AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene019838

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene019838.t1 MTR_6g034515 96.458 367 7 4 5 370 1 362 0.0 706
MS.gene019838.t1 MTR_1g097890 35.484 279 146 5 53 329 38 284 1.89e-43 153
MS.gene019838.t1 MTR_8g092080 35.495 293 149 8 41 329 29 285 3.19e-41 147
MS.gene019838.t1 MTR_8g098240 33.010 309 156 10 53 343 306 581 3.34e-35 136
MS.gene019838.t1 MTR_8g098240 27.222 180 118 5 73 245 414 587 1.95e-11 65.9
MS.gene019838.t1 MTR_3g025800 34.314 306 156 8 78 346 31 328 1.01e-32 125
MS.gene019838.t1 MTR_1g095780 31.034 290 178 6 75 360 525 796 2.58e-29 120
MS.gene019838.t1 MTR_2g032610 30.000 280 166 8 87 343 41 313 6.44e-29 114
MS.gene019838.t1 MTR_2g032610 28.358 201 129 4 169 360 30 224 2.38e-15 76.6
MS.gene019838.t1 MTR_7g015870 28.155 309 174 12 81 361 29 317 5.19e-27 109
MS.gene019838.t1 MTR_5g073040 28.819 288 193 6 77 358 41 322 1.20e-26 108
MS.gene019838.t1 MTR_7g015870 28.727 275 157 10 81 327 25 288 1.92e-26 108
MS.gene019838.t1 MTR_7g015870 28.333 180 114 4 182 352 35 208 3.40e-13 70.1
MS.gene019838.t1 MTR_4g012850 27.483 302 193 8 70 358 14 302 3.14e-25 104
MS.gene019838.t1 MTR_8g096050 29.861 288 178 8 70 346 225 499 4.26e-25 106
MS.gene019838.t1 MTR_6g015860 26.280 293 179 7 76 343 20 300 9.23e-25 103
MS.gene019838.t1 MTR_8g066975 30.612 294 176 6 77 349 10 296 2.03e-24 102
MS.gene019838.t1 MTR_4g119770 25.796 314 196 7 68 344 7 320 8.43e-24 100
MS.gene019838.t1 MTR_4g114320 27.915 283 188 6 77 352 125 398 8.73e-24 101
MS.gene019838.t1 MTR_4g114320 29.208 202 126 4 169 367 124 311 7.33e-16 78.6
MS.gene019838.t1 MTR_4g057850 30.072 276 166 8 72 330 19 284 9.96e-24 100
MS.gene019838.t1 MTR_2g102010 28.523 298 169 9 70 345 15 290 1.13e-23 99.8
MS.gene019838.t1 MTR_2g436930 27.010 311 192 9 68 343 8 318 4.49e-23 98.6
MS.gene019838.t1 MTR_1g012030 25.725 276 190 5 77 346 141 407 4.25e-22 97.4
MS.gene019838.t1 MTR_7g064980 26.667 300 194 6 77 356 27 320 2.03e-21 94.0
MS.gene019838.t1 MTR_7g064980 27.624 181 121 4 72 242 131 311 2.67e-13 70.5
MS.gene019838.t1 MTR_7g084400 26.596 282 181 7 77 346 215 482 2.07e-21 95.9
MS.gene019838.t1 MTR_3g107510 25.267 281 195 5 77 351 124 395 7.88e-21 93.2
MS.gene019838.t1 MTR_3g107510 31.579 190 118 3 170 357 124 303 4.04e-17 82.4
MS.gene019838.t1 MTR_6g033280 27.027 333 207 11 35 349 21 335 2.81e-20 91.3
MS.gene019838.t1 MTR_5g030530 28.571 294 182 5 77 349 10 296 3.64e-20 90.1
MS.gene019838.t1 MTR_7g083790 29.470 302 174 12 47 329 53 334 4.96e-20 90.9
MS.gene019838.t1 MTR_8g076760 26.523 279 174 9 89 343 28 299 2.40e-18 85.1
MS.gene019838.t1 MTR_3g098460 26.408 284 182 7 77 346 207 477 3.63e-18 86.3
MS.gene019838.t1 MTR_8g099910 27.726 321 193 14 48 349 45 345 3.36e-17 82.4
MS.gene019838.t1 MTR_4g088545 27.338 278 164 7 77 328 14 279 3.36e-17 81.6
MS.gene019838.t1 MTR_1g087840 25.000 280 176 8 85 343 31 297 3.38e-17 81.6
MS.gene019838.t1 MTR_1g087840 28.485 165 103 5 91 241 136 299 1.45e-12 68.2
MS.gene019838.t1 MTR_3g104600 27.273 308 176 9 62 335 25 318 3.88e-17 82.0
MS.gene019838.t1 MTR_3g104600 25.000 212 137 3 162 355 29 236 4.66e-14 72.8
MS.gene019838.t1 MTR_8g019480 26.087 299 159 11 87 336 45 330 7.00e-17 81.3
MS.gene019838.t1 MTR_4g005330 25.152 330 197 9 46 346 42 350 9.89e-17 80.9
MS.gene019838.t1 MTR_5g081150 27.986 293 184 6 77 349 36 321 1.26e-16 80.5
MS.gene019838.t1 MTR_4g088545 28.814 236 138 6 77 286 14 245 1.38e-16 79.3
MS.gene019838.t1 MTR_8g027975 23.746 299 198 8 77 346 53 350 1.50e-16 80.5
MS.gene019838.t1 MTR_7g109135 26.144 306 183 11 74 358 25 308 2.13e-16 79.3
MS.gene019838.t1 MTR_4g088545 30.435 184 108 4 77 242 14 195 2.28e-16 78.2
MS.gene019838.t1 MTR_7g109135 28.082 292 172 11 74 343 25 300 3.14e-16 79.0
MS.gene019838.t1 MTR_7g109135 29.545 176 109 5 91 252 139 313 3.25e-15 76.3
MS.gene019838.t1 MTR_7g109135 30.476 210 130 5 170 369 24 227 5.27e-12 66.6
MS.gene019838.t1 MTR_4g005330 25.753 299 177 7 77 346 2 284 4.53e-16 78.2
MS.gene019838.t1 MTR_2g436930 29.474 190 119 7 169 343 39 228 6.28e-16 77.0
MS.gene019838.t1 MTR_7g109135 29.545 176 109 5 91 252 40 214 7.19e-16 76.3
