AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene022896

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene022896.t1 MTR_6g016470 91.266 1019 87 2 1 1017 1 1019 0.0 1882
MS.gene022896.t1 MTR_7g095710 65.073 1025 316 12 28 1017 35 1052 0.0 1255
MS.gene022896.t1 MTR_8g013780 95.812 573 24 0 447 1019 1 573 0.0 1134
MS.gene022896.t1 MTR_2g038310 56.153 967 400 9 52 1009 123 1074 0.0 1017
MS.gene022896.t1 MTR_4g008170 56.437 971 395 12 50 1009 133 1086 0.0 1008
MS.gene022896.t1 MTR_4g008170 55.816 980 394 14 50 1009 133 1093 0.0 990
MS.gene022896.t1 MTR_2g038310 56.610 885 360 9 52 927 123 992 0.0 915
MS.gene022896.t1 MTR_4g008650 48.133 964 455 16 55 1004 79 1011 0.0 859
MS.gene022896.t1 MTR_8g013810 93.654 457 23 1 1 457 1 451 0.0 857
MS.gene022896.t1 MTR_8g090125 47.794 952 456 15 69 1007 49 972 0.0 846
MS.gene022896.t1 MTR_4g096990 48.330 958 460 14 56 1004 81 1012 0.0 812
MS.gene022896.t1 MTR_5g015590 48.021 960 462 15 56 1004 81 1014 0.0 803
MS.gene022896.t1 MTR_3g103070 46.722 961 475 13 55 1004 82 1016 0.0 797
MS.gene022896.t1 MTR_0005s0140 46.017 954 472 14 69 1007 11 936 0.0 795
MS.gene022896.t1 MTR_4g043690 46.017 954 472 14 69 1007 96 1021 0.0 795
MS.gene022896.t1 MTR_3g103070 49.015 863 406 12 153 1004 1 840 0.0 751
MS.gene022896.t1 MTR_5g015590 48.584 883 417 15 56 927 81 937 0.0 735
MS.gene022896.t1 MTR_2g105830 54.201 738 321 10 63 794 129 855 0.0 728
MS.gene022896.t1 MTR_8g446010 41.307 949 514 14 69 1004 49 967 0.0 686
MS.gene022896.t1 MTR_8g045070 40.506 948 500 13 69 1004 49 944 0.0 670
MS.gene022896.t1 MTR_4g008650 47.201 786 374 15 55 830 79 833 0.0 669
MS.gene022896.t1 MTR_5g015590 47.187 782 380 14 56 830 81 836 0.0 616
MS.gene022896.t1 MTR_5g015590 45.592 726 362 14 56 774 81 780 9.34e-176 532
MS.gene022896.t1 MTR_5g097270 32.914 875 529 16 151 1002 165 1004 1.70e-135 435
MS.gene022896.t1 MTR_4g014480 29.684 1014 618 23 19 1004 3 949 1.87e-123 401
MS.gene022896.t1 MTR_7g100110 32.203 885 462 28 101 885 38 884 9.27e-104 350
MS.gene022896.t1 MTR_8g027160 31.106 868 488 22 106 886 25 869 4.89e-95 322
MS.gene022896.t1 MTR_8g027160 31.027 867 488 22 106 885 25 868 1.01e-93 322
MS.gene022896.t1 MTR_2g105690 61.778 225 81 1 790 1009 19 243 1.25e-92 295
MS.gene022896.t1 MTR_3g103270 30.191 838 476 18 124 890 65 864 1.02e-87 304
MS.gene022896.t1 MTR_8g027160 29.973 754 419 21 106 773 25 755 2.86e-68 244
MS.gene022896.t1 MTR_8g027160 29.841 754 420 21 106 773 25 755 8.71e-68 243
MS.gene022896.t1 MTR_8g089870 24.506 759 469 21 153 881 69 753 6.41e-45 176
MS.gene022896.t1 MTR_4g116950 22.549 714 434 20 122 816 44 657 2.02e-44 174
MS.gene022896.t1 MTR_2g036650 24.378 603 371 12 218 816 141 662 3.41e-44 174
MS.gene022896.t1 MTR_7g117500 23.386 821 494 26 220 1019 145 851 4.52e-44 173
MS.gene022896.t1 MTR_4g127710 22.318 699 454 17 122 816 46 659 1.40e-43 172
MS.gene022896.t1 MTR_4g127710 22.318 699 454 17 122 816 46 659 1.52e-43 172
MS.gene022896.t1 MTR_2g449840 22.531 719 443 19 122 824 44 664 2.04e-42 168
MS.gene022896.t1 MTR_2g104860 24.757 618 364 18 218 824 134 661 7.66e-42 166
MS.gene022896.t1 MTR_3g108800 24.626 601 371 15 218 816 135 655 1.29e-41 166
MS.gene022896.t1 MTR_3g108800 24.626 601 371 15 218 816 136 656 1.50e-41 166
MS.gene022896.t1 MTR_1g009760 24.126 601 374 15 218 816 139 659 2.67e-41 164
MS.gene022896.t1 MTR_1g009760 24.126 601 374 15 218 816 136 656 3.53e-41 164
MS.gene022896.t1 MTR_6g011310 23.226 620 371 17 218 824 138 665 9.68e-41 163
MS.gene022896.t1 MTR_7g117500 23.039 816 492 27 220 1019 145 840 2.29e-40 162
MS.gene022896.t1 MTR_4g107500 22.866 621 372 16 218 824 140 667 6.74e-40 160
MS.gene022896.t1 MTR_8g063880 23.754 602 375 16 218 816 136 656 7.06e-40 160
MS.gene022896.t1 MTR_1g009720 23.471 605 373 16 218 816 136 656 3.31e-39 158
MS.gene022896.t1 MTR_6g011310 23.548 620 364 18 218 824 138 660 3.47e-39 158
MS.gene022896.t1 MTR_8g006790 22.570 607 390 13 218 824 144 670 1.34e-36 150
MS.gene022896.t1 MTR_5g052190 76.250 80 19 0 520 599 279 358 1.22e-31 134
MS.gene022896.t1 MTR_3g097560 23.504 685 391 21 172 779 215 843 2.32e-21 101
MS.gene022896.t1 MTR_2g035840 31.683 202 104 4 620 821 771 938 1.24e-19 95.5
MS.gene022896.t1 MTR_2g090610 21.625 800 454 25 211 866 98 868 1.38e-19 95.5
MS.gene022896.t1 MTR_2g090610 21.625 800 454 25 211 866 98 868 1.43e-19 95.1
MS.gene022896.t1 MTR_4g094695 30.612 196 103 4 624 819 775 937 1.46e-18 92.0
MS.gene022896.t1 MTR_4g008640 49.020 102 45 3 579 680 76 170 2.34e-17 81.3
MS.gene022896.t1 MTR_8g079250 30.055 183 96 3 639 821 788 938 3.77e-17 87.4
MS.gene022896.t1 MTR_5g010420 32.240 183 88 5 619 798 757 906 8.70e-17 86.3
MS.gene022896.t1 MTR_8g012390 30.332 211 107 5 630 839 751 922 3.32e-16 84.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene022896.t1 AT3G22910 67.092 1018 306 11 12 1018 17 1016 0.0 1303
MS.gene022896.t1 AT3G63380 66.070 1005 306 9 28 1013 27 1015 0.0 1274
MS.gene022896.t1 AT4G29900 55.400 1000 421 10 27 1017 79 1062 0.0 1058
MS.gene022896.t1 AT4G29900 55.400 1000 421 10 27 1017 79 1062 0.0 1058
MS.gene022896.t1 AT5G57110 56.341 962 402 7 64 1017 109 1060 0.0 1050
