Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59498.t1 | XP_003612214.1 | 100 | 197 | 0 | 0 | 1 | 197 | 1 | 197 | 1.60E-107 | 398.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59498.t1 | Q35638 | 97.5 | 197 | 5 | 0 | 1 | 197 | 1 | 197 | 3.1e-107 | 389.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59498.t1 | Q8S2V3 | 100.0 | 197 | 0 | 0 | 1 | 197 | 1 | 197 | 1.2e-107 | 398.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052256 | MS.gene59498 | 0.800649 | 1.31E-48 | -1.69E-46 |
| MS.gene053520 | MS.gene59498 | 0.811021 | 8.62E-51 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59498.t1 | MTR_5g022600 | 100.000 | 197 | 0 | 0 | 1 | 197 | 1 | 197 | 3.04e-147 | 407 |
| MS.gene59498.t1 | MTR_8g075240 | 97.462 | 197 | 5 | 0 | 1 | 197 | 1 | 197 | 1.39e-143 | 397 |
| MS.gene59498.t1 | MTR_4g073250 | 89.340 | 197 | 21 | 0 | 1 | 197 | 1 | 197 | 2.44e-133 | 372 |
| MS.gene59498.t1 | MTR_3g078260 | 77.835 | 194 | 42 | 1 | 2 | 194 | 4 | 197 | 1.79e-116 | 330 |
| MS.gene59498.t1 | MTR_2g090875 | 84.270 | 178 | 28 | 0 | 1 | 178 | 1 | 178 | 1.01e-115 | 327 |
| MS.gene59498.t1 | MTR_4g088055 | 84.831 | 178 | 27 | 0 | 1 | 178 | 1 | 178 | 6.46e-115 | 325 |
| MS.gene59498.t1 | MTR_6g087980 | 74.874 | 199 | 47 | 1 | 1 | 196 | 1 | 199 | 1.78e-111 | 317 |
| MS.gene59498.t1 | MTR_3g078260 | 86.555 | 119 | 16 | 0 | 2 | 120 | 4 | 122 | 4.03e-76 | 225 |
| MS.gene59498.t1 | MTR_7g103070 | 30.851 | 188 | 116 | 5 | 8 | 192 | 18 | 194 | 1.40e-25 | 98.6 |
| MS.gene59498.t1 | MTR_1g068740 | 31.383 | 188 | 116 | 6 | 6 | 191 | 15 | 191 | 9.67e-25 | 96.7 |
| MS.gene59498.t1 | MTR_1g068730 | 31.383 | 188 | 116 | 6 | 6 | 191 | 15 | 191 | 1.68e-24 | 95.9 |
| MS.gene59498.t1 | MTR_1g115325 | 32.386 | 176 | 106 | 6 | 6 | 179 | 15 | 179 | 2.05e-24 | 95.9 |
| MS.gene59498.t1 | MTR_7g100020 | 30.851 | 188 | 117 | 6 | 6 | 191 | 15 | 191 | 4.95e-24 | 94.7 |
| MS.gene59498.t1 | MTR_8g093740 | 30.726 | 179 | 109 | 5 | 6 | 181 | 13 | 179 | 3.38e-23 | 92.4 |
| MS.gene59498.t1 | MTR_3g096350 | 29.630 | 189 | 118 | 5 | 7 | 192 | 13 | 189 | 5.39e-23 | 91.7 |
| MS.gene59498.t1 | MTR_1g068730 | 34.109 | 129 | 82 | 3 | 6 | 132 | 15 | 142 | 1.08e-22 | 90.1 |
| MS.gene59498.t1 | MTR_1g094220 | 31.461 | 178 | 105 | 7 | 7 | 180 | 32 | 196 | 1.12e-22 | 90.9 |
| MS.gene59498.t1 | MTR_1g062760 | 30.899 | 178 | 108 | 5 | 7 | 181 | 15 | 180 | 1.84e-22 | 90.5 |
| MS.gene59498.t1 | MTR_8g031870 | 30.814 | 172 | 105 | 5 | 1 | 170 | 1 | 160 | 2.21e-22 | 89.7 |
| MS.gene59498.t1 | MTR_1g094220 | 32.544 | 169 | 97 | 7 | 7 | 171 | 32 | 187 | 3.57e-22 | 89.7 |
| MS.gene59498.t1 | MTR_8g006970 | 33.136 | 169 | 99 | 6 | 6 | 172 | 8 | 164 | 4.57e-22 | 88.6 |
| MS.gene59498.t1 | MTR_8g006970 | 33.516 | 182 | 102 | 8 | 6 | 180 | 22 | 191 | 4.70e-22 | 89.7 |
| MS.gene59498.t1 | MTR_1g094220 | 32.544 | 169 | 97 | 7 | 7 | 171 | 32 | 187 | 5.18e-22 | 89.4 |
| MS.gene59498.t1 | MTR_1g068740 | 33.333 | 141 | 86 | 4 | 6 | 139 | 15 | 154 | 6.16e-22 | 89.0 |
| MS.gene59498.t1 | MTR_1g029450 | 30.726 | 179 | 109 | 5 | 6 | 181 | 17 | 183 | 6.39e-22 | 89.4 |
| MS.gene59498.t1 | MTR_4g063160 | 32.022 | 178 | 106 | 7 | 6 | 179 | 15 | 181 | 9.43e-22 | 88.6 |
| MS.gene59498.t1 | MTR_1g094220 | 32.164 | 171 | 99 | 7 | 7 | 173 | 32 | 189 | 1.04e-21 | 89.0 |
| MS.gene59498.t1 | MTR_8g103550 | 31.111 | 180 | 109 | 6 | 8 | 184 | 11 | 178 | 1.81e-21 | 87.4 |
| MS.gene59498.t1 | MTR_7g081700 | 31.016 | 187 | 110 | 7 | 6 | 185 | 8 | 182 | 1.96e-21 | 87.4 |
| MS.gene59498.t1 | MTR_4g098950 | 32.727 | 165 | 97 | 5 | 8 | 170 | 11 | 163 | 2.63e-21 | 87.4 |
| MS.gene59498.t1 | MTR_2g005500 | 30.857 | 175 | 104 | 6 | 1 | 170 | 1 | 163 | 3.57e-21 | 87.0 |
| MS.gene59498.t1 | MTR_3g064390 | 32.961 | 179 | 105 | 5 | 8 | 183 | 12 | 178 | 1.15e-20 | 85.5 |
| MS.gene59498.t1 | MTR_2g083860 | 29.282 | 181 | 114 | 5 | 6 | 184 | 13 | 181 | 1.29e-20 | 85.9 |
| MS.gene59498.t1 | MTR_8g031830 | 30.409 | 171 | 105 | 5 | 1 | 169 | 1 | 159 | 1.87e-20 | 85.1 |
| MS.gene59498.t1 | MTR_5g013900 | 32.727 | 165 | 97 | 5 | 8 | 170 | 11 | 163 | 2.53e-20 | 84.7 |
| MS.gene59498.t1 | MTR_2g096550 | 29.891 | 184 | 114 | 6 | 6 | 185 | 15 | 187 | 3.27e-20 | 84.7 |
| MS.gene59498.t1 | MTR_8g027220 | 38.655 | 119 | 70 | 3 | 8 | 124 | 28 | 145 | 3.44e-20 | 85.1 |
| MS.gene59498.t1 | MTR_6g021790 | 27.624 | 181 | 117 | 5 | 1 | 179 | 1 | 169 | 3.49e-20 | 84.3 |
| MS.gene59498.t1 | MTR_8g031660 | 29.651 | 172 | 107 | 5 | 1 | 170 | 1 | 160 | 4.41e-20 | 84.3 |
| MS.gene59498.t1 | MTR_2g027660 | 27.907 | 172 | 110 | 5 | 1 | 170 | 1 | 160 | 4.94e-20 | 84.0 |
| MS.gene59498.t1 | MTR_8g031680 | 28.488 | 172 | 109 | 5 | 1 | 170 | 1 | 160 | 9.29e-20 | 83.2 |
| MS.gene59498.t1 | MTR_2g102060 | 30.909 | 165 | 100 | 5 | 8 | 170 | 12 | 164 | 1.82e-19 | 82.4 |
| MS.gene59498.t1 | MTR_7g117910 | 36.364 | 121 | 74 | 3 | 8 | 126 | 22 | 141 | 2.31e-19 | 82.4 |
| MS.gene59498.t1 | MTR_5g076590 | 31.515 | 165 | 99 | 4 | 8 | 170 | 12 | 164 | 2.91e-19 | 81.6 |