MS.gene019838.t1 MTR_7g117030 26.250 320 164 13 65 328 11 314 1.10e-15 77.8
MS.gene019838.t1 MTR_7g109135 29.545 176 109 5 91 252 61 235 1.10e-15 76.3
MS.gene019838.t1 MTR_5g055410 25.490 306 190 12 85 364 33 326 2.29e-15 77.0
MS.gene019838.t1 MTR_6g091800 25.980 204 140 3 162 355 13 215 3.33e-15 75.5
MS.gene019838.t1 MTR_6g091800 25.980 204 140 3 162 355 13 215 3.69e-15 75.1
MS.gene019838.t1 MTR_5g009500 23.311 296 201 7 77 346 40 335 7.14e-15 75.5
MS.gene019838.t1 MTR_6g091800 25.854 205 141 3 161 355 12 215 7.65e-15 75.1
MS.gene019838.t1 MTR_6g091800 24.116 311 196 10 77 363 21 315 3.77e-14 72.8
MS.gene019838.t1 MTR_3g090820 22.283 368 195 10 41 328 10 366 4.85e-14 73.2
MS.gene019838.t1 MTR_4g119770 24.409 254 158 5 68 287 7 260 6.96e-14 71.2
MS.gene019838.t1 MTR_8g068890 24.684 316 176 8 78 346 9 309 9.44e-14 71.6
MS.gene019838.t1 MTR_6g034145 27.097 155 108 1 206 355 7 161 2.97e-13 69.7
MS.gene019838.t1 MTR_6g092210 27.815 151 106 2 206 355 7 155 3.37e-13 69.3
MS.gene019838.t1 MTR_8g086070 27.014 211 132 5 167 370 20 215 8.87e-13 68.6
MS.gene019838.t1 MTR_5g032420 24.367 316 184 8 78 346 9 316 1.04e-12 68.6
MS.gene019838.t1 MTR_1g088995 24.658 292 183 10 79 356 37 305 1.30e-12 68.2
MS.gene019838.t1 MTR_8g086070 26.341 205 132 4 167 364 20 212 1.43e-12 66.6
MS.gene019838.t1 MTR_6g091800 27.746 173 114 3 162 324 13 184 2.14e-12 65.9
MS.gene019838.t1 MTR_7g068340 26.786 168 110 2 202 369 131 285 5.08e-12 67.0
MS.gene019838.t1 MTR_1g090330 24.365 197 129 5 172 353 18 209 1.36e-11 65.1
MS.gene019838.t1 MTR_5g039730 27.465 284 176 10 75 337 11 285 5.83e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene019838.t1 AT5G42130 61.017 413 111 7 5 368 1 412 9.04e-156 444
MS.gene019838.t1 AT1G34065 32.425 367 189 12 2 356 22 341 1.44e-43 154
MS.gene019838.t1 AT1G34065 29.016 193 112 5 169 361 83 250 1.41e-12 68.6
MS.gene019838.t1 AT1G34065 32.065 368 191 12 1 356 14 334 2.30e-43 154
MS.gene019838.t1 AT1G34065 29.016 193 112 5 169 361 76 243 1.61e-12 68.2
MS.gene019838.t1 AT4G39460 36.162 271 144 6 63 329 46 291 1.29e-41 149
MS.gene019838.t1 AT4G39460 36.162 271 144 6 63 329 46 291 1.29e-41 149
MS.gene019838.t1 AT4G39460 36.162 271 144 6 63 329 46 291 1.29e-41 149
MS.gene019838.t1 AT1G74240 35.314 303 154 6 78 346 39 333 7.86e-34 129
MS.gene019838.t1 AT4G11440 31.469 286 161 8 75 343 330 597 4.63e-32 127
MS.gene019838.t1 AT4G11440 31.469 286 161 8 75 343 330 597 4.63e-32 127
MS.gene019838.t1 AT1G74240 34.247 292 150 6 89 346 2 285 1.01e-29 117
MS.gene019838.t1 AT2G26360 30.769 286 176 7 75 354 115 384 8.53e-28 112
MS.gene019838.t1 AT2G35800 28.881 277 179 4 75 349 545 805 1.08e-27 115
MS.gene019838.t1 AT5G15640 28.754 313 179 10 69 356 24 317 2.19e-27 110
MS.gene019838.t1 AT5G15640 28.837 215 132 6 146 351 12 214 2.05e-13 70.9
MS.gene019838.t1 AT2G30160 28.205 312 188 8 54 346 24 318 3.46e-27 110
MS.gene019838.t1 AT5G15640 29.043 303 171 10 81 356 25 310 4.79e-27 109
MS.gene019838.t1 AT1G07030 29.562 274 181 5 77 343 42 310 1.59e-26 108
MS.gene019838.t1 AT2G37890 30.483 269 162 6 77 326 47 309 1.01e-25 106
MS.gene019838.t1 AT2G37890 28.070 171 98 5 206 367 92 246 1.08e-13 71.6
MS.gene019838.t1 AT2G37890 26.705 176 119 3 77 242 154 329 1.84e-12 68.2
MS.gene019838.t1 AT5G01340 31.673 281 156 11 72 330 14 280 1.83e-25 105
MS.gene019838.t1 AT3G53940 29.123 285 179 5 77 343 75 354 1.02e-24 103
MS.gene019838.t1 AT3G53940 31.250 176 111 4 77 242 182 357 3.27e-15 76.6
MS.gene019838.t1 AT3G53940 29.167 168 100 4 206 367 120 274 4.15e-12 67.4
MS.gene019838.t1 AT3G21390 27.003 337 199 9 46 345 22 348 9.60e-24 101
MS.gene019838.t1 AT3G21390 27.027 333 196 9 50 345 4 326 1.64e-23 100
MS.gene019838.t1 AT5G48970 26.433 314 191 9 69 343 16 328 9.49e-23 98.2
MS.gene019838.t1 AT1G79900 30.258 271 166 8 90 352 31 286 1.42e-22 96.7
MS.gene019838.t1 AT2G33820 28.179 291 175 7 77 343 20 300 3.94e-22 95.9
MS.gene019838.t1 AT3G55640 26.990 289 188 6 77 347 40 323 6.73e-22 95.5
MS.gene019838.t1 AT3G55640 28.804 184 121 4 72 245 142 325 1.35e-13 71.6
MS.gene019838.t1 AT3G55640 27.103 214 128 7 169 367 39 239 1.50e-12 68.2
MS.gene019838.t1 AT3G55640 26.990 289 188 6 77 347 40 323 6.73e-22 95.5
