Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017600.t1 | XP_024629125.1 | 98.9 | 715 | 6 | 1 | 1 | 715 | 1 | 713 | 0.00E+00 | 1157.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017600.t1 | Q9M1H3 | 75.8 | 724 | 165 | 3 | 1 | 715 | 1 | 723 | 1.4e-282 | 973.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017600.t1 | G7LB54 | 98.9 | 715 | 6 | 1 | 1 | 715 | 54 | 766 | 0.0e+00 | 1157.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene017600 | MS.gene054719 | PPI |
| MS.gene017600 | MS.gene028666 | PPI |
| MS.gene25771 | MS.gene017600 | PPI |
| MS.gene017600 | MS.gene98065 | PPI |
| MS.gene017600 | MS.gene40858 | PPI |
| MS.gene017600 | MS.gene69745 | PPI |
| MS.gene017600 | MS.gene31234 | PPI |
| MS.gene017600 | MS.gene70530 | PPI |
| MS.gene017600 | MS.gene044268 | PPI |
| MS.gene017600 | MS.gene050086 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017600.t1 | MTR_8g075040 | 99.021 | 715 | 5 | 1 | 1 | 715 | 54 | 766 | 0.0 | 1438 |
| MS.gene017600.t1 | MTR_7g018380 | 98.042 | 715 | 14 | 0 | 1 | 715 | 1 | 715 | 0.0 | 1429 |
| MS.gene017600.t1 | MTR_1g066620 | 91.444 | 561 | 46 | 2 | 156 | 715 | 2 | 561 | 0.0 | 1055 |
| MS.gene017600.t1 | MTR_3g080970 | 39.645 | 676 | 358 | 14 | 41 | 705 | 74 | 710 | 4.63e-155 | 466 |
| MS.gene017600.t1 | MTR_2g095440 | 41.155 | 554 | 293 | 6 | 152 | 705 | 62 | 582 | 1.10e-148 | 446 |
| MS.gene017600.t1 | MTR_2g095440 | 40.942 | 552 | 293 | 6 | 154 | 705 | 4 | 522 | 6.15e-148 | 442 |
| MS.gene017600.t1 | MTR_2g095440 | 41.091 | 550 | 291 | 6 | 156 | 705 | 12 | 528 | 7.64e-148 | 442 |
| MS.gene017600.t1 | MTR_4g057795 | 41.155 | 554 | 293 | 7 | 152 | 705 | 62 | 582 | 1.22e-145 | 438 |
| MS.gene017600.t1 | MTR_4g057795 | 40.873 | 504 | 265 | 7 | 202 | 705 | 2 | 472 | 4.43e-129 | 391 |
| MS.gene017600.t1 | MTR_3g095010 | 29.561 | 592 | 366 | 14 | 144 | 715 | 96 | 656 | 2.35e-62 | 221 |
| MS.gene017600.t1 | MTR_1g063170 | 30.332 | 211 | 112 | 7 | 482 | 666 | 393 | 594 | 1.43e-13 | 75.1 |
| MS.gene017600.t1 | MTR_7g102070 | 30.332 | 211 | 112 | 7 | 482 | 666 | 420 | 621 | 2.39e-13 | 74.3 |
| MS.gene017600.t1 | MTR_4g124050 | 31.313 | 198 | 82 | 7 | 493 | 655 | 1055 | 1233 | 2.72e-13 | 74.3 |
| MS.gene017600.t1 | MTR_3g107800 | 31.034 | 203 | 86 | 7 | 488 | 655 | 1026 | 1209 | 1.28e-12 | 72.0 |
| MS.gene017600.t1 | MTR_6g011680 | 31.441 | 229 | 118 | 10 | 488 | 691 | 1008 | 1222 | 2.09e-12 | 71.2 |
| MS.gene017600.t1 | MTR_5g029750 | 28.509 | 228 | 126 | 10 | 488 | 691 | 989 | 1203 | 4.16e-12 | 70.5 |
| MS.gene017600.t1 | MTR_8g022270 | 26.786 | 224 | 135 | 7 | 488 | 691 | 598 | 812 | 1.22e-11 | 68.9 |
| MS.gene017600.t1 | MTR_3g093430 | 30.213 | 235 | 113 | 9 | 488 | 691 | 364 | 578 | 1.22e-11 | 68.9 |
| MS.gene017600.t1 | MTR_8g107410 | 30.144 | 209 | 105 | 6 | 167 | 366 | 34 | 210 | 2.32e-11 | 65.1 |
| MS.gene017600.t1 | MTR_7g079540 | 36.646 | 161 | 78 | 6 | 505 | 643 | 101 | 259 | 2.68e-11 | 65.9 |
| MS.gene017600.t1 | MTR_7g079540 | 36.646 | 161 | 78 | 6 | 505 | 643 | 101 | 259 | 4.30e-11 | 65.5 |
| MS.gene017600.t1 | MTR_7g079540 | 26.210 | 248 | 126 | 8 | 166 | 386 | 98 | 315 | 6.05e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017600.t1 | AT3G54540 | 78.404 | 727 | 141 | 6 | 1 | 715 | 1 | 723 | 0.0 | 1136 |
| MS.gene017600.t1 | AT3G54540 | 78.404 | 727 | 141 | 6 | 1 | 715 | 1 | 723 | 0.0 | 1136 |
| MS.gene017600.t1 | AT1G64550 | 39.435 | 672 | 346 | 14 | 52 | 705 | 83 | 711 | 3.28e-156 | 469 |
| MS.gene017600.t1 | AT5G60790 | 41.802 | 555 | 288 | 8 | 152 | 705 | 67 | 587 | 1.86e-146 | 440 |
| MS.gene017600.t1 | AT5G64840 | 28.998 | 569 | 367 | 9 | 145 | 703 | 89 | 630 | 3.50e-65 | 229 |
| MS.gene017600.t1 | AT5G09930 | 30.366 | 573 | 356 | 14 | 144 | 703 | 74 | 616 | 3.79e-62 | 220 |
| MS.gene017600.t1 | AT1G67940 | 32.558 | 215 | 103 | 9 | 161 | 366 | 37 | 218 | 1.59e-13 | 72.0 |
| MS.gene017600.t1 | AT3G28345 | 30.556 | 216 | 124 | 7 | 481 | 673 | 988 | 1200 | 3.92e-13 | 73.9 |
| MS.gene017600.t1 | AT2G36910 | 30.097 | 206 | 109 | 7 | 487 | 666 | 367 | 563 | 4.95e-13 | 73.6 |
| MS.gene017600.t1 | AT3G28390 | 31.718 | 227 | 112 | 10 | 493 | 691 | 985 | 1196 | 7.04e-13 | 72.8 |
| MS.gene017600.t1 | AT3G28860 | 31.222 | 221 | 121 | 9 | 492 | 691 | 1014 | 1224 | 1.75e-11 | 68.6 |
| MS.gene017600.t1 | AT1G70610 | 31.792 | 173 | 104 | 4 | 488 | 646 | 455 | 627 | 2.17e-11 | 67.8 |
| MS.gene017600.t1 | AT1G70610 | 30.337 | 178 | 100 | 5 | 488 | 646 | 274 | 446 | 2.39e-11 | 67.4 |
