Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018908.t1 | XP_013459271.1 | 97.5 | 197 | 5 | 0 | 1 | 197 | 1 | 197 | 2.70E-102 | 381.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018908.t1 | O13737 | 36.8 | 182 | 98 | 3 | 6 | 186 | 4 | 169 | 4.4e-21 | 102.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018908.t1 | A0A072UUK5 | 97.5 | 197 | 5 | 0 | 1 | 197 | 1 | 197 | 1.9e-102 | 381.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene03534 | MS.gene018908 | PPI |
| MS.gene018908 | MS.gene018905 | PPI |
| MS.gene067529 | MS.gene018908 | PPI |
| MS.gene03531 | MS.gene018908 | PPI |
| MS.gene067528 | MS.gene018908 | PPI |
| MS.gene067530 | MS.gene018908 | PPI |
| MS.gene018905 | MS.gene018908 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018908.t1 | MTR_3g435230 | 97.462 | 197 | 5 | 0 | 1 | 197 | 1 | 197 | 9.53e-140 | 388 |
| MS.gene018908.t1 | MTR_3g435250 | 76.650 | 197 | 46 | 0 | 1 | 197 | 1 | 197 | 1.01e-109 | 312 |
| MS.gene018908.t1 | MTR_3g435170 | 78.378 | 185 | 40 | 0 | 1 | 185 | 1 | 185 | 2.90e-108 | 308 |
| MS.gene018908.t1 | MTR_3g435200 | 73.096 | 197 | 51 | 1 | 1 | 197 | 1 | 195 | 1.51e-105 | 301 |
| MS.gene018908.t1 | MTR_3g435230 | 98.519 | 135 | 2 | 0 | 1 | 135 | 1 | 135 | 2.28e-92 | 266 |
| MS.gene018908.t1 | MTR_5g041930 | 63.131 | 198 | 71 | 2 | 2 | 197 | 5 | 202 | 1.90e-91 | 266 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018908.t1 | AT1G18720 | 62.626 | 198 | 71 | 1 | 1 | 195 | 5 | 202 | 1.69e-87 | 256 |
| MS.gene018908.t1 | AT1G18720 | 62.626 | 198 | 71 | 1 | 1 | 195 | 5 | 202 | 1.69e-87 | 256 |
| MS.gene018908.t1 | AT1G74440 | 60.000 | 195 | 71 | 2 | 1 | 190 | 5 | 197 | 1.90e-80 | 238 |
| MS.gene018908.t1 | AT1G74440 | 60.000 | 195 | 71 | 2 | 1 | 190 | 5 | 197 | 1.90e-80 | 238 |
Find 0 sgRNAs with CRISPR-Local
Find 160 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACATAATTAAATAAGATAA+AGG | + | 23448:42151-42170 | None:intergenic | 10.0% |
| !!! | ACTATTTTAATTTGTTTTTT+AGG | - | 23448:43085-43104 | MS.gene018908:CDS | 10.0% |
| !! | ATTATTTACACATTTAAACA+AGG | - | 23448:41186-41205 | MS.gene018908:intron | 15.0% |
| !! | ATTCCATATATTGTATTATT+TGG | + | 23448:41004-41023 | None:intergenic | 15.0% |
| !! | TAATTAAATAAGATAAAGGT+TGG | + | 23448:42147-42166 | None:intergenic | 15.0% |
| !! | TCTTACTTAATATAAATCAA+AGG | + | 23448:42757-42776 | None:intergenic | 15.0% |
| !! | TTAAAAAAACTAAAACATAG+TGG | + | 23448:42332-42351 | None:intergenic | 15.0% |
| !! | TTTCTTCATATAATTTAGAA+CGG | + | 23448:42085-42104 | None:intergenic | 15.0% |
| !!! | AAAATGTAATTTGTATTGTA+TGG | + | 23448:41420-41439 | None:intergenic | 15.0% |
| !!! | CAAAAAATTATTTTTTCCAA+AGG | - | 23448:42175-42194 | MS.gene018908:intron | 15.0% |
