Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022231.t1 | XP_003601304.1 | 99 | 289 | 3 | 0 | 1 | 289 | 1 | 289 | 5.00E-150 | 540.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022231.t1 | F4IK01 | 74.5 | 282 | 71 | 1 | 5 | 285 | 13 | 294 | 2.8e-109 | 396.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022231.t1 | G7J611 | 99.0 | 289 | 3 | 0 | 1 | 289 | 1 | 289 | 3.6e-150 | 540.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene062778 | MS.gene022231 | PPI |
| MS.gene022231 | MS.gene67108 | PPI |
| MS.gene022231 | MS.gene028307 | PPI |
| MS.gene022231 | MS.gene36485 | PPI |
| MS.gene24383 | MS.gene022231 | PPI |
| MS.gene022231 | MS.gene044021 | PPI |
| MS.gene022231 | MS.gene35150 | PPI |
| MS.gene023147 | MS.gene022231 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022231.t1 | MTR_3g079220 | 98.962 | 289 | 3 | 0 | 1 | 289 | 1 | 289 | 0.0 | 584 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022231.t1 | AT2G41350 | 74.733 | 281 | 71 | 0 | 5 | 285 | 13 | 293 | 7.72e-154 | 432 |
| MS.gene022231.t1 | AT2G41350 | 74.468 | 282 | 71 | 1 | 5 | 285 | 13 | 294 | 4.76e-152 | 427 |
| MS.gene022231.t1 | AT2G21980 | 79.310 | 58 | 12 | 0 | 228 | 285 | 1 | 58 | 1.14e-24 | 94.4 |
Find 73 sgRNAs with CRISPR-Local
Find 307 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCTGCAACTTCGAAGGTTT+TGG | 0.267923 | 3.3:+66806721 | None:intergenic |
| GAGACGAGCGGCTTCGTCTT+TGG | 0.285848 | 3.3:+66806625 | None:intergenic |
| TCAGTCTCCACAGAAGTTTC+TGG | 0.296590 | 3.3:-66806770 | MS.gene022231:CDS |
| TGCAAGGATTAGAGAGATTC+TGG | 0.305262 | 3.3:-66806467 | MS.gene022231:CDS |
| AGAGATTAGCCATAGGGTTT+TGG | 0.308633 | 3.3:-66803358 | MS.gene022231:CDS |
| TCCAAAACCTTCGAAGTTGC+AGG | 0.358974 | 3.3:-66806722 | MS.gene022231:CDS |
| GCGTGGTGTGTATTCGAATT+CGG | 0.370925 | 3.3:+66806688 | None:intergenic |
| ATCTATATTCTGCGGCTTTG+AGG | 0.378929 | 3.3:+66806585 | None:intergenic |
| GAGCTACTTCATCTTCCAAT+TGG | 0.383390 | 3.3:+66805774 | None:intergenic |
| TTTAGCTTTCTTGTGGCAAT+GGG | 0.405983 | 3.3:-66806259 | MS.gene022231:intron |
| CGTGGTGTGTATTCGAATTC+GGG | 0.408134 | 3.3:+66806689 | None:intergenic |
| CGAGGTTAACATATTTGAAA+AGG | 0.410169 | 3.3:-66806141 | MS.gene022231:intron |
| AAAACCCTATGGCTAATCTC+TGG | 0.417355 | 3.3:+66803360 | None:intergenic |
| TCTTCTCGATTATACTAGAA+AGG | 0.427173 | 3.3:-66806170 | MS.gene022231:CDS |
| GTGCAGAACACTAGCCCAAT+TGG | 0.431088 | 3.3:-66805789 | MS.gene022231:intron |
| GTGTATTCGAATTCGGGAAC+GGG | 0.431311 | 3.3:+66806695 | None:intergenic |
| GATTCTGGAGAATGTAGGTT+TGG | 0.441568 | 3.3:-66806452 | MS.gene022231:CDS |
| AGAGAGATTCTGGAGAATGT+AGG | 0.442677 | 3.3:-66806457 | MS.gene022231:CDS |
| GAAATACCGGAGGCAAATCT+TGG | 0.443503 | 3.3:+66803265 | None:intergenic |
| CAATGTGGTTGCGTCGGCGC+AGG | 0.443838 | 3.3:-66806410 | MS.gene022231:CDS |
| AGACCGGTGTGGAGGAGAAA+AGG | 0.446370 | 3.3:-66806219 | MS.gene022231:CDS |
| GGTAACTTCTTAGAGTATCA+AGG | 0.454855 | 3.3:+66803286 | None:intergenic |
| AGCTACTTCATCTTCCAATT+GGG | 0.469118 | 3.3:+66805775 | None:intergenic |
| GAAAAGGGCTAAAGTGCATA+AGG | 0.474248 | 3.3:-66806203 | MS.gene022231:CDS |
| TGTGTATTCGAATTCGGGAA+CGG | 0.481161 | 3.3:+66806694 | None:intergenic |
| TAAGAGATACTGAACTTAGT+AGG | 0.497045 | 3.3:-66806357 | MS.gene022231:intron |
| AAACCCTATGGCTAATCTCT+GGG | 0.498715 | 3.3:+66803361 | None:intergenic |
| AAATAAACTAACCTCATAGT+TGG | 0.499847 | 3.3:+66805670 | None:intergenic |
| GGAGAATGTAGGTTTGGCTC+AGG | 0.504384 | 3.3:-66806446 | MS.gene022231:CDS |
| GATTATCCAGGATAAAGCTC+TGG | 0.506748 | 3.3:-66803156 | MS.gene022231:intron |
| ACCGTCCAATGTGGTTGCGT+CGG | 0.519517 | 3.3:-66806416 | MS.gene022231:CDS |
| GGCTGAGCATAGGAAGGAGC+TGG | 0.522874 | 3.3:-66803328 | MS.gene022231:CDS |
| GACCGGTGTGGAGGAGAAAA+GGG | 0.529132 | 3.3:-66806218 | MS.gene022231:CDS |
| CTGCGCCGACGCAACCACAT+TGG | 0.532875 | 3.3:+66806411 | None:intergenic |
| GCAAGCAGCTCTTCTAAATG+AGG | 0.535611 | 3.3:-66803066 | MS.gene022231:CDS |
| AGCTCCGTGTGAGGCTCAGA+TGG | 0.536186 | 3.3:-66805756 | MS.gene022231:CDS |
| GATATTTCATTGAGGAAGAC+CGG | 0.541804 | 3.3:-66806235 | MS.gene022231:CDS |
| GCAACAATGTGCCAACTATG+AGG | 0.550825 | 3.3:-66805681 | MS.gene022231:intron |
| CTTCTTAGAGTATCAAGGAT+GGG | 0.552403 | 3.3:+66803291 | None:intergenic |
| TACCCCAGAGATTAGCCATA+GGG | 0.553381 | 3.3:-66803364 | MS.gene022231:CDS |
| GGGTTTACCTGCAACTTCGA+AGG | 0.554455 | 3.3:+66806715 | None:intergenic |
| GTGAGGCTCAGATGGAAAGT+TGG | 0.555194 | 3.3:-66805748 | MS.gene022231:CDS |
| CAAGCAGCTCTTCTAAATGA+GGG | 0.558176 | 3.3:-66803065 | MS.gene022231:CDS |
