gene017610.t1 MTR_8g089985 32.121 165 98 5 8 170 19 171 1.68e-18 80.5
MS.gene017610.t1 MTR_2g075950 35.833 120 74 3 6 123 13 131 2.83e-18 79.7
MS.gene017610.t1 MTR_2g014990 35.833 120 74 3 6 123 13 131 4.43e-18 79.0
MS.gene017610.t1 MTR_4g064897 32.609 138 83 4 6 134 12 148 5.54e-18 79.0
MS.gene017610.t1 MTR_7g405790 28.947 190 121 5 6 193 15 192 8.28e-18 78.6
MS.gene017610.t1 MTR_3g096350 34.746 118 73 3 7 121 13 129 1.00e-17 76.6
MS.gene017610.t1 MTR_3g096350 34.746 118 73 3 7 121 13 129 1.11e-17 76.3
MS.gene017610.t1 MTR_3g086980 31.325 166 98 6 8 170 18 170 1.17e-17 78.2
MS.gene017610.t1 MTR_2g101890 29.570 186 116 6 6 185 10 186 2.86e-17 76.6
MS.gene017610.t1 MTR_1g078200 30.114 176 105 6 6 177 14 175 4.62e-17 76.6
MS.gene017610.t1 MTR_4g069850 28.495 186 118 5 6 185 8 184 5.66e-17 75.9
MS.gene017610.t1 MTR_8g107070 29.101 189 120 5 6 192 14 190 7.90e-17 76.6
MS.gene017610.t1 MTR_8g093740 28.902 173 99 4 22 192 7 157 1.34e-16 74.3
MS.gene017610.t1 MTR_4g012940 29.016 193 120 7 1 185 1 184 2.29e-16 74.3
MS.gene017610.t1 MTR_8g036220 31.138 167 101 6 6 170 16 170 2.67e-16 74.7
MS.gene017610.t1 MTR_8g092020 26.238 202 122 4 6 188 12 205 6.98e-16 73.2
MS.gene017610.t1 MTR_2g090865 36.667 120 73 3 6 123 11 129 8.22e-16 72.8
MS.gene017610.t1 MTR_7g103070 29.054 148 92 3 47 192 2 138 1.19e-15 71.2
MS.gene017610.t1 MTR_6g079550 29.697 165 103 5 6 161 12 172 3.09e-15 71.6
MS.gene017610.t1 MTR_1g097420 31.034 174 105 6 17 184 46 210 3.27e-15 71.6
MS.gene017610.t1 MTR_7g094810 30.460 174 113 2 7 180 9 174 4.66e-15 73.2
MS.gene017610.t1 MTR_7g094810 28.342 187 100 3 7 180 9 174 4.67e-15 73.2
MS.gene017610.t1 MTR_7g094810 28.342 187 100 3 7 180 9 174 4.68e-15 73.2
MS.gene017610.t1 MTR_7g094810 28.342 187 100 3 7 180 9 174 4.89e-15 72.8
MS.gene017610.t1 MTR_7g094810 30.460 174 113 2 7 180 9 174 4.92e-15 73.2
MS.gene017610.t1 MTR_3g107717 28.485 165 103 4 7 170 14 164 3.46e-14 68.6
MS.gene017610.t1 MTR_4g099470 30.822 146 87 5 29 172 7 140 3.48e-14 67.8
MS.gene017610.t1 MTR_3g107707 28.485 165 103 4 7 170 14 164 3.76e-14 68.6
MS.gene017610.t1 MTR_3g107713 28.485 165 103 4 7 170 14 164 4.03e-14 68.6
MS.gene017610.t1 MTR_1g072280 28.571 175 115 4 7 180 13 178 2.59e-13 68.2
MS.gene017610.t1 MTR_1g082870 28.571 175 115 4 7 180 17 182 3.72e-13 67.8
MS.gene017610.t1 MTR_4g113620 27.966 118 76 3 7 124 14 122 2.09e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene017610.t1 AT2G17800 95.939 197 8 0 1 197 1 197 1.29e-129 362
MS.gene017610.t1 AT2G17800 95.939 197 8 0 1 197 1 197 1.29e-129 362
MS.gene017610.t1 AT3G51300 95.939 197 8 0 1 197 1 197 2.04e-129 362
MS.gene017610.t1 AT4G35950 95.431 197 9 0 1 197 1 197 3.23e-129 361
MS.gene017610.t1 AT4G35020 88.889 198 21 1 1 197 1 198 1.52e-127 357
MS.gene017610.t1 AT4G35020 88.889 198 21 1 1 197 1 198 1.52e-127 357
MS.gene017610.t1 AT4G35020 88.889 198 21 1 1 197 1 198 1.52e-127 357
MS.gene017610.t1 AT1G75840 92.697 178 13 0 1 178 1 178 1.21e-124 350
MS.gene017610.t1 AT1G20090 91.477 176 15 0 3 178 2 177 4.40e-122 343
MS.gene017610.t1 AT5G45970 87.151 179 23 0 1 179 1 179 2.78e-119 336
MS.gene017610.t1 AT5G62880 81.564 179 33 0 2 180 4 182 5.40e-113 321
MS.gene017610.t1 AT3G48040 81.564 179 33 0 2 180 4 182 7.47e-112 318
MS.gene017610.t1 AT4G28950 75.000 200 44 2 1 196 1 198 4.93e-111 316
MS.gene017610.t1 AT2G44690 75.521 192 47 0 6 197 18 209 1.18e-107 307
MS.gene017610.t1 AT5G62880 80.233 172 30 1 2 173 4 171 4.26e-105 300
MS.gene017610.t1 AT3G48040 81.595 163 30 0 2 164 4 166 3.69e-102 292
MS.gene017610.t1 AT3G51290 95.732 164 7 0 34 197 635 798 3.76e-98 301
MS.gene017610.t1 AT4G35020 93.333 120 8 0 1 120 1 120 9.36e-83 242
MS.gene017610.t1 AT4G35020 93.333 120 8 0 1 120 1 120 9.36e-83 242
MS.gene017610.t1 AT3G54840 33.929 168 96 6 7 171 34 189 3.18e-24 94.7
MS.gene017610.t1 AT3G46060 32.934 167 99 6 6 170 15 170 3.43e-24 95.1
MS.gene017610.t1 AT3G46060 32.934 167 99 6 6 170 15 170 3.43e-24 95.1
MS.gene017610.t1 AT3G46060 32.934 167 99 6 6 170 15 170 3.43e-24 95.1
MS.gene017610.t1 AT3G54840 32.738 168 98 5 7 171 34 189 3.48e-24 94.7