MS.gene022896.t1 AT5G57110 56.341 962 402 7 64 1017 109 1060 0.0 1050
MS.gene022896.t1 AT5G57110 56.341 962 402 7 64 1017 109 1060 0.0 1050
MS.gene022896.t1 AT3G21180 56.166 965 402 11 65 1017 124 1079 0.0 1014
MS.gene022896.t1 AT3G57330 47.908 956 461 12 56 1004 80 1005 0.0 862
MS.gene022896.t1 AT3G57330 47.908 956 461 12 56 1004 25 950 0.0 862
MS.gene022896.t1 AT2G41560 44.664 1012 513 14 6 1007 37 1011 0.0 839
MS.gene022896.t1 AT2G41560 47.071 939 457 12 79 1007 1 909 0.0 825
MS.gene022896.t1 AT2G41560 47.071 939 457 12 79 1007 1 909 0.0 825
MS.gene022896.t1 AT2G41560 47.071 939 457 12 79 1007 1 909 0.0 825
MS.gene022896.t1 AT1G27770 47.132 959 469 13 58 1004 22 954 0.0 814
MS.gene022896.t1 AT1G27770 47.237 959 468 14 58 1004 85 1017 0.0 813
MS.gene022896.t1 AT1G27770 47.237 959 468 14 58 1004 85 1017 0.0 813
MS.gene022896.t1 AT4G37640 47.138 961 472 13 55 1004 79 1014 0.0 788
MS.gene022896.t1 AT2G22950 47.242 961 472 13 55 1004 79 1015 0.0 781
MS.gene022896.t1 AT5G53010 37.734 909 489 17 69 951 140 997 2.91e-176 542
MS.gene022896.t1 AT5G53010 37.674 645 383 10 69 712 140 766 6.08e-124 396
MS.gene022896.t1 AT1G27770 40.964 581 313 10 55 621 82 646 3.09e-120 391
MS.gene022896.t1 AT1G27770 57.929 309 125 2 701 1004 635 943 4.60e-109 361
MS.gene022896.t1 AT1G07670 33.174 835 467 24 122 885 54 868 2.15e-107 359
MS.gene022896.t1 AT1G07670 33.174 835 467 24 122 885 54 868 2.15e-107 359
MS.gene022896.t1 AT1G07810 33.174 835 467 24 122 885 54 868 5.69e-107 358
MS.gene022896.t1 AT4G00900 32.831 862 463 26 94 868 14 846 3.64e-100 339
MS.gene022896.t1 AT4G00900 32.831 862 463 26 94 868 14 846 3.64e-100 339
MS.gene022896.t1 AT1G10130 28.864 977 547 27 122 995 32 963 2.59e-89 308
MS.gene022896.t1 AT2G24520 25.295 593 361 14 225 816 125 636 1.97e-43 171
MS.gene022896.t1 AT2G24520 25.295 593 361 14 225 816 125 636 1.97e-43 171
MS.gene022896.t1 AT2G24520 25.295 593 361 14 225 816 188 699 2.11e-43 172
MS.gene022896.t1 AT3G60330 24.065 615 367 19 219 824 138 661 2.74e-43 171
MS.gene022896.t1 AT3G60330 24.065 615 367 19 219 824 138 661 2.74e-43 171
MS.gene022896.t1 AT1G80660 23.825 617 371 18 218 824 10 537 3.23e-43 170
MS.gene022896.t1 AT1G80660 23.825 617 371 18 218 824 139 666 5.10e-43 170
MS.gene022896.t1 AT1G80660 23.825 617 371 18 218 824 139 666 5.21e-43 170
MS.gene022896.t1 AT1G80660 23.825 617 371 18 218 824 139 666 5.40e-43 170
MS.gene022896.t1 AT3G60330 23.902 615 368 19 219 824 138 661 5.67e-43 170
MS.gene022896.t1 AT3G60330 23.902 615 368 19 219 824 138 661 5.67e-43 170
MS.gene022896.t1 AT3G42640 22.895 760 470 25 78 824 8 664 1.26e-41 166
MS.gene022896.t1 AT2G07560 23.274 782 485 23 78 847 8 686 1.63e-41 166
MS.gene022896.t1 AT1G17260 23.645 609 366 13 218 816 142 661 1.26e-40 162
MS.gene022896.t1 AT3G47950 23.263 619 372 18 218 824 142 669 2.52e-40 162
MS.gene022896.t1 AT3G47950 23.263 619 372 18 218 824 142 669 2.52e-40 162
MS.gene022896.t1 AT4G30190 23.913 644 383 17 218 847 134 684 3.48e-40 161
MS.gene022896.t1 AT5G62670 22.964 614 380 16 218 824 138 665 1.29e-39 159
MS.gene022896.t1 AT2G18960 23.913 644 383 17 218 847 70 620 1.52e-39 159
MS.gene022896.t1 AT2G18960 23.913 644 383 17 218 847 70 620 1.52e-39 159
MS.gene022896.t1 AT2G18960 23.913 644 383 17 218 847 134 684 1.52e-39 159
MS.gene022896.t1 AT5G57350 23.770 610 365 17 218 816 135 655 3.87e-39 158
MS.gene022896.t1 AT5G57350 23.770 610 365 17 218 816 135 655 3.87e-39 158
MS.gene022896.t1 AT5G57350 23.770 610 365 17 218 816 135 655 3.87e-39 158
MS.gene022896.t1 AT4G30190 23.123 666 394 19 218 847 134 717 4.62e-37 151
MS.gene022896.t1 AT2G24520 23.843 432 278 8 385 816 13 393 1.34e-28 123
MS.gene022896.t1 AT5G57350 23.963 434 275 10 385 816 13 393 4.69e-28 122
MS.gene022896.t1 AT5G23630 22.768 672 385 20 172 766 215 829 8.23e-21 99.8
MS.gene022896.t1 AT1G63440 31.694 183 93 2 639 821 787 937 1.62e-19 95.1
MS.gene022896.t1 AT5G44790 33.005 203 102 5 619 821 780 948 6.66e-19 93.2
MS.gene022896.t1 AT4G11730 23.529 340 214 13 122 454 45 345 2.89e-16 84.3
MS.gene022896.t1 AT4G30110 27.830 212 113 4 636 847 508 679 5.78e-15 80.5
MS.gene022896.t1 AT4G30110 27.830 212 113 4 636 847 508 679 5.78e-15 80.5

Find 164 sgRNAs with CRISPR-Local

Find 200 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAACAGCAGTTCAGTTATTA+TGG 0.164193 8.1:+83536752 MS.gene022896:CDS
TCATGACAATCTATTGTTCT+AGG 0.188399 8.1:+83534073 MS.gene022896:CDS
AATAACTGAACTGCTGTTAA+TGG 0.205635 8.1:-83536748 None:intergenic
TGAGTTTAATGCAAGGAAAT+TGG 0.225227 8.1:+83537035 MS.gene022896:CDS
TCTTATATTGTTTGTGTTGT+TGG 0.228608 8.1:-83534037 None:intergenic
CTATAGTGACAGTTATAAAT+TGG 0.262542 8.1:+83536617 MS.gene022896:CDS
ATTATGGGTGAATTTGATTA+TGG 0.264335 8.1:+83536768 MS.gene022896:CDS
TTTAACAATTCTTATTCTTT+TGG 0.264806 8.1:+83534422 MS.gene022896:CDS
ACTTTCTGCATGTGAAACTA+TGG 0.271109 8.1:+83535247 MS.gene022896:CDS
TTGGTCTAGCTGCTGTTTCT+TGG 0.282077 8.1:+83537208 MS.gene022896:CDS
AATGCTATCTTGGGCTGTTT+TGG 0.282495 8.1:+83535632 MS.gene022896:CDS
AAAACCTACTAAGGATTTAA+TGG 0.285321 8.1:+83536822 MS.gene022896:CDS
TTTGGAATTGAAAATGGATA+TGG 0.303373 8.1:+83535650 MS.gene022896:CDS