| MS.gene017600.t1 | AT1G65410 | 27.723 | 202 | 104 | 5 | 166 | 354 | 97 | 269 | 3.15e-11 | 65.9 |
| MS.gene017600.t1 | AT4G25960 | 28.431 | 204 | 113 | 8 | 488 | 666 | 1030 | 1225 | 3.24e-11 | 67.4 |
| MS.gene017600.t1 | AT2G47000 | 28.958 | 259 | 118 | 10 | 488 | 710 | 1042 | 1270 | 4.81e-11 | 67.0 |
| MS.gene017600.t1 | AT2G47000 | 28.958 | 259 | 118 | 10 | 488 | 710 | 1042 | 1270 | 4.81e-11 | 67.0 |
| MS.gene017600.t1 | AT2G47000 | 28.958 | 259 | 118 | 10 | 488 | 710 | 1042 | 1270 | 4.81e-11 | 67.0 |
| MS.gene017600.t1 | AT3G28380 | 28.502 | 207 | 111 | 7 | 488 | 666 | 995 | 1192 | 6.54e-11 | 66.6 |
| MS.gene017600.t1 | AT1G10680 | 26.609 | 233 | 128 | 10 | 488 | 690 | 982 | 1201 | 8.94e-11 | 66.2 |
Find 168 sgRNAs with CRISPR-Local
Find 193 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTGCAAAACTTGGTAAATA+TGG | 0.195660 | 8.3:-28387403 | MS.gene017600:CDS |
| CAGTGTATGCAGAAGCTTTC+GGG | 0.221638 | 8.3:+28389006 | None:intergenic |
| GAAGCTTTCGGGGCAGGTTT+TGG | 0.249610 | 8.3:+28389017 | None:intergenic |
| ATGAAGAACGGAGTCAAATA+TGG | 0.285206 | 8.3:-28387147 | MS.gene017600:CDS |
| GATGCTTTCACTGTTGTAAT+TGG | 0.287671 | 8.3:-28388795 | MS.gene017600:CDS |
| AGGCAAAGAAGGAAGCTCTT+AGG | 0.295120 | 8.3:-28388827 | MS.gene017600:CDS |
| CTCTGCCATGTTGGCAGGTA+TGG | 0.307869 | 8.3:-28389087 | MS.gene017600:CDS |
| TGTTGATGTTGGCATTGATA+TGG | 0.325155 | 8.3:-28387656 | MS.gene017600:CDS |
| GGAAAACGTTATGGTTTGAT+TGG | 0.326176 | 8.3:-28388642 | MS.gene017600:CDS |
| AAAAGCTGATAAGCCTAAAA+AGG | 0.327285 | 8.3:-28389060 | MS.gene017600:CDS |
| ACTTGTGTGGTACCTCTACT+TGG | 0.330518 | 8.3:+28387797 | None:intergenic |
| TAAGAATATTGACGTCCTTC+TGG | 0.334816 | 8.3:-28388556 | MS.gene017600:CDS |
| AGCTGCCCATGTGGCTGAAC+AGG | 0.335346 | 8.3:-28388847 | MS.gene017600:CDS |
| GCCTAAAATCCTCTCGGTTT+GGG | 0.340199 | 8.3:+28387686 | None:intergenic |
| ACCTCAAGTGGCTTCAAATC+TGG | 0.342071 | 8.3:+28388918 | None:intergenic |
| TGCATATCCAGATGATTTGT+AGG | 0.356331 | 8.3:+28387265 | None:intergenic |
| TTGTAATCCTCAAATGTTCC+AGG | 0.358592 | 8.3:+28387094 | None:intergenic |
| ATCTTGTTGAGCCTTGTTCC+CGG | 0.359673 | 8.3:+28387906 | None:intergenic |
| GAATCTTCTAGCTGGTGATT+TGG | 0.379502 | 8.3:-28387581 | MS.gene017600:CDS |
| AGAAGGACGTCAATATTCTT+AGG | 0.383693 | 8.3:+28388558 | None:intergenic |
| ATATCTCATGGAAAACGTTA+TGG | 0.390477 | 8.3:-28388651 | MS.gene017600:CDS |
| TTGAAAGCAGCTAGAAGAAC+CGG | 0.393435 | 8.3:-28387925 | MS.gene017600:CDS |
| AGCCTAAAATCCTCTCGGTT+TGG | 0.396484 | 8.3:+28387685 | None:intergenic |
| TCAGTGTATGCAGAAGCTTT+CGG | 0.398636 | 8.3:+28389005 | None:intergenic |
| CACTGTTGTAATTGGAAGTC+GGG | 0.401671 | 8.3:-28388787 | MS.gene017600:CDS |
| GTTGCCATCGTTGGGCCTAA+TGG | 0.402218 | 8.3:-28387625 | MS.gene017600:CDS |
| GGTGTGAGTTCAGTGGGTTC+AGG | 0.404849 | 8.3:+28387745 | None:intergenic |
| TCTGTCTCTGCCATGTTGGC+AGG | 0.407416 | 8.3:-28389092 | MS.gene017600:CDS |
| GGGACTCGTGTTGCCATCGT+TGG | 0.415761 | 8.3:-28387634 | MS.gene017600:CDS |
| CTTCGAACTTCACCTTCACT+TGG | 0.420634 | 8.3:+28387556 | None:intergenic |
| TTACTAAGCCCCTCCTGGTC+TGG | 0.421538 | 8.3:+28387439 | None:intergenic |
| TCTTTGCCTGTTCAGCCACA+TGG | 0.423166 | 8.3:+28388841 | None:intergenic |
| TACTAATGAGGAAGAGGATG+TGG | 0.424275 | 8.3:-28388394 | MS.gene017600:CDS |
| GGCAAAGAAGGAAGCTCTTA+GGG | 0.426538 | 8.3:-28388826 | MS.gene017600:CDS |
| GAAAACGTTATGGTTTGATT+GGG | 0.428668 | 8.3:-28388641 | MS.gene017600:CDS |
| GATCTACAAAATATAGCTTC+TGG | 0.431690 | 8.3:-28388441 | MS.gene017600:CDS |
| CCTGGTTTAGCCTTTGAAGA+TGG | 0.434308 | 8.3:+28389146 | None:intergenic |
| GAGATATTCCCAACACTTTG+TGG | 0.436079 | 8.3:-28387512 | MS.gene017600:CDS |
| GAAGTCAGAAGTTGAGGATA+GGG | 0.442070 | 8.3:-28387534 | MS.gene017600:CDS |
| CCTCCTGATAGTTTGACAAT+GGG | 0.445696 | 8.3:+28387355 | None:intergenic |
| CACTAATCATCTTGACTTGA+GGG | 0.447004 | 8.3:-28388163 | MS.gene017600:CDS |
| TATGCAGAAGCTTTCGGGGC+AGG | 0.452904 | 8.3:+28389011 | None:intergenic |
| GTGTTTCATCCATTGTTAGT+AGG | 0.453766 | 8.3:+28387488 | None:intergenic |
| CTTGCTTACTAAGCCCCTCC+TGG | 0.460120 | 8.3:+28387434 | None:intergenic |
| AGATGAACCTACAAATCATC+TGG | 0.461197 | 8.3:-28387272 | MS.gene017600:CDS |
| AATATAGCTTCTGGTGAAGA+AGG | 0.461252 | 8.3:-28388432 | MS.gene017600:CDS |
| GTTGATGTTGGCATTGATAT+GGG | 0.466393 | 8.3:-28387655 | MS.gene017600:CDS |
| AAATTTCCCTGGAACATTTG+AGG | 0.468288 | 8.3:-28387101 | MS.gene017600:CDS |
| TTGATTGGGCCGAATGGAAT+GGG | 0.471197 | 8.3:-28388627 | MS.gene017600:CDS |