MS.gene017610.t1 AT3G54840 32.530 166 97 5 9 171 2 155 1.20e-23 92.4
MS.gene017610.t1 AT1G02130 33.136 169 99 6 6 172 8 164 1.48e-23 93.2
MS.gene017610.t1 AT5G45130 33.939 165 95 4 8 170 12 164 1.98e-23 92.8
MS.gene017610.t1 AT3G53610 31.737 167 101 6 6 170 15 170 4.83e-23 92.0
MS.gene017610.t1 AT3G53610 31.737 167 101 6 6 170 15 170 4.83e-23 92.0
MS.gene017610.t1 AT3G53610 31.737 167 101 6 6 170 15 170 4.83e-23 92.0
MS.gene017610.t1 AT4G19640 33.939 165 95 4 8 170 12 164 5.04e-23 91.7
MS.gene017610.t1 AT5G59840 31.737 167 101 5 6 170 15 170 5.60e-23 92.0
MS.gene017610.t1 AT1G43890 29.474 190 119 5 6 192 13 190 9.10e-23 91.3
MS.gene017610.t1 AT1G43890 29.474 190 119 5 6 192 13 190 9.10e-23 91.3
MS.gene017610.t1 AT1G43890 29.474 190 119 5 6 192 13 190 9.10e-23 91.3
MS.gene017610.t1 AT5G45130 33.742 163 94 4 10 170 22 172 9.68e-23 91.3
MS.gene017610.t1 AT5G03530 29.255 188 118 5 8 192 15 190 1.08e-22 91.3
MS.gene017610.t1 AT5G03530 29.255 188 118 5 8 192 15 190 1.08e-22 91.3
MS.gene017610.t1 AT1G16920 32.418 182 109 6 6 185 13 182 7.59e-22 89.0
MS.gene017610.t1 AT2G44610 33.333 165 96 5 8 170 11 163 1.66e-21 87.8
MS.gene017610.t1 AT4G35860 28.177 181 116 5 1 179 1 169 2.35e-21 87.8
MS.gene017610.t1 AT4G17530 31.551 187 109 7 6 185 8 182 2.59e-21 87.4
MS.gene017610.t1 AT3G11730 30.539 167 102 5 6 170 8 162 4.20e-21 87.0
MS.gene017610.t1 AT4G39890 34.731 167 92 6 8 170 11 164 4.55e-21 87.0
MS.gene017610.t1 AT5G47200 31.868 182 105 7 6 180 8 177 5.83e-21 86.3
MS.gene017610.t1 AT1G09630 34.667 150 88 4 6 146 12 160 1.18e-20 85.9
MS.gene017610.t1 AT4G19640 37.705 122 73 3 8 127 12 132 1.76e-20 84.0
MS.gene017610.t1 AT1G18200 29.834 181 113 5 6 184 13 181 2.24e-20 85.5
MS.gene017610.t1 AT3G09900 31.383 188 116 6 6 191 15 191 2.88e-20 85.1
MS.gene017610.t1 AT4G18430 34.132 167 96 5 6 170 13 167 2.95e-20 84.7
MS.gene017610.t1 AT2G22290 33.333 165 96 5 8 170 11 163 3.01e-20 84.7
MS.gene017610.t1 AT4G17170 27.907 172 110 5 1 170 1 160 3.62e-20 84.3
MS.gene017610.t1 AT4G19640 37.705 122 73 3 8 127 12 132 5.16e-20 83.6
MS.gene017610.t1 AT1G73640 31.492 181 110 5 6 184 13 181 5.23e-20 84.7
MS.gene017610.t1 AT3G07410 31.579 190 116 5 6 193 12 189 5.76e-20 84.0
MS.gene017610.t1 AT2G31680 30.159 189 118 4 6 192 12 188 1.18e-19 83.2
MS.gene017610.t1 AT1G06400 31.892 185 109 6 6 188 13 182 1.19e-19 83.2
MS.gene017610.t1 AT3G12160 33.333 165 96 5 8 170 17 169 1.25e-19 83.2
MS.gene017610.t1 AT2G43130 29.630 189 119 5 6 192 12 188 1.27e-19 83.2
MS.gene017610.t1 AT5G03520 31.383 188 116 6 6 191 15 191 1.54e-19 82.8
MS.gene017610.t1 AT4G17160 26.744 172 112 5 1 170 1 160 1.93e-19 82.4
MS.gene017610.t1 AT4G18800 36.667 120 73 3 6 123 13 131 2.91e-19 82.0
MS.gene017610.t1 AT3G15060 30.726 179 110 5 8 184 15 181 6.81e-19 81.3
MS.gene017610.t1 AT5G10260 32.121 165 98 5 8 170 11 163 1.10e-18 80.5
MS.gene017610.t1 AT1G05810 30.159 189 118 5 6 192 12 188 1.24e-18 80.5
MS.gene017610.t1 AT3G18820 30.108 186 115 6 6 185 8 184 1.27e-18 80.5
MS.gene017610.t1 AT1G05810 30.159 189 118 5 6 192 58 234 1.55e-18 81.3
MS.gene017610.t1 AT5G45750 35.833 120 74 3 6 123 13 131 1.96e-18 80.1
MS.gene017610.t1 AT5G60860 29.834 181 113 5 6 184 13 181 2.15e-18 80.1
MS.gene017610.t1 AT5G64990 33.333 165 96 5 8 170 9 161 3.27e-18 79.3
MS.gene017610.t1 AT1G01200 34.337 166 94 6 8 170 30 183 5.43e-18 79.3
MS.gene017610.t1 AT5G47520 28.652 178 113 5 2 177 10 175 8.12e-18 78.6
MS.gene017610.t1 AT1G28550 36.667 120 73 3 6 123 13 131 1.23e-17 77.8
MS.gene017610.t1 AT1G07410 35.294 119 74 3 6 122 12 129 2.12e-17 77.4
MS.gene017610.t1 AT5G59150 29.825 171 106 6 6 174 12 170 2.21e-17 77.4
MS.gene017610.t1 AT2G21880 27.717 184 120 4 6 184 9 184 2.65e-17 77.0
MS.gene017610.t1 AT4G39990 28.495 186 117 6 8 190 19 191 4.05e-17 76.6
MS.gene017610.t1 AT2G33870 36.975 119 72 3 6 122 13 130 4.28e-17 76.6
MS.gene017610.t1 AT5G47960 34.188 117 74 3 8 122 17 132 4.51e-17 76.6
MS.gene017610.t1 AT5G65270 28.889 180 112 6 8 184 19 185 7.80e-17 75.9
MS.gene017610.t1 AT1G22740 28.646 192 120 6 1 184 1 183 9.44e-17 75.5
MS.gene017610.t1 AT3G46830 33.613 119 76 3 6 122 12 129 2.57e-16 74.3