CTTAAAACTAACATTGAGTT+TGG 0.304565 8.1:+83534276 MS.gene022896:CDS
AAATGAAGGTCACAAAGTTT+TGG 0.306981 8.1:+83535445 MS.gene022896:CDS
CAATGATATTCAAATTGATT+TGG 0.308945 8.1:+83534608 MS.gene022896:CDS
CTTTCCAATGTGCAATAGTT+TGG 0.325768 8.1:-83535767 None:intergenic
TTCGTCAATGCCGTTGCTTA+TGG 0.332345 8.1:-83534910 None:intergenic
GCTGCTGTTTCTTGGCCAAT+TGG 0.333516 8.1:+83537216 MS.gene022896:CDS
GAGTTAACAAAATAACTATT+TGG 0.336053 8.1:-83536921 None:intergenic
GCTACTCTTTCACTTGGCTT+TGG 0.339406 8.1:+83534450 MS.gene022896:CDS
GTTAGGACTTGTCGGCATTA+AGG 0.342087 8.1:+83536016 MS.gene022896:CDS
GACAATGGTTTAACATTGTT+AGG 0.351609 8.1:+83535999 MS.gene022896:CDS
TATGGATACATTAGGTGCTT+TGG 0.352422 8.1:+83536786 MS.gene022896:CDS
GTTTCATTTGTGTCCTGATT+TGG 0.353718 8.1:-83536319 None:intergenic
CACATAATGTTAGTTATAAG+AGG 0.361954 8.1:-83536871 None:intergenic
CTAATACTGAGAGGTTGAAT+TGG 0.365165 8.1:+83537166 MS.gene022896:CDS
AGCTGATATTGGACTTTCAA+TGG 0.376166 8.1:+83536528 MS.gene022896:CDS
TATAGTGACAGTTATAAATT+GGG 0.376682 8.1:+83536618 MS.gene022896:CDS
GTTCAATGCTTAAAACAAAA+AGG 0.379356 8.1:+83536451 MS.gene022896:CDS
CTCAATCGGAAAGGTTGGTT+TGG 0.386409 8.1:+83534971 MS.gene022896:CDS
TTGATCAATTGAAGAACAAA+TGG 0.386607 8.1:-83535513 None:intergenic
GATGTGATGAATGCAGTTAT+TGG 0.388736 8.1:+83535101 MS.gene022896:CDS
AATTTGATTATGGATACATT+AGG 0.389466 8.1:+83536778 MS.gene022896:CDS
TGCTGGTGTGAATGTCAAAA+TGG 0.394439 8.1:+83536085 MS.gene022896:CDS
TTGTTTGTGTTGTTGGTGTT+TGG 0.395216 8.1:-83534030 None:intergenic
GGTCATGTAGTAGCTGTAAC+TGG 0.398797 8.1:+83536472 MS.gene022896:CDS
TCAATTCGACAACAAGTGTT+TGG 0.401723 8.1:+83534333 MS.gene022896:CDS
GATGTTGTTTGTTTGAAGAT+TGG 0.403237 8.1:+83534681 MS.gene022896:CDS
AACAGCAGTTCAGTTATTAT+GGG 0.404290 8.1:+83536753 MS.gene022896:CDS
GCCGATGGATTGTTCCTAGA+TGG 0.404691 8.1:+83534717 MS.gene022896:CDS
GGGAACACAAAGACTGATAA+TGG 0.405469 8.1:+83535041 MS.gene022896:CDS
CGGAATTCTTCAACCAAATC+AGG 0.406571 8.1:+83536306 MS.gene022896:CDS
GGTGTTCACAAATTGAAATC+AGG 0.407128 8.1:+83535564 MS.gene022896:CDS
TCATCCATTAAATCCTTAGT+AGG 0.407767 8.1:-83536826 None:intergenic
GTTCTTCAATTGATCAAAGA+AGG 0.413127 8.1:+83535519 MS.gene022896:CDS
AGAGGCTTTGTTCTACCAAC+AGG 0.415046 8.1:-83536853 None:intergenic
GTGAATGTCAAAATGGTTAC+AGG 0.417676 8.1:+83536092 MS.gene022896:CDS
GCATTGAAAGAAGCTGATAT+TGG 0.419377 8.1:+83536517 MS.gene022896:CDS
CATGACAATCTATTGTTCTA+GGG 0.426996 8.1:+83534074 MS.gene022896:CDS
CAAACCAACCTTTCCGATTG+AGG 0.434963 8.1:-83534970 None:intergenic
GGACTTTCAATGGGAATTCA+AGG 0.435159 8.1:+83536538 MS.gene022896:CDS
CTGTTGATTCGATATTTCAC+TGG 0.438272 8.1:+83535020 MS.gene022896:CDS
ACCATTAGAAGTTTATCAAA+AGG 0.438596 8.1:-83536430 None:intergenic
AGAGGTTGAATTGGAGAGAG+TGG 0.441904 8.1:+83537175 MS.gene022896:CDS
CGAAAGCATTATTCAAGGTA+TGG 0.444612 8.1:+83535881 MS.gene022896:CDS
TACGAGAGTTTCTTGATCAA+TGG 0.446567 8.1:-83534184 None:intergenic
AGTGTCAATGTCACAGCTAA+TGG 0.447589 8.1:-83535176 None:intergenic
TCAATATTTGATATTGTTGT+TGG 0.451599 8.1:+83534657 MS.gene022896:CDS
GTCGTTGTTGCTATCCCTGA+GGG 0.454074 8.1:+83535149 MS.gene022896:CDS
AACTTCACAACAAAACCAAT+TGG 0.455892 8.1:-83537231 None:intergenic
TTTGTAGCGGCGGTTTCAGC+AGG 0.459320 8.1:+83536718 MS.gene022896:CDS
GAGAAGAAGAATGTGTTTGA+AGG 0.463945 8.1:+83537057 MS.gene022896:CDS
CAGAAACATGGAGGAGTTGA+AGG 0.464354 8.1:+83534240 MS.gene022896:CDS
AGAGAGTGGATTGTTTGTAT+TGG 0.469398 8.1:+83537189 MS.gene022896:CDS
AAATTCGAAAGCATTATTCA+AGG 0.477862 8.1:+83535876 MS.gene022896:CDS
GCTGATATTGGACTTTCAAT+GGG 0.477956 8.1:+83536529 MS.gene022896:CDS
TCAACCGCGGTCTTCACTCC+TGG 0.480063 8.1:-83536050 None:intergenic
GACGAAGAGCTTGGAGTTGA+AGG 0.481741 8.1:+83535951 MS.gene022896:CDS
TCAAAATTCCACAACCATCA+TGG 0.483812 8.1:-83535827 None:intergenic
GGAGTTGCTCTCAATACAAC+TGG 0.484303 8.1:+83535540 MS.gene022896:CDS
GAATATGCACCAACTTCCAT+TGG 0.484480 8.1:-83535480 None:intergenic
TTAACATTGTTAGGACTTGT+CGG 0.492019 8.1:+83536008 MS.gene022896:CDS
GTTTGTGCTACTCTTTCACT+TGG 0.496780 8.1:+83534444 MS.gene022896:CDS
GGTTTAGAACCAATGGAAGT+TGG 0.498433 8.1:+83535471 MS.gene022896:CDS
CTCTCAACGAATGTCCATCT+AGG 0.502870 8.1:-83534731 None:intergenic
GTTGATGAATCGAGCATGAC+CGG 0.505360 8.1:+83534753 MS.gene022896:CDS
TTGTTAACTCTTCAATTCAA+AGG 0.506553 8.1:+83536934 MS.gene022896:CDS
TCGTAGTGGGCGCCGACAAA+AGG 0.507237 8.1:+83534632 MS.gene022896:CDS
CGGTTGGTATGAACACAACA+TGG 0.507879 8.1:+83534871 MS.gene022896:CDS
AATAAACTAACATCCTCAAT+CGG 0.510354 8.1:+83534957 MS.gene022896:CDS
ACAGCTAATGGTAAACCCTC+AGG 0.511582 8.1:-83535164 None:intergenic
AAGAAACTCCTTTGCAAACA+AGG 0.516856 8.1:+83534931 MS.gene022896:CDS
ATCAAAGAAGGTTGGTATGA+TGG 0.518871 8.1:+83534489 MS.gene022896:CDS
GTGGTTCAAGTTTGTGAACA+AGG 0.521853 8.1:-83533986 None:intergenic
AGTAAAGGTTTGTCTGAGAC+TGG 0.521937 8.1:-83537258 None:intergenic
TCAAAATACCATGATGGTTG+TGG 0.522294 8.1:+83535819 MS.gene022896:CDS
AAATCAACCACGGTGAAAGA+TGG 0.523772 8.1:-83534141 None:intergenic
ATATCAGCTTCTTTCAATGC+CGG 0.524112 8.1:-83536514 None:intergenic
AGAACAATAGATTGTCATGA+AGG 0.524303 8.1:-83534070 None:intergenic
CTCTTATAACTAACATTATG+TGG 0.531696 8.1:+83536872 MS.gene022896:CDS