MS.gene019838.t1 AT3G55640 28.804 184 121 4 72 245 142 325 1.35e-13 71.6
MS.gene019838.t1 AT3G55640 27.103 214 128 7 169 367 39 239 1.50e-12 68.2
MS.gene019838.t1 AT5G46800 28.912 294 178 6 77 346 10 296 1.65e-21 94.0
MS.gene019838.t1 AT5G46800 28.912 294 178 6 77 346 10 296 1.65e-21 94.0
MS.gene019838.t1 AT5G46800 28.912 294 178 6 77 346 10 296 1.65e-21 94.0
MS.gene019838.t1 AT4G32400 24.549 277 192 5 77 346 116 382 1.86e-20 92.4
MS.gene019838.t1 AT4G32400 28.261 184 121 5 77 251 210 391 3.57e-12 67.8
MS.gene019838.t1 AT3G20240 26.646 319 192 10 57 350 39 340 4.74e-20 90.5
MS.gene019838.t1 AT2G33820 27.425 299 175 8 77 343 20 308 1.38e-19 89.0
MS.gene019838.t1 AT3G48850 26.590 346 203 13 23 347 26 341 2.91e-19 88.6
MS.gene019838.t1 AT2G47490 26.165 279 173 9 85 343 29 294 1.74e-18 85.5
MS.gene019838.t1 AT2G47490 27.168 173 111 5 90 248 132 303 2.03e-13 70.9
MS.gene019838.t1 AT4G01100 22.819 298 202 6 77 346 44 341 1.84e-18 85.9
MS.gene019838.t1 AT2G33820 31.522 184 106 5 77 242 20 201 8.24e-18 82.8
MS.gene019838.t1 AT5G61810 25.979 281 176 7 77 343 67 329 2.41e-17 82.4
MS.gene019838.t1 AT5G51050 25.442 283 183 7 77 346 225 492 4.98e-17 82.8
MS.gene019838.t1 AT5G61810 25.979 281 176 7 77 343 210 472 5.41e-17 82.4
MS.gene019838.t1 AT4G01100 22.436 312 200 6 77 346 44 355 6.01e-17 81.6
MS.gene019838.t1 AT5G48970 25.391 256 167 7 112 343 2 257 6.14e-16 77.4
MS.gene019838.t1 AT5G66380 25.773 291 188 8 75 343 10 294 9.43e-16 77.4
MS.gene019838.t1 AT4G01100 22.183 284 193 6 91 346 8 291 1.77e-15 76.6
MS.gene019838.t1 AT5G14040 27.397 292 173 13 57 329 63 334 1.06e-14 75.1
MS.gene019838.t1 AT4G03115 25.197 254 175 6 76 323 71 315 1.08e-14 74.7
MS.gene019838.t1 AT4G03115 28.372 215 120 8 162 361 56 251 1.52e-12 68.6
MS.gene019838.t1 AT4G03115 25.197 254 175 6 76 323 39 283 1.45e-14 74.3
MS.gene019838.t1 AT4G03115 28.372 215 120 8 162 361 24 219 1.56e-12 68.2
MS.gene019838.t1 AT5G27520 27.817 284 177 9 75 337 13 289 1.93e-14 73.9
MS.gene019838.t1 AT3G53940 28.037 214 135 4 77 272 75 287 2.44e-14 73.2
MS.gene019838.t1 AT3G53940 29.167 168 100 4 206 367 120 274 2.28e-12 67.4
MS.gene019838.t1 AT1G14560 27.044 159 109 1 202 353 65 223 3.51e-14 73.2
MS.gene019838.t1 AT1G14560 24.014 279 185 6 91 346 43 317 9.16e-14 72.0
MS.gene019838.t1 AT1G14560 27.044 159 109 1 202 353 65 223 3.82e-14 72.8
MS.gene019838.t1 AT1G14560 24.903 257 166 6 91 324 43 295 1.25e-12 68.2
MS.gene019838.t1 AT1G72820 24.483 290 165 11 79 327 40 316 3.82e-14 73.2
MS.gene019838.t1 AT1G72820 24.483 290 165 11 79 327 40 316 3.82e-14 73.2
MS.gene019838.t1 AT4G27940 22.656 384 199 11 36 331 16 389 5.19e-14 73.2
MS.gene019838.t1 AT4G26180 22.819 298 194 8 77 349 23 309 6.37e-14 72.4
MS.gene019838.t1 AT4G26180 25.123 203 143 2 160 353 13 215 1.04e-12 68.9
MS.gene019838.t1 AT5G07320 24.345 267 173 7 91 346 225 473 8.31e-14 72.8
MS.gene019838.t1 AT5G07320 26.136 176 116 4 77 242 302 473 1.42e-12 69.3
MS.gene019838.t1 AT1G25380 28.000 175 108 6 90 248 136 308 1.30e-13 71.6
MS.gene019838.t1 AT1G25380 26.502 283 169 11 85 343 33 300 1.62e-13 71.6
MS.gene019838.t1 AT1G25380 28.000 175 108 6 90 248 136 308 1.30e-13 71.6
MS.gene019838.t1 AT1G25380 26.502 283 169 11 85 343 33 300 1.62e-13 71.6
MS.gene019838.t1 AT1G14140 25.623 281 171 10 91 347 32 298 1.68e-13 70.9
MS.gene019838.t1 AT1G14140 25.654 191 120 5 172 343 20 207 3.60e-12 67.0
MS.gene019838.t1 AT5G26200 24.354 271 167 6 88 327 52 315 1.88e-13 71.2
MS.gene019838.t1 AT5G19760 27.907 172 106 3 167 331 17 177 2.49e-13 70.5
MS.gene019838.t1 AT5G64970 24.172 302 184 8 77 349 137 422 2.79e-13 71.2
MS.gene019838.t1 AT3G55640 27.103 214 128 7 169 367 39 239 2.87e-13 69.7
MS.gene019838.t1 AT3G55640 26.168 214 139 5 77 272 40 252 2.02e-12 67.0
MS.gene019838.t1 AT3G55640 27.103 214 128 7 169 367 39 239 2.87e-13 69.7
MS.gene019838.t1 AT3G55640 26.168 214 139 5 77 272 40 252 2.02e-12 67.0
MS.gene019838.t1 AT4G26180 23.810 273 172 8 77 324 23 284 4.32e-13 69.7
MS.gene019838.t1 AT4G26180 25.123 203 143 2 160 353 13 215 7.44e-13 68.9
MS.gene019838.t1 AT2G17270 25.606 289 173 11 77 347 24 288 4.46e-13 69.7
MS.gene019838.t1 AT4G03115 28.372 215 120 8 162 361 24 219 6.28e-13 68.2