MS.gene017610.t1 AT3G46830 33.613 119 76 3 6 122 12 129 2.57e-16 74.3
MS.gene017610.t1 AT1G52280 30.726 179 107 7 1 171 1 170 3.16e-16 73.9
MS.gene017610.t1 AT5G27540 25.862 174 121 2 7 180 18 183 3.52e-16 76.3
MS.gene017610.t1 AT5G27540 25.862 174 121 2 7 180 18 183 3.52e-16 76.3
MS.gene017610.t1 AT3G16100 29.016 193 120 7 1 185 1 184 6.39e-16 73.2
MS.gene017610.t1 AT4G09720 30.994 171 103 6 6 170 8 169 1.32e-15 72.4
MS.gene017610.t1 AT5G64990 31.977 172 96 6 8 170 9 168 1.44e-15 72.4
MS.gene017610.t1 AT3G09910 28.249 177 112 5 8 181 15 179 1.70e-15 72.0
MS.gene017610.t1 AT3G09910 28.249 177 112 5 8 181 15 179 1.70e-15 72.0
MS.gene017610.t1 AT3G09910 28.249 177 112 5 8 181 15 179 1.70e-15 72.0
MS.gene017610.t1 AT1G49300 30.409 171 104 6 6 170 8 169 3.01e-15 71.2
MS.gene017610.t1 AT1G49300 30.409 171 104 6 6 170 8 169 3.01e-15 71.2
MS.gene017610.t1 AT5G55080 30.769 117 79 2 7 122 14 129 3.31e-15 71.6
MS.gene017610.t1 AT3G09910 28.889 180 110 6 8 181 15 182 1.10e-14 69.7
MS.gene017610.t1 AT3G09910 28.889 180 110 6 8 181 15 182 1.10e-14 69.7
MS.gene017610.t1 AT3G63150 30.114 176 111 6 7 180 15 180 2.44e-14 71.2
MS.gene017610.t1 AT5G20020 28.485 165 103 4 7 170 14 164 2.69e-14 68.9
MS.gene017610.t1 AT4G09720 28.977 176 105 5 6 170 8 174 3.28e-14 68.6
MS.gene017610.t1 AT5G55190 28.485 165 103 4 7 170 14 164 3.37e-14 68.9
MS.gene017610.t1 AT5G20010 28.485 165 103 4 7 170 14 164 3.74e-14 68.6
MS.gene017610.t1 AT4G09720 28.022 182 105 5 6 170 8 180 2.66e-13 66.2
MS.gene017610.t1 AT5G03520 30.137 146 90 5 47 191 47 181 3.17e-13 65.9
MS.gene017610.t1 AT5G39620 27.322 183 118 5 7 183 6 179 6.75e-13 65.1
MS.gene017610.t1 AT4G35860 26.119 134 86 4 47 179 2 123 2.09e-12 62.8
MS.gene017610.t1 AT2G21880 25.749 167 111 4 23 184 1 159 5.43e-11 59.3
MS.gene017610.t1 AT2G21880 25.749 167 111 4 23 184 1 159 5.43e-11 59.3

Find 44 sgRNAs with CRISPR-Local

Find 187 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCACTGTGAATCTGGGTTTA+TGG 0.186099 8.3:-28302703 MS.gene017610:CDS
TTATGAAAATGTTTCTAAAA+AGG 0.255465 8.3:-28302501 MS.gene017610:intron
CTTTGTGCCAACCAGAATAA+TGG 0.304891 8.3:+28302266 None:intergenic
GAAAGAAGATGAGCGCTTCT+AGG 0.324588 8.3:-28303775 None:intergenic
CACTGTGAATCTGGGTTTAT+GGG 0.333768 8.3:-28302702 MS.gene017610:CDS
ACCTGGTGTTCCCATTATTC+TGG 0.347919 8.3:-28302277 MS.gene017610:CDS
GAATGGAAGCACTGTGAATC+TGG 0.355358 8.3:-28302711 MS.gene017610:CDS
TTCACCTGAGCGGTGGTAAT+AGG 0.380693 8.3:+28300806 None:intergenic
TGGTTGAAGGACAACTCTTA+TGG 0.386728 8.3:+28300490 None:intergenic
TCATCAAGTGTGTTACTGTT+GGG 0.391822 8.3:-28303751 MS.gene017610:CDS
AAAGAAGAGTAAAGCTCAAA+AGG 0.404647 8.3:-28300453 MS.gene017610:CDS
CACAGTGGGGAAGGTATTGC+TGG 0.423554 8.3:+28303688 None:intergenic
TTTGTGCCAACCAGAATAAT+GGG 0.430326 8.3:+28302267 None:intergenic
TTGAAATGAGACAGACCTTC+GGG 0.436373 8.3:-28300867 MS.gene017610:intron
AGTGCAAATGTGGTTGTGAA+TGG 0.466304 8.3:-28302728 MS.gene017610:CDS
TTCATCAAGTGTGTTACTGT+TGG 0.472314 8.3:-28303752 MS.gene017610:CDS
ATTCTGGTTGGCACAAAGCT+TGG 0.474465 8.3:-28302261 MS.gene017610:intron
GGTGCATAATGCTTCAACTC+TGG 0.481713 8.3:+28302297 None:intergenic
CAGTTCTTTGTCGACCATCC+TGG 0.485725 8.3:-28300836 MS.gene017610:CDS
AGCAAATCACAATATCGAAC+AGG 0.488579 8.3:+28300430 None:intergenic
GAACTGCATTCAATATAAGC+AGG 0.495522 8.3:+28300645 None:intergenic
GGTGTTCCCATTATTCTGGT+TGG 0.501900 8.3:-28302273 MS.gene017610:CDS
TCTTGAAGGGAGAAGAGCTC+AGG 0.509266 8.3:-28300683 MS.gene017610:intron
CGCTTTCTCACTCATAAGCA+AGG 0.527969 8.3:-28302528 MS.gene017610:CDS
CTTGAAATGAGACAGACCTT+CGG 0.529221 8.3:-28300868 MS.gene017610:intron
CTGAAATTGTCGAAGACAGT+TGG 0.537778 8.3:+28302749 None:intergenic
TTCTTGTGAAACAGGACAAG+AGG 0.543155 8.3:-28302603 MS.gene017610:intron
TGTTCCTATTACCACCGCTC+AGG 0.553664 8.3:-28300810 MS.gene017610:intron
CGACAATTTCAGTGCAAATG+TGG 0.560089 8.3:-28302738 MS.gene017610:CDS
ACTGTTGGGGATGGAGCTGT+TGG 0.567138 8.3:-28303737 MS.gene017610:CDS
CTGGGTTTATGGGACACTGC+AGG 0.572114 8.3:-28302692 MS.gene017610:intron
CACAATATTCACCTGAGCGG+TGG 0.588643 8.3:+28300799 None:intergenic