CAAATTGATTTGGTTCGTAG+TGG 0.532205 8.1:+83534618 MS.gene022896:CDS
AAAGTTACCGACGAAGAGCT+TGG 0.534806 8.1:+83535942 MS.gene022896:CDS
GTCTTCACTCCTGGACGACA+TGG 0.535794 8.1:-83536041 None:intergenic
AACTCAAAGAAGAAAAGAAG+TGG 0.537966 8.1:+83535717 MS.gene022896:CDS
AGAAGAAGAATGTGTTTGAA+GGG 0.540107 8.1:+83537058 MS.gene022896:CDS
GTAGTAGCTGTAACTGGAGA+TGG 0.540476 8.1:+83536478 MS.gene022896:CDS
AAAATGCTCGTTACATCGGT+TGG 0.541310 8.1:+83534855 MS.gene022896:CDS
ATTGGTGCTTCAAGTTGTGA+TGG 0.541508 8.1:+83537122 MS.gene022896:CDS
CTTTCTGCATGTGAAACTAT+GGG 0.545575 8.1:+83535248 MS.gene022896:CDS
CTTCACACACGAAGAGAGGT+TGG 0.545743 8.1:+83536369 MS.gene022896:CDS
GGCTTTGGAATCAAAGAGCA+TGG 0.546075 8.1:+83534465 MS.gene022896:CDS
TTGGCTTGGTTTAGAACCAA+TGG 0.546364 8.1:+83535464 MS.gene022896:CDS
ACAACACAAACAATATAAGA+TGG 0.547366 8.1:+83534040 MS.gene022896:CDS
ACATCCTCAATCGGAAAGGT+TGG 0.547400 8.1:+83534966 MS.gene022896:CDS
ACAAATGAAACAGTGGTTGA+AGG 0.547600 8.1:+83536331 MS.gene022896:CDS
AAAGAGCATGGAATCAAAGA+AGG 0.549041 8.1:+83534477 MS.gene022896:CDS
TCCAGAACAAAAGTTGCCGA+TGG 0.550171 8.1:+83534825 MS.gene022896:CDS
GGGAATTGTTGGTATGACAT+TGG 0.555187 8.1:+83537104 MS.gene022896:CDS
TTATTCAACCTTGTTTGCAA+AGG 0.556386 8.1:-83534939 None:intergenic
ACTCACTTTGAATCAAATGA+AGG 0.556389 8.1:+83535431 MS.gene022896:CDS
AGCATGGAATCAAAGAAGGT+TGG 0.557290 8.1:+83534481 MS.gene022896:CDS
TTATTCAATGAAGAAAATGA+TGG 0.562067 8.1:+83535202 MS.gene022896:CDS
AAATTGATTTGGTTCGTAGT+GGG 0.562240 8.1:+83534619 MS.gene022896:CDS
TTGGAAAGGAGCAGCAGAGA+TGG 0.565912 8.1:+83535782 MS.gene022896:CDS
ATTAAGGATCCATGTCGTCC+AGG 0.566040 8.1:+83536032 MS.gene022896:CDS
TCTAGGAACAATCCATCGGC+TGG 0.567484 8.1:-83534714 None:intergenic
AGTTGAGAAAATCTCTGTGA+TGG 0.570853 8.1:+83536396 MS.gene022896:CDS
AGGTGCTTTGGCTCTCGCAA+CGG 0.573690 8.1:+83536798 MS.gene022896:CDS
ATTTCAATTAACAGTGAATG+TGG 0.574758 8.1:+83536678 MS.gene022896:CDS
GTTGAAGCTTGCCAACATGC+TGG 0.584909 8.1:+83536068 MS.gene022896:CDS
TGTGAACAAGGGCATTGACA+TGG 0.585662 8.1:-83533974 None:intergenic
TGTTGATTCGATATTTCACT+GGG 0.585802 8.1:+83535021 MS.gene022896:CDS
GCAACTTCACACACGAAGAG+AGG 0.586009 8.1:+83536365 MS.gene022896:CDS
CAAACTATTGCACATTGGAA+AGG 0.587059 8.1:+83535768 MS.gene022896:CDS
TGAAGGAGAGACAAACAAGA+TGG 0.589139 8.1:+83535968 MS.gene022896:CDS
ACTATTTGCACTGATAAGAC+AGG 0.589952 8.1:+83535281 MS.gene022896:CDS
CTCTACATGATCACTCTCAC+CGG 0.592082 8.1:-83534772 None:intergenic
AGATGGAACAAATGATGCAC+CGG 0.596050 8.1:+83536495 MS.gene022896:CDS
TGACATTCACACCAGCATGT+TGG 0.604962 8.1:-83536079 None:intergenic
TTCAACTCCAAGCTCTTCGT+CGG 0.604998 8.1:-83535949 None:intergenic
AAAGAAGGTTGGTATGATGG+TGG 0.609959 8.1:+83534492 MS.gene022896:CDS
ATTGACACACTTCAGAAACA+TGG 0.613995 8.1:+83534228 MS.gene022896:CDS
TGGTTCAAGTTTGTGAACAA+GGG 0.619115 8.1:-83533985 None:intergenic
ACTAACATCCTCAATCGGAA+AGG 0.622770 8.1:+83534962 MS.gene022896:CDS
TCCATCTAGGAACAATCCAT+CGG 0.623925 8.1:-83534718 None:intergenic
ATGTGTTCAAAATACCATGA+TGG 0.624690 8.1:+83535813 MS.gene022896:CDS
TGTTTAATGAGTTTAATGCA+AGG 0.630387 8.1:+83537028 MS.gene022896:CDS
TGTCGTTGTTGCTATCCCTG+AGG 0.631694 8.1:+83535148 MS.gene022896:CDS
GGTGATCAAGTACCAGCCGA+TGG 0.639660 8.1:+83534702 MS.gene022896:CDS
GGTTGGTATGAACACAACAT+GGG 0.640345 8.1:+83534872 MS.gene022896:CDS
CAGCTAATGGTAAACCCTCA+GGG 0.642782 8.1:-83535163 None:intergenic
ATAACCAAACTATTGCACAT+TGG 0.646246 8.1:+83535763 MS.gene022896:CDS
ATCGAATCAACAGAACTACA+AGG 0.649771 8.1:-83535010 None:intergenic
TGATCAATGGTAAAAGAGTG+AGG 0.652312 8.1:-83534171 None:intergenic
ATGATGAGTTCCATAAGCAA+CGG 0.653556 8.1:+83534900 MS.gene022896:CDS
AGAAGTTTGCTAATACTGAG+AGG 0.658673 8.1:+83537157 MS.gene022896:CDS
AATGCTTTCGAATTTCAACA+TGG 0.662441 8.1:-83535868 None:intergenic
ATGTTGGCAAGCTTCAACCG+CGG 0.662762 8.1:-83536063 None:intergenic
TTATAACTAACATTATGTGG+AGG 0.663994 8.1:+83536875 MS.gene022896:CDS
AAGATGGTAGTAAAAGACAA+TGG 0.672205 8.1:+83535984 MS.gene022896:CDS
AATGGAGCTAGAGAGTTCAA+CGG 0.673793 8.1:+83535059 MS.gene022896:CDS
TCAGGACACAAATGAAACAG+TGG 0.673826 8.1:+83536324 MS.gene022896:CDS
AATGATGGCTGATCAAGCAA+TGG 0.680846 8.1:+83535217 MS.gene022896:CDS
ATAGTGACAGTTATAAATTG+GGG 0.683790 8.1:+83536619 MS.gene022896:CDS
GTTGCTCTCAATACAACTGG+TGG 0.691153 8.1:+83535543 MS.gene022896:CDS
ACCTACTCCATCTTTCACCG+TGG 0.705281 8.1:+83534134 MS.gene022896:CDS
GTTGGTATGAACACAACATG+GGG 0.705560 8.1:+83534873 MS.gene022896:CDS
ACCACGGTGAAAGATGGAGT+AGG 0.718242 8.1:-83534135 None:intergenic
AAAGCTATAGCATTTGAATG+CGG 0.720955 8.1:+83536286 MS.gene022896:CDS
AGGTGAAGTTAAATCAACCA+CGG 0.722311 8.1:-83534151 None:intergenic
GACACACTTCAGAAACATGG+AGG 0.742804 8.1:+83534231 MS.gene022896:CDS
CATTGAGAAGTGTCTCAATG+TGG 0.745193 8.1:-83534005 None:intergenic
TCGTCCAGGAGTGAAGACCG+CGG 0.774693 8.1:+83536046 MS.gene022896:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTCAAAAAATCAAGTAA+AGG - chr8.1:83537276-83537295 None:intergenic 15.0%
!!! TACTTGATTTTTTGAATTTT+AGG + chr8.1:83537277-83537296 MS.gene022896:CDS 15.0%
!!! TTTAACAATTCTTATTCTTT+TGG + chr8.1:83534422-83534441 MS.gene022896:CDS 15.0%