MS.gene019838.t1 AT5G64970 23.588 301 185 8 78 349 14 298 6.94e-13 68.9
MS.gene019838.t1 AT4G03115 28.372 215 120 8 162 361 24 219 7.07e-13 67.8
MS.gene019838.t1 AT3G05290 26.761 284 180 9 75 337 11 287 8.24e-13 68.9
MS.gene019838.t1 AT5G09470 23.729 236 160 5 122 346 103 329 2.17e-12 67.8
MS.gene019838.t1 AT2G22500 25.397 315 179 9 74 346 5 305 1.09e-11 65.5
MS.gene019838.t1 AT2G33820 26.263 198 120 5 162 343 32 219 4.49e-11 62.8

Find 110 sgRNAs with CRISPR-Local

Find 143 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCGCCTTTGGTTTGCATTT+TGG 0.197542 6.1:-14598139 None:intergenic
GAAGCGAAGGGGTTTGAGTT+TGG 0.246107 6.1:-14597961 None:intergenic
GCCGCTATTGGCGAAGGTTT+TGG 0.255110 6.1:-14598196 None:intergenic
TTTGCAGAATGAAGGTGTTT+TGG 0.264365 6.1:+14598470 MS.gene019838:CDS
AATGAGAGATGGTTTGGTTT+TGG 0.285524 6.1:-14597901 None:intergenic
AAGCGAAGGGGTTTGAGTTT+GGG 0.298240 6.1:-14597960 None:intergenic
TTGGACCGGGGTGGTTGAAC+CGG 0.303648 6.1:-14597999 None:intergenic
GTGATTTGTGGGGCGTTGGC+GGG 0.323397 6.1:+14598627 MS.gene019838:CDS
CATTGTTATGTCTTCTTCCA+TGG 0.341911 6.1:+14597843 None:intergenic
TGTGATTTGTGGGGCGTTGG+CGG 0.357288 6.1:+14598626 MS.gene019838:CDS
GAGGAAGCAGTTGGAGGATG+TGG 0.369164 6.1:+14598914 MS.gene019838:CDS
TTCGCCAATAGCGGCATTCT+CGG 0.371473 6.1:+14598204 MS.gene019838:CDS
GTAAATTTGTGAAGCGCCTT+TGG 0.377100 6.1:-14598151 None:intergenic
GGTTATGTATGGTGGGGTTA+AGG 0.386748 6.1:+14598743 MS.gene019838:CDS
TACTTTGGTAGCTGTGAGTT+TGG 0.389241 6.1:+14598282 MS.gene019838:CDS
GCATACGAACAAAGATTGTT+TGG 0.390467 6.1:+14598590 MS.gene019838:CDS
GCAGGTGCCGGCGGAATCGC+CGG 0.396765 6.1:+14598072 MS.gene019838:CDS
ATGCGCGTTCGAAGACGGTT+AGG 0.399643 6.1:-14598041 None:intergenic
AACATCCAACGGCGTAGTTA+TGG 0.407710 6.1:-14598664 None:intergenic
GCATTCATCGGCGCAGGTGC+CGG 0.409130 6.1:+14598060 MS.gene019838:CDS
TGACTAGAGGAATGGGTCCT+AGG 0.415968 6.1:+14598808 MS.gene019838:CDS
CGGTTCAGAGTGTGATTTGT+GGG 0.419531 6.1:+14598616 MS.gene019838:CDS
TGTAAGAGAGGATGAGATGT+TGG 0.424778 6.1:-14597869 None:intergenic
TGATTTGTGGGGCGTTGGCG+GGG 0.437698 6.1:+14598628 MS.gene019838:CDS
TGGACCGGGGTGGTTGAACC+GGG 0.438661 6.1:-14597998 None:intergenic
AAATGGAATGAGAGATGGTT+TGG 0.440842 6.1:-14597907 None:intergenic
CGCTGCGTTATCAATTCCTT+CGG 0.442471 6.1:-14598399 None:intergenic
TGTTGAGGAATTTGCCTGCT+GGG 0.444165 6.1:+14598520 MS.gene019838:CDS
TCATTCCATTTCAATCTCAA+TGG 0.446328 6.1:+14597919 MS.gene019838:CDS
GAACCCGAGAATGCCGCTAT+TGG 0.454909 6.1:-14598208 None:intergenic
GGGTTCTCAGCCGTTGTTGT+CGG 0.459732 6.1:+14598237 MS.gene019838:CDS
CTTCAATCTCCGACTCAACC+CGG 0.473392 6.1:+14597980 MS.gene019838:CDS
GGATGAGATGTTGGAATCCA+TGG 0.475039 6.1:-14597860 None:intergenic
AGGCGAGGAATGAGGCGGTT+GGG 0.475712 6.1:+14598709 MS.gene019838:CDS
GAAAAGCGGTTTGGTTGGAC+CGG 0.477998 6.1:-14598013 None:intergenic
GTGGGGTTAAGGATACTGTA+AGG 0.478723 6.1:+14598754 MS.gene019838:CDS
TTGTTGAGGAATTTGCCTGC+TGG 0.480628 6.1:+14598519 MS.gene019838:CDS
TGGAGATGGAAGTGTAAGAG+AGG 0.483496 6.1:-14597881 None:intergenic
GTTGGTTTGACTAGAGGAAT+GGG 0.484116 6.1:+14598801 MS.gene019838:CDS
GGTTGGTTTGACTAGAGGAA+TGG 0.484380 6.1:+14598800 MS.gene019838:CDS
TCGCCAATAGCGGCATTCTC+GGG 0.485241 6.1:+14598205 MS.gene019838:CDS
GATTTGTGGGGCGTTGGCGG+GGG 0.487414 6.1:+14598629 MS.gene019838:CDS
TTGAAGGAAGAAGGGTGGGT+TGG 0.489069 6.1:+14598783 MS.gene019838:CDS
TGTTAAGAGGAAGCAGTTGG+AGG 0.490136 6.1:+14598908 MS.gene019838:CDS
TTGCGGAGGTTATGTATGGT+GGG 0.491320 6.1:+14598736 MS.gene019838:CDS
CCACAAATCACACTCTGAAC+CGG 0.493103 6.1:-14598615 None:intergenic
GCTTCCTCGGCTGTTTACTT+TGG 0.494304 6.1:+14598267 MS.gene019838:CDS
TGCGCGTTCGAAGACGGTTA+GGG 0.497497 6.1:-14598040 None:intergenic
GTTGCGGAGGTTATGTATGG+TGG 0.500010 6.1:+14598735 MS.gene019838:CDS
GCATTCTCGGGTTCTACAGC+GGG 0.500202 6.1:+14598217 MS.gene019838:CDS
AGCCGTTGTTGTCGGTTCGA+CGG 0.501929 6.1:+14598245 MS.gene019838:CDS
GTATGTTAAGAGGAAGCAGT+TGG 0.502406 6.1:+14598905 MS.gene019838:CDS
AAGGTTGCGGAGGTTATGTA+TGG 0.504862 6.1:+14598732 MS.gene019838:CDS
GACTAGAGGAATGGGTCCTA+GGG 0.505172 6.1:+14598809 MS.gene019838:CDS
TGAGGCCATTGAGATTGAAA+TGG 0.509539 6.1:-14597924 None:intergenic