| GTGCAAAACTTGGTAAATAT+GGG | 0.472556 | 8.3:-28387402 | MS.gene017600:CDS |
| GTTGACTTGCCCATTCCATT+CGG | 0.473068 | 8.3:+28388618 | None:intergenic |
| CAAAATCCTTTAGTGGCGGC+TGG | 0.473137 | 8.3:-28388251 | MS.gene017600:CDS |
| CTGGTTGAGCAGGAGGTAGT+TGG | 0.476330 | 8.3:-28388537 | MS.gene017600:CDS |
| CATCCTCCAGCCGCCACTAA+AGG | 0.476753 | 8.3:+28388245 | None:intergenic |
| TAGTAGGTCCACAAAGTGTT+GGG | 0.476791 | 8.3:+28387504 | None:intergenic |
| TGACGTCCTTCTGGTTGAGC+AGG | 0.476988 | 8.3:-28388547 | MS.gene017600:CDS |
| AGGCTCTCAGATGTTGATGT+TGG | 0.477753 | 8.3:-28387667 | MS.gene017600:CDS |
| TATCAGGAGGGCAGAAAGCT+CGG | 0.480167 | 8.3:-28387342 | MS.gene017600:CDS |
| CAAATATGGGTTGTTGAAGA+TGG | 0.482826 | 8.3:-28387133 | MS.gene017600:CDS |
| TCACTGTTGTAATTGGAAGT+CGG | 0.487149 | 8.3:-28388788 | MS.gene017600:CDS |
| CCCTCCTGATAGTTTGACAA+TGG | 0.490991 | 8.3:+28387354 | None:intergenic |
| ATCAGGAGGGCAGAAAGCTC+GGG | 0.492201 | 8.3:-28387341 | MS.gene017600:CDS |
| GGACTCGTGTTGCCATCGTT+GGG | 0.492382 | 8.3:-28387633 | MS.gene017600:CDS |
| TGATGCATTGGCTGATGCGC+TGG | 0.493126 | 8.3:-28387236 | MS.gene017600:CDS |
| AGTCGGGCTTCAGTGCTTGA+TGG | 0.496702 | 8.3:-28388771 | MS.gene017600:CDS |
| CCTCAAGTCAAGATGATTAG+TGG | 0.497140 | 8.3:+28388164 | None:intergenic |
| AGATGATACTAATGAGGAAG+AGG | 0.497593 | 8.3:-28388400 | MS.gene017600:CDS |
| TGTGGCTGAACAGGCAAAGA+AGG | 0.499430 | 8.3:-28388838 | MS.gene017600:CDS |
| ATCGTTGGGCCTAATGGTGC+TGG | 0.501366 | 8.3:-28387619 | MS.gene017600:CDS |
| CGTCCTACAAAATCCTTTAG+TGG | 0.502520 | 8.3:-28388258 | MS.gene017600:CDS |
| TTGAAACTTCATTTCTATCG+TGG | 0.502609 | 8.3:-28388027 | MS.gene017600:CDS |
| TTCGAAGAAGTCAGAAGTTG+AGG | 0.502896 | 8.3:-28387540 | MS.gene017600:CDS |
| TAGCAAAGATGTTTCTAAGA+AGG | 0.504069 | 8.3:-28389123 | MS.gene017600:CDS |
| CAAAAGCAAGAGCAAGGGTA+AGG | 0.506561 | 8.3:-28387836 | MS.gene017600:CDS |
| GAGGCTGTTCGTGCAAAACT+TGG | 0.509140 | 8.3:-28387412 | MS.gene017600:CDS |
| AGAAGTCAGAAGTTGAGGAT+AGG | 0.509662 | 8.3:-28387535 | MS.gene017600:CDS |
| CTTTGCCTGTTCAGCCACAT+GGG | 0.510208 | 8.3:+28388842 | None:intergenic |
| TTAGTAGGTCCACAAAGTGT+TGG | 0.510313 | 8.3:+28387503 | None:intergenic |
| TTTGATTGGGCCGAATGGAA+TGG | 0.517459 | 8.3:-28388628 | MS.gene017600:CDS |
| TCTTGCTTGGAGGAAGATAC+CGG | 0.518263 | 8.3:-28388583 | MS.gene017600:CDS |
| TATGAACAATTACAACTGAT+GGG | 0.518809 | 8.3:-28388351 | MS.gene017600:CDS |
| GTATGAACAATTACAACTGA+TGG | 0.520659 | 8.3:-28388352 | MS.gene017600:CDS |
| GTTCAGTGGGTTCAGGAAAG+TGG | 0.522874 | 8.3:+28387752 | None:intergenic |
| CGTCCTTCTGGTTGAGCAGG+AGG | 0.524087 | 8.3:-28388544 | MS.gene017600:CDS |
| GATGCGCTGGATGAATTCAC+TGG | 0.525230 | 8.3:-28387223 | MS.gene017600:CDS |
| TAAGCCCCTCCTGGTCTGGA+TGG | 0.527473 | 8.3:+28387443 | None:intergenic |
| ACTAATGAGGAAGAGGATGT+GGG | 0.528986 | 8.3:-28388393 | MS.gene017600:CDS |
| AGCTAAGTTCGCAGCAGCTA+AGG | 0.533009 | 8.3:-28387869 | MS.gene017600:CDS |
| AGACGAAGAAGGTACTGAAC+AGG | 0.533085 | 8.3:+28387466 | None:intergenic |
| TTAGAAACATCTTTGCTACC+TGG | 0.537424 | 8.3:+28389128 | None:intergenic |
| AGCTTCTGGTGAAGAAGGCA+TGG | 0.539788 | 8.3:-28388427 | MS.gene017600:CDS |
| TGGAACATTTGAGGATTACA+AGG | 0.541220 | 8.3:-28387092 | MS.gene017600:CDS |
| TATGCAAAGTATTGATGCAT+TGG | 0.543005 | 8.3:-28387248 | MS.gene017600:CDS |
| GGCACTGTTAGAAATTTCCC+TGG | 0.544696 | 8.3:-28387112 | MS.gene017600:CDS |
| AGTGGAGGTGTGAGTTCAGT+GGG | 0.547635 | 8.3:+28387739 | None:intergenic |
| GAACAAGGCTCAACAAGATA+AGG | 0.549422 | 8.3:-28387902 | MS.gene017600:CDS |
| AGCTAGAAGAACCGGGAACA+AGG | 0.549535 | 8.3:-28387917 | MS.gene017600:CDS |
| TAGCTGCTGCGAACTTAGCT+CGG | 0.550469 | 8.3:+28387872 | None:intergenic |
| TGAAGAACGGAGTCAAATAT+GGG | 0.551908 | 8.3:-28387146 | MS.gene017600:CDS |
| ACTTCAGTGAAGATATCTCA+TGG | 0.554865 | 8.3:-28388663 | MS.gene017600:CDS |
| CGTCTCCATCCAGACCAGGA+GGG | 0.561023 | 8.3:-28387448 | MS.gene017600:CDS |
| TGAGTCTGAAGAGGAGCAAG+AGG | 0.562122 | 8.3:-28388952 | MS.gene017600:CDS |
| TATGGTTTGATTGGGCCGAA+TGG | 0.562765 | 8.3:-28388633 | MS.gene017600:CDS |
| GTCTCCATCCAGACCAGGAG+GGG | 0.564083 | 8.3:-28387447 | MS.gene017600:CDS |
| AATGAAGTTTCAAATCATGC+AGG | 0.564833 | 8.3:+28388037 | None:intergenic |
| ACGTCAATATTCTTAGGTAC+CGG | 0.565113 | 8.3:+28388564 | None:intergenic |
| TTCATCCATACCTGCCAACA+TGG | 0.566109 | 8.3:+28389082 | None:intergenic |
| CTTTGTGGACCTACTAACAA+TGG | 0.566897 | 8.3:-28387497 | MS.gene017600:CDS |