| AGCATAGGAAGGAGCTGGAG+AGG | 0.563485 | 3.3:-66803323 | MS.gene022231:CDS |
| GAATCAGCGAAGTAAAAGAA+TGG | 0.564127 | 3.3:-66806748 | MS.gene022231:CDS |
| CCATGTCAACCAAAACCCTA+TGG | 0.565389 | 3.3:+66803349 | None:intergenic |
| ACCTTGGGATCTATATTCTG+CGG | 0.568417 | 3.3:+66806577 | None:intergenic |
| TGGTTGACATGGCTGAGCAT+AGG | 0.579448 | 3.3:-66803338 | MS.gene022231:CDS |
| GCAGACGAGGCTCAACCGTG+TGG | 0.588667 | 3.3:-66803391 | MS.gene022231:intron |
| AAGTTACCAAGATTTGCCTC+CGG | 0.589613 | 3.3:-66803271 | MS.gene022231:intron |
| GCCGCAGAATATAGATCCCA+AGG | 0.591800 | 3.3:-66806578 | MS.gene022231:intron |
| CTTTCCATCTGAGCCTCACA+CGG | 0.596528 | 3.3:+66805752 | None:intergenic |
| ACTTCTTAGAGTATCAAGGA+TGG | 0.600198 | 3.3:+66803290 | None:intergenic |
| GCCGACGCAACCACATTGGA+CGG | 0.603040 | 3.3:+66806415 | None:intergenic |
| GGAGACTGATGCTTCTTGAT+CGG | 0.607951 | 3.3:+66806784 | None:intergenic |
| ATTGAGGAAGACCGGTGTGG+AGG | 0.608171 | 3.3:-66806227 | MS.gene022231:CDS |
| ATACCCCAGAGATTAGCCAT+AGG | 0.609024 | 3.3:-66803365 | MS.gene022231:CDS |
| CTTTAGAGAGAGTAACGAGA+TGG | 0.609598 | 3.3:+66806648 | None:intergenic |
| GCTGATTCCAGAAACTTCTG+TGG | 0.613746 | 3.3:+66806763 | None:intergenic |
| TGACATGGCTGAGCATAGGA+AGG | 0.617304 | 3.3:-66803334 | MS.gene022231:CDS |
| CAATGGGTGATATTTCATTG+AGG | 0.630300 | 3.3:-66806243 | MS.gene022231:CDS |
| TTCAAGACGCTTCTCAGCAG+CGG | 0.631015 | 3.3:+66803097 | None:intergenic |
| CAGACGAGGCTCAACCGTGT+GGG | 0.631934 | 3.3:-66803390 | MS.gene022231:CDS |
| ATCACGAGCGACGAGACGAG+CGG | 0.645010 | 3.3:+66806613 | None:intergenic |
| GAGCAATTACTTGAATGTGA+TGG | 0.645492 | 3.3:-66805726 | MS.gene022231:CDS |
| TTCATTGAGGAAGACCGGTG+TGG | 0.650963 | 3.3:-66806230 | MS.gene022231:CDS |
| AACCCTATGGCTAATCTCTG+GGG | 0.660250 | 3.3:+66803362 | None:intergenic |
| ATACTAGAAAGGCTATTGCG+AGG | 0.667502 | 3.3:-66806159 | MS.gene022231:CDS |
| GGAGAGTTTACCGTCCAATG+TGG | 0.679839 | 3.3:-66806425 | MS.gene022231:CDS |
| AAGCAGCTCTTCTAAATGAG+GGG | 0.682093 | 3.3:-66803064 | MS.gene022231:CDS |
| AGATGAAGTAGCTCCGTGTG+AGG | 0.688922 | 3.3:-66805765 | MS.gene022231:CDS |
| TCTCTGGGGTATAGCCCACA+CGG | 0.692148 | 3.3:+66803376 | None:intergenic |
| TGCAAGTGAGAGACACTGCG+TGG | 0.791418 | 3.3:+66806671 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGGAAATATTAATTATTTT+AGG | - | chr3.3:66805917-66805936 | MS.gene022231:intron | 10.0% |
| !!! | GTATTGTTATTTTTATATAT+TGG | - | chr3.3:66806402-66806421 | MS.gene022231:CDS | 10.0% |
| !!! | TATTACTTTTTTATGAAATA+AGG | - | chr3.3:66805327-66805346 | MS.gene022231:intron | 10.0% |
| !!! | TGGAAATATTAATTATTTTA+GGG | - | chr3.3:66805918-66805937 | MS.gene022231:intron | 10.0% |
| !! | GTATATAAATAGGATAAATT+TGG | - | chr3.3:66804832-66804851 | MS.gene022231:intron | 15.0% |
| !! | TATTATTAATGAAATTCTCT+GGG | - | chr3.3:66804950-66804969 | MS.gene022231:intron | 15.0% |
| !!! | AAATGATGATAGTATTTTTT+AGG | - | chr3.3:66805204-66805223 | MS.gene022231:intron | 15.0% |
| !!! | AATGAATTTTATCACAAAAT+TGG | - | chr3.3:66805753-66805772 | MS.gene022231:CDS | 15.0% |
| !!! | ATGAATTTTATCACAAAATT+GGG | - | chr3.3:66805754-66805773 | MS.gene022231:CDS | 15.0% |
| !!! | TTTTGTGATAAAATTCATTT+TGG | + | chr3.3:66805752-66805771 | None:intergenic | 15.0% |
| !!! | TTTTGTTATTTCAATATTCT+AGG | + | chr3.3:66804409-66804428 | None:intergenic | 15.0% |
| !! | AAGAATATCATAACATAGAT+TGG | + | chr3.3:66806137-66806156 | None:intergenic | 20.0% |
| !! | AAGATCATCAAACATAAAAA+AGG | - | chr3.3:66805522-66805541 | MS.gene022231:intron | 20.0% |
| !! | AGAATATCATAACATAGATT+GGG | + | chr3.3:66806136-66806155 | None:intergenic | 20.0% |
| !! | AGATCATCAAACATAAAAAA+GGG | - | chr3.3:66805523-66805542 | MS.gene022231:intron | 20.0% |
| !! | ATAAATAGGATAAATTTGGA+TGG | - | chr3.3:66804836-66804855 | MS.gene022231:intron | 20.0% |
| !! | ATTTAGAAAATTTGTGTAGA+AGG | - | chr3.3:66804883-66804902 | MS.gene022231:intron | 20.0% |
| !! | GAGAATTTCATTAATAATAC+TGG | + | chr3.3:66804949-66804968 | None:intergenic | 20.0% |
| !! | GTAAAAATGTAAAATGAATG+TGG | - | chr3.3:66803908-66803927 | MS.gene022231:intron | 20.0% |
| !! | GTATTATTAATGAAATTCTC+TGG | - | chr3.3:66804949-66804968 | MS.gene022231:intron | 20.0% |
| !! | TAGCAATTGAAGATAAAAAA+AGG | - | chr3.3:66806722-66806741 | MS.gene022231:CDS | 20.0% |
| !! | TCTTAATTGAAAACAATTCT+GGG | + | chr3.3:66804775-66804794 | None:intergenic | 20.0% |
| !! | TGAATTTGATGTTAGATAAA+AGG | - | chr3.3:66804282-66804301 | MS.gene022231:intron | 20.0% |
| !! | TTAACATATTTGAAAAGGTA+TGG | - | chr3.3:66803713-66803732 | MS.gene022231:intron | 20.0% |