| !!! | GTTTTTTTTGCTTATAATTT+GGG | + | 23448:42125-42144 | None:intergenic | 15.0% |
| !! | TACTTAATATAAATCAAAGG+TGG | + | 23448:42754-42773 | None:intergenic | 20.0% |
| !! | TAGAAGCTAATATTAAAGAA+TGG | - | 23448:43171-43190 | MS.gene018908:CDS | 20.0% |
| !! | TATAAGATTAAGAACTGTTT+GGG | + | 23448:40682-40701 | None:intergenic | 20.0% |
| !! | TATTGACATATGAATCTAAA+GGG | - | 23448:41667-41686 | MS.gene018908:intron | 20.0% |
| !! | TGTCCAAATAATACAATATA+TGG | - | 23448:40998-41017 | MS.gene018908:intron | 20.0% |
| !! | TTATTGACATATGAATCTAA+AGG | - | 23448:41666-41685 | MS.gene018908:intron | 20.0% |
| !! | TTCCTATAAAACTTATTTCA+AGG | - | 23448:42281-42300 | MS.gene018908:intron | 20.0% |
| !! | TTTGTATGTTTAATGTGATA+AGG | + | 23448:41923-41942 | None:intergenic | 20.0% |
| !!! | ATCCTTGAAATAAGTTTTAT+AGG | + | 23448:42286-42305 | None:intergenic | 20.0% |
| !!! | GATGTAAAAACAATTTTCAT+TGG | + | 23448:42261-42280 | None:intergenic | 20.0% |
| !!! | GGTTTTTTTTGCTTATAATT+TGG | + | 23448:42126-42145 | None:intergenic | 20.0% |
| !!! | TAATAAAGTAGTTGATAGTT+GGG | - | 23448:42526-42545 | MS.gene018908:intron | 20.0% |
| !!! | TATAATTTGGGACAAAAAAA+TGG | + | 23448:42113-42132 | None:intergenic | 20.0% |
| !!! | TCAAGATTACATTTTTTTCA+GGG | + | 23448:41879-41898 | None:intergenic | 20.0% |
| !!! | TTAATAAAGTAGTTGATAGT+TGG | - | 23448:42525-42544 | MS.gene018908:intron | 20.0% |
| !!! | TTTGTTTTTATCGTAATAGT+TGG | + | 23448:41109-41128 | None:intergenic | 20.0% |
| !!! | TTTTTACTTATAATATGGGA+CGG | - | 23448:42370-42389 | MS.gene018908:intron | 20.0% |
| ! | AAAACAAACATAATACTCCA+TGG | - | 23448:41940-41959 | MS.gene018908:intron | 25.0% |
| ! | AGCTAATATTAAAGAATGGA+AGG | - | 23448:43175-43194 | MS.gene018908:CDS | 25.0% |
| ! | ATTTAGAAAATGAAAGAGAG+AGG | + | 23448:42229-42248 | None:intergenic | 25.0% |
| ! | CTGAATAAATGTTGAATTAG+TGG | - | 23448:42004-42023 | MS.gene018908:intron | 25.0% |
| ! | CTTCACTTCATTAATTAAGT+TGG | + | 23448:42420-42439 | None:intergenic | 25.0% |
| ! | GTATAAGATTAAGAACTGTT+TGG | + | 23448:40683-40702 | None:intergenic | 25.0% |
| ! | GTCAATAACGAATTCATTAT+TGG | + | 23448:41654-41673 | None:intergenic | 25.0% |
| ! | TTACCATTAGACTAAACTAT+TGG | + | 23448:40938-40957 | None:intergenic | 25.0% |
| ! | TTGTGAAAAATAATAGAGCA+AGG | + | 23448:42903-42922 | None:intergenic | 25.0% |
| ! | TTTAATGTGATAAGGTTCAT+TGG | + | 23448:41915-41934 | None:intergenic | 25.0% |
| ! | TTTGATTCAAATTGGAAACA+AGG | - | 23448:43059-43078 | MS.gene018908:CDS | 25.0% |
| !! | TTCATATAATTTAGAACGGA+TGG | + | 23448:42081-42100 | None:intergenic | 25.0% |
| !!! | AGGGATAAATTTGTCATTTT+GGG | - | 23448:42686-42705 | MS.gene018908:intron | 25.0% |
| !!! | CTTTGCATTTAATTTTCCTT+TGG | + | 23448:42194-42213 | None:intergenic | 25.0% |