CATCAAGTGTGTTACTGTTG+GGG 0.592671 8.3:-28303750 MS.gene017610:CDS
TTAAGACCTTTGAGTTATCG+TGG 0.598742 8.3:-28302569 MS.gene017610:CDS
ATGCAGTTCAAAATCACAGC+AGG 0.601412 8.3:-28300631 MS.gene017610:intron
AATGGAAGCACTGTGAATCT+GGG 0.602680 8.3:-28302710 MS.gene017610:CDS
AAGTGTGTTACTGTTGGGGA+TGG 0.603907 8.3:-28303746 MS.gene017610:CDS
GAGTTGAAGCATTATGCACC+TGG 0.616427 8.3:-28302294 MS.gene017610:CDS
ACCAGAATAATGGGAACACC+AGG 0.622688 8.3:+28302276 None:intergenic
GTGGTAATAGGAACAGCACC+AGG 0.638537 8.3:+28300818 None:intergenic
TAATAGGAACAGCACCAGGA+TGG 0.658624 8.3:+28300822 None:intergenic
AGAACTGCTTGTCATCCCGA+AGG 0.663377 8.3:+28300852 None:intergenic
TCAGCACCACGATAACTCAA+AGG 0.665908 8.3:+28302563 None:intergenic
AAACACAATATTCACCTGAG+CGG 0.759772 8.3:+28300796 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAAGAATTATCAATAA+TGG + chr8.3:28302279-28302298 None:intergenic 10.0%
!! TAAAAAGAATTATCAATAAT+GGG + chr8.3:28302278-28302297 None:intergenic 10.0%
!! TAAACAAAAACAAATAAAAA+GGG + chr8.3:28301193-28301212 None:intergenic 10.0%
!! TTAAACAAAAACAAATAAAA+AGG + chr8.3:28301194-28301213 None:intergenic 10.0%
!! AAACAAAAACAAATAAAAAG+GGG + chr8.3:28301192-28301211 None:intergenic 15.0%
!! AGTATTTGACATTAATTAAA+AGG - chr8.3:28303128-28303147 MS.gene017610:intron 15.0%
!! ATAAGAAGATTAAAAAGAAA+AGG + chr8.3:28300556-28300575 None:intergenic 15.0%
!! ATTAAAAAAAGAAATAGAAG+AGG + chr8.3:28302149-28302168 None:intergenic 15.0%
!! GTATTTGACATTAATTAAAA+GGG - chr8.3:28303129-28303148 MS.gene017610:intron 15.0%
!! TAAGAAGATTAAAAAGAAAA+GGG + chr8.3:28300555-28300574 None:intergenic 15.0%
!!! AAGTTGTTAATTTAGAATTT+TGG - chr8.3:28303069-28303088 MS.gene017610:intron 15.0%
!!! ATATTCCAAGATATTTTATA+CGG - chr8.3:28302779-28302798 MS.gene017610:intron 15.0%
!!! CAAATGAAATAATTAGATTT+TGG - chr8.3:28301290-28301309 MS.gene017610:intron 15.0%
!!! CTAATTTGGATTTTATTTTT+TGG - chr8.3:28300614-28300633 MS.gene017610:intron 15.0%
!!! TTATGAAAATGTTTCTAAAA+AGG - chr8.3:28301702-28301721 MS.gene017610:intron 15.0%
!! AAAACTGCTTATAACTTATA+GGG - chr8.3:28302559-28302578 MS.gene017610:CDS 20.0%
!! AAAATTACAATGAATGATGT+GGG - chr8.3:28301250-28301269 MS.gene017610:intron 20.0%
!! AAACATGAGAAAATTGAATT+TGG - chr8.3:28300833-28300852 MS.gene017610:CDS 20.0%
!! AAATACTTGTGAGATTATTT+GGG - chr8.3:28302459-28302478 MS.gene017610:intron 20.0%
!! CAAATATAGAAATACTATCT+TGG - chr8.3:28302067-28302086 MS.gene017610:intron 20.0%
!! GAATTGAAATTTCACTAATT+TGG - chr8.3:28300600-28300619 MS.gene017610:intron 20.0%
!! TAAATACTTGTGAGATTATT+TGG - chr8.3:28302458-28302477 MS.gene017610:intron 20.0%
!! TGAAAATTATCTCAATTCAA+AGG - chr8.3:28300885-28300904 MS.gene017610:intron 20.0%
!! TGTGTATAACATCATAAATT+AGG + chr8.3:28302209-28302228 None:intergenic 20.0%
!! TTATGTGTTATCGAATTAAT+TGG - chr8.3:28300578-28300597 MS.gene017610:intron 20.0%
!!! AAAAGTGCATTTTAAAAACA+TGG + chr8.3:28301769-28301788 None:intergenic 20.0%
!!! AAAGTGCATTTTAAAAACAT+GGG + chr8.3:28301768-28301787 None:intergenic 20.0%
!!! AATGTTTTTCAAAACAGTTA+TGG - chr8.3:28302661-28302680 MS.gene017610:intron 20.0%
!!! ATAACTGTTTTGAAAAACAT+TGG + chr8.3:28302662-28302681 None:intergenic 20.0%
!!! ATTAGTTAACAAGTGTTTTA+AGG - chr8.3:28302167-28302186 MS.gene017610:intron 20.0%
!!! CAACATCTAAAACTTAAATA+AGG + chr8.3:28302873-28302892 None:intergenic 20.0%
!!! CAAGATAGTATTTCTATATT+TGG + chr8.3:28302069-28302088 None:intergenic 20.0%
!!! GTTAATTTAGAATTTTGGTT+TGG - chr8.3:28303074-28303093 MS.gene017610:intron 20.0%
!!! TTAGTTAACAAGTGTTTTAA+GGG - chr8.3:28302168-28302187 MS.gene017610:intron 20.0%
!!! TTATTGTTATGATCGTTTTT+GGG - chr8.3:28300642-28300661 MS.gene017610:CDS 20.0%
!!! TTTAGAAACATTTTCATAAC+TGG + chr8.3:28301701-28301720 None:intergenic 20.0%
! AAATGAAAGCTTATAAGAGA+AGG + chr8.3:28302390-28302409 None:intergenic 25.0%
! AATGAAAGCTTATAAGAGAA+GGG + chr8.3:28302389-28302408 None:intergenic 25.0%
! AGTGCACATATATGATAATA+AGG + chr8.3:28301368-28301387 None:intergenic 25.0%
! ATTTATTTCGAATGTTTGTG+TGG - chr8.3:28300808-28300827 MS.gene017610:intron 25.0%
! CATATATGATAATAAGGCAT+TGG + chr8.3:28301362-28301381 None:intergenic 25.0%