| TAGAAGAGTACTTGTGTCGT+TGG | 0.567745 | 8.3:-28388128 | MS.gene017600:CDS |
| TCTTCGTCTCCATCCAGACC+AGG | 0.570272 | 8.3:-28387452 | MS.gene017600:CDS |
| ACTTCAATAAGCTGCAGAAG+TGG | 0.570862 | 8.3:+28387721 | None:intergenic |
| CCACTAATCATCTTGACTTG+AGG | 0.575501 | 8.3:-28388164 | MS.gene017600:CDS |
| TTGACTTGAGGGCTGTTCTG+TGG | 0.576261 | 8.3:-28388152 | MS.gene017600:CDS |
| GGGGTAAGATGGTTATGACT+AGG | 0.577561 | 8.3:+28387376 | None:intergenic |
| GAAAAGCAAAAGCAAGAGCA+AGG | 0.587820 | 8.3:-28387842 | MS.gene017600:CDS |
| ACACTGCTGAATCTTCTAGC+TGG | 0.589769 | 8.3:-28387589 | MS.gene017600:CDS |
| GGATGCAGGTCCATCTTCAA+AGG | 0.590519 | 8.3:-28389156 | MS.gene017600:CDS |
| TTCAGACTCATCATCATCAG+AGG | 0.591473 | 8.3:+28388965 | None:intergenic |
| TGATGATGATGAGTCTGAAG+AGG | 0.592511 | 8.3:-28388961 | MS.gene017600:CDS |
| TAGAGGTACCACACAAGTGG+AGG | 0.593380 | 8.3:-28387792 | MS.gene017600:CDS |
| AAGTGGAGGTGTGAGTTCAG+TGG | 0.595199 | 8.3:+28387738 | None:intergenic |
| GCCAGATTTGAAGCCACTTG+AGG | 0.595553 | 8.3:-28388919 | MS.gene017600:CDS |
| CTTGTGTGGTACCTCTACTT+GGG | 0.597963 | 8.3:+28387798 | None:intergenic |
| CCATCTTCAAAGGCTAAACC+AGG | 0.598127 | 8.3:-28389146 | MS.gene017600:CDS |
| CTCAAGTCAAGATGATTAGT+GGG | 0.599587 | 8.3:+28388165 | None:intergenic |
| GGATAAAGATGATACTAATG+AGG | 0.600793 | 8.3:-28388406 | MS.gene017600:CDS |
| CTGAGAGCCTAAAATCCTCT+CGG | 0.603865 | 8.3:+28387680 | None:intergenic |
| TTGATGTTGGCATTGATATG+GGG | 0.604870 | 8.3:-28387654 | MS.gene017600:CDS |
| GTGTCGTTGGAAGAAAACTT+TGG | 0.605012 | 8.3:-28388115 | MS.gene017600:CDS |
| CTGTAGTCCCTCCACTTGTG+TGG | 0.605482 | 8.3:+28387784 | None:intergenic |
| AAGTAGAGGTACCACACAAG+TGG | 0.606298 | 8.3:-28387795 | MS.gene017600:CDS |
| TCATCGAGCAATAATAGAGT+GGG | 0.608704 | 8.3:+28388189 | None:intergenic |
| TCGTTGGAAGAAAACTTTGG+TGG | 0.608839 | 8.3:-28388112 | MS.gene017600:CDS |
| TCAATAAGCTGCAGAAGTGG+AGG | 0.610264 | 8.3:+28387724 | None:intergenic |
| GGTGATTTGGTTCCAAGTGA+AGG | 0.610276 | 8.3:-28387568 | MS.gene017600:CDS |
| GAGCAAGGGTAAGGTTGATG+AGG | 0.613167 | 8.3:-28387827 | MS.gene017600:CDS |
| AGGAGCAAGAGGAAAAGCAT+AGG | 0.613429 | 8.3:-28388941 | MS.gene017600:CDS |
| TCAGACTCATCATCATCAGA+GGG | 0.613503 | 8.3:+28388966 | None:intergenic |
| TGTAATCCTCAAATGTTCCA+GGG | 0.613886 | 8.3:+28387095 | None:intergenic |
| TTCATCGAGCAATAATAGAG+TGG | 0.615022 | 8.3:+28388188 | None:intergenic |
| GGAGGGGCTTAGTAAGCAAG+AGG | 0.616783 | 8.3:-28387431 | MS.gene017600:CDS |
| CCCATTGTCAAACTATCAGG+AGG | 0.619312 | 8.3:-28387355 | MS.gene017600:CDS |
| TCAGCAATAGACACCTCAAG+TGG | 0.621486 | 8.3:+28388906 | None:intergenic |
| CTCCTGATAGTTTGACAATG+GGG | 0.626825 | 8.3:+28387356 | None:intergenic |
| CTACCTCCTGCTCAACCAGA+AGG | 0.630434 | 8.3:+28388541 | None:intergenic |
| AATCCTTTAGTGGCGGCTGG+AGG | 0.632477 | 8.3:-28388248 | MS.gene017600:CDS |
| TGAAAGCAGCTAGAAGAACC+GGG | 0.637063 | 8.3:-28387924 | MS.gene017600:CDS |
| GGTCTGGATGGAGACGAAGA+AGG | 0.643717 | 8.3:+28387455 | None:intergenic |
| GGCTCAACAAGATAAGGTGA+AGG | 0.644665 | 8.3:-28387896 | MS.gene017600:CDS |
| TCGTCTCCATCCAGACCAGG+AGG | 0.645629 | 8.3:-28387449 | MS.gene017600:CDS |
| TAAAATGTGAGGTCTTGACA+TGG | 0.645742 | 8.3:+28387300 | None:intergenic |
| TCATCTAACAATAAAATGTG+AGG | 0.647891 | 8.3:+28387289 | None:intergenic |
| TCCTGATAGTTTGACAATGG+GGG | 0.650226 | 8.3:+28387357 | None:intergenic |
| TGAGGATGAGACCCAAGTAG+AGG | 0.652669 | 8.3:-28387809 | MS.gene017600:CDS |
| AGAGGTACCACACAAGTGGA+GGG | 0.653345 | 8.3:-28387791 | MS.gene017600:CDS |
| GACTCATCATCATCAGAGGG+AGG | 0.655723 | 8.3:+28388969 | None:intergenic |
| AGGAGGGCAGAAAGCTCGGG+TGG | 0.658600 | 8.3:-28387338 | MS.gene017600:CDS |
| CCTACAAAATCCTTTAGTGG+CGG | 0.660892 | 8.3:-28388255 | MS.gene017600:CDS |
| AAAAGCAAAAGCAAGAGCAA+GGG | 0.661346 | 8.3:-28387841 | MS.gene017600:CDS |
| ATGAACAATTACAACTGATG+GGG | 0.661536 | 8.3:-28388350 | MS.gene017600:CDS |
| AGCACCATTAGGCCCAACGA+TGG | 0.661552 | 8.3:+28387621 | None:intergenic |
| AGTGTATGCAGAAGCTTTCG+GGG | 0.663149 | 8.3:+28389007 | None:intergenic |
| GCGCTGGATGAATTCACTGG+TGG | 0.669802 | 8.3:-28387220 | MS.gene017600:CDS |
| CCATTGTCAAACTATCAGGA+GGG | 0.684004 | 8.3:-28387354 | MS.gene017600:CDS |
| GTGTCTGTGATGATGAAGAA+CGG | 0.698431 | 8.3:-28387159 | MS.gene017600:CDS |
| CAAGTGGAGGGACTACAGCG+TGG | 0.701926 | 8.3:-28387779 | MS.gene017600:CDS |
| TCAGTGCTTGATGGAGACGA+TGG | 0.702484 | 8.3:-28388762 | MS.gene017600:CDS |