| !! | TTCTTAATTGAAAACAATTC+TGG | + | chr3.3:66804776-66804795 | None:intergenic | 20.0% |
| !!! | AAAGTTTGAATTTTGGAATT+GGG | - | chr3.3:66803562-66803581 | MS.gene022231:intron | 20.0% |
| !!! | AATTTAATTTGTCCAATCAA+AGG | + | chr3.3:66805845-66805864 | None:intergenic | 20.0% |
| !!! | ACTTGAATTTGACAATTTTA+AGG | + | chr3.3:66805436-66805455 | None:intergenic | 20.0% |
| !!! | ATTTTAGCTGTAATTTTTGT+CGG | - | chr3.3:66804579-66804598 | MS.gene022231:intron | 20.0% |
| !!! | GATTAATACTTGTTAATGTT+CGG | - | chr3.3:66805467-66805486 | MS.gene022231:intron | 20.0% |
| !!! | TAAAGTTTGAATTTTGGAAT+TGG | - | chr3.3:66803561-66803580 | MS.gene022231:intron | 20.0% |
| !!! | TGAATTTTATCACAAAATTG+GGG | - | chr3.3:66805755-66805774 | MS.gene022231:CDS | 20.0% |
| !!! | TGGTTTTGAACTAAAAATTT+AGG | - | chr3.3:66803733-66803752 | MS.gene022231:intron | 20.0% |
| !!! | TTTTTTATCTTCAATTGCTA+AGG | + | chr3.3:66806722-66806741 | None:intergenic | 20.0% |
| ! | AAATAAACTAACCTCATAGT+TGG | + | chr3.3:66804182-66804201 | None:intergenic | 25.0% |
| ! | AATCAAGAAAGAATGAGATT+TGG | - | chr3.3:66805234-66805253 | MS.gene022231:intron | 25.0% |
| ! | ACGGATAACATATTATAAAC+TGG | - | chr3.3:66806353-66806372 | MS.gene022231:intron | 25.0% |
| ! | AGCTGTAAAAATTAATACTG+TGG | - | chr3.3:66803807-66803826 | MS.gene022231:intron | 25.0% |
| ! | ATAATAGATTGTAACACATG+TGG | + | chr3.3:66805310-66805329 | None:intergenic | 25.0% |
| ! | ATCAAGAAAGAATGAGATTT+GGG | - | chr3.3:66805235-66805254 | MS.gene022231:intron | 25.0% |
| ! | ATCATCAAACATAAAAAAGG+GGG | - | chr3.3:66805525-66805544 | MS.gene022231:intron | 25.0% |
| ! | ATGCAATAAAACCAGTTTAA+TGG | + | chr3.3:66804383-66804402 | None:intergenic | 25.0% |
| ! | CAAGAGATATAGTTAGAAAA+AGG | - | chr3.3:66804326-66804345 | MS.gene022231:intron | 25.0% |
| ! | GATCATCAAACATAAAAAAG+GGG | - | chr3.3:66805524-66805543 | MS.gene022231:intron | 25.0% |
| ! | GCATGAAAAATATGAAATAC+CGG | + | chr3.3:66806600-66806619 | None:intergenic | 25.0% |
| ! | TAATAGATTGTAACACATGT+GGG | + | chr3.3:66805309-66805328 | None:intergenic | 25.0% |
| ! | TAGTCAAATTAAAACTGTCT+AGG | + | chr3.3:66803947-66803966 | None:intergenic | 25.0% |
| ! | TCAGTGTCTATCTTATAAAT+GGG | + | chr3.3:66805085-66805104 | None:intergenic | 25.0% |
| ! | TGCAATAAAACCAGTTTAAT+GGG | + | chr3.3:66804382-66804401 | None:intergenic | 25.0% |
| !! | CTGTGTTAAAGTTTGAATTT+TGG | - | chr3.3:66803555-66803574 | MS.gene022231:intron | 25.0% |
| !! | TTTATGTTTGATGATCTTGA+TGG | + | chr3.3:66805520-66805539 | None:intergenic | 25.0% |
| !!! | AGGTTAGTTTATTTGTTTTG+AGG | - | chr3.3:66804188-66804207 | MS.gene022231:intron | 25.0% |
| !!! | CTTTCTATTTGTTTTAGTTC+TGG | - | chr3.3:66806619-66806638 | MS.gene022231:CDS | 25.0% |
| !!! | GGTTAGTTTATTTGTTTTGA+GGG | - | chr3.3:66804189-66804208 | MS.gene022231:intron | 25.0% |
| !!! | GTGATAAAATTCATTTTGGT+AGG | + | chr3.3:66805748-66805767 | None:intergenic | 25.0% |
| !!! | GTTAGTTTATTTGTTTTGAG+GGG | - | chr3.3:66804190-66804209 | MS.gene022231:intron | 25.0% |
| !!! | TAATTATTTTAGGGTCTGTT+CGG | - | chr3.3:66805927-66805946 | MS.gene022231:intron | 25.0% |
| !!! | TTAAGAGAGTCAGTTTTTTT+TGG | + | chr3.3:66806245-66806264 | None:intergenic | 25.0% |
| !!! | TTAGTTTATTTGTTTTGAGG+GGG | - | chr3.3:66804191-66804210 | MS.gene022231:intron | 25.0% |
| !!! | TTTAGCATTGATACATAACT+TGG | - | chr3.3:66803768-66803787 | MS.gene022231:intron | 25.0% |
| AAACTACAATAATGTGCTCA+AGG | - | chr3.3:66803971-66803990 | MS.gene022231:intron | 30.0% | |
| AAAGAATGAGATTTGGGAAT+TGG | - | chr3.3:66805241-66805260 | MS.gene022231:intron | 30.0% | |
| AACTACAATAATGTGCTCAA+GGG | - | chr3.3:66803972-66803991 | MS.gene022231:intron | 30.0% | |
| AAGGAGTAAATTTGATTCTG+AGG | - | chr3.3:66805375-66805394 | MS.gene022231:intron | 30.0% | |
| AATAAGGAAATGTTGTTCAG+TGG | - | chr3.3:66805343-66805362 | MS.gene022231:intron | 30.0% | |
| AATAGATTGTAACACATGTG+GGG | + | chr3.3:66805308-66805327 | None:intergenic | 30.0% | |
| AGAACACATAGAATTGAAGT+GGG | - | chr3.3:66804994-66805013 | MS.gene022231:intron | 30.0% | |
| AGAAGGATGTTAAGTAAATC+AGG | - | chr3.3:66804900-66804919 | MS.gene022231:intron | 30.0% | |
| AGATTTGGGAATTGGAAATT+GGG | - | chr3.3:66805249-66805268 | MS.gene022231:intron | 30.0% | |
| AGGAGTAAATTTGATTCTGA+GGG | - | chr3.3:66805376-66805395 | MS.gene022231:intron | 30.0% | |
| AGTTAGAAAAAGGACAGAAA+AGG | - | chr3.3:66804336-66804355 | MS.gene022231:intron | 30.0% | |
| ATAAGGAAATGTTGTTCAGT+GGG | - | chr3.3:66805344-66805363 | MS.gene022231:intron | 30.0% | |
| ATGTTAGATAAAAGGCTGTA+GGG | - | chr3.3:66804290-66804309 | MS.gene022231:intron | 30.0% | |