| MS.gene59498.t1 | MTR_4g079350 | 35.606 | 132 | 82 | 3 | 6 | 135 | 13 | 143 | 4.90e-19 | 81.6 |
| MS.gene59498.t1 | MTR_1g097420 | 30.729 | 192 | 116 | 7 | 1 | 184 | 1 | 183 | 5.37e-19 | 81.3 |
| MS.gene59498.t1 | MTR_3g087160 | 30.909 | 165 | 100 | 4 | 8 | 170 | 11 | 163 | 5.72e-19 | 81.3 |
| MS.gene59498.t1 | MTR_4g088090 | 29.834 | 181 | 113 | 5 | 6 | 184 | 13 | 181 | 5.92e-19 | 81.3 |
| MS.gene59498.t1 | MTR_2g005510 | 30.994 | 171 | 104 | 5 | 6 | 174 | 15 | 173 | 6.25e-19 | 81.3 |
| MS.gene59498.t1 | MTR_3g069510 | 29.834 | 181 | 113 | 5 | 6 | 184 | 12 | 180 | 7.01e-19 | 81.3 |
| MS.gene59498.t1 | MTR_2g075950 | 35.833 | 120 | 74 | 3 | 6 | 123 | 13 | 131 | 7.37e-19 | 81.3 |
| MS.gene59498.t1 | MTR_1g052475 | 32.530 | 166 | 98 | 5 | 7 | 170 | 16 | 169 | 7.97e-19 | 81.3 |
| MS.gene59498.t1 | MTR_8g090215 | 31.515 | 165 | 99 | 5 | 8 | 170 | 11 | 163 | 8.42e-19 | 80.9 |
| MS.gene59498.t1 | MTR_2g014990 | 35.833 | 120 | 74 | 3 | 6 | 123 | 13 | 131 | 1.35e-18 | 80.5 |
| MS.gene59498.t1 | MTR_1g090717 | 28.804 | 184 | 116 | 5 | 7 | 186 | 16 | 188 | 1.68e-18 | 80.1 |
| MS.gene59498.t1 | MTR_7g051940 | 28.947 | 190 | 121 | 5 | 6 | 193 | 13 | 190 | 2.17e-18 | 79.7 |
| MS.gene59498.t1 | MTR_0262s0050 | 31.928 | 166 | 99 | 6 | 7 | 170 | 16 | 169 | 3.40e-18 | 79.3 |
| MS.gene59498.t1 | MTR_3g064390 | 36.066 | 122 | 75 | 3 | 8 | 127 | 12 | 132 | 4.94e-18 | 77.4 |
| MS.gene59498.t1 | MTR_8g089985 | 31.515 | 165 | 99 | 5 | 8 | 170 | 19 | 171 | 8.67e-18 | 78.6 |
| MS.gene59498.t1 | MTR_2g101890 | 29.032 | 186 | 117 | 6 | 6 | 185 | 10 | 186 | 1.77e-17 | 77.4 |
| MS.gene59498.t1 | MTR_7g405790 | 28.947 | 190 | 121 | 5 | 6 | 193 | 15 | 192 | 1.96e-17 | 77.4 |
| MS.gene59498.t1 | MTR_3g096350 | 34.746 | 118 | 73 | 3 | 7 | 121 | 13 | 129 | 2.33e-17 | 75.9 |
| MS.gene59498.t1 | MTR_3g096350 | 34.746 | 118 | 73 | 3 | 7 | 121 | 13 | 129 | 2.39e-17 | 75.5 |
| MS.gene59498.t1 | MTR_4g069850 | 27.957 | 186 | 119 | 5 | 6 | 185 | 8 | 184 | 3.40e-17 | 76.6 |
| MS.gene59498.t1 | MTR_3g086980 | 31.325 | 166 | 98 | 6 | 8 | 170 | 18 | 170 | 3.90e-17 | 76.6 |
| MS.gene59498.t1 | MTR_8g107070 | 35.294 | 119 | 74 | 3 | 6 | 122 | 14 | 131 | 5.20e-17 | 77.0 |
| MS.gene59498.t1 | MTR_4g064897 | 29.341 | 167 | 104 | 5 | 6 | 170 | 12 | 166 | 7.60e-17 | 75.9 |
| MS.gene59498.t1 | MTR_1g078200 | 30.114 | 176 | 105 | 6 | 6 | 177 | 14 | 175 | 7.90e-17 | 75.9 |
| MS.gene59498.t1 | MTR_8g036220 | 31.138 | 167 | 101 | 6 | 6 | 170 | 16 | 170 | 8.06e-17 | 75.9 |
| MS.gene59498.t1 | MTR_4g012940 | 28.497 | 193 | 121 | 7 | 1 | 185 | 1 | 184 | 1.14e-16 | 75.1 |
| MS.gene59498.t1 | MTR_2g090865 | 36.667 | 120 | 73 | 3 | 6 | 123 | 11 | 129 | 2.23e-16 | 74.3 |
| MS.gene59498.t1 | MTR_8g092020 | 28.235 | 170 | 109 | 3 | 6 | 170 | 12 | 173 | 3.31e-16 | 73.9 |
| MS.gene59498.t1 | MTR_8g093740 | 28.395 | 162 | 92 | 4 | 22 | 181 | 7 | 146 | 8.87e-16 | 72.0 |
| MS.gene59498.t1 | MTR_6g079550 | 33.065 | 124 | 80 | 3 | 6 | 127 | 12 | 134 | 1.24e-15 | 72.4 |
| MS.gene59498.t1 | MTR_7g103070 | 29.927 | 137 | 83 | 4 | 47 | 181 | 2 | 127 | 2.01e-15 | 70.9 |
| MS.gene59498.t1 | MTR_1g097420 | 30.460 | 174 | 106 | 6 | 17 | 184 | 46 | 210 | 2.02e-15 | 72.4 |
| MS.gene59498.t1 | MTR_7g094810 | 28.877 | 187 | 99 | 4 | 7 | 180 | 9 | 174 | 5.75e-15 | 72.8 |
| MS.gene59498.t1 | MTR_7g094810 | 28.877 | 187 | 99 | 4 | 7 | 180 | 9 | 174 | 5.99e-15 | 72.8 |
| MS.gene59498.t1 | MTR_7g094810 | 28.877 | 187 | 99 | 4 | 7 | 180 | 9 | 174 | 6.00e-15 | 72.8 |
| MS.gene59498.t1 | MTR_7g094810 | 28.877 | 187 | 99 | 4 | 7 | 180 | 9 | 174 | 6.50e-15 | 72.8 |
| MS.gene59498.t1 | MTR_7g094810 | 28.877 | 187 | 99 | 4 | 7 | 180 | 9 | 174 | 7.01e-15 | 72.4 |
| MS.gene59498.t1 | MTR_3g107717 | 28.485 | 165 | 103 | 4 | 7 | 170 | 14 | 164 | 8.94e-14 | 67.4 |
| MS.gene59498.t1 | MTR_3g107707 | 28.485 | 165 | 103 | 4 | 7 | 170 | 14 | 164 | 9.22e-14 | 67.4 |
| MS.gene59498.t1 | MTR_3g107713 | 28.485 | 165 | 103 | 4 | 7 | 170 | 14 | 164 | 1.03e-13 | 67.4 |
| MS.gene59498.t1 | MTR_1g072280 | 27.604 | 192 | 95 | 6 | 7 | 180 | 13 | 178 | 1.08e-13 | 69.3 |
| MS.gene59498.t1 | MTR_4g099470 | 30.137 | 146 | 88 | 5 | 29 | 172 | 7 | 140 | 1.69e-13 | 65.9 |
| MS.gene59498.t1 | MTR_1g082870 | 28.571 | 175 | 115 | 4 | 7 | 180 | 17 | 182 | 1.08e-12 | 66.2 |
| MS.gene59498.t1 | MTR_4g113620 | 27.966 | 118 | 76 | 3 | 7 | 124 | 14 | 122 | 4.73e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59498.t1 | AT2G17800 | 95.431 | 197 | 9 | 0 | 1 | 197 | 1 | 197 | 7.79e-128 | 358 |
| MS.gene59498.t1 | AT2G17800 | 95.431 | 197 | 9 | 0 | 1 | 197 | 1 | 197 | 7.79e-128 | 358 |
| MS.gene59498.t1 | AT3G51300 | 95.431 | 197 | 9 | 0 | 1 | 197 | 1 | 197 | 1.35e-127 | 357 |
| MS.gene59498.t1 | AT4G35950 | 95.939 | 197 | 8 | 0 | 1 | 197 | 1 | 197 | 1.36e-127 | 357 |
| MS.gene59498.t1 | AT4G35020 | 87.374 | 198 | 24 | 1 | 1 | 197 | 1 | 198 | 2.24e-124 | 349 |
| MS.gene59498.t1 | AT4G35020 | 87.374 | 198 | 24 | 1 | 1 | 197 | 1 | 198 | 2.24e-124 | 349 |
| MS.gene59498.t1 | AT4G35020 | 87.374 | 198 | 24 | 1 | 1 | 197 | 1 | 198 | 2.24e-124 | 349 |