| !!! | GTCAAGATTACATTTTTTTC+AGG | + | 23448:41880-41899 | None:intergenic | 25.0% |
| AAATCATTGATCCATCCTAT+TGG | - | 23448:42873-42892 | MS.gene018908:intron | 30.0% | |
| AAATGCATCCTTATCATCAT+AGG | - | 23448:41829-41848 | MS.gene018908:intron | 30.0% | |
| ACTCCAATAGTTTAGTCTAA+TGG | - | 23448:40932-40951 | MS.gene018908:intron | 30.0% | |
| AGTAAGATTCTGCTTTGATT+AGG | - | 23448:42770-42789 | MS.gene018908:intron | 30.0% | |
| GAGACATGTTTGATATACTT+AGG | + | 23448:42552-42571 | None:intergenic | 30.0% | |
| TATAAGTGCCTATGATGATA+AGG | + | 23448:41840-41859 | None:intergenic | 30.0% | |
| TATATGTGTTAGAACCAAGT+TGG | + | 23448:41272-41291 | None:intergenic | 30.0% | |
| TGATTCTTGAGGTAATTACT+TGG | - | 23448:43017-43036 | MS.gene018908:CDS | 30.0% | |
| TTATCATCATAGGCACTTAT+AGG | - | 23448:41839-41858 | MS.gene018908:intron | 30.0% | |
| TTGGTTCCTCATTATAGATT+AGG | - | 23448:41295-41314 | MS.gene018908:intron | 30.0% | |
| ! | ATATGGATTGCAACGTTTAT+AGG | + | 23448:40588-40607 | None:intergenic | 30.0% |
| ! | GGTTCTAACACATATAAACT+TGG | - | 23448:41276-41295 | MS.gene018908:intron | 30.0% |
| ! | GTAAAAAAGAGCGTAGAAAA+CGG | + | 23448:40742-40761 | None:intergenic | 30.0% |
| ! | TATGGATTGCAACGTTTATA+GGG | + | 23448:40587-40606 | None:intergenic | 30.0% |
| ! | TGTCTCTTTTATTCATTGAG+TGG | - | 23448:42566-42585 | MS.gene018908:intron | 30.0% |
| !! | ATTAAAGCTGGTTCTTTTGT+TGG | - | 23448:40774-40793 | MS.gene018908:CDS | 30.0% |
| !! | CAGGGATAAATTTGTCATTT+TGG | - | 23448:42685-42704 | MS.gene018908:intron | 30.0% |
| !! | CTTCATCACTTTTCTTTGTT+GGG | - | 23448:40797-40816 | MS.gene018908:intron | 30.0% |
| !!! | AATTTGTCATTTTGGGTGTT+AGG | - | 23448:42693-42712 | MS.gene018908:intron | 30.0% |
| !!! | ATTTGTCATTTTGGGTGTTA+GGG | - | 23448:42694-42713 | MS.gene018908:intron | 30.0% |
| !!! | GAACTGGTTTTGATTCAAAT+TGG | - | 23448:43051-43070 | MS.gene018908:CDS | 30.0% |
| AAGATTAAGAACTGTTTGGG+AGG | + | 23448:40679-40698 | None:intergenic | 35.0% | |
| AATGCAGGAAAGCAACAAAT+TGG | - | 23448:42643-42662 | MS.gene018908:intron | 35.0% | |
| ACAATGAACATGCAAGGTAT+AGG | - | 23448:42039-42058 | MS.gene018908:intron | 35.0% | |
| ACGTGCATTCTTAGCATAAT+AGG | - | 23448:42468-42487 | MS.gene018908:intron | 35.0% | |
| ACTATCAAGCTTCATTTACG+TGG | + | 23448:41796-41815 | None:intergenic | 35.0% | |
| AGATTAAGAACTGTTTGGGA+GGG | + | 23448:40678-40697 | None:intergenic | 35.0% | |
| AGGGAAATGACTTGATATTC+AGG | - | 23448:42666-42685 | MS.gene018908:intron | 35.0% | |
| AGTCTATTGTTGATGCTAAG+AGG | - | 23448:41743-41762 | MS.gene018908:intron | 35.0% | |
| AGTTTCATTGCCAATTCACT+CGG | - | 23448:40828-40847 | MS.gene018908:intron | 35.0% | |
| ATTGGACAGTTTATTGGTCA+TGG | - | 23448:42838-42857 | MS.gene018908:intron | 35.0% | |
