Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024706.t1 | XP_003610955.1 | 99.5 | 193 | 1 | 0 | 1 | 193 | 1 | 193 | 7.60E-102 | 379.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024706.t1 | F4I9J7 | 62.0 | 200 | 61 | 8 | 7 | 193 | 5 | 202 | 5.4e-56 | 218.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024706.t1 | G7K988 | 99.5 | 193 | 1 | 0 | 1 | 193 | 1 | 193 | 5.5e-102 | 379.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene014199 | MS.gene024706 | PPI |
| MS.gene063086 | MS.gene024706 | PPI |
| MS.gene30557 | MS.gene024706 | PPI |
| MS.gene22500 | MS.gene024706 | PPI |
| MS.gene021158 | MS.gene024706 | PPI |
| MS.gene68136 | MS.gene024706 | PPI |
| MS.gene68735 | MS.gene024706 | PPI |
| MS.gene28807 | MS.gene024706 | PPI |
| MS.gene41129 | MS.gene024706 | PPI |
| MS.gene072702 | MS.gene024706 | PPI |
| MS.gene07051 | MS.gene024706 | PPI |
| MS.gene003999 | MS.gene024706 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024706.t1 | MTR_5g008890 | 99.482 | 193 | 1 | 0 | 1 | 193 | 1 | 193 | 2.21e-142 | 394 |
| MS.gene024706.t1 | MTR_3g054060 | 48.276 | 174 | 52 | 5 | 1 | 171 | 31 | 169 | 1.28e-43 | 144 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024706.t1 | AT1G51510 | 64.246 | 179 | 54 | 6 | 9 | 178 | 7 | 184 | 1.17e-73 | 221 |
| MS.gene024706.t1 | AT5G64200 | 32.353 | 102 | 68 | 1 | 79 | 180 | 5 | 105 | 2.69e-11 | 61.6 |
| MS.gene024706.t1 | AT5G64200 | 32.353 | 102 | 68 | 1 | 79 | 180 | 5 | 105 | 2.69e-11 | 61.6 |
Find 50 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACAAACCATTTATGTTGAT+TGG | 0.221624 | 5.4:+3686315 | MS.gene024706:CDS |
| TATTGAAGGATGGATTATTT+TGG | 0.283878 | 5.4:+3683934 | MS.gene024706:CDS |
| AACTCTCGTCTCGCTGATTC+CGG | 0.283971 | 5.4:+3683776 | MS.gene024706:CDS |
| GAAAGCCCAATCAACATAAA+TGG | 0.296555 | 5.4:-3686321 | None:intergenic |
| CGCCGCCGACGGAGAAGCTT+TGG | 0.306556 | 5.4:+3683598 | MS.gene024706:CDS |
| AGTGATGGCGGATTTGAGTT+TGG | 0.318147 | 5.4:-3683693 | None:intergenic |
| GATGATTTGCAGAATGCTTT+TGG | 0.361063 | 5.4:+3683986 | MS.gene024706:CDS |
| GTGATGGCGGATTTGAGTTT+GGG | 0.363430 | 5.4:-3683692 | None:intergenic |
| CTGACGGAAACCGCGACCTT+TGG | 0.364553 | 5.4:-3683732 | None:intergenic |
| CTTCTAACTGACTCATTGAT+AGG | 0.375297 | 5.4:-3686353 | None:intergenic |
| ACAAACCATTTATGTTGATT+GGG | 0.381801 | 5.4:+3686316 | MS.gene024706:CDS |