| MS.gene59498.t1 | AT1G75840 | 91.573 | 178 | 15 | 0 | 1 | 178 | 1 | 178 | 5.14e-122 | 343 |
| MS.gene59498.t1 | AT1G20090 | 90.341 | 176 | 17 | 0 | 3 | 178 | 2 | 177 | 2.97e-119 | 336 |
| MS.gene59498.t1 | AT5G45970 | 86.034 | 179 | 25 | 0 | 1 | 179 | 1 | 179 | 1.64e-117 | 332 |
| MS.gene59498.t1 | AT4G28950 | 75.500 | 200 | 43 | 2 | 1 | 196 | 1 | 198 | 2.53e-111 | 317 |
| MS.gene59498.t1 | AT5G62880 | 80.447 | 179 | 35 | 0 | 2 | 180 | 4 | 182 | 8.35e-111 | 315 |
| MS.gene59498.t1 | AT3G48040 | 80.447 | 179 | 35 | 0 | 2 | 180 | 4 | 182 | 8.60e-110 | 313 |
| MS.gene59498.t1 | AT2G44690 | 75.000 | 192 | 48 | 0 | 6 | 197 | 18 | 209 | 2.30e-106 | 304 |
| MS.gene59498.t1 | AT5G62880 | 79.070 | 172 | 32 | 1 | 2 | 173 | 4 | 171 | 5.06e-103 | 295 |
| MS.gene59498.t1 | AT3G48040 | 80.368 | 163 | 32 | 0 | 2 | 164 | 4 | 166 | 4.15e-100 | 287 |
| MS.gene59498.t1 | AT3G51290 | 95.122 | 164 | 8 | 0 | 34 | 197 | 635 | 798 | 1.70e-96 | 297 |
| MS.gene59498.t1 | AT4G35020 | 92.500 | 120 | 9 | 0 | 1 | 120 | 1 | 120 | 9.44e-82 | 239 |
| MS.gene59498.t1 | AT4G35020 | 92.500 | 120 | 9 | 0 | 1 | 120 | 1 | 120 | 9.44e-82 | 239 |
| MS.gene59498.t1 | AT3G46060 | 32.386 | 176 | 106 | 6 | 6 | 179 | 15 | 179 | 7.75e-24 | 94.4 |
| MS.gene59498.t1 | AT3G46060 | 32.386 | 176 | 106 | 6 | 6 | 179 | 15 | 179 | 7.75e-24 | 94.4 |
| MS.gene59498.t1 | AT3G46060 | 32.386 | 176 | 106 | 6 | 6 | 179 | 15 | 179 | 7.75e-24 | 94.4 |
| MS.gene59498.t1 | AT3G54840 | 33.333 | 168 | 97 | 6 | 7 | 171 | 34 | 189 | 8.64e-24 | 93.6 |
| MS.gene59498.t1 | AT3G54840 | 32.143 | 168 | 99 | 5 | 7 | 171 | 34 | 189 | 9.26e-24 | 93.6 |
| MS.gene59498.t1 | AT3G54840 | 31.928 | 166 | 98 | 5 | 9 | 171 | 2 | 155 | 3.52e-23 | 91.3 |
| MS.gene59498.t1 | AT1G02130 | 32.544 | 169 | 100 | 6 | 6 | 172 | 8 | 164 | 8.23e-23 | 91.3 |
| MS.gene59498.t1 | AT3G53610 | 31.737 | 167 | 101 | 6 | 6 | 170 | 15 | 170 | 1.01e-22 | 91.3 |
| MS.gene59498.t1 | AT3G53610 | 31.737 | 167 | 101 | 6 | 6 | 170 | 15 | 170 | 1.01e-22 | 91.3 |
| MS.gene59498.t1 | AT3G53610 | 31.737 | 167 | 101 | 6 | 6 | 170 | 15 | 170 | 1.01e-22 | 91.3 |
| MS.gene59498.t1 | AT5G45130 | 33.333 | 165 | 96 | 4 | 8 | 170 | 12 | 164 | 1.07e-22 | 90.9 |
| MS.gene59498.t1 | AT5G59840 | 31.737 | 167 | 101 | 5 | 6 | 170 | 15 | 170 | 1.39e-22 | 90.9 |
| MS.gene59498.t1 | AT4G19640 | 33.333 | 165 | 96 | 4 | 8 | 170 | 12 | 164 | 2.42e-22 | 90.1 |
| MS.gene59498.t1 | AT1G43890 | 30.168 | 179 | 110 | 5 | 6 | 181 | 13 | 179 | 2.43e-22 | 90.1 |
| MS.gene59498.t1 | AT1G43890 | 30.168 | 179 | 110 | 5 | 6 | 181 | 13 | 179 | 2.43e-22 | 90.1 |
| MS.gene59498.t1 | AT1G43890 | 30.168 | 179 | 110 | 5 | 6 | 181 | 13 | 179 | 2.43e-22 | 90.1 |
| MS.gene59498.t1 | AT1G16920 | 32.418 | 182 | 109 | 6 | 6 | 185 | 13 | 182 | 2.91e-22 | 90.1 |
| MS.gene59498.t1 | AT5G45130 | 33.129 | 163 | 95 | 4 | 10 | 170 | 22 | 172 | 5.42e-22 | 89.4 |
| MS.gene59498.t1 | AT1G73640 | 32.984 | 191 | 110 | 6 | 6 | 190 | 13 | 191 | 1.92e-21 | 88.6 |
| MS.gene59498.t1 | AT2G44610 | 33.333 | 165 | 96 | 5 | 8 | 170 | 11 | 163 | 2.21e-21 | 87.8 |
| MS.gene59498.t1 | AT5G03530 | 28.191 | 188 | 120 | 5 | 8 | 192 | 15 | 190 | 2.33e-21 | 87.8 |
| MS.gene59498.t1 | AT5G03530 | 28.191 | 188 | 120 | 5 | 8 | 192 | 15 | 190 | 2.33e-21 | 87.8 |
| MS.gene59498.t1 | AT4G18430 | 32.597 | 181 | 108 | 5 | 6 | 184 | 13 | 181 | 4.00e-21 | 87.0 |
| MS.gene59498.t1 | AT4G35860 | 27.624 | 181 | 117 | 5 | 1 | 179 | 1 | 169 | 1.08e-20 | 85.9 |
| MS.gene59498.t1 | AT4G17530 | 31.016 | 187 | 110 | 7 | 6 | 185 | 8 | 182 | 1.74e-20 | 85.1 |
| MS.gene59498.t1 | AT4G39890 | 34.731 | 167 | 92 | 6 | 8 | 170 | 11 | 164 | 1.77e-20 | 85.5 |
| MS.gene59498.t1 | AT5G47200 | 31.319 | 182 | 106 | 7 | 6 | 180 | 8 | 177 | 2.95e-20 | 84.7 |
| MS.gene59498.t1 | AT3G11730 | 29.940 | 167 | 103 | 5 | 6 | 170 | 8 | 162 | 3.28e-20 | 84.3 |
| MS.gene59498.t1 | AT2G22290 | 33.333 | 165 | 96 | 5 | 8 | 170 | 11 | 163 | 3.48e-20 | 84.3 |
| MS.gene59498.t1 | AT1G06400 | 32.335 | 167 | 99 | 5 | 6 | 170 | 13 | 167 | 6.54e-20 | 84.0 |
| MS.gene59498.t1 | AT4G19640 | 36.885 | 122 | 74 | 3 | 8 | 127 | 12 | 132 | 8.66e-20 | 82.0 |
| MS.gene59498.t1 | AT4G18800 | 36.667 | 120 | 73 | 3 | 6 | 123 | 13 | 131 | 9.28e-20 | 83.6 |
| MS.gene59498.t1 | AT1G09630 | 31.492 | 181 | 110 | 5 | 6 | 184 | 12 | 180 | 9.33e-20 | 83.6 |
| MS.gene59498.t1 | AT3G15060 | 31.285 | 179 | 109 | 5 | 8 | 184 | 15 | 181 | 1.61e-19 | 82.8 |
| MS.gene59498.t1 | AT4G17170 | 27.326 | 172 | 111 | 5 | 1 | 170 | 1 | 160 | 2.11e-19 | 82.4 |
| MS.gene59498.t1 | AT4G19640 | 34.074 | 135 | 86 | 3 | 8 | 140 | 12 | 145 | 2.61e-19 | 82.0 |
| MS.gene59498.t1 | AT2G31680 | 29.670 | 182 | 114 | 4 | 6 | 185 | 12 | 181 | 2.67e-19 | 82.4 |
| MS.gene59498.t1 | AT3G09900 | 32.934 | 167 | 99 | 6 | 6 | 170 | 15 | 170 | 3.20e-19 | 82.0 |
| MS.gene59498.t1 | AT3G07410 | 30.526 | 190 | 118 | 5 | 6 | 193 | 12 | 189 | 3.21e-19 | 82.0 |
| MS.gene59498.t1 | AT4G17160 | 26.744 | 172 | 112 | 5 | 1 | 170 | 1 | 160 | 3.59e-19 | 81.6 |