| CAAGGTTGAAAACAAAGACA+GGG | + | 23448:40707-40726 | None:intergenic | 35.0% | |
| CAATCCATATCCTCTTTGTT+TGG | - | 23448:40598-40617 | MS.gene018908:CDS | 35.0% | |
| GATTAGGACTCTAATCTTTC+AGG | - | 23448:42786-42805 | MS.gene018908:intron | 35.0% | |
| GGGAAATGACTTGATATTCA+GGG | - | 23448:42667-42686 | MS.gene018908:intron | 35.0% | |
| TACTTATAATATGGGACGGA+GGG | - | 23448:42374-42393 | MS.gene018908:intron | 35.0% | |
| TCATTGACAATGAACATGCA+AGG | - | 23448:42033-42052 | MS.gene018908:intron | 35.0% | |
| TCCAATCCAACCAATCAATT+GGG | + | 23448:42824-42843 | None:intergenic | 35.0% | |
| TCTTTATGTCTTGACCAACT+TGG | - | 23448:41255-41274 | MS.gene018908:intron | 35.0% | |
| TGCAATTAGGGTTAGAGATT+TGG | - | 23448:42718-42737 | MS.gene018908:intron | 35.0% | |
| TGCCTTCTATGAAATTTGCA+AGG | - | 23448:41970-41989 | MS.gene018908:intron | 35.0% | |
| TGCCTTGCAAATTTCATAGA+AGG | + | 23448:41975-41994 | None:intergenic | 35.0% | |
| TTACTTATAATATGGGACGG+AGG | - | 23448:42373-42392 | MS.gene018908:intron | 35.0% | |
| TTTGCTTGAAATCCAGGATA+TGG | + | 23448:43137-43156 | None:intergenic | 35.0% | |
| ! | AGTTGGTCTATGTCTAAAAG+TGG | + | 23448:41092-41111 | None:intergenic | 35.0% |
| ! | CTTGTTCAAGCTCTTTTGAT+GGG | - | 23448:42983-43002 | MS.gene018908:CDS | 35.0% |
| !! | GAAAAGCACTTTGCATTCTA+TGG | - | 23448:40546-40565 | MS.gene018908:CDS | 35.0% |
| !! | GCTTCATCACTTTTCTTTGT+TGG | - | 23448:40796-40815 | MS.gene018908:intron | 35.0% |
| !! | TCTAATCTTTCAGGTTGTGT+TGG | - | 23448:42795-42814 | MS.gene018908:intron | 35.0% |
| AAACGGTGAAGATGAAACCA+AGG | + | 23448:40725-40744 | None:intergenic | 40.0% | |
| AAGTTCGAATCCGAGTGAAT+TGG | + | 23448:40841-40860 | None:intergenic | 40.0% | |
| ACACTCAACTATCCACCATT+TGG | + | 23448:41332-41351 | None:intergenic | 40.0% | |
| ACCAAGGAAAAATGTGTGAG+TGG | - | 23448:42595-42614 | MS.gene018908:intron | 40.0% | |
| ACCTCAAGAATCACGAAGAA+AGG | + | 23448:43010-43029 | None:intergenic | 40.0% | |
| ACCTTTCTTCGTGATTCTTG+AGG | - | 23448:43006-43025 | MS.gene018908:CDS | 40.0% | |
| AGGATATGGCTCATATCCAA+TGG | + | 23448:43123-43142 | None:intergenic | 40.0% | |
| ATAGAGCAAGGTTGTCCAAT+AGG | + | 23448:42891-42910 | None:intergenic | 40.0% | |
| ATTGGATATGAGCCATATCC+TGG | - | 23448:43122-43141 | MS.gene018908:CDS | 40.0% | |
| CAGGAAAGCAACAAATTGGA+GGG | - | 23448:42647-42666 | MS.gene018908:intron | 40.0% | |
| CATATCCAATGGATGATTGG+AGG | + | 23448:43112-43131 | None:intergenic | 40.0% | |
| CATGCAAGGTATAGGATCAT+AGG | - | 23448:42047-42066 | MS.gene018908:intron | 40.0% | |
| CCAAGGAAAAATGTGTGAGT+GGG | - | 23448:42596-42615 | MS.gene018908:intron | 40.0% | |
| CCAAGGTTGAAAACAAAGAC+AGG | + | 23448:40708-40727 | None:intergenic | 40.0% | |
| CCATCAAAAGAGCTTGAACA+AGG | + | 23448:42985-43004 | None:intergenic | 40.0% | |