GAGGAATGAGGCGGTTGGGA+AGG 0.510334 6.1:+14598713 MS.gene019838:CDS
TGTGTCGAGAGGATGGAGAC+AGG 0.513448 6.1:-14598109 None:intergenic
CAGGCGAGGAATGAGGCGGT+TGG 0.514856 6.1:+14598708 MS.gene019838:CDS
GTGGTTGAACCGGGTTGAGT+CGG 0.518391 6.1:-14597989 None:intergenic
GAAGGCGCCGGCGATTCCGC+CGG 0.519518 6.1:-14598079 None:intergenic
CGGATGCAGACGGGTGCGAA+GGG 0.525730 6.1:+14598420 MS.gene019838:CDS
CCGGTTCAGAGTGTGATTTG+TGG 0.525919 6.1:+14598615 MS.gene019838:CDS
GAGTGTGATTTGTGGGGCGT+TGG 0.527587 6.1:+14598623 MS.gene019838:CDS
TGAGGCGGTTGGGAAGGTTG+CGG 0.528238 6.1:+14598719 MS.gene019838:CDS
GTCTTCGAACGCGCATTCAT+CGG 0.528961 6.1:+14598048 MS.gene019838:CDS
TGTCGGTTCGACGGCTTCCT+CGG 0.529314 6.1:+14598254 MS.gene019838:CDS
GGCTTCCATAACTACGCCGT+TGG 0.535451 6.1:+14598659 MS.gene019838:CDS
GAACAAAGATTGTTTGGAGC+CGG 0.535824 6.1:+14598596 MS.gene019838:CDS
GGGTGGGTTGGTTTGACTAG+AGG 0.537595 6.1:+14598795 MS.gene019838:CDS
AAAAGCGGTTTGGTTGGACC+GGG 0.538359 6.1:-14598012 None:intergenic
GATGACGCAGGCGAGGAATG+AGG 0.540893 6.1:+14598701 MS.gene019838:CDS
GAACGCGCATTCATCGGCGC+AGG 0.552783 6.1:+14598054 MS.gene019838:CDS
GCGGATGCAGACGGGTGCGA+AGG 0.558993 6.1:+14598419 MS.gene019838:CDS
GAGAATGCCGCTATTGGCGA+AGG 0.559165 6.1:-14598202 None:intergenic
TGAGTCGGAGATTGAAGCGA+AGG 0.559736 6.1:-14597974 None:intergenic
TTCATCGGCGCAGGTGCCGG+CGG 0.569325 6.1:+14598063 MS.gene019838:CDS
TGCGGAGGTTATGTATGGTG+GGG 0.571518 6.1:+14598737 MS.gene019838:CDS
TCCAAAACCTTCGCCAATAG+CGG 0.573714 6.1:+14598195 MS.gene019838:CDS
CAAGCACTATGAAGAACCCT+AGG 0.574254 6.1:-14598825 None:intergenic
GAATAACTTATAACCCCAGC+AGG 0.578876 6.1:-14598534 None:intergenic
ATGGAGACAGGCGTAGGTGA+AGG 0.579199 6.1:-14598097 None:intergenic
GATAACGCAGCGGATGCAGA+CGG 0.581140 6.1:+14598410 MS.gene019838:CDS
GCGGTTTGGTTGGACCGGGG+TGG 0.581573 6.1:-14598008 None:intergenic
ATAACGCAGCGGATGCAGAC+GGG 0.587923 6.1:+14598411 MS.gene019838:CDS
GTCTGCGATTATGGTTCCGA+AGG 0.591943 6.1:+14598383 MS.gene019838:CDS
GATTGAAATGGAATGAGAGA+TGG 0.594874 6.1:-14597912 None:intergenic
GATGAATGCGCGTTCGAAGA+CGG 0.597527 6.1:-14598046 None:intergenic
GGCATTCTCGGGTTCTACAG+CGG 0.599446 6.1:+14598216 MS.gene019838:CDS
CGAGACTGATGACGCAGGCG+AGG 0.604725 6.1:+14598694 MS.gene019838:CDS
CTCGTCTTCACAACATCCAA+CGG 0.607204 6.1:-14598675 None:intergenic
GGCGGTTGGGAAGGTTGCGG+AGG 0.609437 6.1:+14598722 MS.gene019838:CDS
GAGAGGATGGAGACAGGCGT+AGG 0.611349 6.1:-14598103 None:intergenic
GTTGAGGAATTTGCCTGCTG+GGG 0.612034 6.1:+14598521 MS.gene019838:CDS
AAAACCAAAATGCAAACCAA+AGG 0.626274 6.1:+14598135 MS.gene019838:CDS
GAGTCGGAGATTGAAGCGAA+GGG 0.627888 6.1:-14597973 None:intergenic
AAAGCGGTTTGGTTGGACCG+GGG 0.628596 6.1:-14598011 None:intergenic
TTTGATTCCTCCGATTTCGG+GGG 0.629905 6.1:+14598341 MS.gene019838:CDS
TTGGGTTAGTGAGAGTGATG+AGG 0.646034 6.1:-14597942 None:intergenic
GGTACTCAGCTACATTGTTG+AGG 0.647888 6.1:+14598505 MS.gene019838:CDS
GGTTCAGAGTGTGATTTGTG+GGG 0.649669 6.1:+14598617 MS.gene019838:CDS
AGTCGGAGATTGAAGCGAAG+GGG 0.651168 6.1:-14597972 None:intergenic
ACAGGCGTAGGTGAAGGCGC+CGG 0.656656 6.1:-14598091 None:intergenic
GGATGCAGACGGGTGCGAAG+GGG 0.664448 6.1:+14598421 MS.gene019838:CDS
TGGGGTTAAGGATACTGTAA+GGG 0.664936 6.1:+14598755 MS.gene019838:CDS
GACGCAGGCGAGGAATGAGG+CGG 0.666166 6.1:+14598704 MS.gene019838:CDS
TCAACCCGGTTCAACCACCC+CGG 0.679912 6.1:+14597994 MS.gene019838:CDS
AGCCGTCGAACCGACAACAA+CGG 0.680601 6.1:-14598247 None:intergenic
GCTACCAAAGTAAACAGCCG+AGG 0.698505 6.1:-14598271 None:intergenic
GAAGACGAGACTGATGACGC+AGG 0.724323 6.1:+14598689 MS.gene019838:CDS
CGAAGGAATTGATAACGCAG+CGG 0.736123 6.1:+14598400 MS.gene019838:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAGATTTTGCAGAATGA+AGG + chr6.1:14598462-14598481 MS.gene019838:CDS 25.0%
!! TTTTGAATGAGTATGTTAAG+AGG + chr6.1:14598895-14598914 MS.gene019838:CDS 25.0%
AAAACCAAAATGCAAACCAA+AGG + chr6.1:14598135-14598154 MS.gene019838:CDS 30.0%
TCATTCCATTTCAATCTCAA+TGG + chr6.1:14597919-14597938 MS.gene019838:CDS 30.0%
!! TCTTCATAGTGCTTGTTTTT+CGG + chr6.1:14598833-14598852 MS.gene019838:CDS 30.0%
!!! GTAAGTCATTTTTGTCGAAA+CGG + chr6.1:14598304-14598323 MS.gene019838:CDS 30.0%
