Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022057.t1 | XP_013447726.1 | 99.4 | 715 | 4 | 0 | 1 | 715 | 1 | 715 | 0.00E+00 | 1132.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022057.t1 | Q9M1H3 | 74.2 | 724 | 177 | 3 | 1 | 715 | 1 | 723 | 9.6e-276 | 950.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022057.t1 | A0A072TXB0 | 99.4 | 715 | 4 | 0 | 1 | 715 | 1 | 715 | 0.0e+00 | 1132.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene022057 | MS.gene028666 | PPI |
MS.gene022057 | MS.gene40858 | PPI |
MS.gene022057 | MS.gene98065 | PPI |
MS.gene022057 | MS.gene69745 | PPI |
MS.gene022057 | MS.gene31234 | PPI |
MS.gene25771 | MS.gene022057 | PPI |
MS.gene022057 | MS.gene70530 | PPI |
MS.gene022057 | MS.gene044268 | PPI |
MS.gene022057 | MS.gene054719 | PPI |
MS.gene022057 | MS.gene050086 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022057.t1 | MTR_7g018380 | 99.441 | 715 | 4 | 0 | 1 | 715 | 1 | 715 | 0.0 | 1448 |
MS.gene022057.t1 | MTR_8g075040 | 98.322 | 715 | 10 | 1 | 1 | 715 | 54 | 766 | 0.0 | 1428 |
MS.gene022057.t1 | MTR_1g066620 | 91.622 | 561 | 45 | 2 | 156 | 715 | 2 | 561 | 0.0 | 1058 |
MS.gene022057.t1 | MTR_3g080970 | 40.416 | 673 | 351 | 16 | 41 | 702 | 74 | 707 | 1.72e-155 | 468 |
MS.gene022057.t1 | MTR_2g095440 | 41.561 | 551 | 289 | 7 | 152 | 702 | 62 | 579 | 3.92e-150 | 449 |
MS.gene022057.t1 | MTR_2g095440 | 41.348 | 549 | 289 | 7 | 154 | 702 | 4 | 519 | 3.68e-149 | 445 |
MS.gene022057.t1 | MTR_2g095440 | 41.499 | 547 | 287 | 7 | 156 | 702 | 12 | 525 | 5.26e-149 | 444 |
MS.gene022057.t1 | MTR_4g057795 | 41.155 | 554 | 293 | 6 | 152 | 705 | 62 | 582 | 2.01e-146 | 440 |
MS.gene022057.t1 | MTR_4g057795 | 41.270 | 504 | 263 | 7 | 202 | 705 | 2 | 472 | 7.94e-130 | 393 |
MS.gene022057.t1 | MTR_3g095010 | 29.392 | 592 | 367 | 14 | 144 | 715 | 96 | 656 | 7.94e-62 | 220 |
MS.gene022057.t1 | MTR_7g102070 | 28.814 | 236 | 127 | 8 | 482 | 691 | 420 | 640 | 1.48e-13 | 75.1 |
MS.gene022057.t1 | MTR_1g063170 | 30.332 | 211 | 112 | 7 | 482 | 666 | 393 | 594 | 1.62e-13 | 75.1 |
MS.gene022057.t1 | MTR_4g124050 | 29.237 | 236 | 105 | 9 | 493 | 691 | 1055 | 1265 | 1.79e-13 | 74.7 |
MS.gene022057.t1 | MTR_3g107800 | 29.046 | 241 | 109 | 9 | 488 | 691 | 1026 | 1241 | 5.79e-13 | 73.2 |
MS.gene022057.t1 | MTR_5g029750 | 27.632 | 228 | 128 | 9 | 488 | 691 | 989 | 1203 | 1.32e-12 | 72.0 |
MS.gene022057.t1 | MTR_8g022270 | 27.232 | 224 | 134 | 7 | 488 | 691 | 598 | 812 | 1.64e-12 | 71.6 |
MS.gene022057.t1 | MTR_6g011680 | 31.441 | 229 | 118 | 10 | 488 | 691 | 1008 | 1222 | 1.99e-12 | 71.2 |
MS.gene022057.t1 | MTR_3g093430 | 30.213 | 235 | 113 | 9 | 488 | 691 | 364 | 578 | 2.15e-11 | 68.2 |
MS.gene022057.t1 | MTR_7g079540 | 36.646 | 161 | 78 | 6 | 505 | 643 | 101 | 259 | 2.80e-11 | 65.9 |
MS.gene022057.t1 | MTR_7g079540 | 36.646 | 161 | 78 | 6 | 505 | 643 | 101 | 259 | 4.34e-11 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022057.t1 | AT3G54540 | 78.680 | 727 | 139 | 6 | 1 | 715 | 1 | 723 | 0.0 | 1140 |
MS.gene022057.t1 | AT3G54540 | 78.680 | 727 | 139 | 6 | 1 | 715 | 1 | 723 | 0.0 | 1140 |
MS.gene022057.t1 | AT1G64550 | 39.611 | 669 | 343 | 14 | 52 | 702 | 83 | 708 | 6.18e-155 | 466 |
MS.gene022057.t1 | AT5G60790 | 41.622 | 555 | 289 | 7 | 152 | 705 | 67 | 587 | 2.03e-147 | 442 |
MS.gene022057.t1 | AT5G64840 | 29.649 | 570 | 358 | 11 | 145 | 701 | 89 | 628 | 1.90e-65 | 230 |
MS.gene022057.t1 | AT5G09930 | 30.648 | 571 | 353 | 14 | 144 | 701 | 74 | 614 | 1.05e-62 | 222 |
MS.gene022057.t1 | AT3G28390 | 31.718 | 227 | 112 | 10 | 493 | 691 | 985 | 1196 | 1.06e-13 | 75.5 |
MS.gene022057.t1 | AT3G28345 | 30.734 | 218 | 125 | 8 | 481 | 676 | 988 | 1201 | 3.08e-13 | 73.9 |
MS.gene022057.t1 | AT2G36910 | 30.097 | 206 | 109 | 7 | 487 | 666 | 367 | 563 | 4.39e-13 | 73.6 |
MS.gene022057.t1 | AT2G47000 | 29.344 | 259 | 117 | 10 | 488 | 710 | 1042 | 1270 | 5.19e-12 | 70.1 |
MS.gene022057.t1 | AT2G47000 | 29.344 | 259 | 117 | 10 | 488 | 710 | 1042 | 1270 | 5.19e-12 | 70.1 |
MS.gene022057.t1 | AT2G47000 | 29.344 | 259 | 117 | 10 | 488 | 710 | 1042 | 1270 | 5.19e-12 | 70.1 |
MS.gene022057.t1 | AT1G67940 | 31.754 | 211 | 102 | 9 | 165 | 366 | 41 | 218 | 1.09e-11 | 66.2 |
MS.gene022057.t1 | AT3G28860 | 31.222 | 221 | 121 | 9 | 492 | 691 | 1014 | 1224 | 1.82e-11 | 68.6 |
MS.gene022057.t1 | AT3G28860 | 28.390 | 236 | 108 | 9 | 492 | 691 | 369 | 579 | 3.73e-11 | 67.4 |