| ATGTTCGGTATAAAATTCTC+AGG | - | chr3.3:66805482-66805501 | MS.gene022231:intron | 30.0% | |
| ATTATCACCAATTAGGGTTA+GGG | - | chr3.3:66803310-66803329 | MS.gene022231:CDS | 30.0% | |
| CAAAGACTAAGAGTCAATTT+GGG | + | chr3.3:66806333-66806352 | None:intergenic | 30.0% | |
| CGAGGTTAACATATTTGAAA+AGG | - | chr3.3:66803708-66803727 | MS.gene022231:intron | 30.0% | |
| CTTGAACAAGAGAAACAAAA+AGG | - | chr3.3:66804433-66804452 | MS.gene022231:intron | 30.0% | |
| GGGTAAAAGATCATAAAGTT+TGG | - | chr3.3:66805269-66805288 | MS.gene022231:intron | 30.0% | |
| GTCAGTGTCTATCTTATAAA+TGG | + | chr3.3:66805086-66805105 | None:intergenic | 30.0% | |
| TAAGAGATACTGAACTTAGT+AGG | - | chr3.3:66803492-66803511 | MS.gene022231:intron | 30.0% | |
| TACTATCATCATTTCGTCAA+TGG | + | chr3.3:66805198-66805217 | None:intergenic | 30.0% | |
| TAGAACACATAGAATTGAAG+TGG | - | chr3.3:66804993-66805012 | MS.gene022231:intron | 30.0% | |
| TATCATTCTCTACAAATGAC+AGG | - | chr3.3:66806194-66806213 | MS.gene022231:CDS | 30.0% | |
| TCAAAGACTAAGAGTCAATT+TGG | + | chr3.3:66806334-66806353 | None:intergenic | 30.0% | |
| TCATCAAACATAAAAAAGGG+GGG | - | chr3.3:66805526-66805545 | MS.gene022231:intron | 30.0% | |
| TCTTCTCGATTATACTAGAA+AGG | - | chr3.3:66803679-66803698 | MS.gene022231:intron | 30.0% | |
| TGAAAAATATGAAATACCGG+AGG | + | chr3.3:66806597-66806616 | None:intergenic | 30.0% | |
| TGGAAGAAATTGAAGAATCT+GGG | - | chr3.3:66805996-66806015 | MS.gene022231:intron | 30.0% | |
| TGTAAAATGAATGTGGAACT+TGG | - | chr3.3:66803915-66803934 | MS.gene022231:intron | 30.0% | |
| TTTCGTATAGCAATTCAGTT+TGG | + | chr3.3:66804617-66804636 | None:intergenic | 30.0% | |
| ! | AATTGACTCTTAGTCTTTGA+CGG | - | chr3.3:66806334-66806353 | MS.gene022231:intron | 30.0% |
| ! | GAGCACATTATTGTAGTTTT+TGG | + | chr3.3:66803970-66803989 | None:intergenic | 30.0% |
| ! | TAACCCTAATTGGTGATAAT+GGG | + | chr3.3:66803310-66803329 | None:intergenic | 30.0% |
| !! | ATAATACTGGCTCTATTCAA+TGG | + | chr3.3:66804936-66804955 | None:intergenic | 30.0% |
| !! | GATCTTGATGGATTAAAGAT+AGG | + | chr3.3:66805508-66805527 | None:intergenic | 30.0% |
| !!! | AATTATTTTAGGGTCTGTTC+GGG | - | chr3.3:66805928-66805947 | MS.gene022231:intron | 30.0% |
| !!! | GGTTTTTTTTAGCTTTCTTG+TGG | - | chr3.3:66803583-66803602 | MS.gene022231:intron | 30.0% |
| !!! | TAGTTTATTTGTTTTGAGGG+GGG | - | chr3.3:66804192-66804211 | MS.gene022231:intron | 30.0% |
| AAAAAGGACAGAAAAGGAAG+CGG | - | chr3.3:66804342-66804361 | MS.gene022231:intron | 35.0% | |
| AACCACAGTATAGAATCTCA+TGG | - | chr3.3:66805898-66805917 | MS.gene022231:intron | 35.0% | |
| AACCTACATTTGCTCAAGAT+TGG | - | chr3.3:66805408-66805427 | MS.gene022231:intron | 35.0% | |
| AATTTGTCCAATCAAAGGTG+AGG | + | chr3.3:66805840-66805859 | None:intergenic | 35.0% | |
| ACTACAATAATGTGCTCAAG+GGG | - | chr3.3:66803973-66803992 | MS.gene022231:intron | 35.0% | |
| ACTCCCATTATCACCAATTA+GGG | - | chr3.3:66803304-66803323 | MS.gene022231:CDS | 35.0% | |
| AGAGAAGCTAAGTAGTTAGA+GGG | - | chr3.3:66804801-66804820 | MS.gene022231:intron | 35.0% | |
| AGATACTGAACTTAGTAGGT+GGG | - | chr3.3:66803496-66803515 | MS.gene022231:intron | 35.0% | |
| AGATTATTCAGAATCTCAGC+AGG | - | chr3.3:66805874-66805893 | MS.gene022231:intron | 35.0% | |
| AGCTACTTCATCTTCCAATT+GGG | + | chr3.3:66804077-66804096 | None:intergenic | 35.0% | |
| AGTCAATTTGGGAGATTGAA+GGG | + | chr3.3:66806322-66806341 | None:intergenic | 35.0% | |
| CAATGGGTGATATTTCATTG+AGG | - | chr3.3:66803606-66803625 | MS.gene022231:intron | 35.0% | |
| CATCAAACATAAAAAAGGGG+GGG | - | chr3.3:66805527-66805546 | MS.gene022231:intron | 35.0% | |
| CATTATCACCAATTAGGGTT+AGG | - | chr3.3:66803309-66803328 | MS.gene022231:CDS | 35.0% | |
| CGATTCATACTAAACTAGTG+AGG | + | chr3.3:66804034-66804053 | None:intergenic | 35.0% | |
| GAAAACAATTCTGGGTAAAC+TGG | + | chr3.3:66804767-66804786 | None:intergenic | 35.0% | |
| GAACTCAAAAAATGTACTGG+AGG | - | chr3.3:66806077-66806096 | MS.gene022231:intron | 35.0% | |
| GAATCAGCGAAGTAAAAGAA+TGG | - | chr3.3:66803101-66803120 | MS.gene022231:CDS | 35.0% | |
| GAGATTTGGGAATTGGAAAT+TGG | - | chr3.3:66805248-66805267 | MS.gene022231:intron | 35.0% | |
| GAGCAATTACTTGAATGTGA+TGG | - | chr3.3:66804123-66804142 | MS.gene022231:intron | 35.0% | |
| GATATTTCATTGAGGAAGAC+CGG | - | chr3.3:66803614-66803633 | MS.gene022231:intron | 35.0% | |
| GATGTTAGATAAAAGGCTGT+AGG | - | chr3.3:66804289-66804308 | MS.gene022231:intron | 35.0% | |
| GGAGGGTCATGTATATAAAT+AGG | - | chr3.3:66804822-66804841 | MS.gene022231:intron | 35.0% | |
| GGATAAATTTGGATGGAAGA+AGG | - | chr3.3:66804843-66804862 | MS.gene022231:intron | 35.0% | |