| MS.gene59498.t1 | AT1G18200 | 30.387 | 181 | 112 | 6 | 6 | 184 | 13 | 181 | 5.58e-19 | 81.6 |
| MS.gene59498.t1 | AT5G60860 | 30.387 | 181 | 112 | 5 | 6 | 184 | 13 | 181 | 5.70e-19 | 81.6 |
| MS.gene59498.t1 | AT2G43130 | 29.121 | 182 | 115 | 5 | 6 | 185 | 12 | 181 | 5.73e-19 | 81.3 |
| MS.gene59498.t1 | AT3G12160 | 32.530 | 166 | 98 | 5 | 7 | 170 | 16 | 169 | 5.75e-19 | 81.6 |
| MS.gene59498.t1 | AT5G45750 | 35.833 | 120 | 74 | 3 | 6 | 123 | 13 | 131 | 6.15e-19 | 81.3 |
| MS.gene59498.t1 | AT3G18820 | 29.570 | 186 | 116 | 6 | 6 | 185 | 8 | 184 | 7.09e-19 | 80.9 |
| MS.gene59498.t1 | AT5G03520 | 33.533 | 167 | 98 | 6 | 6 | 170 | 15 | 170 | 8.41e-19 | 80.9 |
| MS.gene59498.t1 | AT1G01200 | 34.132 | 167 | 95 | 6 | 7 | 170 | 29 | 183 | 1.62e-18 | 80.9 |
| MS.gene59498.t1 | AT1G28550 | 37.500 | 120 | 72 | 3 | 6 | 123 | 13 | 131 | 1.67e-18 | 80.1 |
| MS.gene59498.t1 | AT5G10260 | 32.121 | 165 | 98 | 5 | 8 | 170 | 11 | 163 | 2.06e-18 | 79.7 |
| MS.gene59498.t1 | AT1G05810 | 30.994 | 171 | 104 | 5 | 6 | 174 | 58 | 216 | 2.90e-18 | 80.5 |
| MS.gene59498.t1 | AT1G05810 | 29.670 | 182 | 114 | 5 | 6 | 185 | 12 | 181 | 3.18e-18 | 79.7 |
| MS.gene59498.t1 | AT2G33870 | 37.815 | 119 | 71 | 3 | 6 | 122 | 13 | 130 | 4.87e-18 | 79.0 |
| MS.gene59498.t1 | AT5G64990 | 33.333 | 165 | 96 | 5 | 8 | 170 | 9 | 161 | 7.38e-18 | 78.2 |
| MS.gene59498.t1 | AT5G47520 | 28.652 | 178 | 113 | 5 | 2 | 177 | 10 | 175 | 1.81e-17 | 77.4 |
| MS.gene59498.t1 | AT1G22740 | 29.167 | 192 | 119 | 6 | 1 | 184 | 1 | 183 | 2.41e-17 | 77.0 |
| MS.gene59498.t1 | AT1G52280 | 30.726 | 179 | 107 | 7 | 1 | 171 | 1 | 170 | 5.13e-17 | 76.3 |
| MS.gene59498.t1 | AT2G21880 | 27.174 | 184 | 121 | 4 | 6 | 184 | 9 | 184 | 9.30e-17 | 75.5 |
| MS.gene59498.t1 | AT4G39990 | 32.787 | 122 | 79 | 3 | 7 | 126 | 18 | 138 | 1.07e-16 | 75.5 |
| MS.gene59498.t1 | AT1G07410 | 34.454 | 119 | 75 | 3 | 6 | 122 | 12 | 129 | 1.24e-16 | 75.1 |
| MS.gene59498.t1 | AT5G59150 | 29.240 | 171 | 107 | 6 | 6 | 174 | 12 | 170 | 1.53e-16 | 75.1 |
| MS.gene59498.t1 | AT3G16100 | 29.947 | 187 | 114 | 7 | 1 | 179 | 1 | 178 | 1.82e-16 | 74.7 |
| MS.gene59498.t1 | AT5G47960 | 33.051 | 118 | 76 | 3 | 7 | 122 | 16 | 132 | 2.11e-16 | 74.7 |
| MS.gene59498.t1 | AT5G65270 | 28.729 | 181 | 113 | 6 | 7 | 184 | 18 | 185 | 2.26e-16 | 74.7 |
| MS.gene59498.t1 | AT4G09720 | 30.409 | 171 | 104 | 6 | 6 | 170 | 8 | 169 | 5.30e-16 | 73.2 |
| MS.gene59498.t1 | AT3G09910 | 28.652 | 178 | 112 | 5 | 7 | 181 | 14 | 179 | 1.06e-15 | 72.4 |
| MS.gene59498.t1 | AT3G09910 | 28.652 | 178 | 112 | 5 | 7 | 181 | 14 | 179 | 1.06e-15 | 72.4 |
| MS.gene59498.t1 | AT3G09910 | 28.652 | 178 | 112 | 5 | 7 | 181 | 14 | 179 | 1.06e-15 | 72.4 |
| MS.gene59498.t1 | AT5G27540 | 25.862 | 174 | 121 | 2 | 7 | 180 | 18 | 183 | 1.09e-15 | 75.1 |
| MS.gene59498.t1 | AT5G27540 | 25.862 | 174 | 121 | 2 | 7 | 180 | 18 | 183 | 1.09e-15 | 75.1 |
| MS.gene59498.t1 | AT3G46830 | 32.773 | 119 | 77 | 3 | 6 | 122 | 12 | 129 | 1.36e-15 | 72.4 |
| MS.gene59498.t1 | AT3G46830 | 32.773 | 119 | 77 | 3 | 6 | 122 | 12 | 129 | 1.36e-15 | 72.4 |
| MS.gene59498.t1 | AT1G49300 | 29.825 | 171 | 105 | 6 | 6 | 170 | 8 | 169 | 1.48e-15 | 72.0 |
| MS.gene59498.t1 | AT1G49300 | 29.825 | 171 | 105 | 6 | 6 | 170 | 8 | 169 | 1.48e-15 | 72.0 |
| MS.gene59498.t1 | AT5G64990 | 31.977 | 172 | 96 | 6 | 8 | 170 | 9 | 168 | 3.83e-15 | 71.2 |
| MS.gene59498.t1 | AT5G55080 | 30.769 | 117 | 79 | 2 | 7 | 122 | 14 | 129 | 6.66e-15 | 70.9 |
| MS.gene59498.t1 | AT3G09910 | 29.282 | 181 | 110 | 6 | 7 | 181 | 14 | 182 | 8.89e-15 | 69.7 |
| MS.gene59498.t1 | AT3G09910 | 29.282 | 181 | 110 | 6 | 7 | 181 | 14 | 182 | 8.89e-15 | 69.7 |
| MS.gene59498.t1 | AT4G09720 | 28.409 | 176 | 106 | 5 | 6 | 170 | 8 | 174 | 1.41e-14 | 69.7 |
| MS.gene59498.t1 | AT3G63150 | 30.286 | 175 | 112 | 5 | 7 | 180 | 15 | 180 | 2.28e-14 | 71.2 |
| MS.gene59498.t1 | AT5G20020 | 28.485 | 165 | 103 | 4 | 7 | 170 | 14 | 164 | 8.29e-14 | 67.8 |
| MS.gene59498.t1 | AT5G20010 | 28.485 | 165 | 103 | 4 | 7 | 170 | 14 | 164 | 9.08e-14 | 67.8 |
| MS.gene59498.t1 | AT5G55190 | 31.092 | 119 | 80 | 2 | 7 | 124 | 14 | 131 | 9.46e-14 | 67.4 |
| MS.gene59498.t1 | AT4G09720 | 27.473 | 182 | 106 | 5 | 6 | 170 | 8 | 180 | 1.14e-13 | 67.4 |
| MS.gene59498.t1 | AT5G03520 | 30.137 | 146 | 90 | 5 | 47 | 191 | 47 | 181 | 1.87e-12 | 63.9 |
| MS.gene59498.t1 | AT4G35860 | 25.373 | 134 | 87 | 4 | 47 | 179 | 2 | 123 | 9.80e-12 | 61.2 |
Find 47 sgRNAs with CRISPR-Local
Find 165 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGTTCCAACCAGAATTA+TGG | 0.197915 | 5.4:-14093029 | None:intergenic |
| AGTGCGAATGTGGTTGTTAA+TGG | 0.319066 | 5.4:+14092576 | MS.gene59498:CDS |
| TAATGGAAGTATTGTGAATC+TGG | 0.328007 | 5.4:+14092593 | MS.gene59498:CDS |
| TCTTCTGCTTTGGTGGTTGA+AGG | 0.339738 | 5.4:-14093949 | None:intergenic |
| TTTGTTCCAACCAGAATTAT+GGG | 0.374664 | 5.4:-14093028 | None:intergenic |
| TGGTTGAAGGACAACTCTTA+TGG | 0.386728 | 5.4:-14093936 | None:intergenic |