MS.gene022057.t1 | AT3G62150 | 27.917 | 240 | 113 | 9 | 488 | 691 | 1052 | 1267 | 1.99e-11 | 68.2 |
MS.gene022057.t1 | AT3G62150 | 27.917 | 240 | 113 | 9 | 488 | 691 | 1052 | 1267 | 1.99e-11 | 68.2 |
MS.gene022057.t1 | AT3G62150 | 27.917 | 240 | 113 | 9 | 488 | 691 | 1052 | 1267 | 1.99e-11 | 68.2 |
MS.gene022057.t1 | AT1G70610 | 30.337 | 178 | 100 | 5 | 488 | 646 | 274 | 446 | 2.03e-11 | 67.4 |
MS.gene022057.t1 | AT1G70610 | 31.792 | 173 | 104 | 4 | 488 | 646 | 455 | 627 | 2.09e-11 | 67.8 |
MS.gene022057.t1 | AT4G01830 | 28.444 | 225 | 132 | 8 | 488 | 691 | 751 | 967 | 2.22e-11 | 68.2 |
MS.gene022057.t1 | AT1G10680 | 26.754 | 228 | 130 | 9 | 488 | 691 | 982 | 1196 | 2.92e-11 | 67.8 |
MS.gene022057.t1 | AT4G25960 | 28.431 | 204 | 113 | 8 | 488 | 666 | 1030 | 1225 | 3.11e-11 | 67.8 |
MS.gene022057.t1 | AT4G01830 | 28.444 | 225 | 132 | 8 | 488 | 691 | 985 | 1201 | 4.11e-11 | 67.4 |
MS.gene022057.t1 | AT3G28380 | 28.571 | 217 | 117 | 8 | 488 | 676 | 995 | 1201 | 4.19e-11 | 67.0 |
MS.gene022057.t1 | AT1G65410 | 27.723 | 202 | 104 | 5 | 166 | 354 | 97 | 269 | 4.39e-11 | 65.5 |
MS.gene022057.t1 | AT4G18050 | 28.070 | 228 | 118 | 8 | 493 | 691 | 998 | 1208 | 5.41e-11 | 67.0 |
MS.gene022057.t1 | AT4G18050 | 28.070 | 228 | 118 | 8 | 493 | 691 | 1008 | 1218 | 6.11e-11 | 66.6 |
Find 165 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGTGCAAAACTTGGTAAATA+TGG | 0.195660 | 7.1:+78443344 | MS.gene022057:CDS |
TGTTGATGTTGGTATTGATA+TGG | 0.277196 | 7.1:+78443091 | MS.gene022057:CDS |
AGGCAAAGAAAGAAGCTCTT+AGG | 0.283965 | 7.1:+78441920 | MS.gene022057:CDS |
ATGAAGAACGGAGTCAAATA+TGG | 0.285206 | 7.1:+78443600 | MS.gene022057:CDS |
GAAGCTTTCGGAGCAGGTTT+TGG | 0.296468 | 7.1:-78441730 | None:intergenic |
AAAAGCTGATAAGCCTAAAA+AGG | 0.327285 | 7.1:+78441687 | MS.gene022057:CDS |
ACTTGTGTGGTACCTCTACT+TGG | 0.330518 | 7.1:-78442950 | None:intergenic |
AGCTGCCCATGTGGCTGAAC+AGG | 0.335346 | 7.1:+78441900 | MS.gene022057:CDS |
TAAGAATATTGATGTCCTTC+TGG | 0.338734 | 7.1:+78442191 | MS.gene022057:CDS |
GTCTAAAATCCTCTCGGTTT+GGG | 0.344431 | 7.1:-78443061 | None:intergenic |
CCTGGTTTAGCCTTTGTAGA+TGG | 0.353411 | 7.1:-78441601 | None:intergenic |
GGAAAACGGTATGGTTTGAT+TGG | 0.355040 | 7.1:+78442105 | MS.gene022057:CDS |
ATCTTGTTGAGCCTTGTTCC+CGG | 0.359673 | 7.1:-78442841 | None:intergenic |
GTTGCCATTGTTGGGCCTAA+TGG | 0.366354 | 7.1:+78443122 | MS.gene022057:CDS |
GTTGATGTTGGTATTGATAT+GGG | 0.367817 | 7.1:+78443092 | MS.gene022057:CDS |
CTCTGCCATGTTGGCAGGTA+TGG | 0.372673 | 7.1:+78441660 | MS.gene022057:CDS |
GAATCTTCTAGCTGGTGATT+TGG | 0.379502 | 7.1:+78443166 | MS.gene022057:CDS |
TTGTAATCCTCAAATGTTCC+AGG | 0.380069 | 7.1:-78443653 | None:intergenic |
TTGAAAGCAGCTAGAAGAAC+CGG | 0.393435 | 7.1:+78442822 | MS.gene022057:CDS |
GGGACTCGTGTTGCCATTGT+TGG | 0.395294 | 7.1:+78443113 | MS.gene022057:CDS |
TGCATATCCAAATGATTTGT+GGG | 0.395419 | 7.1:-78443482 | None:intergenic |
AGATGAACCCACAAATCATT+TGG | 0.396989 | 7.1:+78443475 | MS.gene022057:CDS |
GAGGGCTGTTCTGTGGTTAG+AGG | 0.402715 | 7.1:+78442602 | MS.gene022057:CDS |
CACTATTGAAGCTTCTTGCT+TGG | 0.403215 | 7.1:+78442151 | MS.gene022057:CDS |
CACCTCAAGTGGCTTCAAAT+CGG | 0.406400 | 7.1:-78441830 | None:intergenic |
GATCTACAAAATGCAGCTTC+TGG | 0.417738 | 7.1:+78442306 | MS.gene022057:CDS |
CTTCGAACTTCACCTTCACT+TGG | 0.420634 | 7.1:-78443191 | None:intergenic |
TTACTAAGCCCCTCCTGGTC+TGG | 0.421538 | 7.1:-78443308 | None:intergenic |
TCCGTCTCTGCCATGTTGGC+AGG | 0.421555 | 7.1:+78441655 | MS.gene022057:CDS |
TCTTTGCCTGTTCAGCCACA+TGG | 0.423166 | 7.1:-78441906 | None:intergenic |
ACCTCAAGTGGCTTCAAATC+GGG | 0.424766 | 7.1:-78441829 | None:intergenic |
AGTCTAAAATCCTCTCGGTT+TGG | 0.427353 | 7.1:-78443062 | None:intergenic |
GAGATATTCCCAACACTTTG+TGG | 0.436079 | 7.1:+78443235 | MS.gene022057:CDS |
GAAGTCAGAAGTTGAGGATA+GGG | 0.442070 | 7.1:+78443213 | MS.gene022057:CDS |
TTGCATATCCAAATGATTTG+TGG | 0.442799 | 7.1:-78443483 | None:intergenic |
AGCTAAGTTTGCAGCAGCTA+AGG | 0.445509 | 7.1:+78442878 | MS.gene022057:CDS |
CCTCCTGATAGTTTGACAAT+GGG | 0.445696 | 7.1:-78443392 | None:intergenic |
GTGTTTCATCCATTGTTAGT+AGG | 0.453766 | 7.1:-78443259 | None:intergenic |
TATGCAGAAGCTTTCGGAGC+AGG | 0.454924 | 7.1:-78441736 | None:intergenic |
CATTCTCCAGCCGCCACTAA+AGG | 0.455107 | 7.1:-78442502 | None:intergenic |
AGAAGGACATCAATATTCTT+AGG | 0.458676 | 7.1:-78442189 | None:intergenic |