! GAAAACTGCTTATAACTTAT+AGG - chr8.3:28302558-28302577 MS.gene017610:CDS 25.0%
! GAAAATTACAATGAATGATG+TGG - chr8.3:28301249-28301268 MS.gene017610:intron 25.0%
! GACATTAATTAAAAGGGAAA+TGG - chr8.3:28303135-28303154 MS.gene017610:intron 25.0%
! GTTTAAGCCCAAATAATAAA+AGG + chr8.3:28301039-28301058 None:intergenic 25.0%
! TAAGCTTTCATTTCAATTCA+AGG - chr8.3:28302397-28302416 MS.gene017610:intron 25.0%
! TACAAAATCAGATGTTACAT+TGG + chr8.3:28301983-28302002 None:intergenic 25.0%
! TGGAAGAATAAAAAACTGTT+TGG + chr8.3:28302642-28302661 None:intergenic 25.0%
! TTATAAGAGAAGGGAAAAAA+AGG + chr8.3:28302380-28302399 None:intergenic 25.0%
! TTCTAGCGTATAAACTAATA+AGG - chr8.3:28302029-28302048 MS.gene017610:intron 25.0%
!! AATGTTTCAAGCTTTTAGAT+TGG - chr8.3:28301069-28301088 MS.gene017610:intron 25.0%
!! ATGTTTCAAGCTTTTAGATT+GGG - chr8.3:28301070-28301089 MS.gene017610:intron 25.0%
!! GGTTCATCCTTTTATTATTT+GGG - chr8.3:28301029-28301048 MS.gene017610:intron 25.0%
!! GTTATTGTTATGATCGTTTT+TGG - chr8.3:28300641-28300660 MS.gene017610:CDS 25.0%
!! TGATGAATTCAACTTTCTTT+TGG - chr8.3:28302911-28302930 MS.gene017610:intron 25.0%
!! TGGTTCATCCTTTTATTATT+TGG - chr8.3:28301028-28301047 MS.gene017610:intron 25.0%
!! TTATTAGTTTATACGCTAGA+AGG + chr8.3:28302030-28302049 None:intergenic 25.0%
!! TTTTATCGCAAAAACTTCAA+AGG + chr8.3:28301106-28301125 None:intergenic 25.0%
!!! ATATGGTCTTGTTTTTTTGT+TGG - chr8.3:28302730-28302749 MS.gene017610:CDS 25.0%
!!! TATTGTTTTTCTTGTGAAAC+AGG - chr8.3:28301592-28301611 MS.gene017610:intron 25.0%
AAAATGAAAAAGCTCACAGT+GGG + chr8.3:28300532-28300551 None:intergenic 30.0%
AAACCACACATTCATATGAA+GGG + chr8.3:28301799-28301818 None:intergenic 30.0%
AAAGAAGAGTAAAGCTCAAA+AGG - chr8.3:28303750-28303769 MS.gene017610:CDS 30.0%
AACAGTAAAAGAACATGCAA+AGG + chr8.3:28303279-28303298 None:intergenic 30.0%
AAGTTACTCTTTAGTAAGAC+TGG + chr8.3:28302322-28302341 None:intergenic 30.0%
AATCTCACAAGTATTTATGC+CGG + chr8.3:28302455-28302474 None:intergenic 30.0%
ACATATTTGAGCTTATCTAC+CGG - chr8.3:28302433-28302452 MS.gene017610:intron 30.0%
ACCTATTAAGGTGAATAAGT+GGG - chr8.3:28300935-28300954 MS.gene017610:intron 30.0%
AGAATCTAATGACATGTAGA+AGG + chr8.3:28301328-28301347 None:intergenic 30.0%
AGACTTTCATATCTTCTTGA+AGG - chr8.3:28303506-28303525 MS.gene017610:intron 30.0%
ATGTTTACGGAAAATTGAGT+TGG - chr8.3:28300731-28300750 MS.gene017610:intron 30.0%
ATTTCAATTCAAGGTCTCTT+TGG - chr8.3:28302406-28302425 MS.gene017610:intron 30.0%
CATCTGGTTAATGATGTTTA+CGG - chr8.3:28300718-28300737 MS.gene017610:intron 30.0%
GACTTTCATATCTTCTTGAA+GGG - chr8.3:28303507-28303526 MS.gene017610:intron 30.0%
GATGAACTAGTAAAACAAAC+CGG + chr8.3:28302352-28302371 None:intergenic 30.0%
TAGAAATACTATCTTGGAAG+TGG - chr8.3:28302073-28302092 MS.gene017610:intron 30.0%
TAGTTATAGATGTTGACATC+TGG - chr8.3:28300702-28300721 MS.gene017610:intron 30.0%
TCTCCAAATAGAGCAAAAAA+TGG + chr8.3:28303227-28303246 None:intergenic 30.0%
TGAACTTATGAACACAACTT+TGG - chr8.3:28302482-28302501 MS.gene017610:intron 30.0%
TGTGTGGTTTCTTTATAAAC+TGG - chr8.3:28301809-28301828 MS.gene017610:intron 30.0%
TTCAAGTCACAAGATAGTTA+AGG + chr8.3:28303321-28303340 None:intergenic 30.0%
TTCTACATGTCATTAGATTC+TGG - chr8.3:28301327-28301346 MS.gene017610:intron 30.0%
TTCTTGTCTTTCTCTCTATA+TGG - chr8.3:28302713-28302732 MS.gene017610:CDS 30.0%
! AGTTTTTGCGATAAAAGATG+AGG - chr8.3:28301110-28301129 MS.gene017610:intron 30.0%
! CCAAGATATTTTATACGGTA+GGG - chr8.3:28302784-28302803 MS.gene017610:intron 30.0%
! CTCTTCTTTTTCTTTTGCTT+TGG + chr8.3:28303739-28303758 None:intergenic 30.0%
! TCCAAGATATTTTATACGGT+AGG - chr8.3:28302783-28302802 MS.gene017610:intron 30.0%
! TTCTTTTTCTTTTGCTTTGG+TGG + chr8.3:28303736-28303755 None:intergenic 30.0%
! TTGCATCTTTTCACTTTGTT+TGG - chr8.3:28301416-28301435 MS.gene017610:intron 30.0%
!! GAATTATCAATAATGGGTCA+TGG + chr8.3:28302272-28302291 None:intergenic 30.0%
!! TTTTAAAAACATGGGACACA+AGG + chr8.3:28301760-28301779 None:intergenic 30.0%
!! TTTTCACTTTGTTTGGAAAC+AGG - chr8.3:28301423-28301442 MS.gene017610:intron 30.0%
!!! ATGCCATTTTTTGCTCTATT+TGG - chr8.3:28303221-28303240 MS.gene017610:intron 30.0%