| CTTCAGTTACCCAAACCGAG+AGG | 0.710739 | 8.3:-28387695 | MS.gene017600:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TATGAACAATTACAACTGAT+GGG | - | chr8.3:28387876-28387895 | MS.gene017600:CDS | 25.0% |
| ! | TCATCTAACAATAAAATGTG+AGG | + | chr8.3:28388941-28388960 | None:intergenic | 25.0% |
| !! | AACGATAGAAAATTTTTCTG+TGG | - | chr8.3:28387512-28387531 | MS.gene017600:CDS | 25.0% |
| AAAAGCTGATAAGCCTAAAA+AGG | - | chr8.3:28387167-28387186 | MS.gene017600:CDS | 30.0% | |
| AATGAAGTTTCAAATCATGC+AGG | + | chr8.3:28388193-28388212 | None:intergenic | 30.0% | |
| ATATCTCATGGAAAACGTTA+TGG | - | chr8.3:28387576-28387595 | MS.gene017600:CDS | 30.0% | |
| ATGAACAATTACAACTGATG+GGG | - | chr8.3:28387877-28387896 | MS.gene017600:CDS | 30.0% | |
| GAAAACGTTATGGTTTGATT+GGG | - | chr8.3:28387586-28387605 | MS.gene017600:CDS | 30.0% | |
| GATCTACAAAATATAGCTTC+TGG | - | chr8.3:28387786-28387805 | MS.gene017600:CDS | 30.0% | |
| GGATAAAGATGATACTAATG+AGG | - | chr8.3:28387821-28387840 | MS.gene017600:CDS | 30.0% | |
| GTATGAACAATTACAACTGA+TGG | - | chr8.3:28387875-28387894 | MS.gene017600:CDS | 30.0% | |
| GTGCAAAACTTGGTAAATAT+GGG | - | chr8.3:28388825-28388844 | MS.gene017600:CDS | 30.0% | |
| TTGAAACTTCATTTCTATCG+TGG | - | chr8.3:28388200-28388219 | MS.gene017600:CDS | 30.0% | |
| ! | TAGCAAAGATGTTTCTAAGA+AGG | - | chr8.3:28387104-28387123 | MS.gene017600:CDS | 30.0% |
| ! | TTATTCGAAGATGCCTTTTT+AGG | + | chr8.3:28387183-28387202 | None:intergenic | 30.0% |
| !! | AATTTTGATGCTTTTGAGAG+TGG | - | chr8.3:28388224-28388243 | MS.gene017600:CDS | 30.0% |
| !! | ATTTTGATGCTTTTGAGAGT+GGG | - | chr8.3:28388225-28388244 | MS.gene017600:CDS | 30.0% |
| !! | TAAAAAGGCATCTTCGAATA+AGG | - | chr8.3:28387182-28387201 | MS.gene017600:CDS | 30.0% |
| !! | TATGCAAAGTATTGATGCAT+TGG | - | chr8.3:28388979-28388998 | MS.gene017600:CDS | 30.0% |
| AAAAGCAAAAGCAAGAGCAA+GGG | - | chr8.3:28388386-28388405 | MS.gene017600:CDS | 35.0% | |
| AAATTTCCCTGGAACATTTG+AGG | - | chr8.3:28389126-28389145 | MS.gene017600:CDS | 35.0% | |
| AATATAGCTTCTGGTGAAGA+AGG | - | chr8.3:28387795-28387814 | MS.gene017600:CDS | 35.0% | |
| ACGTCAATATTCTTAGGTAC+CGG | + | chr8.3:28387666-28387685 | None:intergenic | 35.0% | |
| ACTTCAGTGAAGATATCTCA+TGG | - | chr8.3:28387564-28387583 | MS.gene017600:CDS | 35.0% | |
| AGAAGGACGTCAATATTCTT+AGG | + | chr8.3:28387672-28387691 | None:intergenic | 35.0% | |
| AGATGAACCTACAAATCATC+TGG | - | chr8.3:28388955-28388974 | MS.gene017600:CDS | 35.0% | |
| AGATGATACTAATGAGGAAG+AGG | - | chr8.3:28387827-28387846 | MS.gene017600:CDS | 35.0% | |
| ATGAAGAACGGAGTCAAATA+TGG | - | chr8.3:28389080-28389099 | MS.gene017600:CDS | 35.0% | |
| CGTGCAAAACTTGGTAAATA+TGG | - | chr8.3:28388824-28388843 | MS.gene017600:CDS | 35.0% | |
| CTCAAGTCAAGATGATTAGT+GGG | + | chr8.3:28388065-28388084 | None:intergenic | 35.0% | |
| GATGCTTTCACTGTTGTAAT+TGG | - | chr8.3:28387432-28387451 | MS.gene017600:CDS | 35.0% | |
| GGAAAACGTTATGGTTTGAT+TGG | - | chr8.3:28387585-28387604 | MS.gene017600:CDS | 35.0% | |
| GTGTTTCATCCATTGTTAGT+AGG | + | chr8.3:28388742-28388761 | None:intergenic | 35.0% | |
| TAAAATGTGAGGTCTTGACA+TGG | + | chr8.3:28388930-28388949 | None:intergenic | 35.0% | |
| TAAGAATATTGACGTCCTTC+TGG | - | chr8.3:28387671-28387690 | MS.gene017600:CDS | 35.0% | |
| TCACTGTTGTAATTGGAAGT+CGG | - | chr8.3:28387439-28387458 | MS.gene017600:CDS | 35.0% | |
| TCATCGAGCAATAATAGAGT+GGG | + | chr8.3:28388041-28388060 | None:intergenic | 35.0% | |
| TGAAGAACGGAGTCAAATAT+GGG | - | chr8.3:28389081-28389100 | MS.gene017600:CDS | 35.0% | |
| TGGAACATTTGAGGATTACA+AGG | - | chr8.3:28389135-28389154 | MS.gene017600:CDS | 35.0% | |
| TGTAATCCTCAAATGTTCCA+GGG | + | chr8.3:28389135-28389154 | None:intergenic | 35.0% | |
| TTAGAAACATCTTTGCTACC+TGG | + | chr8.3:28387102-28387121 | None:intergenic | 35.0% | |
| TTCATCGAGCAATAATAGAG+TGG | + | chr8.3:28388042-28388061 | None:intergenic | 35.0% | |
| TTGTAATCCTCAAATGTTCC+AGG | + | chr8.3:28389136-28389155 | None:intergenic | 35.0% | |
| ! | AAAATTTTTCTGTGGCTGCT+CGG | - | chr8.3:28387520-28387539 | MS.gene017600:CDS | 35.0% |
| ! | CAAATATGGGTTGTTGAAGA+TGG | - | chr8.3:28389094-28389113 | MS.gene017600:CDS | 35.0% |
| ! | CACTAAAGGATTTTGTAGGA+CGG | + | chr8.3:28387971-28387990 | None:intergenic | 35.0% |
| ! | CACTAATCATCTTGACTTGA+GGG | - | chr8.3:28388064-28388083 | MS.gene017600:CDS | 35.0% |
| ! | TGCATATCCAGATGATTTGT+AGG | + | chr8.3:28388965-28388984 | None:intergenic | 35.0% |
| !! | GTTGATGTTGGCATTGATAT+GGG | - | chr8.3:28388572-28388591 | MS.gene017600:CDS | 35.0% |