CTTGCTTACTAAGCCCCTCC+TGG | 0.460120 | 7.1:-78443313 | None:intergenic |
TGATGTCCTTCTGGTTGAGC+AGG | 0.464580 | 7.1:+78442200 | MS.gene022057:CDS |
GGTGTAAGTTCAGTAGGTTC+AGG | 0.465377 | 7.1:-78443002 | None:intergenic |
AGTCGAGCTTCGGTGCTTGA+TGG | 0.465390 | 7.1:+78441976 | MS.gene022057:CDS |
AAATTTCCCTGGAACATTTG+AGG | 0.467370 | 7.1:+78443646 | MS.gene022057:CDS |
TTGATTGGGCCGAATGGAAT+GGG | 0.471197 | 7.1:+78442120 | MS.gene022057:CDS |
GTGCAAAACTTGGTAAATAT+GGG | 0.472556 | 7.1:+78443345 | MS.gene022057:CDS |
CAAAATCCTTTAGTGGCGGC+TGG | 0.473137 | 7.1:+78442496 | MS.gene022057:CDS |
GAAAACGGTATGGTTTGATT+GGG | 0.473363 | 7.1:+78442106 | MS.gene022057:CDS |
GTTGACTTGCCCATTCCATT+CGG | 0.473986 | 7.1:-78442129 | None:intergenic |
TAGTAGGTCCACAAAGTGTT+GGG | 0.476791 | 7.1:-78443243 | None:intergenic |
TATCAGGAGGGCAGAAAGCT+CGG | 0.480167 | 7.1:+78443405 | MS.gene022057:CDS |
CAAATATGGGTTGTTGAAGA+TGG | 0.482826 | 7.1:+78443614 | MS.gene022057:CDS |
GTTCAGTAGGTTCAGGAAAG+TGG | 0.490159 | 7.1:-78442995 | None:intergenic |
CCCTCCTGATAGTTTGACAA+TGG | 0.490991 | 7.1:-78443393 | None:intergenic |
ATCAGGAGGGCAGAAAGCTC+GGG | 0.492201 | 7.1:+78443406 | MS.gene022057:CDS |
TGATGCATTGGCTGATGCGC+TGG | 0.493126 | 7.1:+78443511 | MS.gene022057:CDS |
AGACTCTCGGATGTTGATGT+TGG | 0.493998 | 7.1:+78443080 | MS.gene022057:CDS |
CCTCAGGTCAAGATGATTAG+TGG | 0.497140 | 7.1:-78442583 | None:intergenic |
AAAAGCAAAAGCAAGGGAAA+GGG | 0.497237 | 7.1:+78442906 | MS.gene022057:CDS |
TAAAGATATCTCATGGAAAA+CGG | 0.497247 | 7.1:+78442091 | MS.gene022057:CDS |
TGTCATTGGAAGTCGAGCTT+CGG | 0.497818 | 7.1:+78441966 | MS.gene022057:CDS |
GGCAAAGAAAGAAGCTCTTA+GGG | 0.499292 | 7.1:+78441921 | MS.gene022057:CDS |
GGACTCGTGTTGCCATTGTT+GGG | 0.501610 | 7.1:+78443114 | MS.gene022057:CDS |
CTGGTTGAGCAGGAGGTAGT+TGG | 0.501745 | 7.1:+78442210 | MS.gene022057:CDS |
CGTCCTACAAAATCCTTTAG+TGG | 0.502520 | 7.1:+78442489 | MS.gene022057:CDS |
TTGAAACTTCATTTCTATCG+TGG | 0.502609 | 7.1:+78442720 | MS.gene022057:CDS |
TATTGAAGCTTCTTGCTTGG+AGG | 0.502846 | 7.1:+78442154 | MS.gene022057:CDS |
TTCGAAGAAGTCAGAAGTTG+AGG | 0.502896 | 7.1:+78443207 | MS.gene022057:CDS |
TAGCAAAGATGTTTCTAAGA+AGG | 0.504069 | 7.1:+78441624 | MS.gene022057:CDS |
AATGCAGCTTCTGGTGAAGA+AGG | 0.504187 | 7.1:+78442315 | MS.gene022057:CDS |
GAGGCTGTTCGTGCAAAACT+TGG | 0.509140 | 7.1:+78443335 | MS.gene022057:CDS |
AGAAGTCAGAAGTTGAGGAT+AGG | 0.509662 | 7.1:+78443212 | MS.gene022057:CDS |
CTTTGCCTGTTCAGCCACAT+GGG | 0.510208 | 7.1:-78441905 | None:intergenic |
TTAGTAGGTCCACAAAGTGT+TGG | 0.510313 | 7.1:-78443244 | None:intergenic |
TCTTGCTTGGAGGAAGATAC+CGG | 0.512342 | 7.1:+78442164 | MS.gene022057:CDS |
TAGAGGAGTACTTGTGTCGT+TGG | 0.513249 | 7.1:+78442619 | MS.gene022057:CDS |
AGTGGAGGTGTAAGTTCAGT+AGG | 0.514390 | 7.1:-78443008 | None:intergenic |
TTTGATTGGGCCGAATGGAA+TGG | 0.517459 | 7.1:+78442119 | MS.gene022057:CDS |
GAAAAGCAAAAGCAAGGGAA+AGG | 0.518492 | 7.1:+78442905 | MS.gene022057:CDS |
TCAGTGTATGCAGAAGCTTT+CGG | 0.518649 | 7.1:-78441742 | None:intergenic |
TATGAACAATTACAACTGAT+GGG | 0.518809 | 7.1:+78442396 | MS.gene022057:CDS |
ACCTGCCAACATGGCAGAGA+CGG | 0.520257 | 7.1:-78441656 | None:intergenic |
GTATGAACAATTACAACTGA+TGG | 0.520659 | 7.1:+78442395 | MS.gene022057:CDS |
AAATGATACTAACGAGGAAG+AGG | 0.525034 | 7.1:+78442347 | MS.gene022057:CDS |
GATGCGCTGGATGAATTCAC+TGG | 0.525230 | 7.1:+78443524 | MS.gene022057:CDS |
TGTCCTTCTGGTTGAGCAGG+AGG | 0.526914 | 7.1:+78442203 | MS.gene022057:CDS |
TAAGCCCCTCCTGGTCTGGA+TGG | 0.527473 | 7.1:-78443304 | None:intergenic |
ATTGTTGGGCCTAATGGTGC+TGG | 0.529640 | 7.1:+78443128 | MS.gene022057:CDS |
AGACGAAGAAGGTACTGAAC+AGG | 0.533085 | 7.1:-78443281 | None:intergenic |
TTAGAAACATCTTTGCTACC+TGG | 0.537424 | 7.1:-78441619 | None:intergenic |
TGGAACATTTGAGGATTACA+AGG | 0.538781 | 7.1:+78443655 | MS.gene022057:CDS |
TATGCAAAGTATTGATGCAT+TGG | 0.543005 | 7.1:+78443499 | MS.gene022057:CDS |
ACTAACGAGGAAGAGGATGC+AGG | 0.546607 | 7.1:+78442354 | MS.gene022057:CDS |
ACTTCAGTAAAGATATCTCA+TGG | 0.548568 | 7.1:+78442084 | MS.gene022057:CDS |
GAACAAGGCTCAACAAGATA+AGG | 0.549422 | 7.1:+78442845 | MS.gene022057:CDS |
AGCTAGAAGAACCGGGAACA+AGG | 0.549535 | 7.1:+78442830 | MS.gene022057:CDS |
TGAAGAACGGAGTCAAATAT+GGG | 0.551908 | 7.1:+78443601 | MS.gene022057:CDS |
ATATCTCATGGAAAACGGTA+TGG | 0.553869 | 7.1:+78442096 | MS.gene022057:CDS |
GGCACTGTCAGAAATTTCCC+TGG | 0.559821 | 7.1:+78443635 | MS.gene022057:CDS |