!! AATTTGATTATGGATACATT+AGG + chr8.1:83536778-83536797 MS.gene022896:CDS 20.0%
!! CAATGATATTCAAATTGATT+TGG + chr8.1:83534608-83534627 MS.gene022896:CDS 20.0%
!! GAGTTAACAAAATAACTATT+TGG - chr8.1:83536924-83536943 None:intergenic 20.0%
!! TATAGTGACAGTTATAAATT+GGG + chr8.1:83536618-83536637 MS.gene022896:CDS 20.0%
!! TCAATATTTGATATTGTTGT+TGG + chr8.1:83534657-83534676 MS.gene022896:CDS 20.0%
!! TGGTTAATTAACAATTAGTT+AGG - chr8.1:83536220-83536239 None:intergenic 20.0%
!! TTATTCAATGAAGAAAATGA+TGG + chr8.1:83535202-83535221 MS.gene022896:CDS 20.0%
!!! AAATGAAAGAAACTTTTAGA+AGG - chr8.1:83534381-83534400 None:intergenic 20.0%
! AAAACCTACTAAGGATTTAA+TGG + chr8.1:83536822-83536841 MS.gene022896:CDS 25.0%
! AATAAACTAACATCCTCAAT+CGG + chr8.1:83534957-83534976 MS.gene022896:CDS 25.0%
! ACAACACAAACAATATAAGA+TGG + chr8.1:83534040-83534059 MS.gene022896:CDS 25.0%
! ACCATTAGAAGTTTATCAAA+AGG - chr8.1:83536433-83536452 None:intergenic 25.0%
! ATAGTGACAGTTATAAATTG+GGG + chr8.1:83536619-83536638 MS.gene022896:CDS 25.0%
! ATTATGGGTGAATTTGATTA+TGG + chr8.1:83536768-83536787 MS.gene022896:CDS 25.0%
! ATTTCAATTAACAGTGAATG+TGG + chr8.1:83536678-83536697 MS.gene022896:CDS 25.0%
! CACATAATGTTAGTTATAAG+AGG - chr8.1:83536874-83536893 None:intergenic 25.0%
! CTATAGTGACAGTTATAAAT+TGG + chr8.1:83536617-83536636 MS.gene022896:CDS 25.0%
! CTCTTATAACTAACATTATG+TGG + chr8.1:83536872-83536891 MS.gene022896:CDS 25.0%
! CTTAAAACTAACATTGAGTT+TGG + chr8.1:83534276-83534295 MS.gene022896:CDS 25.0%
! GTTCAATGCTTAAAACAAAA+AGG + chr8.1:83536451-83536470 MS.gene022896:CDS 25.0%
! TCAGAGATTAAGTATGTTAA+TGG - chr8.1:83536240-83536259 None:intergenic 25.0%
! TCTTATATTGTTTGTGTTGT+TGG - chr8.1:83534040-83534059 None:intergenic 25.0%
! TGTTTAATGAGTTTAATGCA+AGG + chr8.1:83537028-83537047 MS.gene022896:CDS 25.0%
! TTATAACTAACATTATGTGG+AGG + chr8.1:83536875-83536894 MS.gene022896:CDS 25.0%
! TTGATCAATTGAAGAACAAA+TGG - chr8.1:83535516-83535535 None:intergenic 25.0%
! TTGTTAACTCTTCAATTCAA+AGG + chr8.1:83536934-83536953 MS.gene022896:CDS 25.0%
!! CAAATATTGATACCTTTTGT+CGG - chr8.1:83534647-83534666 None:intergenic 25.0%
!! TCCTTTTGATAAACTTCTAA+TGG + chr8.1:83536429-83536448 MS.gene022896:CDS 25.0%
!! TTCAAAGGTGAGATTATTTT+TGG + chr8.1:83536949-83536968 MS.gene022896:CDS 25.0%
!! TTTGGAATTGAAAATGGATA+TGG + chr8.1:83535650-83535669 MS.gene022896:CDS 25.0%
!!! AAATTCGAAAGCATTATTCA+AGG + chr8.1:83535876-83535895 MS.gene022896:CDS 25.0%
!!! AATTTTGAAAGATCTTGACA+AGG + chr8.1:83535842-83535861 MS.gene022896:CDS 25.0%
!!! ACTTGTTATCAATTTTGTAG+CGG + chr8.1:83536705-83536724 MS.gene022896:CDS 25.0%
!!! ATTTAAGAGCAAGTTGTTTT+TGG + chr8.1:83537083-83537102 MS.gene022896:CDS 25.0%
!!! TTTAAGAGCAAGTTGTTTTT+GGG + chr8.1:83537084-83537103 MS.gene022896:CDS 25.0%
!!! TTTGTTCTGGAAAACAAAAA+AGG - chr8.1:83534816-83534835 None:intergenic 25.0%
!!! TTTTGTTGTTGAAGCTTTTA+AGG + chr8.1:83534398-83534417 MS.gene022896:CDS 25.0%
AAAGCTATAGCATTTGAATG+CGG + chr8.1:83536286-83536305 MS.gene022896:CDS 30.0%
AACAGCAGTTCAGTTATTAT+GGG + chr8.1:83536753-83536772 MS.gene022896:CDS 30.0%
AACTCAAAGAAGAAAAGAAG+TGG + chr8.1:83535717-83535736 MS.gene022896:CDS 30.0%
AACTTCACAACAAAACCAAT+TGG - chr8.1:83537234-83537253 None:intergenic 30.0%
AAGATGGTAGTAAAAGACAA+TGG + chr8.1:83535984-83536003 MS.gene022896:CDS 30.0%
AATAACTGAACTGCTGTTAA+TGG - chr8.1:83536751-83536770 None:intergenic 30.0%
AATGCTTTCGAATTTCAACA+TGG - chr8.1:83535871-83535890 None:intergenic 30.0%
ACTCACTTTGAATCAAATGA+AGG + chr8.1:83535431-83535450 MS.gene022896:CDS 30.0%
AGAACAATAGATTGTCATGA+AGG - chr8.1:83534073-83534092 None:intergenic 30.0%
AGAAGAAGAATGTGTTTGAA+GGG + chr8.1:83537058-83537077 MS.gene022896:CDS 30.0%
ATAACCAAACTATTGCACAT+TGG + chr8.1:83535763-83535782 MS.gene022896:CDS 30.0%
ATGTGTTCAAAATACCATGA+TGG + chr8.1:83535813-83535832 MS.gene022896:CDS 30.0%
CATGACAATCTATTGTTCTA+GGG + chr8.1:83534074-83534093 MS.gene022896:CDS 30.0%
GACAATGGTTTAACATTGTT+AGG + chr8.1:83535999-83536018 MS.gene022896:CDS 30.0%
GTTCTTCAATTGATCAAAGA+AGG + chr8.1:83535519-83535538 MS.gene022896:CDS 30.0%
TAACAGCAGTTCAGTTATTA+TGG + chr8.1:83536752-83536771 MS.gene022896:CDS 30.0%
TCATCCATTAAATCCTTAGT+AGG - chr8.1:83536829-83536848 None:intergenic 30.0%
TCATGACAATCTATTGTTCT+AGG + chr8.1:83534073-83534092 MS.gene022896:CDS 30.0%
TGAGTTTAATGCAAGGAAAT+TGG + chr8.1:83537035-83537054 MS.gene022896:CDS 30.0%
TTAACATTGTTAGGACTTGT+CGG + chr8.1:83536008-83536027 MS.gene022896:CDS 30.0%
! AAATGAAGGTCACAAAGTTT+TGG + chr8.1:83535445-83535464 MS.gene022896:CDS 30.0%
! GATGTTGTTTGTTTGAAGAT+TGG + chr8.1:83534681-83534700 MS.gene022896:CDS 30.0%
! TTAATGGATGAAAAACCTGT+TGG + chr8.1:83536838-83536857 MS.gene022896:CDS 30.0%
! TTATTCAACCTTGTTTGCAA+AGG - chr8.1:83534942-83534961 None:intergenic 30.0%
!! AAATTGATTTGGTTCGTAGT+GGG + chr8.1:83534619-83534638 MS.gene022896:CDS 30.0%
!! TGAAAGAAACTTTTAGAAGG+TGG - chr8.1:83534378-83534397 None:intergenic 30.0%
!! TGTTGATTCGATATTTCACT+GGG + chr8.1:83535021-83535040 MS.gene022896:CDS 30.0%
!!! AAGTTGTTTTTGGGAATTGT+TGG + chr8.1:83537093-83537112 MS.gene022896:CDS 30.0%