| !! | TGTTGATGTTGGCATTGATA+TGG | - | chr8.3:28388571-28388590 | MS.gene017600:CDS | 35.0% |
| !! | TTGATGTTGGCATTGATATG+GGG | - | chr8.3:28388573-28388592 | MS.gene017600:CDS | 35.0% |
| !!! | TCAAAGATTTTAGCTGGTCT+GGG | - | chr8.3:28387924-28387943 | MS.gene017600:CDS | 35.0% |
| AAGAAAAAGTCAGAGGATGC+AGG | - | chr8.3:28387057-28387076 | MS.gene017600:CDS | 40.0% | |
| ACTAATGAGGAAGAGGATGT+GGG | - | chr8.3:28387834-28387853 | MS.gene017600:CDS | 40.0% | |
| ACTTCAATAAGCTGCAGAAG+TGG | + | chr8.3:28388509-28388528 | None:intergenic | 40.0% | |
| AGAAGTCAGAAGTTGAGGAT+AGG | - | chr8.3:28388692-28388711 | MS.gene017600:CDS | 40.0% | |
| CACTGTTGTAATTGGAAGTC+GGG | - | chr8.3:28387440-28387459 | MS.gene017600:CDS | 40.0% | |
| CCATTGTCAAACTATCAGGA+GGG | - | chr8.3:28388873-28388892 | MS.gene017600:CDS | 40.0% | |
| CCTACAAAATCCTTTAGTGG+CGG | - | chr8.3:28387972-28387991 | MS.gene017600:CDS | 40.0% | |
| CCTCAAGTCAAGATGATTAG+TGG | + | chr8.3:28388066-28388085 | None:intergenic | 40.0% | |
| CCTCCTGATAGTTTGACAAT+GGG | + | chr8.3:28388875-28388894 | None:intergenic | 40.0% | |
| CGTCCTACAAAATCCTTTAG+TGG | - | chr8.3:28387969-28387988 | MS.gene017600:CDS | 40.0% | |
| CTCCTGATAGTTTGACAATG+GGG | + | chr8.3:28388874-28388893 | None:intergenic | 40.0% | |
| CTTTGTGGACCTACTAACAA+TGG | - | chr8.3:28388730-28388749 | MS.gene017600:CDS | 40.0% | |
| GAAAAGCAAAAGCAAGAGCA+AGG | - | chr8.3:28388385-28388404 | MS.gene017600:CDS | 40.0% | |
| GAACAAGGCTCAACAAGATA+AGG | - | chr8.3:28388325-28388344 | MS.gene017600:CDS | 40.0% | |
| GAAGTCAGAAGTTGAGGATA+GGG | - | chr8.3:28388693-28388712 | MS.gene017600:CDS | 40.0% | |
| GAGATATTCCCAACACTTTG+TGG | - | chr8.3:28388715-28388734 | MS.gene017600:CDS | 40.0% | |
| TACTAATGAGGAAGAGGATG+TGG | - | chr8.3:28387833-28387852 | MS.gene017600:CDS | 40.0% | |
| TCAGACTCATCATCATCAGA+GGG | + | chr8.3:28387264-28387283 | None:intergenic | 40.0% | |
| TCAGTGTATGCAGAAGCTTT+CGG | + | chr8.3:28387225-28387244 | None:intergenic | 40.0% | |
| TCCTGATAGTTTGACAATGG+GGG | + | chr8.3:28388873-28388892 | None:intergenic | 40.0% | |
| TCGTTGGAAGAAAACTTTGG+TGG | - | chr8.3:28388115-28388134 | MS.gene017600:CDS | 40.0% | |
| TTAGTAGGTCCACAAAGTGT+TGG | + | chr8.3:28388727-28388746 | None:intergenic | 40.0% | |
| TTCAGACTCATCATCATCAG+AGG | + | chr8.3:28387265-28387284 | None:intergenic | 40.0% | |
| TTCGAAGAAGTCAGAAGTTG+AGG | - | chr8.3:28388687-28388706 | MS.gene017600:CDS | 40.0% | |
| TTGAAAGCAGCTAGAAGAAC+CGG | - | chr8.3:28388302-28388321 | MS.gene017600:CDS | 40.0% | |
| ! | AAATTTTTCTGTGGCTGCTC+GGG | - | chr8.3:28387521-28387540 | MS.gene017600:CDS | 40.0% |
| ! | ATTTTCTGTCTCTGCCATGT+TGG | - | chr8.3:28387131-28387150 | MS.gene017600:CDS | 40.0% |
| ! | CCACTAATCATCTTGACTTG+AGG | - | chr8.3:28388063-28388082 | MS.gene017600:CDS | 40.0% |
| ! | GAATCTTCTAGCTGGTGATT+TGG | - | chr8.3:28388646-28388665 | MS.gene017600:CDS | 40.0% |
| ! | GGTTTTACAAAGGACATGCA+GGG | - | chr8.3:28387945-28387964 | MS.gene017600:CDS | 40.0% |
| ! | GTAGATTTTCCAGCACCATT+AGG | + | chr8.3:28388620-28388639 | None:intergenic | 40.0% |
| ! | GTGTCGTTGGAAGAAAACTT+TGG | - | chr8.3:28388112-28388131 | MS.gene017600:CDS | 40.0% |
| ! | GTGTCTGTGATGATGAAGAA+CGG | - | chr8.3:28389068-28389087 | MS.gene017600:CDS | 40.0% |
| ! | TAGTAGGTCCACAAAGTGTT+GGG | + | chr8.3:28388726-28388745 | None:intergenic | 40.0% |
| ! | TGATGATGATGAGTCTGAAG+AGG | - | chr8.3:28387266-28387285 | MS.gene017600:CDS | 40.0% |
| !! | CAAGCGTCAAAGATTTTAGC+TGG | - | chr8.3:28387918-28387937 | MS.gene017600:CDS | 40.0% |
| !! | TAGAAGAGTACTTGTGTCGT+TGG | - | chr8.3:28388099-28388118 | MS.gene017600:CDS | 40.0% |
| !!! | AGATATTTTAGCTGCCCATG+TGG | - | chr8.3:28387371-28387390 | MS.gene017600:CDS | 40.0% |
| !!! | CACTTTTGAAGCTTCTTGCT+TGG | - | chr8.3:28387631-28387650 | MS.gene017600:CDS | 40.0% |
| !!! | GTCAAAGATTTTAGCTGGTC+TGG | - | chr8.3:28387923-28387942 | MS.gene017600:CDS | 40.0% |
| !!! | TTTTGAAGCTTCTTGCTTGG+AGG | - | chr8.3:28387634-28387653 | MS.gene017600:CDS | 40.0% |
| ACACTGCTGAATCTTCTAGC+TGG | - | chr8.3:28388638-28388657 | MS.gene017600:CDS | 45.0% | |
| ACCCCCATTGTCAAACTATC+AGG | - | chr8.3:28388869-28388888 | MS.gene017600:CDS | 45.0% | |
| ACCTCAAGTGGCTTCAAATC+TGG | + | chr8.3:28387312-28387331 | None:intergenic | 45.0% | |
| ACTTGTGTGGTACCTCTACT+TGG | + | chr8.3:28388433-28388452 | None:intergenic | 45.0% | |
| AGCCTAAAATCCTCTCGGTT+TGG | + | chr8.3:28388545-28388564 | None:intergenic | 45.0% | |