| GTCTATCTTATAAATGGGAG+AGG | + | chr3.3:66805080-66805099 | None:intergenic | 35.0% | |
| GTGGAAGAAATTGAAGAATC+TGG | - | chr3.3:66805995-66806014 | MS.gene022231:intron | 35.0% | |
| TAAGGAAATGTTGTTCAGTG+GGG | - | chr3.3:66805345-66805364 | MS.gene022231:intron | 35.0% | |
| TAGAGAAGCTAAGTAGTTAG+AGG | - | chr3.3:66804800-66804819 | MS.gene022231:intron | 35.0% | |
| TATTTCGTAGCATGCAGATT+TGG | + | chr3.3:66805673-66805692 | None:intergenic | 35.0% | |
| TCAAAAAATGTACTGGAGGA+GGG | - | chr3.3:66806081-66806100 | MS.gene022231:intron | 35.0% | |
| TTATCCTGTACCCATTAAAC+TGG | - | chr3.3:66804369-66804388 | MS.gene022231:intron | 35.0% | |
| TTCCATGAGATTCTATACTG+TGG | + | chr3.3:66805903-66805922 | None:intergenic | 35.0% | |
| TTCTATGTGTTCTATCTCAG+CGG | + | chr3.3:66804987-66805006 | None:intergenic | 35.0% | |
| TTCTCTACAAATGACAGGTT+CGG | - | chr3.3:66806199-66806218 | MS.gene022231:CDS | 35.0% | |
| TTGTTAGGGTAAAGGAATGA+GGG | - | chr3.3:66804724-66804743 | MS.gene022231:intron | 35.0% | |
| ! | AAAACCAGTTTAATGGGTAC+AGG | + | chr3.3:66804376-66804395 | None:intergenic | 35.0% |
| ! | ACTTCTTAGAGTATCAAGGA+TGG | + | chr3.3:66806562-66806581 | None:intergenic | 35.0% |
| ! | CTAACCCTAATTGGTGATAA+TGG | + | chr3.3:66803311-66803330 | None:intergenic | 35.0% |
| ! | CTGTAATTTTTGTCGGATGA+TGG | - | chr3.3:66804586-66804605 | MS.gene022231:intron | 35.0% |
| ! | CTTCTTAGAGTATCAAGGAT+GGG | + | chr3.3:66806561-66806580 | None:intergenic | 35.0% |
| ! | GGTAACTTCTTAGAGTATCA+AGG | + | chr3.3:66806566-66806585 | None:intergenic | 35.0% |
| !! | GGAGTAGGTGTTATTCAATT+TGG | - | chr3.3:66804213-66804232 | MS.gene022231:intron | 35.0% |
| !! | TTTAGCTTTCTTGTGGCAAT+GGG | - | chr3.3:66803590-66803609 | MS.gene022231:intron | 35.0% |
| !!! | AGAGAGTCAGTTTTTTTTGG+TGG | + | chr3.3:66806242-66806261 | None:intergenic | 35.0% |
| !!! | TTTTAGCTTTCTTGTGGCAA+TGG | - | chr3.3:66803589-66803608 | MS.gene022231:intron | 35.0% |
| AAAACCCTATGGCTAATCTC+TGG | + | chr3.3:66806492-66806511 | None:intergenic | 40.0% | |
| AAACCCTATGGCTAATCTCT+GGG | + | chr3.3:66806491-66806510 | None:intergenic | 40.0% | |
| AAATTGGGGAGTAAACATGC+AGG | - | chr3.3:66805769-66805788 | MS.gene022231:CDS | 40.0% | |
| AAGCAGCTCTTCTAAATGAG+GGG | - | chr3.3:66806785-66806804 | MS.gene022231:CDS | 40.0% | |
| AAGCTAAGTAGTTAGAGGGA+GGG | - | chr3.3:66804805-66804824 | MS.gene022231:intron | 40.0% | |
| AAGGAAATGTTGTTCAGTGG+GGG | - | chr3.3:66805346-66805365 | MS.gene022231:intron | 40.0% | |
| AAGTTACCAAGATTTGCCTC+CGG | - | chr3.3:66806578-66806597 | MS.gene022231:intron | 40.0% | |
| ACAAAAGCCCAGAAGTTTCT+TGG | - | chr3.3:66805127-66805146 | MS.gene022231:intron | 40.0% | |
| ACAATTCTGGGTAAACTGGT+TGG | + | chr3.3:66804763-66804782 | None:intergenic | 40.0% | |
| ACCAATTAGGGTTAGGGTTA+AGG | - | chr3.3:66803316-66803335 | MS.gene022231:CDS | 40.0% | |
| ACCTTAACCCTAACCCTAAT+TGG | + | chr3.3:66803320-66803339 | None:intergenic | 40.0% | |
| ACCTTGGGATCTATATTCTG+CGG | + | chr3.3:66803275-66803294 | None:intergenic | 40.0% | |
| ACTTGTATCATGCAAGACTG+TGG | - | chr3.3:66804520-66804539 | MS.gene022231:intron | 40.0% | |
| AGCCAATCTTGAGCAAATGT+AGG | + | chr3.3:66805413-66805432 | None:intergenic | 40.0% | |
| ATACTAGAAAGGCTATTGCG+AGG | - | chr3.3:66803690-66803709 | MS.gene022231:intron | 40.0% | |
| ATCTATATTCTGCGGCTTTG+AGG | + | chr3.3:66803267-66803286 | None:intergenic | 40.0% | |
| CAAAAGCCCAGAAGTTTCTT+GGG | - | chr3.3:66805128-66805147 | MS.gene022231:intron | 40.0% | |
| CAAGCAGCTCTTCTAAATGA+GGG | - | chr3.3:66806784-66806803 | MS.gene022231:CDS | 40.0% | |
| CACTCCCATTATCACCAATT+AGG | - | chr3.3:66803303-66803322 | MS.gene022231:CDS | 40.0% | |
| CTACAATAATGTGCTCAAGG+GGG | - | chr3.3:66803974-66803993 | MS.gene022231:intron | 40.0% | |
| CTCAAAAAATGTACTGGAGG+AGG | - | chr3.3:66806080-66806099 | MS.gene022231:intron | 40.0% | |
| CTTATAAATGGGAGAGGAAC+AGG | + | chr3.3:66805074-66805093 | None:intergenic | 40.0% | |
| GAAAAGGGCTAAAGTGCATA+AGG | - | chr3.3:66803646-66803665 | MS.gene022231:intron | 40.0% | |
| GAAATTGAAGAATCTGGGAG+AGG | - | chr3.3:66806001-66806020 | MS.gene022231:intron | 40.0% | |
| GAGAAAAAGGAAGGAGAAAG+TGG | - | chr3.3:66805976-66805995 | MS.gene022231:intron | 40.0% | |
| GAGATACTGAACTTAGTAGG+TGG | - | chr3.3:66803495-66803514 | MS.gene022231:intron | 40.0% | |
| GAGCTACTTCATCTTCCAAT+TGG | + | chr3.3:66804078-66804097 | None:intergenic | 40.0% | |
| GAGTCAATTTGGGAGATTGA+AGG | + | chr3.3:66806323-66806342 | None:intergenic | 40.0% | |
| GATTATCCAGGATAAAGCTC+TGG | - | chr3.3:66806693-66806712 | MS.gene022231:CDS | 40.0% | |