| TTATGAAAATGTCTCCAAAA+AGG | 0.394383 | 5.4:+14092810 | MS.gene59498:CDS |
| TTGTATCGAGATAGACCTTC+GGG | 0.409474 | 5.4:+14093586 | MS.gene59498:intron |
| ATCACCTGAGCTGTGGTAAT+GGG | 0.421707 | 5.4:-14093647 | None:intergenic |
| AACCGTGGGGAAAGTATTGC+TGG | 0.429322 | 5.4:-14091932 | None:intergenic |
| AAAGAAGAATAAAGCACAAA+AGG | 0.449553 | 5.4:+14093973 | MS.gene59498:CDS |
| AATCACCTGAGCTGTGGTAA+TGG | 0.454383 | 5.4:-14093648 | None:intergenic |
| ACCTGGTGTCCCCATAATTC+TGG | 0.467734 | 5.4:+14093018 | MS.gene59498:CDS |
| GGTGCATAATGCTTCAACTC+TGG | 0.481713 | 5.4:-14092998 | None:intergenic |
| AGTGAATTACAATATTGAAC+AGG | 0.490190 | 5.4:-14093996 | None:intergenic |
| ATTCTGGTTGGAACAAAGCT+TGG | 0.495346 | 5.4:+14093034 | MS.gene59498:CDS |
| TTTGTATCGAGATAGACCTT+CGG | 0.498207 | 5.4:+14093585 | MS.gene59498:intron |
| GTGGTAATGGGAACGGCACC+AGG | 0.503169 | 5.4:-14093635 | None:intergenic |
| TATTGTGAATCTGGGTTTGT+GGG | 0.507703 | 5.4:+14092602 | MS.gene59498:CDS |
| AATGGAAGTATTGTGAATCT+GGG | 0.518446 | 5.4:+14092594 | MS.gene59498:CDS |
| CTGGGTTTGTGGGATACTGC+TGG | 0.538632 | 5.4:+14092612 | MS.gene59498:CDS |
| GTATTGTGAATCTGGGTTTG+TGG | 0.538694 | 5.4:+14092601 | MS.gene59498:CDS |
| CGTTCCCATTACCACAGCTC+AGG | 0.544810 | 5.4:+14093643 | MS.gene59498:CDS |
| TGAATGCAGTTCAAAATCAC+AGG | 0.553565 | 5.4:+14093794 | MS.gene59498:CDS |
| AAATGTGTTACTGTTGGTGA+TGG | 0.556572 | 5.4:+14091874 | MS.gene59498:CDS |
| ACTGTTGGTGATGGAGCTGT+TGG | 0.558196 | 5.4:+14091883 | MS.gene59498:CDS |
| TTTATTAAATGTGTTACTGT+TGG | 0.563795 | 5.4:+14091868 | MS.gene59498:CDS |
| CACCAGCAATACTTTCCCCA+CGG | 0.567542 | 5.4:+14091930 | MS.gene59498:CDS |
| GAACTGCATTCAATGTAAGC+TGG | 0.572826 | 5.4:-14093783 | None:intergenic |
| CAGTTCTGCATAGACCATCC+TGG | 0.577967 | 5.4:+14093617 | MS.gene59498:CDS |
| TATTTGTGGAACAGGGCAAG+AGG | 0.600984 | 5.4:+14092708 | MS.gene59498:intron |
| ACCAGAATTATGGGGACACC+AGG | 0.601533 | 5.4:-14093019 | None:intergenic |
| GTATTTATTGCAGAACGTGA+AGG | 0.606998 | 5.4:+14093898 | MS.gene59498:intron |
| GGTGTCCCCATAATTCTGGT+TGG | 0.615899 | 5.4:+14093022 | MS.gene59498:CDS |
| GAGTTGAAGCATTATGCACC+TGG | 0.616427 | 5.4:+14093001 | MS.gene59498:CDS |
| TCGGCACCACGGTAACTCAA+AGG | 0.619029 | 5.4:-14092748 | None:intergenic |
| TATTAAAGGGAGAAGAGCTG+AGG | 0.626553 | 5.4:+14093745 | MS.gene59498:intron |
| TTGTTCCAACCAGAATTATG+GGG | 0.627746 | 5.4:-14093027 | None:intergenic |
| CTGAGCTGTGGTAATGGGAA+CGG | 0.629176 | 5.4:-14093642 | None:intergenic |
| GAAAGCCAATATGAAAACAT+CGG | 0.632883 | 5.4:-14092767 | None:intergenic |
| TTAAGACCTTTGAGTTACCG+TGG | 0.650534 | 5.4:+14092742 | MS.gene59498:CDS |
| TGACAATTTCAGTGCGAATG+TGG | 0.655180 | 5.4:+14092566 | MS.gene59498:CDS |
| AGAACTGCTTATCATCCCGA+AGG | 0.656406 | 5.4:-14093601 | None:intergenic |
| TAATGGGAACGGCACCAGGA+TGG | 0.658560 | 5.4:-14093631 | None:intergenic |
| TTTATTGCAGAACGTGAAGG+CGG | 0.659717 | 5.4:+14093901 | MS.gene59498:intron |
| ATGCAGTTCAAAATCACAGG+AGG | 0.690232 | 5.4:+14093797 | MS.gene59498:CDS |
| ATATGAAAACATCGGCACCA+CGG | 0.709782 | 5.4:-14092759 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAATACCATATATAAATA+TGG | - | chr5.4:14093110-14093129 | None:intergenic | 10.0% |
| !! | TTAATACCATATATAAATAT+GGG | - | chr5.4:14093109-14093128 | None:intergenic | 10.0% |
| !!! | CAATTTCAAATTTTTATTTT+TGG | + | chr5.4:14091992-14092011 | MS.gene59498:intron | 10.0% |
| !!! | TTGTTATTTGATTTATATTT+TGG | + | chr5.4:14092642-14092661 | MS.gene59498:intron | 10.0% |
| !! | AAAATACATAAAAAAACACA+AGG | - | chr5.4:14092867-14092886 | None:intergenic | 15.0% |
| !! | AAATACATAAAAAAACACAA+GGG | - | chr5.4:14092866-14092885 | None:intergenic | 15.0% |
| !! | AAATTGAAGAAAAAAGAAAA+AGG | - | chr5.4:14091970-14091989 | None:intergenic | 15.0% |
| !! | AATTGAAGAAAAAAGAAAAA+GGG | - | chr5.4:14091969-14091988 | None:intergenic | 15.0% |
| !! | ATTTATATATGGTATTAATC+AGG | + | chr5.4:14093111-14093130 | MS.gene59498:intron | 15.0% |
| !! | GAAAATATTTAATACAAATC+TGG | - | chr5.4:14093448-14093467 | None:intergenic | 15.0% |
| !! | TAATACCATATATAAATATG+GGG | - | chr5.4:14093108-14093127 | None:intergenic | 15.0% |
| !! | TGTTAATTTAAAGATTGAAA+TGG | + | chr5.4:14092182-14092201 | MS.gene59498:intron | 15.0% |
| !! | TTTATATATGGTATTAATCA+GGG | + | chr5.4:14093112-14093131 | MS.gene59498:intron | 15.0% |
| !!! | GTTTGTTGAATTTAAAATTT+AGG | + | chr5.4:14092251-14092270 | MS.gene59498:intron | 15.0% |
| !!! | TGTAAATTTCAAATTTGTTA+TGG | + | chr5.4:14092297-14092316 | MS.gene59498:intron | 15.0% |
| !!! | TTATTTGATTTATATTTTGG+TGG | + | chr5.4:14092645-14092664 | MS.gene59498:intron | 15.0% |
| !!! | TTGTGTTTTTTTATGTATTT+TGG | + | chr5.4:14092866-14092885 | MS.gene59498:intron | 15.0% |
| !!! | TTTGGAATATATATGTAATT+GGG | + | chr5.4:14092224-14092243 | MS.gene59498:intron | 15.0% |
| !! | AATATTAAGTCGAAAAAAAC+TGG | - | chr5.4:14093545-14093564 | None:intergenic | 20.0% |
| !! | ATTAAATTAAATCTGACATG+TGG | + | chr5.4:14093718-14093737 | MS.gene59498:intron | 20.0% |