| AGGCAAAGAAGGAAGCTCTT+AGG | - | chr8.3:28387400-28387419 | MS.gene017600:CDS | 45.0% | |
| AGGCTCTCAGATGTTGATGT+TGG | - | chr8.3:28388560-28388579 | MS.gene017600:CDS | 45.0% | |
| AGTGTATGCAGAAGCTTTCG+GGG | + | chr8.3:28387223-28387242 | None:intergenic | 45.0% | |
| CAAAAGCAAGAGCAAGGGTA+AGG | - | chr8.3:28388391-28388410 | MS.gene017600:CDS | 45.0% | |
| CAGTGTATGCAGAAGCTTTC+GGG | + | chr8.3:28387224-28387243 | None:intergenic | 45.0% | |
| CCATCTTCAAAGGCTAAACC+AGG | - | chr8.3:28387081-28387100 | MS.gene017600:CDS | 45.0% | |
| CCCATTGTCAAACTATCAGG+AGG | - | chr8.3:28388872-28388891 | MS.gene017600:CDS | 45.0% | |
| CCCTCCTGATAGTTTGACAA+TGG | + | chr8.3:28388876-28388895 | None:intergenic | 45.0% | |
| CTGAGAGCCTAAAATCCTCT+CGG | + | chr8.3:28388550-28388569 | None:intergenic | 45.0% | |
| CTTCGAACTTCACCTTCACT+TGG | + | chr8.3:28388674-28388693 | None:intergenic | 45.0% | |
| CTTGTGTGGTACCTCTACTT+GGG | + | chr8.3:28388432-28388451 | None:intergenic | 45.0% | |
| GCCTAAAATCCTCTCGGTTT+GGG | + | chr8.3:28388544-28388563 | None:intergenic | 45.0% | |
| GGCAAAGAAGGAAGCTCTTA+GGG | - | chr8.3:28387401-28387420 | MS.gene017600:CDS | 45.0% | |
| GGCACTGTTAGAAATTTCCC+TGG | - | chr8.3:28389115-28389134 | MS.gene017600:CDS | 45.0% | |
| GGCTCAACAAGATAAGGTGA+AGG | - | chr8.3:28388331-28388350 | MS.gene017600:CDS | 45.0% | |
| GGGGTAAGATGGTTATGACT+AGG | + | chr8.3:28388854-28388873 | None:intergenic | 45.0% | |
| GTTTGACAATGGGGGTAAGA+TGG | + | chr8.3:28388865-28388884 | None:intergenic | 45.0% | |
| TATGGTTTGATTGGGCCGAA+TGG | - | chr8.3:28387594-28387613 | MS.gene017600:CDS | 45.0% | |
| TCAATAAGCTGCAGAAGTGG+AGG | + | chr8.3:28388506-28388525 | None:intergenic | 45.0% | |
| TCAGCAATAGACACCTCAAG+TGG | + | chr8.3:28387324-28387343 | None:intergenic | 45.0% | |
| TCTTGCTTGGAGGAAGATAC+CGG | - | chr8.3:28387644-28387663 | MS.gene017600:CDS | 45.0% | |
| TGAAAGCAGCTAGAAGAACC+GGG | - | chr8.3:28388303-28388322 | MS.gene017600:CDS | 45.0% | |
| TTCATCCATACCTGCCAACA+TGG | + | chr8.3:28387148-28387167 | None:intergenic | 45.0% | |
| TTGATTGGGCCGAATGGAAT+GGG | - | chr8.3:28387600-28387619 | MS.gene017600:CDS | 45.0% | |
| TTTGATTGGGCCGAATGGAA+TGG | - | chr8.3:28387599-28387618 | MS.gene017600:CDS | 45.0% | |
| ! | AATTTTTCTGTGGCTGCTCG+GGG | - | chr8.3:28387522-28387541 | MS.gene017600:CDS | 45.0% |
| ! | ACCCAAACCGAGAGGATTTT+AGG | - | chr8.3:28388540-28388559 | MS.gene017600:CDS | 45.0% |
| ! | AGGAGCAAGAGGAAAAGCAT+AGG | - | chr8.3:28387286-28387305 | MS.gene017600:CDS | 45.0% |
| ! | CCGCCACTAAAGGATTTTGT+AGG | + | chr8.3:28387975-28387994 | None:intergenic | 45.0% |
| ! | CCTGGTTTAGCCTTTGAAGA+TGG | + | chr8.3:28387084-28387103 | None:intergenic | 45.0% |
| ! | GGGTTTTACAAAGGACATGC+AGG | - | chr8.3:28387944-28387963 | MS.gene017600:CDS | 45.0% |
| !! | AAGTAGAGGTACCACACAAG+TGG | - | chr8.3:28388432-28388451 | MS.gene017600:CDS | 45.0% |
| !! | AGACGAAGAAGGTACTGAAC+AGG | + | chr8.3:28388764-28388783 | None:intergenic | 45.0% |
| !! | AGCTGGTCTGGGTTTTACAA+AGG | - | chr8.3:28387935-28387954 | MS.gene017600:CDS | 45.0% |
| !! | ATCTTGTTGAGCCTTGTTCC+CGG | + | chr8.3:28388324-28388343 | None:intergenic | 45.0% |
| !! | GGTGATTTGGTTCCAAGTGA+AGG | - | chr8.3:28388659-28388678 | MS.gene017600:CDS | 45.0% |
| !! | GTTGACTTGCCCATTCCATT+CGG | + | chr8.3:28387612-28387631 | None:intergenic | 45.0% |
| AGCTAAGTTCGCAGCAGCTA+AGG | - | chr8.3:28388358-28388377 | MS.gene017600:CDS | 50.0% | |
| AGCTAGAAGAACCGGGAACA+AGG | - | chr8.3:28388310-28388329 | MS.gene017600:CDS | 50.0% | |
| AGCTTCTGGTGAAGAAGGCA+TGG | - | chr8.3:28387800-28387819 | MS.gene017600:CDS | 50.0% | |
| CAAAATCCTTTAGTGGCGGC+TGG | - | chr8.3:28387976-28387995 | MS.gene017600:CDS | 50.0% | |
| CTTCAGTTACCCAAACCGAG+AGG | - | chr8.3:28388532-28388551 | MS.gene017600:CDS | 50.0% | |
| CTTTGCCTGTTCAGCCACAT+GGG | + | chr8.3:28387388-28387407 | None:intergenic | 50.0% | |
| GACTCATCATCATCAGAGGG+AGG | + | chr8.3:28387261-28387280 | None:intergenic | 50.0% | |
| GAGGCTGTTCGTGCAAAACT+TGG | - | chr8.3:28388815-28388834 | MS.gene017600:CDS | 50.0% | |
| GATGCGCTGGATGAATTCAC+TGG | - | chr8.3:28389004-28389023 | MS.gene017600:CDS | 50.0% | |
| GGATGCAGGTCCATCTTCAA+AGG | - | chr8.3:28387071-28387090 | MS.gene017600:CDS | 50.0% | |
| TAGCTGCTGCGAACTTAGCT+CGG | + | chr8.3:28388358-28388377 | None:intergenic | 50.0% | |
| TATCAGGAGGGCAGAAAGCT+CGG | - | chr8.3:28388885-28388904 | MS.gene017600:CDS | 50.0% | |
| TCAGTGCTTGATGGAGACGA+TGG | - | chr8.3:28387465-28387484 | MS.gene017600:CDS | 50.0% | |