| GGGAGTGATTATCTTACCTT+GGG | + | chr3.3:66803290-66803309 | None:intergenic | 40.0% | |
| GGGGAACTCAAAAAATGTAC+TGG | - | chr3.3:66806074-66806093 | MS.gene022231:intron | 40.0% | |
| GTCAATTTGGGAGATTGAAG+GGG | + | chr3.3:66806321-66806340 | None:intergenic | 40.0% | |
| GTTGTTAGGGTAAAGGAATG+AGG | - | chr3.3:66804723-66804742 | MS.gene022231:intron | 40.0% | |
| TCCTGGATAATCCAAACACA+CGG | + | chr3.3:66806685-66806704 | None:intergenic | 40.0% | |
| TCTCTACAAATGACAGGTTC+GGG | - | chr3.3:66806200-66806219 | MS.gene022231:CDS | 40.0% | |
| TGAATTGACGATTCCCTTCA+TGG | - | chr3.3:66804698-66804717 | MS.gene022231:intron | 40.0% | |
| TGATAACTCAAAACCCCCTA+CGG | - | chr3.3:66806049-66806068 | MS.gene022231:intron | 40.0% | |
| TGCAAGGATTAGAGAGATTC+TGG | - | chr3.3:66803382-66803401 | MS.gene022231:CDS | 40.0% | |
| TGCAGAATTGACTGTTACCA+TGG | - | chr3.3:66805021-66805040 | MS.gene022231:intron | 40.0% | |
| TGGGAGTGATTATCTTACCT+TGG | + | chr3.3:66803291-66803310 | None:intergenic | 40.0% | |
| TGTGTATTCGAATTCGGGAA+CGG | + | chr3.3:66803158-66803177 | None:intergenic | 40.0% | |
| TTAGGGTTAGGGTTAAGGTT+TGG | - | chr3.3:66803321-66803340 | MS.gene022231:CDS | 40.0% | |
| ! | AATAACATTTGCTGCAGACG+AGG | - | chr3.3:66806445-66806464 | MS.gene022231:CDS | 40.0% |
| ! | AGAGAGATTCTGGAGAATGT+AGG | - | chr3.3:66803392-66803411 | MS.gene022231:intron | 40.0% |
| ! | CTTTAGAGAGAGTAACGAGA+TGG | + | chr3.3:66803204-66803223 | None:intergenic | 40.0% |
| ! | GATTCTGGAGAATGTAGGTT+TGG | - | chr3.3:66803397-66803416 | MS.gene022231:intron | 40.0% |
| ! | GATTTTGCATTGTAGCTGCA+AGG | - | chr3.3:66803366-66803385 | MS.gene022231:CDS | 40.0% |
| ! | TTACATTTTGCCCGTGTGTT+TGG | - | chr3.3:66806671-66806690 | MS.gene022231:CDS | 40.0% |
| !! | ACCATGGTTATCGATTTGAC+AGG | - | chr3.3:66805037-66805056 | MS.gene022231:intron | 40.0% |
| !! | AGAGATTAGCCATAGGGTTT+TGG | - | chr3.3:66806491-66806510 | MS.gene022231:intron | 40.0% |
| !! | CCATGGTTATCGATTTGACA+GGG | - | chr3.3:66805038-66805057 | MS.gene022231:intron | 40.0% |
| !!! | GAGTCAGTTTTTTTTGGTGG+TGG | + | chr3.3:66806239-66806258 | None:intergenic | 40.0% |
| AACCCTATGGCTAATCTCTG+GGG | + | chr3.3:66806490-66806509 | None:intergenic | 45.0% | |
| AATTTGGGAGATTGAAGGGG+AGG | + | chr3.3:66806318-66806337 | None:intergenic | 45.0% | |
| ACACTGCCCAAGAAACTTCT+GGG | + | chr3.3:66805137-66805156 | None:intergenic | 45.0% | |
| ACCCTAACAACCTCCATGAA+GGG | + | chr3.3:66804714-66804733 | None:intergenic | 45.0% | |
| AGGAAATGTTGTTCAGTGGG+GGG | - | chr3.3:66805347-66805366 | MS.gene022231:intron | 45.0% | |
| AGGAGGGGATTAGAGGAAAA+GGG | + | chr3.3:66806286-66806305 | None:intergenic | 45.0% | |
| ATTGAAGAATCTGGGAGAGG+AGG | - | chr3.3:66806004-66806023 | MS.gene022231:intron | 45.0% | |
| ATTGACGATTCCCTTCATGG+AGG | - | chr3.3:66804701-66804720 | MS.gene022231:intron | 45.0% | |
| ATTTGGGAGATTGAAGGGGA+GGG | + | chr3.3:66806317-66806336 | None:intergenic | 45.0% | |
| CATGGAGGTTGTTAGGGTAA+AGG | - | chr3.3:66804716-66804735 | MS.gene022231:intron | 45.0% | |
| CATTACGCCTCACCTTTGAT+TGG | - | chr3.3:66805830-66805849 | MS.gene022231:intron | 45.0% | |
| CCATGTCAACCAAAACCCTA+TGG | + | chr3.3:66806503-66806522 | None:intergenic | 45.0% | |
| CCCTGTCAAATCGATAACCA+TGG | + | chr3.3:66805041-66805060 | None:intergenic | 45.0% | |
| CCTGGATAATCCAAACACAC+GGG | + | chr3.3:66806684-66806703 | None:intergenic | 45.0% | |
| CGTGGTGTGTATTCGAATTC+GGG | + | chr3.3:66803163-66803182 | None:intergenic | 45.0% | |
| CTCTACAAATGACAGGTTCG+GGG | - | chr3.3:66806201-66806220 | MS.gene022231:CDS | 45.0% | |
| GAAATACCGGAGGCAAATCT+TGG | + | chr3.3:66806587-66806606 | None:intergenic | 45.0% | |
| GAAGCTAAGTAGTTAGAGGG+AGG | - | chr3.3:66804804-66804823 | MS.gene022231:intron | 45.0% | |
| GAGGGTTTGGAGAAAAAGGA+AGG | - | chr3.3:66805967-66805986 | MS.gene022231:intron | 45.0% | |
| GCAACAATGTGCCAACTATG+AGG | - | chr3.3:66804168-66804187 | MS.gene022231:intron | 45.0% | |
| GCAAGCAGCTCTTCTAAATG+AGG | - | chr3.3:66806783-66806802 | MS.gene022231:CDS | 45.0% | |
| GCGTGGTGTGTATTCGAATT+CGG | + | chr3.3:66803164-66803183 | None:intergenic | 45.0% | |
| GGAGACTGATGCTTCTTGAT+CGG | + | chr3.3:66803068-66803087 | None:intergenic | 45.0% | |
| GTGGTAGATACACTGCAATG+TGG | - | chr3.3:66804539-66804558 | MS.gene022231:intron | 45.0% | |
| GTGTATTCGAATTCGGGAAC+GGG | + | chr3.3:66803157-66803176 | None:intergenic | 45.0% | |
| TAACACATGTGGGGTGATGT+GGG | + | chr3.3:66805299-66805318 | None:intergenic | 45.0% | |
| TACCCTAACAACCTCCATGA+AGG | + | chr3.3:66804715-66804734 | None:intergenic | 45.0% | |