| !! | ATTGAAGAAAAAAGAAAAAG+GGG | - | chr5.4:14091968-14091987 | None:intergenic | 20.0% |
| !! | CAAATCATAATTTACATACT+CGG | - | chr5.4:14092147-14092166 | None:intergenic | 20.0% |
| !! | GATACAAATGACAAAATAAT+AGG | - | chr5.4:14093573-14093592 | None:intergenic | 20.0% |
| !! | TTAAATTAAATCTGACATGT+GGG | + | chr5.4:14093719-14093738 | MS.gene59498:intron | 20.0% |
| !!! | AAATTATGATTTGGAATGAT+GGG | + | chr5.4:14092154-14092173 | MS.gene59498:intron | 20.0% |
| !!! | AATTTTGATTTTTCAGTGTT+TGG | + | chr5.4:14092063-14092082 | MS.gene59498:intron | 20.0% |
| !!! | AATTTTTATTTTTGGGTATC+TGG | + | chr5.4:14092000-14092019 | MS.gene59498:intron | 20.0% |
| !!! | ATTCTTGTAAATTTGAAATC+TGG | + | chr5.4:14092097-14092116 | MS.gene59498:intron | 20.0% |
| !!! | ATTTTTATTTTTGGGTATCT+GGG | + | chr5.4:14092001-14092020 | MS.gene59498:intron | 20.0% |
| !!! | GTTTGATTTAAAAGTTGAAA+TGG | + | chr5.4:14092378-14092397 | MS.gene59498:intron | 20.0% |
| !!! | GTTTGGAATATATATGTAAT+TGG | + | chr5.4:14092223-14092242 | MS.gene59498:intron | 20.0% |
| !!! | TAAATTATGATTTGGAATGA+TGG | + | chr5.4:14092153-14092172 | MS.gene59498:intron | 20.0% |
| !!! | TTTATTAAATGTGTTACTGT+TGG | + | chr5.4:14091868-14091887 | MS.gene59498:CDS | 20.0% |
| ! | AAAACTAAAACAAACCAGAA+AGG | - | chr5.4:14093387-14093406 | None:intergenic | 25.0% |
| ! | AAAGAAGAATAAAGCACAAA+AGG | + | chr5.4:14093973-14093992 | MS.gene59498:CDS | 25.0% |
| ! | ATAGTTGATTATGAAATGCA+TGG | - | chr5.4:14093165-14093184 | None:intergenic | 25.0% |
| ! | ATATATAAATATGGGGAAGA+TGG | - | chr5.4:14093101-14093120 | None:intergenic | 25.0% |
| ! | ATCTTCCCCATATTTATATA+TGG | + | chr5.4:14093100-14093119 | MS.gene59498:intron | 25.0% |
| ! | ATTCTTCTACTAATTCACAA+TGG | + | chr5.4:14093843-14093862 | MS.gene59498:intron | 25.0% |
| ! | CGAGTATGTAAATTATGATT+TGG | + | chr5.4:14092145-14092164 | MS.gene59498:intron | 25.0% |
| ! | GATTGTTGGAATTAAAAGTT+GGG | + | chr5.4:14092436-14092455 | MS.gene59498:intron | 25.0% |
| ! | GGATTTATTGTGTTTATTTG+TGG | + | chr5.4:14092694-14092713 | MS.gene59498:intron | 25.0% |
| ! | TAGTTGATTATGAAATGCAT+GGG | - | chr5.4:14093164-14093183 | None:intergenic | 25.0% |
| ! | TGATTGTTGGAATTAAAAGT+TGG | + | chr5.4:14092435-14092454 | MS.gene59498:intron | 25.0% |
| ! | TTATGAAAATGTCTCCAAAA+AGG | + | chr5.4:14092810-14092829 | MS.gene59498:CDS | 25.0% |
| !! | AATGTGAAGTTTAAGTTTGT+TGG | + | chr5.4:14093873-14093892 | MS.gene59498:intron | 25.0% |
| !! | ATGGATATAATGTGAGATTT+TGG | + | chr5.4:14092397-14092416 | MS.gene59498:intron | 25.0% |
| !!! | ATATTGATTTGTGAATTTGC+TGG | + | chr5.4:14092479-14092498 | MS.gene59498:intron | 25.0% |
| !!! | ATTTTGTTGAACTTGCTTTT+TGG | + | chr5.4:14092513-14092532 | MS.gene59498:intron | 25.0% |
| !!! | ATTTTTTATTCTGCTACTCT+AGG | + | chr5.4:14093668-14093687 | MS.gene59498:intron | 25.0% |
| !!! | TATGTATTTTGGTTTATCTG+CGG | + | chr5.4:14092877-14092896 | MS.gene59498:intron | 25.0% |
| !!! | TTTTGGTGGATTTTGTTATT+CGG | + | chr5.4:14092659-14092678 | MS.gene59498:intron | 25.0% |
| AATTCAAAGTTGAAAAAGCC+AGG | - | chr5.4:14092040-14092059 | None:intergenic | 30.0% | |
| AGATACCAGTAGAAAAACAA+TGG | - | chr5.4:14093328-14093347 | None:intergenic | 30.0% | |
| AGATTGAAATGGATACAATG+TGG | + | chr5.4:14092193-14092212 | MS.gene59498:intron | 30.0% | |
| AGTTGATTATGAAATGCATG+GGG | - | chr5.4:14093163-14093182 | None:intergenic | 30.0% | |
| ATACATTGTATCTGCAATTG+GGG | + | chr5.4:14093411-14093430 | MS.gene59498:intron | 30.0% | |
| ATTGTGTTTATTTGTGGAAC+AGG | + | chr5.4:14092700-14092719 | MS.gene59498:intron | 30.0% | |
| CATACATTGTATCTGCAATT+GGG | + | chr5.4:14093410-14093429 | MS.gene59498:intron | 30.0% | |
| CTGAAATTGTCAAAAACTGT+CGG | - | chr5.4:14092558-14092577 | None:intergenic | 30.0% | |
| GAAAGCCAATATGAAAACAT+CGG | - | chr5.4:14092770-14092789 | None:intergenic | 30.0% | |
| GATTGAAATGGATACAATGT+GGG | + | chr5.4:14092194-14092213 | MS.gene59498:intron | 30.0% | |
| TCGAGTTTATGTTTGATTGT+TGG | + | chr5.4:14092422-14092441 | MS.gene59498:intron | 30.0% | |
| TTAATACAAATCTGGAGACA+GGG | - | chr5.4:14093440-14093459 | None:intergenic | 30.0% | |
| TTGTGTTTATTTGTGGAACA+GGG | + | chr5.4:14092701-14092720 | MS.gene59498:intron | 30.0% | |
| TTTAATACAAATCTGGAGAC+AGG | - | chr5.4:14093441-14093460 | None:intergenic | 30.0% | |
| TTTGTTCCAACCAGAATTAT+GGG | - | chr5.4:14093031-14093050 | None:intergenic | 30.0% | |
| ! | TGTAAATTTGAAATCTGGCA+TGG | + | chr5.4:14092102-14092121 | MS.gene59498:intron | 30.0% |
| ! | TTCTTCTTTTTCTTCTGCTT+TGG | - | chr5.4:14093962-14093981 | None:intergenic | 30.0% |
| ! | TTTGGAGACATTTTCATAAC+TGG | - | chr5.4:14092809-14092828 | None:intergenic | 30.0% |
| !! | AATGGAAGTATTGTGAATCT+GGG | + | chr5.4:14092594-14092613 | MS.gene59498:CDS | 30.0% |
| !! | GTTATGGAAAGTACTTTGTA+AGG | + | chr5.4:14092313-14092332 | MS.gene59498:intron | 30.0% |
| !! | TAATGGAAGTATTGTGAATC+TGG | + | chr5.4:14092593-14092612 | MS.gene59498:CDS | 30.0% |
| !!! | TTTGGTGGATTTTGTTATTC+GGG | + | chr5.4:14092660-14092679 | MS.gene59498:intron | 30.0% |