AAATGGAATGAGAGATGGTT+TGG - chr6.1:14597910-14597929 None:intergenic 35.0%
AATCGGAGGAATCAAAAACT+TGG - chr6.1:14598337-14598356 None:intergenic 35.0%
ATCGGAGGAATCAAAAACTT+GGG - chr6.1:14598336-14598355 None:intergenic 35.0%
GATTGAAATGGAATGAGAGA+TGG - chr6.1:14597915-14597934 None:intergenic 35.0%
GCATACGAACAAAGATTGTT+TGG + chr6.1:14598590-14598609 MS.gene019838:CDS 35.0%
! TACTGTAAGGGAGATTTTGA+AGG + chr6.1:14598767-14598786 MS.gene019838:CDS 35.0%
!! GTTTTTGATTCCTCCGATTT+CGG + chr6.1:14598338-14598357 MS.gene019838:CDS 35.0%
!! TTTTTGATTCCTCCGATTTC+GGG + chr6.1:14598339-14598358 MS.gene019838:CDS 35.0%
!!! AATGAGAGATGGTTTGGTTT+TGG - chr6.1:14597904-14597923 None:intergenic 35.0%
!!! GTGTTTTGGGTTTGTATAGA+GGG + chr6.1:14598484-14598503 MS.gene019838:CDS 35.0%
!!! TTGCAGAATGAAGGTGTTTT+GGG + chr6.1:14598471-14598490 MS.gene019838:CDS 35.0%
!!! TTTGCAGAATGAAGGTGTTT+TGG + chr6.1:14598470-14598489 MS.gene019838:CDS 35.0%
GAATAACTTATAACCCCAGC+AGG - chr6.1:14598537-14598556 None:intergenic 40.0%
GTATGTTAAGAGGAAGCAGT+TGG + chr6.1:14598905-14598924 MS.gene019838:CDS 40.0%
TGAGGCCATTGAGATTGAAA+TGG - chr6.1:14597927-14597946 None:intergenic 40.0%
TGGGGTTAAGGATACTGTAA+GGG + chr6.1:14598755-14598774 MS.gene019838:CDS 40.0%
TGTAAGAGAGGATGAGATGT+TGG - chr6.1:14597872-14597891 None:intergenic 40.0%
! GAACAAAGATTGTTTGGAGC+CGG + chr6.1:14598596-14598615 MS.gene019838:CDS 40.0%
! GTAAATTTGTGAAGCGCCTT+TGG - chr6.1:14598154-14598173 None:intergenic 40.0%
! TACTTTGGTAGCTGTGAGTT+TGG + chr6.1:14598282-14598301 MS.gene019838:CDS 40.0%
! TGTTTTGTCGTCTGCGATTA+TGG + chr6.1:14598374-14598393 MS.gene019838:CDS 40.0%
!! AGATTTTGAAGGAAGAAGGG+TGG + chr6.1:14598778-14598797 MS.gene019838:CDS 40.0%
!! AGGGAGATTTTGAAGGAAGA+AGG + chr6.1:14598774-14598793 MS.gene019838:CDS 40.0%
!! AGTGCTTGTTTTTCGGCTTT+GGG + chr6.1:14598840-14598859 MS.gene019838:CDS 40.0%
!! GATTTTGAAGGAAGAAGGGT+GGG + chr6.1:14598779-14598798 MS.gene019838:CDS 40.0%
!! GGGAGATTTTGAAGGAAGAA+GGG + chr6.1:14598775-14598794 MS.gene019838:CDS 40.0%
!! GTTGGTTTGACTAGAGGAAT+GGG + chr6.1:14598801-14598820 MS.gene019838:CDS 40.0%
!! TAGTGCTTGTTTTTCGGCTT+TGG + chr6.1:14598839-14598858 MS.gene019838:CDS 40.0%
!! TTTTGATTCCTCCGATTTCG+GGG + chr6.1:14598340-14598359 MS.gene019838:CDS 40.0%
!! TTTTGATTGTGTCGAGAGGA+TGG - chr6.1:14598119-14598138 None:intergenic 40.0%
!!! ACGGTTAGGGTTTTGAAAAG+CGG - chr6.1:14598030-14598049 None:intergenic 40.0%
!!! AGATGGTTTGGTTTTGGAGA+TGG - chr6.1:14597898-14597917 None:intergenic 40.0%
!!! GGTGTTTTGGGTTTGTATAG+AGG + chr6.1:14598483-14598502 MS.gene019838:CDS 40.0%
!!! GTTTTGAAAAGCGGTTTGGT+TGG - chr6.1:14598021-14598040 None:intergenic 40.0%
!!! TAGGGTTTTGAAAAGCGGTT+TGG - chr6.1:14598025-14598044 None:intergenic 40.0%
!!! TTGGTTTTGATTGTGTCGAG+AGG - chr6.1:14598123-14598142 None:intergenic 40.0%
AACATCCAACGGCGTAGTTA+TGG - chr6.1:14598667-14598686 None:intergenic 45.0%
AAGGTTGCGGAGGTTATGTA+TGG + chr6.1:14598732-14598751 MS.gene019838:CDS 45.0%
CAAGCACTATGAAGAACCCT+AGG - chr6.1:14598828-14598847 None:intergenic 45.0%
CCACAAATCACACTCTGAAC+CGG - chr6.1:14598618-14598637 None:intergenic 45.0%
CGCTGCGTTATCAATTCCTT+CGG - chr6.1:14598402-14598421 None:intergenic 45.0%
CTCGTCTTCACAACATCCAA+CGG - chr6.1:14598678-14598697 None:intergenic 45.0%
GGATGAGATGTTGGAATCCA+TGG - chr6.1:14597863-14597882 None:intergenic 45.0%
GGTACTCAGCTACATTGTTG+AGG + chr6.1:14598505-14598524 MS.gene019838:CDS 45.0%
GTGGGGTTAAGGATACTGTA+AGG + chr6.1:14598754-14598773 MS.gene019838:CDS 45.0%
TCCAAAACCTTCGCCAATAG+CGG + chr6.1:14598195-14598214 MS.gene019838:CDS 45.0%
TGTTAAGAGGAAGCAGTTGG+AGG + chr6.1:14598908-14598927 MS.gene019838:CDS 45.0%
TGTTGAGGAATTTGCCTGCT+GGG + chr6.1:14598520-14598539 MS.gene019838:CDS 45.0%
TTGCGGAGGTTATGTATGGT+GGG + chr6.1:14598736-14598755 MS.gene019838:CDS 45.0%
TTGTTGAGGAATTTGCCTGC+TGG + chr6.1:14598519-14598538 MS.gene019838:CDS 45.0%
TTTGATTCCTCCGATTTCGG+GGG + chr6.1:14598341-14598360 MS.gene019838:CDS 45.0%
! AAGCGAAGGGGTTTGAGTTT+GGG - chr6.1:14597963-14597982 None:intergenic 45.0%
! CGGTTCAGAGTGTGATTTGT+GGG + chr6.1:14598616-14598635 MS.gene019838:CDS 45.0%
! GGTTATGTATGGTGGGGTTA+AGG + chr6.1:14598743-14598762 MS.gene019838:CDS 45.0%