| TCAGTCTCCACAGAAGTTTC+TGG | - | chr3.3:66803079-66803098 | MS.gene022231:CDS | 45.0% | |
| TCCAAAACCTTCGAAGTTGC+AGG | - | chr3.3:66803127-66803146 | MS.gene022231:CDS | 45.0% | |
| TCCCTTCATGGAGGTTGTTA+GGG | - | chr3.3:66804710-66804729 | MS.gene022231:intron | 45.0% | |
| TTCCCTTCATGGAGGTTGTT+AGG | - | chr3.3:66804709-66804728 | MS.gene022231:intron | 45.0% | |
| TTGAAGAATCTGGGAGAGGA+GGG | - | chr3.3:66806005-66806024 | MS.gene022231:intron | 45.0% | |
| TTGAGAGCGACGCGAAAAAT+GGG | - | chr3.3:66804255-66804274 | MS.gene022231:intron | 45.0% | |
| TTTGAGAGCGACGCGAAAAA+TGG | - | chr3.3:66804254-66804273 | MS.gene022231:intron | 45.0% | |
| ! | AATGTACTGGAGGAGGGTTT+TGG | - | chr3.3:66806087-66806106 | MS.gene022231:intron | 45.0% |
| ! | ACCTGCAACTTCGAAGGTTT+TGG | + | chr3.3:66803131-66803150 | None:intergenic | 45.0% |
| ! | ATACCCCAGAGATTAGCCAT+AGG | - | chr3.3:66806484-66806503 | MS.gene022231:intron | 45.0% |
| ! | ATGTACTGGAGGAGGGTTTT+GGG | - | chr3.3:66806088-66806107 | MS.gene022231:intron | 45.0% |
| ! | GCTGATTCCAGAAACTTCTG+TGG | + | chr3.3:66803089-66803108 | None:intergenic | 45.0% |
| ! | TACCCCAGAGATTAGCCATA+GGG | - | chr3.3:66806485-66806504 | MS.gene022231:intron | 45.0% |
| !!! | AGTTTTTTTTGGTGGTGGCC+GGG | + | chr3.3:66806234-66806253 | None:intergenic | 45.0% |
| !!! | ATTTGTTTTGAGGGGGGAGT+AGG | - | chr3.3:66804198-66804217 | MS.gene022231:intron | 45.0% |
| !!! | CAGTTTTTTTTGGTGGTGGC+CGG | + | chr3.3:66806235-66806254 | None:intergenic | 45.0% |
| !!! | CCATAGGGTTTTGGTTGACA+TGG | - | chr3.3:66806500-66806519 | MS.gene022231:intron | 45.0% |
| !!! | TTTTGAGTTCCCCTACCGTA+GGG | + | chr3.3:66806067-66806086 | None:intergenic | 45.0% |
| !!! | TTTTTGAGTTCCCCTACCGT+AGG | + | chr3.3:66806068-66806087 | None:intergenic | 45.0% |
| AACTCAAAACCCCCTACGGT+AGG | - | chr3.3:66806053-66806072 | MS.gene022231:intron | 50.0% | |
| ACTCAAAACCCCCTACGGTA+GGG | - | chr3.3:66806054-66806073 | MS.gene022231:intron | 50.0% | |
| AGATGAAGTAGCTCCGTGTG+AGG | - | chr3.3:66804084-66804103 | MS.gene022231:intron | 50.0% | |
| AGGGGAGGGTTTGGAGAAAA+AGG | - | chr3.3:66805963-66805982 | MS.gene022231:intron | 50.0% | |
| CCCGTGTGTTTGGATTATCC+AGG | - | chr3.3:66806681-66806700 | MS.gene022231:CDS | 50.0% | |
| CTTTCCATCTGAGCCTCACA+CGG | + | chr3.3:66804100-66804119 | None:intergenic | 50.0% | |
| GACACTGCCCAAGAAACTTC+TGG | + | chr3.3:66805138-66805157 | None:intergenic | 50.0% | |
| GAGGAGGGGATTAGAGGAAA+AGG | + | chr3.3:66806287-66806306 | None:intergenic | 50.0% | |
| GCCGCAGAATATAGATCCCA+AGG | - | chr3.3:66803271-66803290 | MS.gene022231:intron | 50.0% | |
| GGAGAGTTTACCGTCCAATG+TGG | - | chr3.3:66803424-66803443 | MS.gene022231:intron | 50.0% | |
| GGGTTTACCTGCAACTTCGA+AGG | + | chr3.3:66803137-66803156 | None:intergenic | 50.0% | |
| GTAACACATGTGGGGTGATG+TGG | + | chr3.3:66805300-66805319 | None:intergenic | 50.0% | |
| GTGAGGCTCAGATGGAAAGT+TGG | - | chr3.3:66804101-66804120 | MS.gene022231:intron | 50.0% | |
| GTGCAGAACACTAGCCCAAT+TGG | - | chr3.3:66804060-66804079 | MS.gene022231:intron | 50.0% | |
| TGACATGGCTGAGCATAGGA+AGG | - | chr3.3:66806515-66806534 | MS.gene022231:intron | 50.0% | |
| TGGTTGACATGGCTGAGCAT+AGG | - | chr3.3:66806511-66806530 | MS.gene022231:intron | 50.0% | |
| TTAGGGTCTGTTCGGGAGAT+TGG | - | chr3.3:66805935-66805954 | MS.gene022231:intron | 50.0% | |
| TTCAAGACGCTTCTCAGCAG+CGG | + | chr3.3:66806755-66806774 | None:intergenic | 50.0% | |
| TTCATTGAGGAAGACCGGTG+TGG | - | chr3.3:66803619-66803638 | MS.gene022231:intron | 50.0% | |
| TTTGGGAGATTGAAGGGGAG+GGG | + | chr3.3:66806316-66806335 | None:intergenic | 50.0% | |
| ! | GGAGAATGTAGGTTTGGCTC+AGG | - | chr3.3:66803403-66803422 | MS.gene022231:intron | 50.0% |
| ! | TTTGAGTTCCCCTACCGTAG+GGG | + | chr3.3:66806066-66806085 | None:intergenic | 50.0% |
| !!! | GTTTTTTTTGGTGGTGGCCG+GGG | + | chr3.3:66806233-66806252 | None:intergenic | 50.0% |
| ACAGGAGAGGAGGGGATTAG+AGG | + | chr3.3:66806293-66806312 | None:intergenic | 55.0% | |
| ACCGTCCAATGTGGTTGCGT+CGG | - | chr3.3:66803433-66803452 | MS.gene022231:intron | 55.0% | |
| AGACCGGTGTGGAGGAGAAA+AGG | - | chr3.3:66803630-66803649 | MS.gene022231:intron | 55.0% | |
| AGCATAGGAAGGAGCTGGAG+AGG | - | chr3.3:66806526-66806545 | MS.gene022231:intron | 55.0% | |
| ATCTGGGAGAGGAGGGCTTT+AGG | - | chr3.3:66806012-66806031 | MS.gene022231:intron | 55.0% | |
| ATTGAGGAAGACCGGTGTGG+AGG | - | chr3.3:66803622-66803641 | MS.gene022231:intron | 55.0% | |
| CTCAAAACCCCCTACGGTAG+GGG | - | chr3.3:66806055-66806074 | MS.gene022231:intron | 55.0% | |
| GACCGGTGTGGAGGAGAAAA+GGG | - | chr3.3:66803631-66803650 | MS.gene022231:intron | 55.0% | |