| AAAAAACTGGTACACTGATC+AGG | - | chr5.4:14093532-14093551 | None:intergenic | 35.0% | |
| AAGCTAACAAAACTACTCGA+TGG | - | chr5.4:14093481-14093500 | None:intergenic | 35.0% | |
| AAGTACTTTGTAAGGCAACT+GGG | + | chr5.4:14092321-14092340 | MS.gene59498:intron | 35.0% | |
| AGCTAACAAAACTACTCGAT+GGG | - | chr5.4:14093480-14093499 | None:intergenic | 35.0% | |
| ATAAAAAATCACCTGAGCTG+TGG | - | chr5.4:14093657-14093676 | None:intergenic | 35.0% | |
| CCAATTGCAGATACAATGTA+TGG | - | chr5.4:14093412-14093431 | None:intergenic | 35.0% | |
| CCATACATTGTATCTGCAAT+TGG | + | chr5.4:14093409-14093428 | MS.gene59498:intron | 35.0% | |
| CTTTGTTCCAACCAGAATTA+TGG | - | chr5.4:14093032-14093051 | None:intergenic | 35.0% | |
| GTATTTATTGCAGAACGTGA+AGG | + | chr5.4:14093898-14093917 | MS.gene59498:intron | 35.0% | |
| TATTGTGAATCTGGGTTTGT+GGG | + | chr5.4:14092602-14092621 | MS.gene59498:CDS | 35.0% | |
| TCTGCGGTGAACAATATATA+CGG | + | chr5.4:14092893-14092912 | MS.gene59498:intron | 35.0% | |
| TGAATGCAGTTCAAAATCAC+AGG | + | chr5.4:14093794-14093813 | MS.gene59498:CDS | 35.0% | |
| TTAGCTTCCAGTTAGACAAA+TGG | + | chr5.4:14093494-14093513 | MS.gene59498:intron | 35.0% | |
| TTGTTCCAACCAGAATTATG+GGG | - | chr5.4:14093030-14093049 | None:intergenic | 35.0% | |
| TTTGTATCGAGATAGACCTT+CGG | + | chr5.4:14093585-14093604 | MS.gene59498:intron | 35.0% | |
| ! | AAAGTACTTTGTAAGGCAAC+TGG | + | chr5.4:14092320-14092339 | MS.gene59498:intron | 35.0% |
| ! | AAATGTGTTACTGTTGGTGA+TGG | + | chr5.4:14091874-14091893 | MS.gene59498:CDS | 35.0% |
| ! | ATGGATACAATGTGGGATTT+TGG | + | chr5.4:14092201-14092220 | MS.gene59498:intron | 35.0% |
| ! | GGTATCTGATACATCAGTTT+TGG | + | chr5.4:14093341-14093360 | MS.gene59498:intron | 35.0% |
| ! | TCAAAATCACAGGAGGTATA+TGG | + | chr5.4:14093804-14093823 | MS.gene59498:intron | 35.0% |
| ! | TTCTTTTTCTTCTGCTTTGG+TGG | - | chr5.4:14093959-14093978 | None:intergenic | 35.0% |
| !! | CATCACCATTGTTTTTCTAC+TGG | + | chr5.4:14093320-14093339 | MS.gene59498:intron | 35.0% |
| !! | TATGATTTGGAATGATGGGT+TGG | + | chr5.4:14092158-14092177 | MS.gene59498:intron | 35.0% |
| !! | TTTTGATGTTTCTGCCTTTC+TGG | + | chr5.4:14093370-14093389 | MS.gene59498:intron | 35.0% |
| !!! | TACAATGTGGGATTTTGGTT+TGG | + | chr5.4:14092206-14092225 | MS.gene59498:intron | 35.0% |
| !!! | TGTTGAACTTGCTTTTTGGT+TGG | + | chr5.4:14092517-14092536 | MS.gene59498:intron | 35.0% |
| AGCACAACCATTTGTCTAAC+TGG | - | chr5.4:14093504-14093523 | None:intergenic | 40.0% | |
| AGTGCGAATGTGGTTGTTAA+TGG | + | chr5.4:14092576-14092595 | MS.gene59498:CDS | 40.0% | |
| ATATGAAAACATCGGCACCA+CGG | - | chr5.4:14092762-14092781 | None:intergenic | 40.0% | |
| ATGCAGTTCAAAATCACAGG+AGG | + | chr5.4:14093797-14093816 | MS.gene59498:CDS | 40.0% | |
| CCCTAGCAAACAAAAAGAAC+CGG | - | chr5.4:14093245-14093264 | None:intergenic | 40.0% | |
| CTGCGGTGAACAATATATAC+GGG | + | chr5.4:14092894-14092913 | MS.gene59498:intron | 40.0% | |
| CTGGGTTGTGTTTAAATTCC+TGG | + | chr5.4:14092019-14092038 | MS.gene59498:intron | 40.0% | |
| GAACTGCATTCAATGTAAGC+TGG | - | chr5.4:14093786-14093805 | None:intergenic | 40.0% | |
| GAAGTTTCCATTTGTCGAAC+TGG | + | chr5.4:14093207-14093226 | MS.gene59498:intron | 40.0% | |
| GACATGTGGGTCCTATTAAA+GGG | + | chr5.4:14093732-14093751 | MS.gene59498:intron | 40.0% | |
| GGCATGGAAAATGCTTTGTA+AGG | + | chr5.4:14092118-14092137 | MS.gene59498:intron | 40.0% | |
| GTATTGTGAATCTGGGTTTG+TGG | + | chr5.4:14092601-14092620 | MS.gene59498:CDS | 40.0% | |
| TATTAAAGGGAGAAGAGCTG+AGG | + | chr5.4:14093745-14093764 | MS.gene59498:intron | 40.0% | |
| TCAGCTCTTCTCCCTTTAAT+AGG | - | chr5.4:14093746-14093765 | None:intergenic | 40.0% | |
| TGACAATTTCAGTGCGAATG+TGG | + | chr5.4:14092566-14092585 | MS.gene59498:CDS | 40.0% | |
| TGACATGTGGGTCCTATTAA+AGG | + | chr5.4:14093731-14093750 | MS.gene59498:intron | 40.0% | |
| TGGTTGAAGGACAACTCTTA+TGG | - | chr5.4:14093939-14093958 | None:intergenic | 40.0% | |
| TTGTATCGAGATAGACCTTC+GGG | + | chr5.4:14093586-14093605 | MS.gene59498:intron | 40.0% | |
| TTTATTGCAGAACGTGAAGG+CGG | + | chr5.4:14093901-14093920 | MS.gene59498:intron | 40.0% | |
| ! | ATTCTGGTTGGAACAAAGCT+TGG | + | chr5.4:14093034-14093053 | MS.gene59498:CDS | 40.0% |
| ! | CGTGCTTGTTTCATTTTCAG+TGG | + | chr5.4:14092972-14092991 | MS.gene59498:intron | 40.0% |
| ! | TTAAGACCTTTGAGTTACCG+TGG | + | chr5.4:14092742-14092761 | MS.gene59498:CDS | 40.0% |
| ! | TTCTTGTTCCCGTTTTGCTT+TGG | + | chr5.4:14092837-14092856 | MS.gene59498:intron | 40.0% |
| !! | ACCGGTTCTTTTTGTTTGCT+AGG | + | chr5.4:14093241-14093260 | MS.gene59498:intron | 40.0% |
| !! | CCGGTTCTTTTTGTTTGCTA+GGG | + | chr5.4:14093242-14093261 | MS.gene59498:intron | 40.0% |
| !! | CGGTTCTTTTTGTTTGCTAG+GGG | + | chr5.4:14093243-14093262 | MS.gene59498:intron | 40.0% |
| !! | GGTTCTTTTTGTTTGCTAGG+GGG | + | chr5.4:14093244-14093263 | MS.gene59498:intron | 40.0% |
| !! | TTTTGTTTGCTAGGGGGAAA+GGG | + | chr5.4:14093250-14093269 | MS.gene59498:intron | 40.0% |