!!! TATTTTTGGTGTGAGTTCAA+AGG + chr8.1:83536963-83536982 MS.gene022896:CDS 30.0%
AAGAAACTCCTTTGCAAACA+AGG + chr8.1:83534931-83534950 MS.gene022896:CDS 35.0%
ACAAATGAAACAGTGGTTGA+AGG + chr8.1:83536331-83536350 MS.gene022896:CDS 35.0%
ACTTTCTGCATGTGAAACTA+TGG + chr8.1:83535247-83535266 MS.gene022896:CDS 35.0%
AGCTGATATTGGACTTTCAA+TGG + chr8.1:83536528-83536547 MS.gene022896:CDS 35.0%
AGGTGAAGTTAAATCAACCA+CGG - chr8.1:83534154-83534173 None:intergenic 35.0%
AGTTGAGAAAATCTCTGTGA+TGG + chr8.1:83536396-83536415 MS.gene022896:CDS 35.0%
ATATCAGCTTCTTTCAATGC+CGG - chr8.1:83536517-83536536 None:intergenic 35.0%
ATCGAATCAACAGAACTACA+AGG - chr8.1:83535013-83535032 None:intergenic 35.0%
ATGATGAGTTCCATAAGCAA+CGG + chr8.1:83534900-83534919 MS.gene022896:CDS 35.0%
ATTGACACACTTCAGAAACA+TGG + chr8.1:83534228-83534247 MS.gene022896:CDS 35.0%
CAAACTATTGCACATTGGAA+AGG + chr8.1:83535768-83535787 MS.gene022896:CDS 35.0%
CATACTTAATCTCTGATGAC+AGG + chr8.1:83536244-83536263 MS.gene022896:intron 35.0%
CTAATACTGAGAGGTTGAAT+TGG + chr8.1:83537166-83537185 MS.gene022896:CDS 35.0%
CTTTCCAATGTGCAATAGTT+TGG - chr8.1:83535770-83535789 None:intergenic 35.0%
CTTTCTGCATGTGAAACTAT+GGG + chr8.1:83535248-83535267 MS.gene022896:CDS 35.0%
GAGAAGAAGAATGTGTTTGA+AGG + chr8.1:83537057-83537076 MS.gene022896:CDS 35.0%
GATGTGATGAATGCAGTTAT+TGG + chr8.1:83535101-83535120 MS.gene022896:CDS 35.0%
GCATTGAAAGAAGCTGATAT+TGG + chr8.1:83536517-83536536 MS.gene022896:CDS 35.0%
GCTGATATTGGACTTTCAAT+GGG + chr8.1:83536529-83536548 MS.gene022896:CDS 35.0%
GGAAAAAGCAATGCTATCTT+GGG + chr8.1:83535623-83535642 MS.gene022896:CDS 35.0%
GGTGTTCACAAATTGAAATC+AGG + chr8.1:83535564-83535583 MS.gene022896:CDS 35.0%
GTGAATGTCAAAATGGTTAC+AGG + chr8.1:83536092-83536111 MS.gene022896:CDS 35.0%
GTTTCATTTGTGTCCTGATT+TGG - chr8.1:83536322-83536341 None:intergenic 35.0%
TACGAGAGTTTCTTGATCAA+TGG - chr8.1:83534187-83534206 None:intergenic 35.0%
TATGGATACATTAGGTGCTT+TGG + chr8.1:83536786-83536805 MS.gene022896:CDS 35.0%
TCAAAATACCATGATGGTTG+TGG + chr8.1:83535819-83535838 MS.gene022896:CDS 35.0%
TCAAAATTCCACAACCATCA+TGG - chr8.1:83535830-83535849 None:intergenic 35.0%
TCAATTCGACAACAAGTGTT+TGG + chr8.1:83534333-83534352 MS.gene022896:CDS 35.0%
TGATCAATGGTAAAAGAGTG+AGG - chr8.1:83534174-83534193 None:intergenic 35.0%
TGCAAAAATGCTCGTTACAT+CGG + chr8.1:83534851-83534870 MS.gene022896:CDS 35.0%
TGTTACAAATCACATGATCG+AGG - chr8.1:83535406-83535425 None:intergenic 35.0%
! AAAGAGCATGGAATCAAAGA+AGG + chr8.1:83534477-83534496 MS.gene022896:CDS 35.0%
! ACTATTTGCACTGATAAGAC+AGG + chr8.1:83535281-83535300 MS.gene022896:CDS 35.0%
! GAGCATTTTTGCATATCCAT+CGG - chr8.1:83534844-83534863 None:intergenic 35.0%
! TCGATCATGTGATTTGTAAC+AGG + chr8.1:83535405-83535424 MS.gene022896:intron 35.0%
! TGGTTCAAGTTTGTGAACAA+GGG - chr8.1:83533988-83534007 None:intergenic 35.0%
! TGTTATCAATTTTGTAGCGG+CGG + chr8.1:83536708-83536727 MS.gene022896:CDS 35.0%
! TTGTTTGTGTTGTTGGTGTT+TGG - chr8.1:83534033-83534052 None:intergenic 35.0%
!! AGAAGTTTGCTAATACTGAG+AGG + chr8.1:83537157-83537176 MS.gene022896:CDS 35.0%
!! AGAGAGTGGATTGTTTGTAT+TGG + chr8.1:83537189-83537208 MS.gene022896:CDS 35.0%
!! ATCAAAGAAGGTTGGTATGA+TGG + chr8.1:83534489-83534508 MS.gene022896:CDS 35.0%
!! CAAATTGATTTGGTTCGTAG+TGG + chr8.1:83534618-83534637 MS.gene022896:CDS 35.0%
!! CGAAAGCATTATTCAAGGTA+TGG + chr8.1:83535881-83535900 MS.gene022896:CDS 35.0%
!! CTGTTGATTCGATATTTCAC+TGG + chr8.1:83535020-83535039 MS.gene022896:CDS 35.0%
!! GATTCTGAATTCGAGTTTTC+AGG + chr8.1:83535591-83535610 MS.gene022896:CDS 35.0%
!!! AGGTGGTTTTTTGTAAGTGT+TGG - chr8.1:83534361-83534380 None:intergenic 35.0%
!!! AGGTGTGATTTTTGGTTTCT+TGG - chr8.1:83534118-83534137 None:intergenic 35.0%
!!! GAAGTGGAGTTTTGTTAAGA+AGG + chr8.1:83535733-83535752 MS.gene022896:CDS 35.0%
!!! GGCTGTTTTGGAATTGAAAA+TGG + chr8.1:83535644-83535663 MS.gene022896:CDS 35.0%
AAAATGCTCGTTACATCGGT+TGG + chr8.1:83534855-83534874 MS.gene022896:CDS 40.0%
AAATCAACCACGGTGAAAGA+TGG - chr8.1:83534144-83534163 None:intergenic 40.0%
AATGATGGCTGATCAAGCAA+TGG + chr8.1:83535217-83535236 MS.gene022896:CDS 40.0%
AATGGAGCTAGAGAGTTCAA+CGG + chr8.1:83535059-83535078 MS.gene022896:CDS 40.0%
ACTAACATCCTCAATCGGAA+AGG + chr8.1:83534962-83534981 MS.gene022896:CDS 40.0%
AGATGGAACAAATGATGCAC+CGG + chr8.1:83536495-83536514 MS.gene022896:CDS 40.0%
AGCATGGAATCAAAGAAGGT+TGG + chr8.1:83534481-83534500 MS.gene022896:CDS 40.0%
AGTGTCAATGTCACAGCTAA+TGG - chr8.1:83535179-83535198 None:intergenic 40.0%
CGGAAAAAGCAATGCTATCT+TGG + chr8.1:83535622-83535641 MS.gene022896:CDS 40.0%
CGGAATTCTTCAACCAAATC+AGG + chr8.1:83536306-83536325 MS.gene022896:CDS 40.0%
GAATATGCACCAACTTCCAT+TGG - chr8.1:83535483-83535502 None:intergenic 40.0%
GGACTTTCAATGGGAATTCA+AGG + chr8.1:83536538-83536557 MS.gene022896:CDS 40.0%
GGGAACACAAAGACTGATAA+TGG + chr8.1:83535041-83535060 MS.gene022896:CDS 40.0%
GGGAATTGTTGGTATGACAT+TGG + chr8.1:83537104-83537123 MS.gene022896:CDS 40.0%
GTTGGTATGAACACAACATG+GGG + chr8.1:83534873-83534892 MS.gene022896:CDS 40.0%
TCAGGACACAAATGAAACAG+TGG + chr8.1:83536324-83536343 MS.gene022896:CDS 40.0%
TCCATCTAGGAACAATCCAT+CGG - chr8.1:83534721-83534740 None:intergenic 40.0%