! GGTTCAGAGTGTGATTTGTG+GGG + chr6.1:14598617-14598636 MS.gene019838:CDS 45.0%
! TGGAGATGGAAGTGTAAGAG+AGG - chr6.1:14597884-14597903 None:intergenic 45.0%
!! CGAAGGAATTGATAACGCAG+CGG + chr6.1:14598400-14598419 MS.gene019838:CDS 45.0%
!! GGTTGGTTTGACTAGAGGAA+TGG + chr6.1:14598800-14598819 MS.gene019838:CDS 45.0%
!! TTGGGTTAGTGAGAGTGATG+AGG - chr6.1:14597945-14597964 None:intergenic 45.0%
!!! AGCGCCTTTGGTTTGCATTT+TGG - chr6.1:14598142-14598161 None:intergenic 45.0%
AGTCGGAGATTGAAGCGAAG+GGG - chr6.1:14597975-14597994 None:intergenic 50.0%
CCGGTTCAGAGTGTGATTTG+TGG + chr6.1:14598615-14598634 MS.gene019838:CDS 50.0%
CTTCAATCTCCGACTCAACC+CGG + chr6.1:14597980-14597999 MS.gene019838:CDS 50.0%
GACTAGAGGAATGGGTCCTA+GGG + chr6.1:14598809-14598828 MS.gene019838:CDS 50.0%
GAGTCGGAGATTGAAGCGAA+GGG - chr6.1:14597976-14597995 None:intergenic 50.0%
GATGAATGCGCGTTCGAAGA+CGG - chr6.1:14598049-14598068 None:intergenic 50.0%
GCTACCAAAGTAAACAGCCG+AGG - chr6.1:14598274-14598293 None:intergenic 50.0%
GCTTCCTCGGCTGTTTACTT+TGG + chr6.1:14598267-14598286 MS.gene019838:CDS 50.0%
GTCTGCGATTATGGTTCCGA+AGG + chr6.1:14598383-14598402 MS.gene019838:CDS 50.0%
GTCTTCGAACGCGCATTCAT+CGG + chr6.1:14598048-14598067 MS.gene019838:CDS 50.0%
GTTGAGGAATTTGCCTGCTG+GGG + chr6.1:14598521-14598540 MS.gene019838:CDS 50.0%
GTTGCGGAGGTTATGTATGG+TGG + chr6.1:14598735-14598754 MS.gene019838:CDS 50.0%
TGACTAGAGGAATGGGTCCT+AGG + chr6.1:14598808-14598827 MS.gene019838:CDS 50.0%
TGAGTCGGAGATTGAAGCGA+AGG - chr6.1:14597977-14597996 None:intergenic 50.0%
TGCGGAGGTTATGTATGGTG+GGG + chr6.1:14598737-14598756 MS.gene019838:CDS 50.0%
TTCGCCAATAGCGGCATTCT+CGG + chr6.1:14598204-14598223 MS.gene019838:CDS 50.0%
TTGAAGGAAGAAGGGTGGGT+TGG + chr6.1:14598783-14598802 MS.gene019838:CDS 50.0%
! GAAGCGAAGGGGTTTGAGTT+TGG - chr6.1:14597964-14597983 None:intergenic 50.0%
!! AAAAGCGGTTTGGTTGGACC+GGG - chr6.1:14598015-14598034 None:intergenic 50.0%
!! GAAAAGCGGTTTGGTTGGAC+CGG - chr6.1:14598016-14598035 None:intergenic 50.0%
!!! AGGTTTTGGAAACTGCGTCG+AGG - chr6.1:14598185-14598204 None:intergenic 50.0%
!!! GGTTTTGGAAACTGCGTCGA+GGG - chr6.1:14598184-14598203 None:intergenic 50.0%
AGCCGTCGAACCGACAACAA+CGG - chr6.1:14598250-14598269 None:intergenic 55.0%
ATAACGCAGCGGATGCAGAC+GGG + chr6.1:14598411-14598430 MS.gene019838:CDS 55.0%
ATGCGCGTTCGAAGACGGTT+AGG - chr6.1:14598044-14598063 None:intergenic 55.0%
ATGGAGACAGGCGTAGGTGA+AGG - chr6.1:14598100-14598119 None:intergenic 55.0%
GAACCCGAGAATGCCGCTAT+TGG - chr6.1:14598211-14598230 None:intergenic 55.0%
GAGAATGCCGCTATTGGCGA+AGG - chr6.1:14598205-14598224 None:intergenic 55.0%
GAGGAAGCAGTTGGAGGATG+TGG + chr6.1:14598914-14598933 MS.gene019838:CDS 55.0%
GATAACGCAGCGGATGCAGA+CGG + chr6.1:14598410-14598429 MS.gene019838:CDS 55.0%
GCATTCTCGGGTTCTACAGC+GGG + chr6.1:14598217-14598236 MS.gene019838:CDS 55.0%
GGCATTCTCGGGTTCTACAG+CGG + chr6.1:14598216-14598235 MS.gene019838:CDS 55.0%
GGCTTCCATAACTACGCCGT+TGG + chr6.1:14598659-14598678 MS.gene019838:CDS 55.0%
GGGTTCTCAGCCGTTGTTGT+CGG + chr6.1:14598237-14598256 MS.gene019838:CDS 55.0%
TCGCCAATAGCGGCATTCTC+GGG + chr6.1:14598205-14598224 MS.gene019838:CDS 55.0%
TGCGCGTTCGAAGACGGTTA+GGG - chr6.1:14598043-14598062 None:intergenic 55.0%
TGTGTCGAGAGGATGGAGAC+AGG - chr6.1:14598112-14598131 None:intergenic 55.0%
! GAAGACGAGACTGATGACGC+AGG + chr6.1:14598689-14598708 MS.gene019838:CDS 55.0%
! GAGTGTGATTTGTGGGGCGT+TGG + chr6.1:14598623-14598642 MS.gene019838:CDS 55.0%
! GCCGCTATTGGCGAAGGTTT+TGG - chr6.1:14598199-14598218 None:intergenic 55.0%
! GTGGTTGAACCGGGTTGAGT+CGG - chr6.1:14597992-14598011 None:intergenic 55.0%
!! AAAGCGGTTTGGTTGGACCG+GGG - chr6.1:14598014-14598033 None:intergenic 55.0%
!! AGCCGTTGTTGTCGGTTCGA+CGG + chr6.1:14598245-14598264 MS.gene019838:CDS 55.0%
!! GGGTGGGTTGGTTTGACTAG+AGG + chr6.1:14598795-14598814 MS.gene019838:CDS 55.0%
!! TGTGATTTGTGGGGCGTTGG+CGG + chr6.1:14598626-14598645 MS.gene019838:CDS 55.0%
AGGCGAGGAATGAGGCGGTT+GGG + chr6.1:14598709-14598728 MS.gene019838:CDS 60.0%
GAGAGGATGGAGACAGGCGT+AGG - chr6.1:14598106-14598125 None:intergenic 60.0%
GAGGAATGAGGCGGTTGGGA+AGG + chr6.1:14598713-14598732 MS.gene019838:CDS 60.0%