| !! | TTTTTGTTTGCTAGGGGGAA+AGG | + | chr5.4:14093249-14093268 | MS.gene59498:intron | 40.0% |
| !!! | CTTGCTTTTTGGTTGGAAAC+AGG | + | chr5.4:14092524-14092543 | MS.gene59498:intron | 40.0% |
| !!! | GGAACAAGAAAGCACCTTTT+TGG | - | chr5.4:14092827-14092846 | None:intergenic | 40.0% |
| !!! | TGGTGCCGATGTTTTCATAT+TGG | + | chr5.4:14092762-14092781 | MS.gene59498:CDS | 40.0% |
| AAGGGACACCAAAGCAAAAC+GGG | - | chr5.4:14092848-14092867 | None:intergenic | 45.0% | |
| AATCACCTGAGCTGTGGTAA+TGG | - | chr5.4:14093651-14093670 | None:intergenic | 45.0% | |
| AGAACTGCTTATCATCCCGA+AGG | - | chr5.4:14093604-14093623 | None:intergenic | 45.0% | |
| ATCACCTGAGCTGTGGTAAT+GGG | - | chr5.4:14093650-14093669 | None:intergenic | 45.0% | |
| CAAGGGACACCAAAGCAAAA+CGG | - | chr5.4:14092849-14092868 | None:intergenic | 45.0% | |
| CAGTTAGCCAGTTCGACAAA+TGG | - | chr5.4:14093217-14093236 | None:intergenic | 45.0% | |
| GGTGCATAATGCTTCAACTC+TGG | - | chr5.4:14093001-14093020 | None:intergenic | 45.0% | |
| GTTATTCGGGAGGTTCTTTC+TGG | + | chr5.4:14092673-14092692 | MS.gene59498:intron | 45.0% | |
| TATTTGTGGAACAGGGCAAG+AGG | + | chr5.4:14092708-14092727 | MS.gene59498:intron | 45.0% | |
| ! | GAGTTGAAGCATTATGCACC+TGG | + | chr5.4:14093001-14093020 | MS.gene59498:CDS | 45.0% |
| ! | TCTTCTGCTTTGGTGGTTGA+AGG | - | chr5.4:14093952-14093971 | None:intergenic | 45.0% |
| ! | TTTGTTTGCTAGGGGGAAAG+GGG | + | chr5.4:14093251-14093270 | MS.gene59498:intron | 45.0% |
| !!! | GGTGGATTTTGTTATTCGGG+AGG | + | chr5.4:14092663-14092682 | MS.gene59498:intron | 45.0% |
| !!! | AATTTCAAATTTTTATTTTT+GGG | + | chr5.4:14091993-14092012 | MS.gene59498:intron | 5.0% |
| ACCAGAATTATGGGGACACC+AGG | - | chr5.4:14093022-14093041 | None:intergenic | 50.0% | |
| ACCTGGTGTCCCCATAATTC+TGG | + | chr5.4:14093018-14093037 | MS.gene59498:CDS | 50.0% | |
| AGGGGAAGAATGACAAACCG+TGG | - | chr5.4:14091950-14091969 | None:intergenic | 50.0% | |
| CACCAGCAATACTTTCCCCA+CGG | + | chr5.4:14091930-14091949 | MS.gene59498:CDS | 50.0% | |
| CAGTTCTGCATAGACCATCC+TGG | + | chr5.4:14093617-14093636 | MS.gene59498:CDS | 50.0% | |
| GAACTGGCTAACTGCTGAAC+CGG | + | chr5.4:14093223-14093242 | MS.gene59498:intron | 50.0% | |
| GGGAAGAATGACAAACCGTG+GGG | - | chr5.4:14091948-14091967 | None:intergenic | 50.0% | |
| GGGGAAGAATGACAAACCGT+GGG | - | chr5.4:14091949-14091968 | None:intergenic | 50.0% | |
| GGTGTCCCCATAATTCTGGT+TGG | + | chr5.4:14093022-14093041 | MS.gene59498:CDS | 50.0% | |
| ! | TTGTTTGCTAGGGGGAAAGG+GGG | + | chr5.4:14093252-14093271 | MS.gene59498:intron | 50.0% |
| !! | AACCGTGGGGAAAGTATTGC+TGG | - | chr5.4:14091935-14091954 | None:intergenic | 50.0% |
| !! | ACTGTTGGTGATGGAGCTGT+TGG | + | chr5.4:14091883-14091902 | MS.gene59498:CDS | 50.0% |
| !! | CTGAGCTGTGGTAATGGGAA+CGG | - | chr5.4:14093645-14093664 | None:intergenic | 50.0% |
| CGTTCCCATTACCACAGCTC+AGG | + | chr5.4:14093643-14093662 | MS.gene59498:CDS | 55.0% | |
| CTGGGTTTGTGGGATACTGC+TGG | + | chr5.4:14092612-14092631 | MS.gene59498:CDS | 55.0% | |
| TAATGGGAACGGCACCAGGA+TGG | - | chr5.4:14093634-14093653 | None:intergenic | 55.0% | |
| TAGGGGGAAAGGGGGATTTC+TGG | + | chr5.4:14093260-14093279 | MS.gene59498:intron | 55.0% | |
| TCGGCACCACGGTAACTCAA+AGG | - | chr5.4:14092751-14092770 | None:intergenic | 55.0% | |
| !! | GTGGTAATGGGAACGGCACC+AGG | - | chr5.4:14093638-14093657 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 14091853 | 14094012 | 14091853 | ID=MS.gene59498 |
| chr5.4 | mRNA | 14091853 | 14094012 | 14091853 | ID=MS.gene59498.t1;Parent=MS.gene59498 |
| chr5.4 | exon | 14091853 | 14091951 | 14091853 | ID=MS.gene59498.t1.exon1;Parent=MS.gene59498.t1 |
| chr5.4 | CDS | 14091853 | 14091951 | 14091853 | ID=cds.MS.gene59498.t1;Parent=MS.gene59498.t1 |
| chr5.4 | exon | 14092546 | 14092633 | 14092546 | ID=MS.gene59498.t1.exon2;Parent=MS.gene59498.t1 |
| chr5.4 | CDS | 14092546 | 14092633 | 14092546 | ID=cds.MS.gene59498.t1;Parent=MS.gene59498.t1 |
| chr5.4 | exon | 14092722 | 14092831 | 14092722 | ID=MS.gene59498.t1.exon3;Parent=MS.gene59498.t1 |
| chr5.4 | CDS | 14092722 | 14092831 | 14092722 | ID=cds.MS.gene59498.t1;Parent=MS.gene59498.t1 |
| chr5.4 | exon | 14092992 | 14093055 | 14092992 | ID=MS.gene59498.t1.exon4;Parent=MS.gene59498.t1 |
| chr5.4 | CDS | 14092992 | 14093055 | 14092992 | ID=cds.MS.gene59498.t1;Parent=MS.gene59498.t1 |
| chr5.4 | exon | 14093600 | 14093664 | 14093600 | ID=MS.gene59498.t1.exon5;Parent=MS.gene59498.t1 |
| chr5.4 | CDS | 14093600 | 14093664 | 14093600 | ID=cds.MS.gene59498.t1;Parent=MS.gene59498.t1 |
| chr5.4 | exon | 14093753 | 14093818 | 14093753 | ID=MS.gene59498.t1.exon6;Parent=MS.gene59498.t1 |
| chr5.4 | CDS | 14093753 | 14093818 | 14093753 | ID=cds.MS.gene59498.t1;Parent=MS.gene59498.t1 |
| chr5.4 | exon | 14093911 | 14094012 | 14093911 | ID=MS.gene59498.t1.exon7;Parent=MS.gene59498.t1 |
| chr5.4 | CDS | 14093911 | 14094012 | 14093911 | ID=cds.MS.gene59498.t1;Parent=MS.gene59498.t1 |
| Gene Sequence |
| Protein sequence |