CGTCTCCATCCAGACCAGGA+GGG | 0.561023 | 7.1:+78443299 | MS.gene022057:CDS |
TGAGTCTGAAGAGGAGCTAG+AGG | 0.562887 | 7.1:+78441795 | MS.gene022057:CDS |
GTCTCCATCCAGACCAGGAG+GGG | 0.564083 | 7.1:+78443300 | MS.gene022057:CDS |
CACTAATCATCTTGACCTGA+GGG | 0.565689 | 7.1:+78442584 | MS.gene022057:CDS |
TTCATCCATACCTGCCAACA+TGG | 0.566109 | 7.1:-78441665 | None:intergenic |
CTTTGTGGACCTACTAACAA+TGG | 0.566897 | 7.1:+78443250 | MS.gene022057:CDS |
TCTTCGTCTCCATCCAGACC+AGG | 0.570272 | 7.1:+78443295 | MS.gene022057:CDS |
ACTTCAATAAGCTGCAGAAG+TGG | 0.570862 | 7.1:-78443026 | None:intergenic |
GGAATCGAAAAGCAAAAGCA+AGG | 0.571756 | 7.1:+78442899 | MS.gene022057:CDS |
TATGGTTTGATTGGGCCGAA+TGG | 0.572136 | 7.1:+78442114 | MS.gene022057:CDS |
TTGACCTGAGGGCTGTTCTG+TGG | 0.577822 | 7.1:+78442595 | MS.gene022057:CDS |
ACATCAATATTCTTAGGCAC+CGG | 0.584768 | 7.1:-78442183 | None:intergenic |
ACACTGCTGAATCTTCTAGC+TGG | 0.589769 | 7.1:+78443158 | MS.gene022057:CDS |
TTCAGACTCATCATCATCAG+AGG | 0.591473 | 7.1:-78441782 | None:intergenic |
TGATGATGATGAGTCTGAAG+AGG | 0.592511 | 7.1:+78441786 | MS.gene022057:CDS |
TAGAGGTACCACACAAGTGG+AGG | 0.593380 | 7.1:+78442955 | MS.gene022057:CDS |
GCCCGATTTGAAGCCACTTG+AGG | 0.595553 | 7.1:+78441828 | MS.gene022057:CDS |
GAATCGAAAAGCAAAAGCAA+GGG | 0.597247 | 7.1:+78442900 | MS.gene022057:CDS |
CTTGTGTGGTACCTCTACTT+GGG | 0.597963 | 7.1:-78442949 | None:intergenic |
CTCAGGTCAAGATGATTAGT+GGG | 0.599587 | 7.1:-78442582 | None:intergenic |
GGGAAAGGGAAAGGTTGATG+AGG | 0.600456 | 7.1:+78442920 | MS.gene022057:CDS |
CCGAGAGTCTAAAATCCTCT+CGG | 0.603865 | 7.1:-78443067 | None:intergenic |
CTAACCACAGAACAGCCCTC+AGG | 0.604974 | 7.1:-78442599 | None:intergenic |
CTGTAGTCCCTCCACTTGTG+TGG | 0.605482 | 7.1:-78442963 | None:intergenic |
TTGATGTTGGTATTGATATG+GGG | 0.606166 | 7.1:+78443093 | MS.gene022057:CDS |
AAGTAGAGGTACCACACAAG+TGG | 0.606298 | 7.1:+78442952 | MS.gene022057:CDS |
CAAAAGCAAGGGAAAGGGAA+AGG | 0.608390 | 7.1:+78442911 | MS.gene022057:CDS |
GGGGTAAGATGATTATGACT+TGG | 0.608520 | 7.1:-78443371 | None:intergenic |
TCATCGAGCAATAATAGAGT+GGG | 0.608704 | 7.1:-78442558 | None:intergenic |
TCAATAAGCTGCAGAAGTGG+AGG | 0.610264 | 7.1:-78443023 | None:intergenic |
GGTGATTTGGTTCCAAGTGA+AGG | 0.610276 | 7.1:+78443179 | MS.gene022057:CDS |
TCAGACTCATCATCATCAGA+GGG | 0.613503 | 7.1:-78441781 | None:intergenic |
TGTAATCCTCAAATGTTCCA+GGG | 0.613886 | 7.1:-78443652 | None:intergenic |
TTCATCGAGCAATAATAGAG+TGG | 0.615022 | 7.1:-78442559 | None:intergenic |
GGAGGGGCTTAGTAAGCAAG+AGG | 0.616783 | 7.1:+78443316 | MS.gene022057:CDS |
CCCATTGTCAAACTATCAGG+AGG | 0.619312 | 7.1:+78443392 | MS.gene022057:CDS |
AGGAGCTAGAGGAAAAGCAT+AGG | 0.621065 | 7.1:+78441806 | MS.gene022057:CDS |
TCAGCAATAGACACCTCAAG+TGG | 0.621486 | 7.1:-78441841 | None:intergenic |
TCGGTGCTTGATGGAGATGA+TGG | 0.624032 | 7.1:+78441985 | MS.gene022057:CDS |
TCATCTAACAATAAAATGTG+AGG | 0.624906 | 7.1:-78443458 | None:intergenic |
CTCCTGATAGTTTGACAATG+GGG | 0.626825 | 7.1:-78443391 | None:intergenic |
CCACTAATCATCTTGACCTG+AGG | 0.627165 | 7.1:+78442583 | MS.gene022057:CDS |
CCATCTACAAAGGCTAAACC+AGG | 0.627415 | 7.1:+78441601 | MS.gene022057:CDS |
CTACCTCCTGCTCAACCAGA+AGG | 0.630434 | 7.1:-78442206 | None:intergenic |
TGAAAGCAGCTAGAAGAACC+GGG | 0.637063 | 7.1:+78442823 | MS.gene022057:CDS |
AGCACCATTAGGCCCAACAA+TGG | 0.640352 | 7.1:-78443126 | None:intergenic |
GGTCTGGATGGAGACGAAGA+AGG | 0.643717 | 7.1:-78443292 | None:intergenic |
GGCTCAACAAGATAAGGTGA+AGG | 0.644665 | 7.1:+78442851 | MS.gene022057:CDS |
TCGTCTCCATCCAGACCAGG+AGG | 0.645629 | 7.1:+78443298 | MS.gene022057:CDS |
TAAAATGTGAGGTCTTGACA+TGG | 0.645742 | 7.1:-78443447 | None:intergenic |
TCCTGATAGTTTGACAATGG+GGG | 0.650226 | 7.1:-78443390 | None:intergenic |
TGAGGATGAGACCCAAGTAG+AGG | 0.652669 | 7.1:+78442938 | MS.gene022057:CDS |
AGAGGTACCACACAAGTGGA+GGG | 0.653345 | 7.1:+78442956 | MS.gene022057:CDS |
GACTCATCATCATCAGAGGG+AGG | 0.655723 | 7.1:-78441778 | None:intergenic |
AGGAGGGCAGAAAGCTCGGG+TGG | 0.658600 | 7.1:+78443409 | MS.gene022057:CDS |
CCTACAAAATCCTTTAGTGG+CGG | 0.660892 | 7.1:+78442492 | MS.gene022057:CDS |
ATGAACAATTACAACTGATG+GGG | 0.661536 | 7.1:+78442397 | MS.gene022057:CDS |
AGCTTCTGGTGAAGAAGGTG+TGG | 0.667605 | 7.1:+78442320 | MS.gene022057:CDS |
GCGCTGGATGAATTCACTGG+TGG | 0.669802 | 7.1:+78443527 | MS.gene022057:CDS |