AAACACAATATTCACCTGAG+CGG + chr8.3:28303410-28303429 None:intergenic 35.0%
AAAGAGTAACTTCTTGCTTC+CGG - chr8.3:28302330-28302349 MS.gene017610:intron 35.0%
AAATGAAAAAGCTCACAGTG+GGG + chr8.3:28300531-28300550 None:intergenic 35.0%
AAGCTTGGTAAGTCTATATC+TGG - chr8.3:28301957-28301976 MS.gene017610:intron 35.0%
AGGGAAATGGTCATTAATGA+TGG - chr8.3:28303148-28303167 MS.gene017610:intron 35.0%
ATTCCCTTCATATGAATGTG+TGG - chr8.3:28301793-28301812 MS.gene017610:intron 35.0%
CACCTATTAAGGTGAATAAG+TGG - chr8.3:28300934-28300953 MS.gene017610:intron 35.0%
CCCTACCGTATAAAATATCT+TGG + chr8.3:28302787-28302806 None:intergenic 35.0%
CCTATTAAGGTGAATAAGTG+GGG - chr8.3:28300936-28300955 MS.gene017610:intron 35.0%
GAAAATGAAAAAGCTCACAG+TGG + chr8.3:28300533-28300552 None:intergenic 35.0%
GAAACCACACATTCATATGA+AGG + chr8.3:28301800-28301819 None:intergenic 35.0%
GAACTGCATTCAATATAAGC+AGG + chr8.3:28303561-28303580 None:intergenic 35.0%
GGCTAGAAATTCACCTATTA+AGG - chr8.3:28300923-28300942 MS.gene017610:intron 35.0%
TCAGGTGAATATTGTGTTTC+TGG - chr8.3:28303411-28303430 MS.gene017610:intron 35.0%
TTTGTGCCAACCAGAATAAT+GGG + chr8.3:28301939-28301958 None:intergenic 35.0%
! CTGTTTTGTCAAATAAGAGC+TGG - chr8.3:28303294-28303313 MS.gene017610:intron 35.0%
! GATGAGGATATCAGTGTTTT+TGG - chr8.3:28301126-28301145 MS.gene017610:intron 35.0%
! TCATCAAGTGTGTTACTGTT+GGG - chr8.3:28300452-28300471 MS.gene017610:CDS 35.0%
! TTAAGACCTTTGAGTTATCG+TGG - chr8.3:28301634-28301653 MS.gene017610:intron 35.0%
! TTCATCAAGTGTGTTACTGT+TGG - chr8.3:28300451-28300470 MS.gene017610:CDS 35.0%
! TTGAATTTGGAATGTTTGCG+TGG - chr8.3:28300846-28300865 MS.gene017610:CDS 35.0%
! TTTTACCTTCTTGTACACGA+CGG - chr8.3:28303612-28303631 MS.gene017610:intron 35.0%
!! CATAAACTCTGAAACACAGT+GGG + chr8.3:28301735-28301754 None:intergenic 35.0%
!! TTGTTATGATCGTTTTTGGG+TGG - chr8.3:28300645-28300664 MS.gene017610:CDS 35.0%
!!! CATTTTTAGTCAGAATGACG+TGG + chr8.3:28303104-28303123 None:intergenic 35.0%
!!! TTTTGGTTTCTTCTTGACAC+CGG - chr8.3:28302928-28302947 MS.gene017610:intron 35.0%
AATGATGGCATGATGCAGTA+TGG - chr8.3:28303163-28303182 MS.gene017610:intron 40.0%
ACTTTCTAGACGCAAGTACA+TGG + chr8.3:28303010-28303029 None:intergenic 40.0%
AGTGCAAATGTGGTTGTGAA+TGG - chr8.3:28301475-28301494 MS.gene017610:intron 40.0%
ATGCAGTTCAAAATCACAGC+AGG - chr8.3:28303572-28303591 MS.gene017610:intron 40.0%
ATGTTGCAATATGTAGGAGC+CGG + chr8.3:28300979-28300998 None:intergenic 40.0%
CACTGTGAATCTGGGTTTAT+GGG - chr8.3:28301501-28301520 MS.gene017610:intron 40.0%
CCCCACTTATTCACCTTAAT+AGG + chr8.3:28300939-28300958 None:intergenic 40.0%
CGACAATTTCAGTGCAAATG+TGG - chr8.3:28301465-28301484 MS.gene017610:intron 40.0%
CTGAAATTGTCGAAGACAGT+TGG + chr8.3:28301457-28301476 None:intergenic 40.0%
CTTGAAATGAGACAGACCTT+CGG - chr8.3:28303335-28303354 MS.gene017610:intron 40.0%
CTTTGTGCCAACCAGAATAA+TGG + chr8.3:28301940-28301959 None:intergenic 40.0%
GTAGGGATGTTGCAATATGT+AGG + chr8.3:28300985-28301004 None:intergenic 40.0%
GTCATTAGATTCTGGCATTG+TGG - chr8.3:28301335-28301354 MS.gene017610:intron 40.0%
TCTTCTTGACACCGGATAAA+AGG - chr8.3:28302936-28302955 MS.gene017610:intron 40.0%
TGAGCATAGCTCAATTGGTA+GGG + chr8.3:28301002-28301021 None:intergenic 40.0%
TGGCATGCAAGTTATTCACA+TGG + chr8.3:28303207-28303226 None:intergenic 40.0%
TGGTTGAAGGACAACTCTTA+TGG + chr8.3:28303716-28303735 None:intergenic 40.0%
TGTACTTGCGTCTAGAAAGT+AGG - chr8.3:28303010-28303029 MS.gene017610:intron 40.0%
TTCTTGTGAAACAGGACAAG+AGG - chr8.3:28301600-28301619 MS.gene017610:intron 40.0%
TTGAAATGAGACAGACCTTC+GGG - chr8.3:28303336-28303355 MS.gene017610:intron 40.0%
! ACTGCCTAATGCCTTTTATC+CGG + chr8.3:28302950-28302969 None:intergenic 40.0%
! CATCAAGTGTGTTACTGTTG+GGG - chr8.3:28300453-28300472 MS.gene017610:CDS 40.0%
!! AATGGAAGCACTGTGAATCT+GGG - chr8.3:28301493-28301512 MS.gene017610:intron 40.0%
!! GCATAAACTCTGAAACACAG+TGG + chr8.3:28301736-28301755 None:intergenic 40.0%
!! TAGGTGAATTTCTAGCCACT+AGG + chr8.3:28300920-28300939 None:intergenic 40.0%
!! TCTTTTGCTTTGGTGGTTGA+AGG + chr8.3:28303729-28303748 None:intergenic 40.0%