| GCTCATATCCAATGGATGAT+TGG | + | 23448:43115-43134 | None:intergenic | 40.0% | |
| GGCAGACCTAATCTATAATG+AGG | + | 23448:41304-41323 | None:intergenic | 40.0% | |
| GTAGAATGAGAGCAGTGAAA+AGG | + | 23448:40629-40648 | None:intergenic | 40.0% | |
| GTCCAATCCAACCAATCAAT+TGG | + | 23448:42825-42844 | None:intergenic | 40.0% | |
| TATTTGGACACACGTGAACT+CGG | + | 23448:40988-41007 | None:intergenic | 40.0% | |
| TGGATTTCAAGCAAACGTGA+AGG | - | 23448:43142-43161 | MS.gene018908:CDS | 40.0% | |
| TTCACGTTTGCTTGAAATCC+AGG | + | 23448:43143-43162 | None:intergenic | 40.0% | |
| ! | CCTTGTTCAAGCTCTTTTGA+TGG | - | 23448:42982-43001 | MS.gene018908:CDS | 40.0% |
| ! | GCTGCTTTGGATATTAAAGC+TGG | - | 23448:40762-40781 | MS.gene018908:CDS | 40.0% |
| ! | GGTTGGATTGGACAGTTTAT+TGG | - | 23448:42832-42851 | MS.gene018908:intron | 40.0% |
| ! | TGATGCTAAGAGGCACAAAT+AGG | - | 23448:41753-41772 | MS.gene018908:intron | 40.0% |
| !! | AATGGTGGATAGTTGAGTGT+AGG | - | 23448:41332-41351 | MS.gene018908:intron | 40.0% |
| !! | ATAGAAGGCATTTGATGCCA+TGG | + | 23448:41960-41979 | None:intergenic | 40.0% |
| !! | ATGGTGGATAGTTGAGTGTA+GGG | - | 23448:41333-41352 | MS.gene018908:intron | 40.0% |
| !!! | CCTGTCTTTGTTTTCAACCT+TGG | - | 23448:40705-40724 | MS.gene018908:intron | 40.0% |
| AAAGGAGAGGCCAAACAAAG+AGG | + | 23448:40611-40630 | None:intergenic | 45.0% | |
| ACAAGGTTGTCCAATAGAGC+TGG | + | 23448:42968-42987 | None:intergenic | 45.0% | |
| ACTATCCACCATTTGGCTAG+AGG | + | 23448:41325-41344 | None:intergenic | 45.0% | |
| AGCAAGGTTGTCCAATAGGA+TGG | + | 23448:42887-42906 | None:intergenic | 45.0% | |
| ATGAGAGCAGTGAAAAGGAG+AGG | + | 23448:40624-40643 | None:intergenic | 45.0% | |
| ATTTGGACACACGTGAACTC+GGG | + | 23448:40987-41006 | None:intergenic | 45.0% | |
| GAGGCCAAACAAAGAGGATA+TGG | + | 23448:40605-40624 | None:intergenic | 45.0% | |
| GAGTGGTTCAAGACTAATGC+AGG | - | 23448:42628-42647 | MS.gene018908:intron | 45.0% | |
| GCAGGAAAGCAACAAATTGG+AGG | - | 23448:42646-42665 | MS.gene018908:intron | 45.0% | |
| GTGAGATAGTTGTAGTCCTG+TGG | - | 23448:42439-42458 | MS.gene018908:intron | 45.0% | |
| GTTTGGGAGGGAGTGAAAAT+AGG | + | 23448:40666-40685 | None:intergenic | 45.0% | |
| TAGGTCCTCCAATCATCCAT+TGG | - | 23448:43104-43123 | MS.gene018908:CDS | 45.0% | |
| TATTGGTCATGGTGCGTTTG+AGG | - | 23448:42849-42868 | MS.gene018908:intron | 45.0% | |
| TGGTTGCCCAATTGATTGGT+TGG | - | 23448:42815-42834 | MS.gene018908:intron | 45.0% | |
| TTCAAGCAAACGTGAAGGCA+AGG | - | 23448:43147-43166 | MS.gene018908:CDS | 45.0% | |
| ! | CCCACTCACACATTTTTCCT+TGG | + | 23448:42599-42618 | None:intergenic | 45.0% |
| ! | CTTGGCATAGTGCTTTGAAC+TGG | - | 23448:43035-43054 | MS.gene018908:CDS | 45.0% |