GGATGCAGGACCATCTACAA+AGG | 0.679069 | 7.1:+78441591 | MS.gene022057:CDS |
CCATTGTCAAACTATCAGGA+GGG | 0.684004 | 7.1:+78443393 | MS.gene022057:CDS |
CAAGTGGAGGGACTACAGCG+TGG | 0.701926 | 7.1:+78442968 | MS.gene022057:CDS |
CTTCAGTTACCCAAACCGAG+AGG | 0.710739 | 7.1:+78443052 | MS.gene022057:CDS |
GTGTCTGTGATGATGAAGAA+CGG | 0.713477 | 7.1:+78443588 | MS.gene022057:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | TAAAGATATCTCATGGAAAA+CGG | + | chr7.1:78442091-78442110 | MS.gene022057:CDS | 25.0% |
! | TATGAACAATTACAACTGAT+GGG | + | chr7.1:78442396-78442415 | MS.gene022057:CDS | 25.0% |
! | TCATCTAACAATAAAATGTG+AGG | - | chr7.1:78443461-78443480 | None:intergenic | 25.0% |
AAAAGCTGATAAGCCTAAAA+AGG | + | chr7.1:78441687-78441706 | MS.gene022057:CDS | 30.0% | |
ACTTCAGTAAAGATATCTCA+TGG | + | chr7.1:78442084-78442103 | MS.gene022057:CDS | 30.0% | |
AGAAGGACATCAATATTCTT+AGG | - | chr7.1:78442192-78442211 | None:intergenic | 30.0% | |
ATGAACAATTACAACTGATG+GGG | + | chr7.1:78442397-78442416 | MS.gene022057:CDS | 30.0% | |
GGATAAAAATGATACTAACG+AGG | + | chr7.1:78442341-78442360 | MS.gene022057:CDS | 30.0% | |
GTATGAACAATTACAACTGA+TGG | + | chr7.1:78442395-78442414 | MS.gene022057:CDS | 30.0% | |
GTGCAAAACTTGGTAAATAT+GGG | + | chr7.1:78443345-78443364 | MS.gene022057:CDS | 30.0% | |
TAAGAATATTGATGTCCTTC+TGG | + | chr7.1:78442191-78442210 | MS.gene022057:CDS | 30.0% | |
TTGAAACTTCATTTCTATCG+TGG | + | chr7.1:78442720-78442739 | MS.gene022057:CDS | 30.0% | |
TTGCATATCCAAATGATTTG+TGG | - | chr7.1:78443486-78443505 | None:intergenic | 30.0% | |
! | TAGCAAAGATGTTTCTAAGA+AGG | + | chr7.1:78441624-78441643 | MS.gene022057:CDS | 30.0% |
! | TGCATATCCAAATGATTTGT+GGG | - | chr7.1:78443485-78443504 | None:intergenic | 30.0% |
! | TTATTCGAAGATGCCTTTTT+AGG | - | chr7.1:78441703-78441722 | None:intergenic | 30.0% |
!! | AATTTTGATGCTTTTGAGAG+TGG | + | chr7.1:78442744-78442763 | MS.gene022057:CDS | 30.0% |
!! | ATTTTGATGCTTTTGAGAGT+GGG | + | chr7.1:78442745-78442764 | MS.gene022057:CDS | 30.0% |
!! | GTTGATGTTGGTATTGATAT+GGG | + | chr7.1:78443092-78443111 | MS.gene022057:CDS | 30.0% |
!! | TAAAAAGGCATCTTCGAATA+AGG | + | chr7.1:78441702-78441721 | MS.gene022057:CDS | 30.0% |
!! | TATGCAAAGTATTGATGCAT+TGG | + | chr7.1:78443499-78443518 | MS.gene022057:CDS | 30.0% |
!! | TGTTGATGTTGGTATTGATA+TGG | + | chr7.1:78443091-78443110 | MS.gene022057:CDS | 30.0% |
!! | TTGATGTTGGTATTGATATG+GGG | + | chr7.1:78443093-78443112 | MS.gene022057:CDS | 30.0% |
AAAAGCAAAAGCAAGGGAAA+GGG | + | chr7.1:78442906-78442925 | MS.gene022057:CDS | 35.0% | |
AAATGATACTAACGAGGAAG+AGG | + | chr7.1:78442347-78442366 | MS.gene022057:CDS | 35.0% | |
AAATTTCCCTGGAACATTTG+AGG | + | chr7.1:78443646-78443665 | MS.gene022057:CDS | 35.0% | |
ACATCAATATTCTTAGGCAC+CGG | - | chr7.1:78442186-78442205 | None:intergenic | 35.0% | |
AGATGAACCCACAAATCATT+TGG | + | chr7.1:78443475-78443494 | MS.gene022057:CDS | 35.0% | |
ATATCTCATGGAAAACGGTA+TGG | + | chr7.1:78442096-78442115 | MS.gene022057:CDS | 35.0% | |
ATGAAGAACGGAGTCAAATA+TGG | + | chr7.1:78443600-78443619 | MS.gene022057:CDS | 35.0% | |
CGTGCAAAACTTGGTAAATA+TGG | + | chr7.1:78443344-78443363 | MS.gene022057:CDS | 35.0% | |
GAAAACGGTATGGTTTGATT+GGG | + | chr7.1:78442106-78442125 | MS.gene022057:CDS | 35.0% | |
GAATCGAAAAGCAAAAGCAA+GGG | + | chr7.1:78442900-78442919 | MS.gene022057:CDS | 35.0% | |
GTGTTTCATCCATTGTTAGT+AGG | - | chr7.1:78443262-78443281 | None:intergenic | 35.0% | |
TAAAATGTGAGGTCTTGACA+TGG | - | chr7.1:78443450-78443469 | None:intergenic | 35.0% | |
TCATCGAGCAATAATAGAGT+GGG | - | chr7.1:78442561-78442580 | None:intergenic | 35.0% | |
TCGTTGGAAAAAAACTTTGG+TGG | + | chr7.1:78442635-78442654 | MS.gene022057:CDS | 35.0% | |
TGAAGAACGGAGTCAAATAT+GGG | + | chr7.1:78443601-78443620 | MS.gene022057:CDS | 35.0% | |
TGGAACATTTGAGGATTACA+AGG | + | chr7.1:78443655-78443674 | MS.gene022057:CDS | 35.0% | |
TGTAATCCTCAAATGTTCCA+GGG | - | chr7.1:78443655-78443674 | None:intergenic | 35.0% | |
TTAGAAACATCTTTGCTACC+TGG | - | chr7.1:78441622-78441641 | None:intergenic | 35.0% | |
TTCATCGAGCAATAATAGAG+TGG | - | chr7.1:78442562-78442581 | None:intergenic | 35.0% | |
TTGTAATCCTCAAATGTTCC+AGG | - | chr7.1:78443656-78443675 | None:intergenic | 35.0% | |
! | AAATTTTTCTGTGTCTGCAC+TGG | + | chr7.1:78442041-78442060 | MS.gene022057:CDS | 35.0% |
! | AATTTTTCTGTGTCTGCACT+GGG | + | chr7.1:78442042-78442061 | MS.gene022057:CDS | 35.0% |