ACCAATTGAGCTATGCTCAC+AGG - chr8.3:28301003-28301022 MS.gene017610:intron 45.0%
ACCTGGTGTTCCCATTATTC+TGG - chr8.3:28301926-28301945 MS.gene017610:intron 45.0%
AGGTGAATAAGTGGGGAATC+CGG - chr8.3:28300943-28300962 MS.gene017610:intron 45.0%
CAAAGGAAACTCTAGCCTAG+TGG - chr8.3:28300902-28300921 MS.gene017610:intron 45.0%
CGCTTTCTCACTCATAAGCA+AGG - chr8.3:28301675-28301694 MS.gene017610:intron 45.0%
CTTAACCGTCGTGTACAAGA+AGG + chr8.3:28303620-28303639 None:intergenic 45.0%
CTTGCGTCTAGAAAGTAGGA+AGG - chr8.3:28303014-28303033 MS.gene017610:intron 45.0%
GCACTGTGAATCTGGGTTTA+TGG - chr8.3:28301500-28301519 MS.gene017610:intron 45.0%
GCACTGTGTACATCGTGAAA+AGG + chr8.3:28301559-28301578 None:intergenic 45.0%
GGTGCATAATGCTTCAACTC+TGG + chr8.3:28301909-28301928 None:intergenic 45.0%
GGTGTTCCCATTATTCTGGT+TGG - chr8.3:28301930-28301949 MS.gene017610:intron 45.0%
GTGAGCATAGCTCAATTGGT+AGG + chr8.3:28301003-28301022 None:intergenic 45.0%
TAATAGGAACAGCACCAGGA+TGG + chr8.3:28303384-28303403 None:intergenic 45.0%
TCAGCACCACGATAACTCAA+AGG + chr8.3:28301643-28301662 None:intergenic 45.0%
TCCTGTGAGCATAGCTCAAT+TGG + chr8.3:28301007-28301026 None:intergenic 45.0%
TGTTGCAATATGTAGGAGCC+GGG + chr8.3:28300978-28300997 None:intergenic 45.0%
! AAGTGTGTTACTGTTGGGGA+TGG - chr8.3:28300457-28300476 MS.gene017610:CDS 45.0%
! ACCAGAATAATGGGAACACC+AGG + chr8.3:28301930-28301949 None:intergenic 45.0%
! ATTCTGGTTGGCACAAAGCT+TGG - chr8.3:28301942-28301961 MS.gene017610:intron 45.0%
! GAGTTGAAGCATTATGCACC+TGG - chr8.3:28301909-28301928 MS.gene017610:intron 45.0%
!! GAATGGAAGCACTGTGAATC+TGG - chr8.3:28301492-28301511 MS.gene017610:intron 45.0%
!! GACACCGGATAAAAGGCATT+AGG - chr8.3:28302943-28302962 MS.gene017610:intron 45.0%
ACGATGTACACAGTGCTGTC+TGG - chr8.3:28301563-28301582 MS.gene017610:intron 50.0%
ACGTGCTGTCTCATTTCCAG+TGG - chr8.3:28301880-28301899 MS.gene017610:intron 50.0%
AGAACTGCTTGTCATCCCGA+AGG + chr8.3:28303354-28303373 None:intergenic 50.0%
CACAATATTCACCTGAGCGG+TGG + chr8.3:28303407-28303426 None:intergenic 50.0%
CAGTTCTTTGTCGACCATCC+TGG - chr8.3:28303367-28303386 MS.gene017610:intron 50.0%
GAAAAAGCTCACAGTGGGGA+AGG + chr8.3:28300527-28300546 None:intergenic 50.0%
GGTGAATAAGTGGGGAATCC+GGG - chr8.3:28300944-28300963 MS.gene017610:intron 50.0%
GTGAATAAGTGGGGAATCCG+GGG - chr8.3:28300945-28300964 MS.gene017610:intron 50.0%
GTGGTAATAGGAACAGCACC+AGG + chr8.3:28303388-28303407 None:intergenic 50.0%
GTTGCAATATGTAGGAGCCG+GGG + chr8.3:28300977-28300996 None:intergenic 50.0%
TCTTGAAGGGAGAAGAGCTC+AGG - chr8.3:28303520-28303539 MS.gene017610:intron 50.0%
TGTTCCTATTACCACCGCTC+AGG - chr8.3:28303393-28303412 MS.gene017610:intron 50.0%
TTCACCTGAGCGGTGGTAAT+AGG + chr8.3:28303400-28303419 None:intergenic 50.0%
TTGAGCTATGCTCACAGGAC+TGG - chr8.3:28301008-28301027 MS.gene017610:intron 50.0%
!! GCTTCAACTCTGGAATCCAC+TGG + chr8.3:28301899-28301918 None:intergenic 50.0%
ACTGTTGGGGATGGAGCTGT+TGG - chr8.3:28300466-28300485 MS.gene017610:CDS 55.0%
CTGGGTTTATGGGACACTGC+AGG - chr8.3:28301511-28301530 MS.gene017610:intron 55.0%
!! CACAGTGGGGAAGGTATTGC+TGG + chr8.3:28300518-28300537 None:intergenic 55.0%
GGAATCCGGGGTTTGAACCC+CGG - chr8.3:28300957-28300976 MS.gene017610:intron 60.0%
AGGAGCCGGGGTTCAAACCC+CGG + chr8.3:28300965-28300984 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 28300436 28303789 28300436 ID=MS.gene017610
chr8.3 mRNA 28300436 28303789 28300436 ID=MS.gene017610.t1;Parent=MS.gene017610
chr8.3 exon 28303691 28303789 28303691 ID=MS.gene017610.t1.exon1;Parent=MS.gene017610.t1
chr8.3 CDS 28303691 28303789 28303691 ID=cds.MS.gene017610.t1;Parent=MS.gene017610.t1
chr8.3 exon 28302693 28302780 28302693 ID=MS.gene017610.t1.exon2;Parent=MS.gene017610.t1
chr8.3 CDS 28302693 28302780 28302693 ID=cds.MS.gene017610.t1;Parent=MS.gene017610.t1
chr8.3 exon 28302502 28302611 28302502 ID=MS.gene017610.t1.exon3;Parent=MS.gene017610.t1
chr8.3 CDS 28302502 28302611 28302502 ID=cds.MS.gene017610.t1;Parent=MS.gene017610.t1
chr8.3 exon 28302262 28302325 28302262 ID=MS.gene017610.t1.exon4;Parent=MS.gene017610.t1
chr8.3 CDS 28302262 28302325 28302262 ID=cds.MS.gene017610.t1;Parent=MS.gene017610.t1