| GGTCTGTTCGGGAGATTGGA+GGG | - | chr3.3:66805939-66805958 | MS.gene022231:intron | 55.0% | |
| GTCTGTTCGGGAGATTGGAG+GGG | - | chr3.3:66805940-66805959 | MS.gene022231:intron | 55.0% | |
| TCTGGGAGAGGAGGGCTTTA+GGG | - | chr3.3:66806013-66806032 | MS.gene022231:intron | 55.0% | |
| TGCAAGTGAGAGACACTGCG+TGG | + | chr3.3:66803181-66803200 | None:intergenic | 55.0% | |
| TGTTCAGTGGGGGGATTGCA+AGG | - | chr3.3:66805356-66805375 | MS.gene022231:intron | 55.0% | |
| TTGAGTTCCCCTACCGTAGG+GGG | + | chr3.3:66806065-66806084 | None:intergenic | 55.0% | |
| ! | AGCCCTTTTCTCCTCCACAC+CGG | + | chr3.3:66803636-66803655 | None:intergenic | 55.0% |
| ! | AGGCAGCCAGAGCTTTATCC+TGG | + | chr3.3:66806702-66806721 | None:intergenic | 55.0% |
| ! | CAAGGGGGACAGAGAGCTTT+TGG | - | chr3.3:66803989-66804008 | MS.gene022231:intron | 55.0% |
| !! | TCTCTGGGGTATAGCCCACA+CGG | + | chr3.3:66806476-66806495 | None:intergenic | 55.0% |
| !!! | TACTGGAGGAGGGTTTTGGG+AGG | - | chr3.3:66806091-66806110 | MS.gene022231:intron | 55.0% |
| AGCTCCGTGTGAGGCTCAGA+TGG | - | chr3.3:66804093-66804112 | MS.gene022231:intron | 60.0% | |
| ATCACGAGCGACGAGACGAG+CGG | + | chr3.3:66803239-66803258 | None:intergenic | 60.0% | |
| CAGACGAGGCTCAACCGTGT+GGG | - | chr3.3:66806459-66806478 | MS.gene022231:CDS | 60.0% | |
| GAGACGAGCGGCTTCGTCTT+TGG | + | chr3.3:66803227-66803246 | None:intergenic | 60.0% | |
| GAGATTGAAGGGGAGGGGAC+AGG | + | chr3.3:66806311-66806330 | None:intergenic | 60.0% | |
| GCCGACGCAACCACATTGGA+CGG | + | chr3.3:66803437-66803456 | None:intergenic | 60.0% | |
| GGCTGAGCATAGGAAGGAGC+TGG | - | chr3.3:66806521-66806540 | MS.gene022231:intron | 60.0% | |
| GGGTCTGTTCGGGAGATTGG+AGG | - | chr3.3:66805938-66805957 | MS.gene022231:intron | 60.0% | |
| GTTCGGGAGATTGGAGGGGA+GGG | - | chr3.3:66805944-66805963 | MS.gene022231:intron | 60.0% | |
| TGTTCGGGAGATTGGAGGGG+AGG | - | chr3.3:66805943-66805962 | MS.gene022231:intron | 60.0% | |
| TTCGGGAGATTGGAGGGGAG+GGG | - | chr3.3:66805945-66805964 | MS.gene022231:intron | 60.0% | |
| ! | CTGGGAGAGGAGGGCTTTAG+GGG | - | chr3.3:66806014-66806033 | MS.gene022231:intron | 60.0% |
| CAGGTTCGGGGTTCGAACCC+CGG | - | chr3.3:66806213-66806232 | MS.gene022231:CDS | 65.0% | |
| GCAGACGAGGCTCAACCGTG+TGG | - | chr3.3:66806458-66806477 | MS.gene022231:CDS | 65.0% | |
| GGAGATTGGAGGGGAGGGGA+GGG | - | chr3.3:66805949-66805968 | MS.gene022231:intron | 65.0% | |
| TGAAGGGGAGGGGACAGGAG+AGG | + | chr3.3:66806306-66806325 | None:intergenic | 65.0% | |
| TTGGAGGGGAGGGGAGGGTT+TGG | - | chr3.3:66805954-66805973 | MS.gene022231:intron | 65.0% | |
| ! | CAATGTGGTTGCGTCGGCGC+AGG | - | chr3.3:66803439-66803458 | MS.gene022231:intron | 65.0% |
| ! | CTGCGCCGACGCAACCACAT+TGG | + | chr3.3:66803441-66803460 | None:intergenic | 65.0% |
| AGGGGAGGGGACAGGAGAGG+AGG | + | chr3.3:66806303-66806322 | None:intergenic | 70.0% | |
| GGGAGATTGGAGGGGAGGGG+AGG | - | chr3.3:66805948-66805967 | MS.gene022231:intron | 70.0% | |
| GGGAGGGGACAGGAGAGGAG+GGG | + | chr3.3:66806301-66806320 | None:intergenic | 70.0% | |
| GGGGAGGGGACAGGAGAGGA+GGG | + | chr3.3:66806302-66806321 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 66803061 | 66806810 | 66803061 | ID=MS.gene022231 |
| chr3.3 | mRNA | 66803061 | 66806810 | 66803061 | ID=MS.gene022231.t1;Parent=MS.gene022231 |
| chr3.3 | exon | 66806579 | 66806810 | 66806579 | ID=MS.gene022231.t1.exon1;Parent=MS.gene022231.t1 |
| chr3.3 | CDS | 66806579 | 66806810 | 66806579 | ID=cds.MS.gene022231.t1;Parent=MS.gene022231.t1 |
| chr3.3 | exon | 66806358 | 66806490 | 66806358 | ID=MS.gene022231.t1.exon2;Parent=MS.gene022231.t1 |
| chr3.3 | CDS | 66806358 | 66806490 | 66806358 | ID=cds.MS.gene022231.t1;Parent=MS.gene022231.t1 |
| chr3.3 | exon | 66806142 | 66806276 | 66806142 | ID=MS.gene022231.t1.exon3;Parent=MS.gene022231.t1 |
| chr3.3 | CDS | 66806142 | 66806276 | 66806142 | ID=cds.MS.gene022231.t1;Parent=MS.gene022231.t1 |
| chr3.3 | exon | 66805682 | 66805805 | 66805682 | ID=MS.gene022231.t1.exon4;Parent=MS.gene022231.t1 |
| chr3.3 | CDS | 66805682 | 66805805 | 66805682 | ID=cds.MS.gene022231.t1;Parent=MS.gene022231.t1 |
| chr3.3 | exon | 66803272 | 66803409 | 66803272 | ID=MS.gene022231.t1.exon5;Parent=MS.gene022231.t1 |
| chr3.3 | CDS | 66803272 | 66803409 | 66803272 | ID=cds.MS.gene022231.t1;Parent=MS.gene022231.t1 |
| chr3.3 | exon | 66803061 | 66803168 | 66803061 | ID=MS.gene022231.t1.exon6;Parent=MS.gene022231.t1 |
| chr3.3 | CDS | 66803061 | 66803168 | 66803061 | ID=cds.MS.gene022231.t1;Parent=MS.gene022231.t1 |
| Gene Sequence |
| Protein sequence |