! | CAAATATGGGTTGTTGAAGA+TGG | + | chr7.1:78443614-78443633 | MS.gene022057:CDS | 35.0% |
! | CACTAAAGGATTTTGTAGGA+CGG | - | chr7.1:78442491-78442510 | None:intergenic | 35.0% |
! | GATGCTTTTACTGTTGTCAT+TGG | + | chr7.1:78441952-78441971 | MS.gene022057:CDS | 35.0% |
! | GTGTCGTTGGAAAAAAACTT+TGG | + | chr7.1:78442632-78442651 | MS.gene022057:CDS | 35.0% |
!!! | TCAAAGATTTTAGCTGGTCT+GGG | + | chr7.1:78442444-78442463 | MS.gene022057:CDS | 35.0% |
AAGAAAAAGTCAGAGGATGC+AGG | + | chr7.1:78441577-78441596 | MS.gene022057:CDS | 40.0% | |
ACTTCAATAAGCTGCAGAAG+TGG | - | chr7.1:78443029-78443048 | None:intergenic | 40.0% | |
AGAAGTCAGAAGTTGAGGAT+AGG | + | chr7.1:78443212-78443231 | MS.gene022057:CDS | 40.0% | |
AGGCAAAGAAAGAAGCTCTT+AGG | + | chr7.1:78441920-78441939 | MS.gene022057:CDS | 40.0% | |
CACTAATCATCTTGACCTGA+GGG | + | chr7.1:78442584-78442603 | MS.gene022057:CDS | 40.0% | |
CACTATTGAAGCTTCTTGCT+TGG | + | chr7.1:78442151-78442170 | MS.gene022057:CDS | 40.0% | |
CCATTGTCAAACTATCAGGA+GGG | + | chr7.1:78443393-78443412 | MS.gene022057:CDS | 40.0% | |
CCTACAAAATCCTTTAGTGG+CGG | + | chr7.1:78442492-78442511 | MS.gene022057:CDS | 40.0% | |
CCTCCTGATAGTTTGACAAT+GGG | - | chr7.1:78443395-78443414 | None:intergenic | 40.0% | |
CGTCCTACAAAATCCTTTAG+TGG | + | chr7.1:78442489-78442508 | MS.gene022057:CDS | 40.0% | |
CTCAGGTCAAGATGATTAGT+GGG | - | chr7.1:78442585-78442604 | None:intergenic | 40.0% | |
CTCCTGATAGTTTGACAATG+GGG | - | chr7.1:78443394-78443413 | None:intergenic | 40.0% | |
CTTTGTGGACCTACTAACAA+TGG | + | chr7.1:78443250-78443269 | MS.gene022057:CDS | 40.0% | |
GAAAAGCAAAAGCAAGGGAA+AGG | + | chr7.1:78442905-78442924 | MS.gene022057:CDS | 40.0% | |
GAACAAGGCTCAACAAGATA+AGG | + | chr7.1:78442845-78442864 | MS.gene022057:CDS | 40.0% | |
GAAGTCAGAAGTTGAGGATA+GGG | + | chr7.1:78443213-78443232 | MS.gene022057:CDS | 40.0% | |
GAGATATTCCCAACACTTTG+TGG | + | chr7.1:78443235-78443254 | MS.gene022057:CDS | 40.0% | |
GATCTACAAAATGCAGCTTC+TGG | + | chr7.1:78442306-78442325 | MS.gene022057:CDS | 40.0% | |
GGAAAACGGTATGGTTTGAT+TGG | + | chr7.1:78442105-78442124 | MS.gene022057:CDS | 40.0% | |
GGAATCGAAAAGCAAAAGCA+AGG | + | chr7.1:78442899-78442918 | MS.gene022057:CDS | 40.0% | |
GGCAAAGAAAGAAGCTCTTA+GGG | + | chr7.1:78441921-78441940 | MS.gene022057:CDS | 40.0% | |
GGGGTAAGATGATTATGACT+TGG | - | chr7.1:78443374-78443393 | None:intergenic | 40.0% | |
TATTGAAGCTTCTTGCTTGG+AGG | + | chr7.1:78442154-78442173 | MS.gene022057:CDS | 40.0% | |
TCAGACTCATCATCATCAGA+GGG | - | chr7.1:78441784-78441803 | None:intergenic | 40.0% | |
TCAGTGTATGCAGAAGCTTT+CGG | - | chr7.1:78441745-78441764 | None:intergenic | 40.0% | |
TCCTGATAGTTTGACAATGG+GGG | - | chr7.1:78443393-78443412 | None:intergenic | 40.0% | |
TTAGTAGGTCCACAAAGTGT+TGG | - | chr7.1:78443247-78443266 | None:intergenic | 40.0% | |
TTCAGACTCATCATCATCAG+AGG | - | chr7.1:78441785-78441804 | None:intergenic | 40.0% | |
TTCGAAGAAGTCAGAAGTTG+AGG | + | chr7.1:78443207-78443226 | MS.gene022057:CDS | 40.0% | |
TTGAAAGCAGCTAGAAGAAC+CGG | + | chr7.1:78442822-78442841 | MS.gene022057:CDS | 40.0% | |
! | AGTCTAAAATCCTCTCGGTT+TGG | - | chr7.1:78443065-78443084 | None:intergenic | 40.0% |
! | GAATCTTCTAGCTGGTGATT+TGG | + | chr7.1:78443166-78443185 | MS.gene022057:CDS | 40.0% |
! | GGTTTTACAAAGGACATGCA+GGG | + | chr7.1:78442465-78442484 | MS.gene022057:CDS | 40.0% |
! | GTAGATTTTCCAGCACCATT+AGG | - | chr7.1:78443140-78443159 | None:intergenic | 40.0% |
! | GTCTAAAATCCTCTCGGTTT+GGG | - | chr7.1:78443064-78443083 | None:intergenic | 40.0% |
! | GTGTCTGTGATGATGAAGAA+CGG | + | chr7.1:78443588-78443607 | MS.gene022057:CDS | 40.0% |
! | TAGTAGGTCCACAAAGTGTT+GGG | - | chr7.1:78443246-78443265 | None:intergenic | 40.0% |
! | TGATGATGATGAGTCTGAAG+AGG | + | chr7.1:78441786-78441805 | MS.gene022057:CDS | 40.0% |
!! | CAAGCGTCAAAGATTTTAGC+TGG | + | chr7.1:78442438-78442457 | MS.gene022057:CDS | 40.0% |
!!! | AGATATTTTAGCTGCCCATG+TGG | + | chr7.1:78441891-78441910 | MS.gene022057:CDS | 40.0% |
!!! | GTCAAAGATTTTAGCTGGTC+TGG | + | chr7.1:78442443-78442462 | MS.gene022057:CDS | 40.0% |
AATGCAGCTTCTGGTGAAGA+AGG | + | chr7.1:78442315-78442334 | MS.gene022057:CDS | 45.0% | |
ACACTGCTGAATCTTCTAGC+TGG | + | chr7.1:78443158-78443177 | MS.gene022057:CDS | 45.0% | |
ACCCCCATTGTCAAACTATC+AGG | + | chr7.1:78443389-78443408 | MS.gene022057:CDS | 45.0% | |
ACCTCAAGTGGCTTCAAATC+GGG | - | chr7.1:78441832-78441851 | None:intergenic | 45.0% | |