chr8.3 exon 28300811 28300875 28300811 ID=MS.gene017610.t1.exon5;Parent=MS.gene017610.t1
chr8.3 CDS 28300811 28300875 28300811 ID=cds.MS.gene017610.t1;Parent=MS.gene017610.t1
chr8.3 exon 28300632 28300697 28300632 ID=MS.gene017610.t1.exon6;Parent=MS.gene017610.t1
chr8.3 CDS 28300632 28300697 28300632 ID=cds.MS.gene017610.t1;Parent=MS.gene017610.t1
chr8.3 exon 28300436 28300537 28300436 ID=MS.gene017610.t1.exon7;Parent=MS.gene017610.t1
chr8.3 CDS 28300436 28300537 28300436 ID=cds.MS.gene017610.t1;Parent=MS.gene017610.t1
Gene Sequence

>MS.gene017610

ATGAGCGCTTCTAGGTTCATCAAGTGTGTTACTGTTGGGGATGGAGCTGTTGGTAAAACTTGTTTGTTAATTTCATACACCAGCAATACCTTCCCCACTGTGAGCTTTTTCATTTTCCCTTTTCTTTTTAATCTTCTTATGTTTATGTGTTATCGAATTAATTGGAATTGAAATTTCACTAATTTGGATTTTATTTTTTGGTGTTGTTATTGTTATGATCGTTTTTGGGTGGTGTTATGATTGTTGAATTCTAGCTATGAGAAATTTAGTTATAGATGTTGACATCTGGTTAATGATGTTTACGGAAAATTGAGTTGGTTTTCATTTTTTGTTTTAAAGAAACTTACATTTTGAGATGTAACAATTGACTTAATTTATTTCGAATGTTTGTGTGGTTAAACATGAGAAAATTGAATTTGGAATGTTTGCGTGGCAAAACATGAGAAAATTGAAAATTATCTCAATTCAAAGGAAACTCTAGCCTAGTGGCTAGAAATTCACCTATTAAGGTGAATAAGTGGGGAATCCGGGGTTTGAACCCCGGCTCCTACATATTGCAACATCCCTACCAATTGAGCTATGCTCACAGGACTGGTTCATCCTTTTATTATTTGGGCTTAAACATATTTGTAGAATGTTTCAAGCTTTTAGATTGGGTAATTTGTTTCCTTTGAAGTTTTTGCGATAAAAGATGAGGATATCAGTGTTTTTGGTGCTTTGATTTGATTCACATGCATGCAGTGTTGTGATCTTCCCCTTTTTATTTGTTTTTGTTTAAATTCTTCAATTTTTTTGTATGTTTTTTAAGAGTGTGAAAATTACAATGAATGATGTGGGTAATAATAAAATTGTGACAAATGAAATAATTAGATTTTGGTACTAAATGTATCCTTCTACATGTCATTAGATTCTGGCATTGTGGTCCAATGCCTTATTATCATATATGTGCACTTGTTGAAAAAGATAGATGATTGTTATTTTTGCATCTTTTCACTTTGTTTGGAAACAGGATTATGTGCCAACTGTCTTCGACAATTTCAGTGCAAATGTGGTTGTGAATGGAAGCACTGTGAATCTGGGTTTATGGGACACTGCAGGTATCGTTATATAAATTTCTTTTCCTTTTCACGATGTACACAGTGCTGTCTGGATTTTTTATTGTTTTTCTTGTGAAACAGGACAAGAGGATTATAACAGATTAAGACCTTTGAGTTATCGTGGTGCTGATGTTTTCATTCTCGCTTTCTCACTCATAAGCAAGGCCAGTTATGAAAATGTTTCTAAAAAGGTACTTATCCCACTGTGTTTCAGAGTTTATGCTCCTTGTGTCCCATGTTTTTAAAATGCACTTTTGCATATTCCCTTCATATGAATGTGTGGTTTCTTTATAAACTGGAATTAATGATATACTGTTTATATTATAAAAATTGATGATAAATTTCATACGTGCTGTCTCATTTCCAGTGGATTCCAGAGTTGAAGCATTATGCACCTGGTGTTCCCATTATTCTGGTTGGCACAAAGCTTGGTAAGTCTATATCTGGCCAATGTAACATCTGATTTTGTAAATTCATGCATTAGTCAGTTGCTTCCTTCTAGCGTATAAACTAATAAGGTAAATGTTAAGAAACCAAATATAGAAATACTATCTTGGAAGTGGTGTATTCAGCATCTTGAATGTTTAAATATTGCTTTTTTCAACACAAAACTCCTCTTCTATTTCTTTTTTTAATTAGTTAACAAGTGTTTTAAGGGTGCATGTTAGCAAGACCTAATTTATGATGTTATACACAGTTTGTGCTATGAAAGCATATGATCTTAAATATATGAAGTCCATGACCCATTATTGATAATTCTTTTTATGTTAATATTTTAAATGATGACCAGTCTTACTAAAGAGTAACTTCTTGCTTCCGGTTTGTTTTACTAGTTCATCTTGTACCTTTTTTTCCCTTCTCTTATAAGCTTTCATTTCAATTCAAGGTCTCTTTGGATTGACATATTTGAGCTTATCTACCGGCATAAATACTTGTGAGATTATTTGGGTGAACTTATGAACACAACTTTGGCATGTCATAAGTTGTTTTTAGCTTATTTTCATAAGCTCTCAAAGATAGCTTATGAAAACTGCTTATAACTTATAGGGAAACAATTTAACTTTATTTACAGAAACAACTTATAAGTTGCAAGTTAAGTTGCTTATCCAAACAGTTTTTTATTCTTCCAATGTTTTTCAAAACAGTTATGGTCATGTTTTTTGTTTGATGTTACTCTTCTTTCTTGTCTTTCTCTCTATATGGTCTTGTTTTTTTGTTGGATATTACTCTTCTCTTTTGTCTCTATATATTCCAAGATATTTTATACGGTAGGGATTTTATGTAAGTTTACATTTGCTGTCTTGTATTTGCTAATTAATACAGTCACGCATACTCATCCTTATTTAAGTTTTAGATGTTGTTGAACAACATGCATATTTGATGAATTCAACTTTCTTTTGGTTTCTTCTTGACACCGGATAAAAGGCATTAGGCAGTCTTGTACAATGCTAGAGATCTCAGCTATCAAGCTTGACCATGTACTTGCGTCTAGAAAGTAGGAAGGAAGTGTTTGTGAAATGCAAAAGTACAATTTGAAAGTTGTTAATTTAGAATTTTGGTTTGGACTACCACGTCATTCTGACTAAAAATGTCTTAGTATTTGACATTAATTAAAAGGGAAATGGTCATTAATGATGGCATGATGCAGTATGGCATCAATATTTTAGAATGCCATGTGAATAACTTGCATGCCATTTTTTGCTCTATTTGGAGAATGAATAATTGTGTTAAAAGTATTTGTGACCTTTGCATGTTCTTTTACTGTTTTGTCAAATAAGAGCTGGTCCTTAACTATCTTGTGACTTGAAATGAGACAGACCTTCGGGATGACAAGCAGTTCTTTGTCGACCATCCTGGTGCTGTTCCTATTACCACCGCTCAGGTGAATATTGTGTTTCTGGTGCTTTGTTAATTTGTTTTCATACTTTTGCATGTTTGTAATCTATTTTAGCTCTTTAGTTAAATCAAATCTAAGACTTTCATATCTTCTTGAAGGGAGAAGAGCTCAGGAAGCTGATCAATGCACCTGCTTATATTGAATGCAGTTCAAAATCACAGCAGGTACATAATTGAATCTAGTTTTACCTTCTTGTACACGACGGTTAAGTTAATTAGTAATTTAGTCGTTTTAATTTGTTTATGTTTGTTACTGCAGAACGTGAAAGCAGTCTTTGATGCAGCCATAAGAGTTGTCCTTCAACCACCAAAGCAAAAGAAAAAGAAGAGTAAAGCTCAAAAGGCCTGTTCGATATTGTGA
Protein sequence

>MS.gene017610.t1

MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFVDHPGAVPITTAQGEELRKLINAPAYIECSSKSQQNVKAVFDAAIRVVLQPPKQKKKKSKAQKACSIL