| TCTTTGCCTGTTCAGCCACA+TGG | + | chr8.3:28387389-28387408 | None:intergenic | 50.0% | |
| TGAGGATGAGACCCAAGTAG+AGG | - | chr8.3:28388418-28388437 | MS.gene017600:CDS | 50.0% | |
| TGAGTCTGAAGAGGAGCAAG+AGG | - | chr8.3:28387275-28387294 | MS.gene017600:CDS | 50.0% | |
| TGTGGCTGAACAGGCAAAGA+AGG | - | chr8.3:28387389-28387408 | MS.gene017600:CDS | 50.0% | |
| ! | AAGTGGAGGTGTGAGTTCAG+TGG | + | chr8.3:28388492-28388511 | None:intergenic | 50.0% |
| ! | AGTGGAGGTGTGAGTTCAGT+GGG | + | chr8.3:28388491-28388510 | None:intergenic | 50.0% |
| ! | GCCAGATTTGAAGCCACTTG+AGG | - | chr8.3:28387308-28387327 | MS.gene017600:CDS | 50.0% |
| ! | GTTCAGTGGGTTCAGGAAAG+TGG | + | chr8.3:28388478-28388497 | None:intergenic | 50.0% |
| ! | TTGACTTGAGGGCTGTTCTG+TGG | - | chr8.3:28388075-28388094 | MS.gene017600:CDS | 50.0% |
| !! | AGAGGTACCACACAAGTGGA+GGG | - | chr8.3:28388436-28388455 | MS.gene017600:CDS | 50.0% |
| !! | GAGCAAGGGTAAGGTTGATG+AGG | - | chr8.3:28388400-28388419 | MS.gene017600:CDS | 50.0% |
| !! | TAGAGGTACCACACAAGTGG+AGG | - | chr8.3:28388435-28388454 | MS.gene017600:CDS | 50.0% |
| AATCCTTTAGTGGCGGCTGG+AGG | - | chr8.3:28387979-28387998 | MS.gene017600:CDS | 55.0% | |
| AGCACCATTAGGCCCAACGA+TGG | + | chr8.3:28388609-28388628 | None:intergenic | 55.0% | |
| AGTCGGGCTTCAGTGCTTGA+TGG | - | chr8.3:28387456-28387475 | MS.gene017600:CDS | 55.0% | |
| ATCAGGAGGGCAGAAAGCTC+GGG | - | chr8.3:28388886-28388905 | MS.gene017600:CDS | 55.0% | |
| ATCGTTGGGCCTAATGGTGC+TGG | - | chr8.3:28388608-28388627 | MS.gene017600:CDS | 55.0% | |
| CTACCTCCTGCTCAACCAGA+AGG | + | chr8.3:28387689-28387708 | None:intergenic | 55.0% | |
| CTCTGCCATGTTGGCAGGTA+TGG | - | chr8.3:28387140-28387159 | MS.gene017600:CDS | 55.0% | |
| CTGGTTGAGCAGGAGGTAGT+TGG | - | chr8.3:28387690-28387709 | MS.gene017600:CDS | 55.0% | |
| CTGTAGTCCCTCCACTTGTG+TGG | + | chr8.3:28388446-28388465 | None:intergenic | 55.0% | |
| CTTGCTTACTAAGCCCCTCC+TGG | + | chr8.3:28388796-28388815 | None:intergenic | 55.0% | |
| GCGCTGGATGAATTCACTGG+TGG | - | chr8.3:28389007-28389026 | MS.gene017600:CDS | 55.0% | |
| GGACTCGTGTTGCCATCGTT+GGG | - | chr8.3:28388594-28388613 | MS.gene017600:CDS | 55.0% | |
| GGAGGGGCTTAGTAAGCAAG+AGG | - | chr8.3:28388796-28388815 | MS.gene017600:CDS | 55.0% | |
| GGTCTGGATGGAGACGAAGA+AGG | + | chr8.3:28388775-28388794 | None:intergenic | 55.0% | |
| GTTGCCATCGTTGGGCCTAA+TGG | - | chr8.3:28388602-28388621 | MS.gene017600:CDS | 55.0% | |
| TATGCAGAAGCTTTCGGGGC+AGG | + | chr8.3:28387219-28387238 | None:intergenic | 55.0% | |
| TCTGTCTCTGCCATGTTGGC+AGG | - | chr8.3:28387135-28387154 | MS.gene017600:CDS | 55.0% | |
| TCTTCGTCTCCATCCAGACC+AGG | - | chr8.3:28388775-28388794 | MS.gene017600:CDS | 55.0% | |
| TTACTAAGCCCCTCCTGGTC+TGG | + | chr8.3:28388791-28388810 | None:intergenic | 55.0% | |
| ! | GAAGCTTTCGGGGCAGGTTT+TGG | + | chr8.3:28387213-28387232 | None:intergenic | 55.0% |
| ! | GGTGTGAGTTCAGTGGGTTC+AGG | + | chr8.3:28388485-28388504 | None:intergenic | 55.0% |
| ! | TGACGTCCTTCTGGTTGAGC+AGG | - | chr8.3:28387680-28387699 | MS.gene017600:CDS | 55.0% |
| !! | TGATGCATTGGCTGATGCGC+TGG | - | chr8.3:28388991-28389010 | MS.gene017600:CDS | 55.0% |
| AGCTGCCCATGTGGCTGAAC+AGG | - | chr8.3:28387380-28387399 | MS.gene017600:CDS | 60.0% | |
| CAAGTGGAGGGACTACAGCG+TGG | - | chr8.3:28388448-28388467 | MS.gene017600:CDS | 60.0% | |
| CATCCTCCAGCCGCCACTAA+AGG | + | chr8.3:28387985-28388004 | None:intergenic | 60.0% | |
| CGTCTCCATCCAGACCAGGA+GGG | - | chr8.3:28388779-28388798 | MS.gene017600:CDS | 60.0% | |
| GGGACTCGTGTTGCCATCGT+TGG | - | chr8.3:28388593-28388612 | MS.gene017600:CDS | 60.0% | |
| GTCTCCATCCAGACCAGGAG+GGG | - | chr8.3:28388780-28388799 | MS.gene017600:CDS | 60.0% | |
| TAAGCCCCTCCTGGTCTGGA+TGG | + | chr8.3:28388787-28388806 | None:intergenic | 60.0% | |
| TCGTCTCCATCCAGACCAGG+AGG | - | chr8.3:28388778-28388797 | MS.gene017600:CDS | 60.0% | |
| ! | CGTCCTTCTGGTTGAGCAGG+AGG | - | chr8.3:28387683-28387702 | MS.gene017600:CDS | 60.0% |
| AGGAGGGCAGAAAGCTCGGG+TGG | - | chr8.3:28388889-28388908 | MS.gene017600:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 28387051 | 28389198 | 28387051 | ID=MS.gene017600 |
| chr8.3 | mRNA | 28387051 | 28389198 | 28387051 | ID=MS.gene017600.t1;Parent=MS.gene017600 |
| chr8.3 | exon | 28387051 | 28389198 | 28387051 | ID=MS.gene017600.t1.exon1;Parent=MS.gene017600.t1 |
| chr8.3 | CDS | 28387051 | 28389198 | 28387051 | ID=cds.MS.gene017600.t1;Parent=MS.gene017600.t1 |
| Gene Sequence |
| Protein sequence |