TGAAGGAGAGACAAACAAGA+TGG + chr8.1:83535968-83535987 MS.gene022896:CDS 40.0%
TGCTGGTGTGAATGTCAAAA+TGG + chr8.1:83536085-83536104 MS.gene022896:CDS 40.0%
! AATGCTATCTTGGGCTGTTT+TGG + chr8.1:83535632-83535651 MS.gene022896:CDS 40.0%
! AGTAAAGGTTTGTCTGAGAC+TGG - chr8.1:83537261-83537280 None:intergenic 40.0%
! GATGGAGTAGGTGTGATTTT+TGG - chr8.1:83534126-83534145 None:intergenic 40.0%
! GGTTGGTATGAACACAACAT+GGG + chr8.1:83534872-83534891 MS.gene022896:CDS 40.0%
! GGTTTAGAACCAATGGAAGT+TGG + chr8.1:83535471-83535490 MS.gene022896:CDS 40.0%
! GTGGTTCAAGTTTGTGAACA+AGG - chr8.1:83533989-83534008 None:intergenic 40.0%
! GTTTGTGCTACTCTTTCACT+TGG + chr8.1:83534444-83534463 MS.gene022896:CDS 40.0%
!! AAAGAAGGTTGGTATGATGG+TGG + chr8.1:83534492-83534511 MS.gene022896:CDS 40.0%
!! ATTGGTGCTTCAAGTTGTGA+TGG + chr8.1:83537122-83537141 MS.gene022896:CDS 40.0%
!! CATTGAGAAGTGTCTCAATG+TGG - chr8.1:83534008-83534027 None:intergenic 40.0%
!! TTGGCTTGGTTTAGAACCAA+TGG + chr8.1:83535464-83535483 MS.gene022896:CDS 40.0%
!!! AAGGTCACAAAGTTTTGGCT+TGG + chr8.1:83535450-83535469 MS.gene022896:CDS 40.0%
!!! GATAGCATTGCTTTTTCCGT+CGG - chr8.1:83535621-83535640 None:intergenic 40.0%
AAAGTTACCGACGAAGAGCT+TGG + chr8.1:83535942-83535961 MS.gene022896:CDS 45.0%
ACAGCTAATGGTAAACCCTC+AGG - chr8.1:83535167-83535186 None:intergenic 45.0%
ACATCCTCAATCGGAAAGGT+TGG + chr8.1:83534966-83534985 MS.gene022896:CDS 45.0%
AGAGGTTGAATTGGAGAGAG+TGG + chr8.1:83537175-83537194 MS.gene022896:CDS 45.0%
ATTAAGGATCCATGTCGTCC+AGG + chr8.1:83536032-83536051 MS.gene022896:CDS 45.0%
CAAACCAACCTTTCCGATTG+AGG - chr8.1:83534973-83534992 None:intergenic 45.0%
CAGAAACATGGAGGAGTTGA+AGG + chr8.1:83534240-83534259 MS.gene022896:CDS 45.0%
CAGCTAATGGTAAACCCTCA+GGG - chr8.1:83535166-83535185 None:intergenic 45.0%
CGCAACGGAAAAACCTACTA+AGG + chr8.1:83536813-83536832 MS.gene022896:CDS 45.0%
CTCTACATGATCACTCTCAC+CGG - chr8.1:83534775-83534794 None:intergenic 45.0%
CTCTCAACGAATGTCCATCT+AGG - chr8.1:83534734-83534753 None:intergenic 45.0%
GACACACTTCAGAAACATGG+AGG + chr8.1:83534231-83534250 MS.gene022896:CDS 45.0%
GCTACTCTTTCACTTGGCTT+TGG + chr8.1:83534450-83534469 MS.gene022896:CDS 45.0%
GGAGTTGCTCTCAATACAAC+TGG + chr8.1:83535540-83535559 MS.gene022896:CDS 45.0%
GGTCATGTAGTAGCTGTAAC+TGG + chr8.1:83536472-83536491 MS.gene022896:CDS 45.0%
GTAGTAGCTGTAACTGGAGA+TGG + chr8.1:83536478-83536497 MS.gene022896:CDS 45.0%
GTTAGGACTTGTCGGCATTA+AGG + chr8.1:83536016-83536035 MS.gene022896:CDS 45.0%
GTTGCTCTCAATACAACTGG+TGG + chr8.1:83535543-83535562 MS.gene022896:CDS 45.0%
TCCAGAACAAAAGTTGCCGA+TGG + chr8.1:83534825-83534844 MS.gene022896:CDS 45.0%
TGACATTCACACCAGCATGT+TGG - chr8.1:83536082-83536101 None:intergenic 45.0%
TTCAACTCCAAGCTCTTCGT+CGG - chr8.1:83535952-83535971 None:intergenic 45.0%
TTCGTCAATGCCGTTGCTTA+TGG - chr8.1:83534913-83534932 None:intergenic 45.0%
! CGGTTGGTATGAACACAACA+TGG + chr8.1:83534871-83534890 MS.gene022896:CDS 45.0%
! CTCAATCGGAAAGGTTGGTT+TGG + chr8.1:83534971-83534990 MS.gene022896:CDS 45.0%
! GTTGATGAATCGAGCATGAC+CGG + chr8.1:83534753-83534772 MS.gene022896:CDS 45.0%
! TCCATCGGCAACTTTTGTTC+TGG - chr8.1:83534829-83534848 None:intergenic 45.0%
!! AGAGGCTTTGTTCTACCAAC+AGG - chr8.1:83536856-83536875 None:intergenic 45.0%
!! GGCTTTGGAATCAAAGAGCA+TGG + chr8.1:83534465-83534484 MS.gene022896:CDS 45.0%
!! TTGGTCTAGCTGCTGTTTCT+TGG + chr8.1:83537208-83537227 MS.gene022896:CDS 45.0%
ACCACGGTGAAAGATGGAGT+AGG - chr8.1:83534138-83534157 None:intergenic 50.0%
ACCTACTCCATCTTTCACCG+TGG + chr8.1:83534134-83534153 MS.gene022896:CDS 50.0%
ATGTTGGCAAGCTTCAACCG+CGG - chr8.1:83536066-83536085 None:intergenic 50.0%
CTTCACACACGAAGAGAGGT+TGG + chr8.1:83536369-83536388 MS.gene022896:CDS 50.0%
GACGAAGAGCTTGGAGTTGA+AGG + chr8.1:83535951-83535970 MS.gene022896:CDS 50.0%
GCAACTTCACACACGAAGAG+AGG + chr8.1:83536365-83536384 MS.gene022896:CDS 50.0%
GTCGTTGTTGCTATCCCTGA+GGG + chr8.1:83535149-83535168 MS.gene022896:CDS 50.0%
GTTGAAGCTTGCCAACATGC+TGG + chr8.1:83536068-83536087 MS.gene022896:CDS 50.0%
TCTAGGAACAATCCATCGGC+TGG - chr8.1:83534717-83534736 None:intergenic 50.0%
TGTCGTTGTTGCTATCCCTG+AGG + chr8.1:83535148-83535167 MS.gene022896:CDS 50.0%
TTGGAAAGGAGCAGCAGAGA+TGG + chr8.1:83535782-83535801 MS.gene022896:CDS 50.0%
!! GCCGATGGATTGTTCCTAGA+TGG + chr8.1:83534717-83534736 MS.gene022896:CDS 50.0%
!! GCTGCTGTTTCTTGGCCAAT+TGG + chr8.1:83537216-83537235 MS.gene022896:CDS 50.0%
!!! CGAGTTTTCAGGTAGTCCGA+CGG + chr8.1:83535602-83535621 MS.gene022896:CDS 50.0%
GGTGATCAAGTACCAGCCGA+TGG + chr8.1:83534702-83534721 MS.gene022896:CDS 55.0%
GTCTTCACTCCTGGACGACA+TGG - chr8.1:83536044-83536063 None:intergenic 55.0%
TTTGTAGCGGCGGTTTCAGC+AGG + chr8.1:83536718-83536737 MS.gene022896:CDS 55.0%
!! AGGTGCTTTGGCTCTCGCAA+CGG + chr8.1:83536798-83536817 MS.gene022896:CDS 55.0%
TCAACCGCGGTCTTCACTCC+TGG - chr8.1:83536053-83536072 None:intergenic 60.0%
TCGTCCAGGAGTGAAGACCG+CGG + chr8.1:83536046-83536065 MS.gene022896:CDS 60.0%
!! TCGTAGTGGGCGCCGACAAA+AGG + chr8.1:83534632-83534651 MS.gene022896:CDS 60.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 83533976 83537311 83533976 ID=MS.gene022896