ACTTGTGTGGTACCTCTACT+TGG | - | chr7.1:78442953-78442972 | None:intergenic | 45.0% | |
AGACTCTCGGATGTTGATGT+TGG | + | chr7.1:78443080-78443099 | MS.gene022057:CDS | 45.0% | |
AGCTAAGTTTGCAGCAGCTA+AGG | + | chr7.1:78442878-78442897 | MS.gene022057:CDS | 45.0% | |
CAAAAGCAAGGGAAAGGGAA+AGG | + | chr7.1:78442911-78442930 | MS.gene022057:CDS | 45.0% | |
CACCTCAAGTGGCTTCAAAT+CGG | - | chr7.1:78441833-78441852 | None:intergenic | 45.0% | |
CCACTAATCATCTTGACCTG+AGG | + | chr7.1:78442583-78442602 | MS.gene022057:CDS | 45.0% | |
CCATCTACAAAGGCTAAACC+AGG | + | chr7.1:78441601-78441620 | MS.gene022057:CDS | 45.0% | |
CCCATTGTCAAACTATCAGG+AGG | + | chr7.1:78443392-78443411 | MS.gene022057:CDS | 45.0% | |
CCCTCCTGATAGTTTGACAA+TGG | - | chr7.1:78443396-78443415 | None:intergenic | 45.0% | |
CCTCAGGTCAAGATGATTAG+TGG | - | chr7.1:78442586-78442605 | None:intergenic | 45.0% | |
CTTCGAACTTCACCTTCACT+TGG | - | chr7.1:78443194-78443213 | None:intergenic | 45.0% | |
CTTGTGTGGTACCTCTACTT+GGG | - | chr7.1:78442952-78442971 | None:intergenic | 45.0% | |
GGCTCAACAAGATAAGGTGA+AGG | + | chr7.1:78442851-78442870 | MS.gene022057:CDS | 45.0% | |
GGTGTAAGTTCAGTAGGTTC+AGG | - | chr7.1:78443005-78443024 | None:intergenic | 45.0% | |
GTTCAGTAGGTTCAGGAAAG+TGG | - | chr7.1:78442998-78443017 | None:intergenic | 45.0% | |
TATGGTTTGATTGGGCCGAA+TGG | + | chr7.1:78442114-78442133 | MS.gene022057:CDS | 45.0% | |
TCAATAAGCTGCAGAAGTGG+AGG | - | chr7.1:78443026-78443045 | None:intergenic | 45.0% | |
TCAGCAATAGACACCTCAAG+TGG | - | chr7.1:78441844-78441863 | None:intergenic | 45.0% | |
TCTTGCTTGGAGGAAGATAC+CGG | + | chr7.1:78442164-78442183 | MS.gene022057:CDS | 45.0% | |
TGAAAGCAGCTAGAAGAACC+GGG | + | chr7.1:78442823-78442842 | MS.gene022057:CDS | 45.0% | |
TGTCATTGGAAGTCGAGCTT+CGG | + | chr7.1:78441966-78441985 | MS.gene022057:CDS | 45.0% | |
TTCATCCATACCTGCCAACA+TGG | - | chr7.1:78441668-78441687 | None:intergenic | 45.0% | |
TTGATTGGGCCGAATGGAAT+GGG | + | chr7.1:78442120-78442139 | MS.gene022057:CDS | 45.0% | |
TTTGATTGGGCCGAATGGAA+TGG | + | chr7.1:78442119-78442138 | MS.gene022057:CDS | 45.0% | |
! | AGGAGCTAGAGGAAAAGCAT+AGG | + | chr7.1:78441806-78441825 | MS.gene022057:CDS | 45.0% |
! | AGTGGAGGTGTAAGTTCAGT+AGG | - | chr7.1:78443011-78443030 | None:intergenic | 45.0% |
! | ATTTTCCGTCTCTGCCATGT+TGG | + | chr7.1:78441651-78441670 | MS.gene022057:CDS | 45.0% |
! | CCGAGAGGATTTTAGACTCT+CGG | + | chr7.1:78443067-78443086 | MS.gene022057:CDS | 45.0% |
! | CCGAGAGTCTAAAATCCTCT+CGG | - | chr7.1:78443070-78443089 | None:intergenic | 45.0% |
! | CCGCCACTAAAGGATTTTGT+AGG | - | chr7.1:78442495-78442514 | None:intergenic | 45.0% |
! | CCTGGTTTAGCCTTTGTAGA+TGG | - | chr7.1:78441604-78441623 | None:intergenic | 45.0% |
! | GGGTTTTACAAAGGACATGC+AGG | + | chr7.1:78442464-78442483 | MS.gene022057:CDS | 45.0% |
!! | AAGTAGAGGTACCACACAAG+TGG | + | chr7.1:78442952-78442971 | MS.gene022057:CDS | 45.0% |
!! | AGACGAAGAAGGTACTGAAC+AGG | - | chr7.1:78443284-78443303 | None:intergenic | 45.0% |
!! | AGCTGGTCTGGGTTTTACAA+AGG | + | chr7.1:78442455-78442474 | MS.gene022057:CDS | 45.0% |
!! | ATCTTGTTGAGCCTTGTTCC+CGG | - | chr7.1:78442844-78442863 | None:intergenic | 45.0% |
!! | GGTGATTTGGTTCCAAGTGA+AGG | + | chr7.1:78443179-78443198 | MS.gene022057:CDS | 45.0% |
!! | GTTGACTTGCCCATTCCATT+CGG | - | chr7.1:78442132-78442151 | None:intergenic | 45.0% |
!! | TAGAGGAGTACTTGTGTCGT+TGG | + | chr7.1:78442619-78442638 | MS.gene022057:CDS | 45.0% |
ACTAACGAGGAAGAGGATGC+AGG | + | chr7.1:78442354-78442373 | MS.gene022057:CDS | 50.0% | |
AGCACCATTAGGCCCAACAA+TGG | - | chr7.1:78443129-78443148 | None:intergenic | 50.0% | |
AGCTAGAAGAACCGGGAACA+AGG | + | chr7.1:78442830-78442849 | MS.gene022057:CDS | 50.0% | |
AGCTTCTGGTGAAGAAGGTG+TGG | + | chr7.1:78442320-78442339 | MS.gene022057:CDS | 50.0% | |
ATTGTTGGGCCTAATGGTGC+TGG | + | chr7.1:78443128-78443147 | MS.gene022057:CDS | 50.0% | |
CAAAATCCTTTAGTGGCGGC+TGG | + | chr7.1:78442496-78442515 | MS.gene022057:CDS | 50.0% | |
CTTCAGTTACCCAAACCGAG+AGG | + | chr7.1:78443052-78443071 | MS.gene022057:CDS | 50.0% | |
CTTTGCCTGTTCAGCCACAT+GGG | - | chr7.1:78441908-78441927 | None:intergenic | 50.0% | |
GACTCATCATCATCAGAGGG+AGG | - | chr7.1:78441781-78441800 | None:intergenic | 50.0% | |
GAGGCTGTTCGTGCAAAACT+TGG | + | chr7.1:78443335-78443354 | MS.gene022057:CDS | 50.0% | |