| ! | GAATGCACGTTTTTCACCAC+AGG | + | 23448:42458-42477 | None:intergenic | 45.0% |
| ! | GCCCAATTGATTGGTTGGAT+TGG | - | 23448:42820-42839 | MS.gene018908:intron | 45.0% |
| ! | TGGTGGATAGTTGAGTGTAG+GGG | - | 23448:41334-41353 | MS.gene018908:intron | 45.0% |
| !! | GTGTTGGTTGCCCAATTGAT+TGG | - | 23448:42811-42830 | MS.gene018908:intron | 45.0% |
| !!! | CGCTCTTTTTTACGCTGCTT+TGG | - | 23448:40749-40768 | MS.gene018908:CDS | 45.0% |
| !!! | TAAAAATCATAAAATATTTT+GGG | + | 23448:41581-41600 | None:intergenic | 5.0% |
| !!! | TTAAAAATCATAAAATATTT+TGG | + | 23448:41582-41601 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTACTTATAATAT+GGG | - | 23448:42366-42385 | MS.gene018908:intron | 5.0% |
| !!! | TTTTTTTTTTACTTATAATA+TGG | - | 23448:42365-42384 | MS.gene018908:intron | 5.0% |
| CATTGAGTGGCTCAAGACCA+AGG | - | 23448:42579-42598 | MS.gene018908:intron | 50.0% | |
| GAAACGTGCACCAGCTCTAT+TGG | - | 23448:42955-42974 | MS.gene018908:CDS | 50.0% | |
| GGAGGGAGTGAAAATAGGAG+GGG | + | 23448:40661-40680 | None:intergenic | 50.0% | |
| GGGAGGGAGTGAAAATAGGA+GGG | + | 23448:40662-40681 | None:intergenic | 50.0% | |
| GGGTGTTAGGGCTGCAATTA+GGG | - | 23448:42706-42725 | MS.gene018908:intron | 50.0% | |
| TAGGTCTGCCTCTAGCCAAA+TGG | - | 23448:41314-41333 | MS.gene018908:intron | 50.0% | |
| TGAGTGGGTCAGAGTTTGAG+TGG | - | 23448:42611-42630 | MS.gene018908:intron | 50.0% | |
| TGGGAGGGAGTGAAAATAGG+AGG | + | 23448:40663-40682 | None:intergenic | 50.0% | |
| TGGGTGTTAGGGCTGCAATT+AGG | - | 23448:42705-42724 | MS.gene018908:intron | 50.0% | |
| ! | CACTCGGATTCGAACTTGCT+TGG | - | 23448:40844-40863 | MS.gene018908:intron | 50.0% |
| ! | CGGATTCGAACTTGCTTGGA+AGG | - | 23448:40848-40867 | MS.gene018908:intron | 50.0% |
| GTCTGCCTCTAGCCAAATGG+TGG | - | 23448:41317-41336 | MS.gene018908:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 23448 | gene | 40528 | 43223 | 40528 | ID=MS.gene018908 |
| 23448 | mRNA | 40528 | 43223 | 40528 | ID=MS.gene018908.t1;Parent=MS.gene018908 |
| 23448 | exon | 42882 | 43223 | 42882 | ID=MS.gene018908.t1.exon1;Parent=MS.gene018908.t1 |
| 23448 | CDS | 42882 | 43223 | 42882 | ID=cds.MS.gene018908.t1;Parent=MS.gene018908.t1 |
| 23448 | exon | 40881 | 40943 | 40881 | ID=MS.gene018908.t1.exon2;Parent=MS.gene018908.t1 |
| 23448 | CDS | 40881 | 40943 | 40881 | ID=cds.MS.gene018908.t1;Parent=MS.gene018908.t1 |
| 23448 | exon | 40724 | 40795 | 40724 | ID=MS.gene018908.t1.exon3;Parent=MS.gene018908.t1 |
| 23448 | CDS | 40724 | 40795 | 40724 | ID=cds.MS.gene018908.t1;Parent=MS.gene018908.t1 |
| 23448 | exon | 40528 | 40644 | 40528 | ID=MS.gene018908.t1.exon4;Parent=MS.gene018908.t1 |
| 23448 | CDS | 40528 | 40644 | 40528 | ID=cds.MS.gene018908.t1;Parent=MS.gene018908.t1 |
| Gene Sequence |
| Protein sequence |