GATGACGCAGGCGAGGAATG+AGG + chr6.1:14598701-14598720 MS.gene019838:CDS 60.0%
TCAACCCGGTTCAACCACCC+CGG + chr6.1:14597994-14598013 MS.gene019838:CDS 60.0%
TGAGGCGGTTGGGAAGGTTG+CGG + chr6.1:14598719-14598738 MS.gene019838:CDS 60.0%
TTCCCCAACGCCCCCGAAAT+CGG - chr6.1:14598354-14598373 None:intergenic 60.0%
TTGGACCGGGGTGGTTGAAC+CGG - chr6.1:14598002-14598021 None:intergenic 60.0%
!! GTGATTTGTGGGGCGTTGGC+GGG + chr6.1:14598627-14598646 MS.gene019838:CDS 60.0%
!! TGATTTGTGGGGCGTTGGCG+GGG + chr6.1:14598628-14598647 MS.gene019838:CDS 60.0%
!! TGTCGGTTCGACGGCTTCCT+CGG + chr6.1:14598254-14598273 MS.gene019838:CDS 60.0%
CAGGCGAGGAATGAGGCGGT+TGG + chr6.1:14598708-14598727 MS.gene019838:CDS 65.0%
CGGATGCAGACGGGTGCGAA+GGG + chr6.1:14598420-14598439 MS.gene019838:CDS 65.0%
GAACGCGCATTCATCGGCGC+AGG + chr6.1:14598054-14598073 MS.gene019838:CDS 65.0%
GACGCAGGCGAGGAATGAGG+CGG + chr6.1:14598704-14598723 MS.gene019838:CDS 65.0%
GCATTCATCGGCGCAGGTGC+CGG + chr6.1:14598060-14598079 MS.gene019838:CDS 65.0%
GGATGCAGACGGGTGCGAAG+GGG + chr6.1:14598421-14598440 MS.gene019838:CDS 65.0%
TGGACCGGGGTGGTTGAACC+GGG - chr6.1:14598001-14598020 None:intergenic 65.0%
! ACAGGCGTAGGTGAAGGCGC+CGG - chr6.1:14598094-14598113 None:intergenic 65.0%
! CGAGACTGATGACGCAGGCG+AGG + chr6.1:14598694-14598713 MS.gene019838:CDS 65.0%
! TCCTCCGATTTCGGGGGCGT+TGG + chr6.1:14598347-14598366 MS.gene019838:CDS 65.0%
!! CCTCCGATTTCGGGGGCGTT+GGG + chr6.1:14598348-14598367 MS.gene019838:CDS 65.0%
!! CTCCGATTTCGGGGGCGTTG+GGG + chr6.1:14598349-14598368 MS.gene019838:CDS 65.0%
!! GATTTGTGGGGCGTTGGCGG+GGG + chr6.1:14598629-14598648 MS.gene019838:CDS 65.0%
CCCAACGCCCCCGAAATCGG+AGG - chr6.1:14598351-14598370 None:intergenic 70.0%
GCGGATGCAGACGGGTGCGA+AGG + chr6.1:14598419-14598438 MS.gene019838:CDS 70.0%
GGCGGTTGGGAAGGTTGCGG+AGG + chr6.1:14598722-14598741 MS.gene019838:CDS 70.0%
!! GCGGTTTGGTTGGACCGGGG+TGG - chr6.1:14598011-14598030 None:intergenic 70.0%
!! GGCGTTGGCGGGGGCGATAT+CGG + chr6.1:14598638-14598657 MS.gene019838:CDS 70.0%
!! TTCATCGGCGCAGGTGCCGG+CGG + chr6.1:14598063-14598082 MS.gene019838:CDS 70.0%
!! GAAGGCGCCGGCGATTCCGC+CGG - chr6.1:14598082-14598101 None:intergenic 75.0%
!! GCAGGTGCCGGCGGAATCGC+CGG + chr6.1:14598072-14598091 MS.gene019838:CDS 75.0%


Chromosome Type Strat End Strand Name
chr6.1 gene 14597850 14598962 14597850 ID=MS.gene019838
chr6.1 mRNA 14597850 14598962 14597850 ID=MS.gene019838.t1;Parent=MS.gene019838
chr6.1 exon 14597850 14598962 14597850 ID=MS.gene019838.t1.exon1;Parent=MS.gene019838.t1
chr6.1 CDS 14597850 14598962 14597850 ID=cds.MS.gene019838.t1;Parent=MS.gene019838.t1
Gene Sequence

>MS.gene019838

ATGTCTTCTTCCATGGATTCCAACATCTCATCCTCTCTTACACTTCCATCTCCAAAACCAAACCATCTCTCATTCCATTTCAATCTCAATGGCCTCATCACTCTCACTAACCCAAACTCAAACCCCTTCGCTTCAATCTCCGACTCAACCCGGTTCAACCACCCCGGTCCAACCAAACCGCTTTTCAAAACCCTAACCGTCTTCGAACGCGCATTCATCGGCGCAGGTGCCGGCGGAATCGCCGGCGCCTTCACCTACGCCTGTCTCCATCCTCTCGACACAATCAAAACCAAAATGCAAACCAAAGGCGCTTCACAAATTTACAAAAATACCCTCGACGCAGTTTCCAAAACCTTCGCCAATAGCGGCATTCTCGGGTTCTACAGCGGGTTCTCAGCCGTTGTTGTCGGTTCGACGGCTTCCTCGGCTGTTTACTTTGGTAGCTGTGAGTTTGGTAAGTCATTTTTGTCGAAACGGAGTTGTCCCAAGTTTTTGATTCCTCCGATTTCGGGGGCGTTGGGGAATGTTTTGTCGTCTGCGATTATGGTTCCGAAGGAATTGATAACGCAGCGGATGCAGACGGGTGCGAAGGGGAGATCGTACGAAGTTTTGATTAAGATTTTGCAGAATGAAGGTGTTTTGGGTTTGTATAGAGGGTACTCAGCTACATTGTTGAGGAATTTGCCTGCTGGGGTTATAAGTTATTCGTCGTTTGAGTATTTGAAGTTAGCGTTTATGAAGCATACGAACAAAGATTGTTTGGAGCCGGTTCAGAGTGTGATTTGTGGGGCGTTGGCGGGGGCGATATCGGCTTCCATAACTACGCCGTTGGATGTTGTGAAGACGAGACTGATGACGCAGGCGAGGAATGAGGCGGTTGGGAAGGTTGCGGAGGTTATGTATGGTGGGGTTAAGGATACTGTAAGGGAGATTTTGAAGGAAGAAGGGTGGGTTGGTTTGACTAGAGGAATGGGTCCTAGGGTTCTTCATAGTGCTTGTTTTTCGGCTTTGGGTTATTTTGCGTTTGAAACTGCTAGAGTTGCTATTTTGAATGAGTATGTTAAGAGGAAGCAGTTGGAGGATGTGGATGTTGTTGTTTCTAGTAGTAGTTGA
Protein sequence

>MS.gene019838.t1

MSSSMDSNISSSLTLPSPKPNHLSFHFNLNGLITLTNPNSNPFASISDSTRFNHPGPTKPLFKTLTVFERAFIGAGAGGIAGAFTYACLHPLDTIKTKMQTKGASQIYKNTLDAVSKTFANSGILGFYSGFSAVVVGSTASSAVYFGSCEFGKSFLSKRSCPKFLIPPISGALGNVLSSAIMVPKELITQRMQTGAKGRSYEVLIKILQNEGVLGLYRGYSATLLRNLPAGVISYSSFEYLKLAFMKHTNKDCLEPVQSVICGALAGAISASITTPLDVVKTRLMTQARNEAVGKVAEVMYGGVKDTVREILKEEGWVGLTRGMGPRVLHSACFSALGYFAFETARVAILNEYVKRKQLEDVDVVVSSSS