GATGCGCTGGATGAATTCAC+TGG | + | chr7.1:78443524-78443543 | MS.gene022057:CDS | 50.0% | |
GGACTCGTGTTGCCATTGTT+GGG | + | chr7.1:78443114-78443133 | MS.gene022057:CDS | 50.0% | |
GGATGCAGGACCATCTACAA+AGG | + | chr7.1:78441591-78441610 | MS.gene022057:CDS | 50.0% | |
GGCACTGTCAGAAATTTCCC+TGG | + | chr7.1:78443635-78443654 | MS.gene022057:CDS | 50.0% | |
GTTGCCATTGTTGGGCCTAA+TGG | + | chr7.1:78443122-78443141 | MS.gene022057:CDS | 50.0% | |
TATCAGGAGGGCAGAAAGCT+CGG | + | chr7.1:78443405-78443424 | MS.gene022057:CDS | 50.0% | |
TATGCAGAAGCTTTCGGAGC+AGG | - | chr7.1:78441739-78441758 | None:intergenic | 50.0% | |
TCTTTGCCTGTTCAGCCACA+TGG | - | chr7.1:78441909-78441928 | None:intergenic | 50.0% | |
TGAGGATGAGACCCAAGTAG+AGG | + | chr7.1:78442938-78442957 | MS.gene022057:CDS | 50.0% | |
TGAGTCTGAAGAGGAGCTAG+AGG | + | chr7.1:78441795-78441814 | MS.gene022057:CDS | 50.0% | |
! | GAAGCTTTCGGAGCAGGTTT+TGG | - | chr7.1:78441733-78441752 | None:intergenic | 50.0% |
! | TCGGTGCTTGATGGAGATGA+TGG | + | chr7.1:78441985-78442004 | MS.gene022057:CDS | 50.0% |
! | TGATGTCCTTCTGGTTGAGC+AGG | + | chr7.1:78442200-78442219 | MS.gene022057:CDS | 50.0% |
!! | AGAGGTACCACACAAGTGGA+GGG | + | chr7.1:78442956-78442975 | MS.gene022057:CDS | 50.0% |
!! | GGGAAAGGGAAAGGTTGATG+AGG | + | chr7.1:78442920-78442939 | MS.gene022057:CDS | 50.0% |
!! | TAGAGGTACCACACAAGTGG+AGG | + | chr7.1:78442955-78442974 | MS.gene022057:CDS | 50.0% |
ACCTGCCAACATGGCAGAGA+CGG | - | chr7.1:78441659-78441678 | None:intergenic | 55.0% | |
ATCAGGAGGGCAGAAAGCTC+GGG | + | chr7.1:78443406-78443425 | MS.gene022057:CDS | 55.0% | |
CATTCTCCAGCCGCCACTAA+AGG | - | chr7.1:78442505-78442524 | None:intergenic | 55.0% | |
CTAACCACAGAACAGCCCTC+AGG | - | chr7.1:78442602-78442621 | None:intergenic | 55.0% | |
CTACCTCCTGCTCAACCAGA+AGG | - | chr7.1:78442209-78442228 | None:intergenic | 55.0% | |
CTCTGCCATGTTGGCAGGTA+TGG | + | chr7.1:78441660-78441679 | MS.gene022057:CDS | 55.0% | |
CTGGTTGAGCAGGAGGTAGT+TGG | + | chr7.1:78442210-78442229 | MS.gene022057:CDS | 55.0% | |
CTGTAGTCCCTCCACTTGTG+TGG | - | chr7.1:78442966-78442985 | None:intergenic | 55.0% | |
CTTGCTTACTAAGCCCCTCC+TGG | - | chr7.1:78443316-78443335 | None:intergenic | 55.0% | |
GAGGGCTGTTCTGTGGTTAG+AGG | + | chr7.1:78442602-78442621 | MS.gene022057:CDS | 55.0% | |
GCGCTGGATGAATTCACTGG+TGG | + | chr7.1:78443527-78443546 | MS.gene022057:CDS | 55.0% | |
GGAGGGGCTTAGTAAGCAAG+AGG | + | chr7.1:78443316-78443335 | MS.gene022057:CDS | 55.0% | |
GGGACTCGTGTTGCCATTGT+TGG | + | chr7.1:78443113-78443132 | MS.gene022057:CDS | 55.0% | |
GGTCTGGATGGAGACGAAGA+AGG | - | chr7.1:78443295-78443314 | None:intergenic | 55.0% | |
TCTTCGTCTCCATCCAGACC+AGG | + | chr7.1:78443295-78443314 | MS.gene022057:CDS | 55.0% | |
TTACTAAGCCCCTCCTGGTC+TGG | - | chr7.1:78443311-78443330 | None:intergenic | 55.0% | |
TTGACCTGAGGGCTGTTCTG+TGG | + | chr7.1:78442595-78442614 | MS.gene022057:CDS | 55.0% | |
! | GCCCGATTTGAAGCCACTTG+AGG | + | chr7.1:78441828-78441847 | MS.gene022057:CDS | 55.0% |
! | TGTCCTTCTGGTTGAGCAGG+AGG | + | chr7.1:78442203-78442222 | MS.gene022057:CDS | 55.0% |
!! | AGTCGAGCTTCGGTGCTTGA+TGG | + | chr7.1:78441976-78441995 | MS.gene022057:CDS | 55.0% |
!! | TGATGCATTGGCTGATGCGC+TGG | + | chr7.1:78443511-78443530 | MS.gene022057:CDS | 55.0% |
AGCTGCCCATGTGGCTGAAC+AGG | + | chr7.1:78441900-78441919 | MS.gene022057:CDS | 60.0% | |
CAAGTGGAGGGACTACAGCG+TGG | + | chr7.1:78442968-78442987 | MS.gene022057:CDS | 60.0% | |
CGTCTCCATCCAGACCAGGA+GGG | + | chr7.1:78443299-78443318 | MS.gene022057:CDS | 60.0% | |
GTCTCCATCCAGACCAGGAG+GGG | + | chr7.1:78443300-78443319 | MS.gene022057:CDS | 60.0% | |
TAAGCCCCTCCTGGTCTGGA+TGG | - | chr7.1:78443307-78443326 | None:intergenic | 60.0% | |
TCCGTCTCTGCCATGTTGGC+AGG | + | chr7.1:78441655-78441674 | MS.gene022057:CDS | 60.0% | |
TCGTCTCCATCCAGACCAGG+AGG | + | chr7.1:78443298-78443317 | MS.gene022057:CDS | 60.0% | |
AGGAGGGCAGAAAGCTCGGG+TGG | + | chr7.1:78443409-78443428 | MS.gene022057:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.1 | gene | 78441571 | 78443718 | 78441571 | ID=MS.gene022057 |
chr7.1 | mRNA | 78441571 | 78443718 | 78441571 | ID=MS.gene022057.t1;Parent=MS.gene022057 |
chr7.1 | exon | 78441571 | 78443718 | 78441571 | ID=MS.gene022057.t1.exon1;Parent=MS.gene022057.t1 |
chr7.1 | CDS | 78441571 | 78443718 | 78441571 | ID=cds.MS.gene022057.t1;Parent=MS.gene022057.t1 |
Gene Sequence |
Protein sequence |