chr8.1 mRNA 83533976 83537311 83533976 ID=MS.gene022896.t1;Parent=MS.gene022896
chr8.1 exon 83533976 83535302 83533976 ID=MS.gene022896.t1.exon1;Parent=MS.gene022896.t1
chr8.1 CDS 83533976 83535302 83533976 ID=cds.MS.gene022896.t1;Parent=MS.gene022896.t1
chr8.1 exon 83535427 83536113 83535427 ID=MS.gene022896.t1.exon2;Parent=MS.gene022896.t1
chr8.1 CDS 83535427 83536113 83535427 ID=cds.MS.gene022896.t1;Parent=MS.gene022896.t1
chr8.1 exon 83536266 83537311 83536266 ID=MS.gene022896.t1.exon3;Parent=MS.gene022896.t1
chr8.1 CDS 83536266 83537311 83536266 ID=cds.MS.gene022896.t1;Parent=MS.gene022896.t1
Gene Sequence

>MS.gene022896

ATGTCAATGCCCTTGTTCACAAACTTGAACCACATTGAGACACTTCTCAATGCACCAAACACCAACAACACAAACAATATAAGATGGCACAATGCCTTCATGACAATCTATTGTTCTAGGGCTTTCATGTCACGTTCTACCAAGAAACCAAAAATCACACCTACTCCATCTTTCACCGTGGTTGATTTAACTTCACCTCACTCTTTTACCATTGATCAAGAAACTCTCGTAGATATTGTCAAAGAGAAAAACATTGACACACTTCAGAAACATGGAGGAGTTGAAGGTGTTGCTTCATCACTTAAAACTAACATTGAGTTTGGTATCAAAAGTCATGATGATGATTTTCAAGACATTTCAATTCGACAACAAGTGTTTGGTTCCAACACTTACAAAAAACCACCTTCTAAAAGTTTCTTTCATTTTGTTGTTGAAGCTTTTAAGGATTTAACAATTCTTATTCTTTTGGTTTGTGCTACTCTTTCACTTGGCTTTGGAATCAAAGAGCATGGAATCAAAGAAGGTTGGTATGATGGTGGTAGCATTTTTCTAGCTGTTTTCATTGTTATTTCAATGTCTGCAATAAGCAACTTTAAACAAAACAAACAATTTGATAAATTGTCTCAAGTGAGCAATGATATTCAAATTGATTTGGTTCGTAGTGGGCGCCGACAAAAGGTATCAATATTTGATATTGTTGTTGGTGATGTTGTTTGTTTGAAGATTGGTGATCAAGTACCAGCCGATGGATTGTTCCTAGATGGACATTCGTTGAGAGTTGATGAATCGAGCATGACCGGTGAGAGTGATCATGTAGAGATTAATCAAAACTTTCATCCTTTTTTGTTTTCCAGAACAAAAGTTGCCGATGGATATGCAAAAATGCTCGTTACATCGGTTGGTATGAACACAACATGGGGACAAATGATGAGTTCCATAAGCAACGGCATTGACGAAGAAACTCCTTTGCAAACAAGGTTGAATAAACTAACATCCTCAATCGGAAAGGTTGGTTTGGTTGTCGCATTTTTAGTCCTTGTAGTTCTGTTGATTCGATATTTCACTGGGAACACAAAGACTGATAATGGAGCTAGAGAGTTCAACGGTAGAAAGACTAGTTTTGATGATGTGATGAATGCAGTTATTGGAATTATTGCTGATGCTGTTACTATTGTCGTTGTTGCTATCCCTGAGGGTTTACCATTAGCTGTGACATTGACACTTGCTTATTCAATGAAGAAAATGATGGCTGATCAAGCAATGGTGAGAAAACTTTCTGCATGTGAAACTATGGGATCAGCTACTACTATTTGCACTGATAAGACAGGTACTATTTGAAATACAAAATTTAGTTATATTCTGTTAATAGATAGTTAATTTATTGATTCTTGACTTACTCTTTATACATAGAATATTTCACATACTCACCTCGATCATGTGATTTGTAACAGGTACACTCACTTTGAATCAAATGAAGGTCACAAAGTTTTGGCTTGGTTTAGAACCAATGGAAGTTGGTGCATATTCAAATGTTGATCCATTTGTTCTTCAATTGATCAAAGAAGGAGTTGCTCTCAATACAACTGGTGGTGTTCACAAATTGAAATCAGGTTCTGATTCTGAATTCGAGTTTTCAGGTAGTCCGACGGAAAAAGCAATGCTATCTTGGGCTGTTTTGGAATTGAAAATGGATATGGAGCACTTGACAAAAAGTTGTTCTATTCTTCAAGTTGAGACTTTCAACTCAAAGAAGAAAAGAAGTGGAGTTTTGTTAAGAAGGAATGTCGATAACCAAACTATTGCACATTGGAAAGGAGCAGCAGAGATGGTACTAAGAATGTGTTCAAAATACCATGATGGTTGTGGAATTTTGAAAGATCTTGACAAGGAATCCATGTTGAAATTCGAAAGCATTATTCAAGGTATGGCAGCTAGTAGTCTTCGTTGCATCGCTTTAGCGTATACAAAAGTTACCGACGAAGAGCTTGGAGTTGAAGGAGAGACAAACAAGATGGTAGTAAAAGACAATGGTTTAACATTGTTAGGACTTGTCGGCATTAAGGATCCATGTCGTCCAGGAGTGAAGACCGCGGTTGAAGCTTGCCAACATGCTGGTGTGAATGTCAAAATGGTTACAGGTATTACTAAAATATCTTATTTATCAATAACTTGATAATATAAAATTCTCTATTTATACGTACTACTCTATATGAAAATGATGAAAATAATAAGAATAATTAACCTAACTAATTGTTAATTAACCATTAACATACTTAATCTCTGATGACAGGTGACAATATTTTCACTGCAAAAGCTATAGCATTTGAATGCGGAATTCTTCAACCAAATCAGGACACAAATGAAACAGTGGTTGAAGGCGAACAATTTCGCAACTTCACACACGAAGAGAGGTTGGCGAAAGTTGAGAAAATCTCTGTGATGGCAAGATCTTCTCCTTTTGATAAACTTCTAATGGTTCAATGCTTAAAACAAAAAGGTCATGTAGTAGCTGTAACTGGAGATGGAACAAATGATGCACCGGCATTGAAAGAAGCTGATATTGGACTTTCAATGGGAATTCAAGGTACTGAAGTAGCAAAAGAGAGTTCAGATATTGTTATATTAGATGACAATTTTGCATCTATAGTGACAGTTATAAATTGGGGAAGATGTGTTTACAACAACATTCAAAAATTCATTCAATTTCAATTAACAGTGAATGTGGCAGCACTTGTTATCAATTTTGTAGCGGCGGTTTCAGCAGGTGAAGTTCCATTAACAGCAGTTCAGTTATTATGGGTGAATTTGATTATGGATACATTAGGTGCTTTGGCTCTCGCAACGGAAAAACCTACTAAGGATTTAATGGATGAAAAACCTGTTGGTAGAACAAAGCCTCTTATAACTAACATTATGTGGAGGAATCTTCTGTCACAAGCTTTGTACCAAATAGTTATTTTGTTAACTCTTCAATTCAAAGGTGAGATTATTTTTGGTGTGAGTTCAAAGGTAAATGACACATTGATATTCAACACATTTGTTCTTTGTCAAGTGTTTAATGAGTTTAATGCAAGGAAATTGGAGAAGAAGAATGTGTTTGAAGGGATATTTAAGAGCAAGTTGTTTTTGGGAATTGTTGGTATGACATTGGTGCTTCAAGTTGTGATGGTTGAGTTTTTGAAGAAGTTTGCTAATACTGAGAGGTTGAATTGGAGAGAGTGGATTGTTTGTATTGGTCTAGCTGCTGTTTCTTGGCCAATTGGTTTTGTTGTGAAGTTTATACCAGTCTCAGACAAACCTTTACTTGATTTTTTGAATTTTAGGAAGAGATATTGA
Protein sequence

>MS.gene022896.t1

MSMPLFTNLNHIETLLNAPNTNNTNNIRWHNAFMTIYCSRAFMSRSTKKPKITPTPSFTVVDLTSPHSFTIDQETLVDIVKEKNIDTLQKHGGVEGVASSLKTNIEFGIKSHDDDFQDISIRQQVFGSNTYKKPPSKSFFHFVVEAFKDLTILILLVCATLSLGFGIKEHGIKEGWYDGGSIFLAVFIVISMSAISNFKQNKQFDKLSQVSNDIQIDLVRSGRRQKVSIFDIVVGDVVCLKIGDQVPADGLFLDGHSLRVDESSMTGESDHVEINQNFHPFLFSRTKVADGYAKMLVTSVGMNTTWGQMMSSISNGIDEETPLQTRLNKLTSSIGKVGLVVAFLVLVVLLIRYFTGNTKTDNGAREFNGRKTSFDDVMNAVIGIIADAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADQAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTKFWLGLEPMEVGAYSNVDPFVLQLIKEGVALNTTGGVHKLKSGSDSEFEFSGSPTEKAMLSWAVLELKMDMEHLTKSCSILQVETFNSKKKRSGVLLRRNVDNQTIAHWKGAAEMVLRMCSKYHDGCGILKDLDKESMLKFESIIQGMAASSLRCIALAYTKVTDEELGVEGETNKMVVKDNGLTLLGLVGIKDPCRPGVKTAVEACQHAGVNVKMVTGDNIFTAKAIAFECGILQPNQDTNETVVEGEQFRNFTHEERLAKVEKISVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASIVTVINWGRCVYNNIQKFIQFQLTVNVAALVINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTKDLMDEKPVGRTKPLITNIMWRNLLSQALYQIVILLTLQFKGEIIFGVSSKVNDTLIFNTFVLCQVFNEFNARKLEKKNVFEGIFKSKLFLGIVGMTLVLQVVMVEFLKKFANTERLNWREWIVCIGLAAVSWPIGFVVKFIPVSDKPLLDFLNFRKRY