| GCAGACCTCAGCGGCGCTCC+AGG | 0.401643 | 5.4:+3687394 | MS.gene024706:intron |
| CTCACTGCTGAGGGTGGTCC+TGG | 0.420911 | 5.4:+3683809 | MS.gene024706:CDS |
| GCCAGAGGAAGATGACTTGA+TGG | 0.429124 | 5.4:+3683628 | MS.gene024706:CDS |
| ATGAGTCAGTTAGAAGAAAC+AGG | 0.431891 | 5.4:+3686360 | MS.gene024706:CDS |
| GAGACGAGAGTTACGGTTAG+AGG | 0.454033 | 5.4:-3683765 | None:intergenic |
| GCGGATTTGAGTTTGGGATG+TGG | 0.456064 | 5.4:-3683686 | None:intergenic |
| CAAAGGTCGCGGTTTCCGTC+AGG | 0.458944 | 5.4:+3683733 | MS.gene024706:CDS |
| TTGAATCTTGATCGCCGTAC+TGG | 0.470728 | 5.4:+3684037 | MS.gene024706:CDS |
| TCTCCTCCTAGGAGGACTCC+TGG | 0.475841 | 5.4:-3687412 | None:intergenic |
| AGAGTTACGGTTAGAGGAAT+CGG | 0.477329 | 5.4:-3683759 | None:intergenic |
| TCCATCAAGTCATCTTCCTC+TGG | 0.480725 | 5.4:-3683629 | None:intergenic |
| GTTGATTGGGCTTTCAGCAG+TGG | 0.486700 | 5.4:+3686329 | MS.gene024706:CDS |
| CTCTATTCAGCGACGATGCA+AGG | 0.487696 | 5.4:+3683572 | None:intergenic |
| AATGCAATAGAGAATTTGAA+TGG | 0.500993 | 5.4:+3686278 | MS.gene024706:CDS |
| TGGGGATACGAACATCTTTG+AGG | 0.513262 | 5.4:-3683833 | None:intergenic |
| CCCTTTCAATATCTCCTCCT+AGG | 0.518724 | 5.4:-3687423 | None:intergenic |
| GGGATGTGGAGGAGAAGCTT+CGG | 0.519462 | 5.4:-3683672 | None:intergenic |
| AGCAGTGAGAGTATCGAAAC+CGG | 0.528470 | 5.4:-3683795 | None:intergenic |
| TTCGATACTCTCACTGCTGA+GGG | 0.535196 | 5.4:+3683800 | MS.gene024706:CDS |
| ATGCAAGGAAGCGCCGCCGA+CGG | 0.548735 | 5.4:+3683587 | MS.gene024706:CDS |
| GGCGCTCCAGGAGTCCTCCT+AGG | 0.551753 | 5.4:+3687406 | MS.gene024706:CDS |
| GGACTCCTGGAGCGCCGCTG+AGG | 0.554772 | 5.4:-3687399 | None:intergenic |
| ATGAGCGCTCTGAGGAAGCT+CGG | 0.562915 | 5.4:+3686255 | MS.gene024706:CDS |
| AATCAGCGAGACGAGAGTTA+CGG | 0.563114 | 5.4:-3683772 | None:intergenic |
| TACGAACATCTTTGAGGACC+AGG | 0.563747 | 5.4:-3683827 | None:intergenic |
| GATGACTTGATGGACGAAGA+AGG | 0.572561 | 5.4:+3683638 | MS.gene024706:CDS |
| GATTTGAGTTTGGGATGTGG+AGG | 0.573507 | 5.4:-3683683 | None:intergenic |
| AGCTTTGGATTTCGAGCCAG+AGG | 0.579650 | 5.4:+3683613 | MS.gene024706:CDS |
| ATCCAAAGCTTCTCCGTCGG+CGG | 0.583085 | 5.4:-3683600 | None:intergenic |
| TTTCGATACTCTCACTGCTG+AGG | 0.590321 | 5.4:+3683799 | MS.gene024706:CDS |
| TTTGGGAACGGAAGTGATGG+CGG | 0.614347 | 5.4:-3683705 | None:intergenic |
| GCTCCAGGAGTCCTCCTAGG+AGG | 0.642226 | 5.4:+3687409 | MS.gene024706:CDS |
| TTTCAATATCTCCTCCTAGG+AGG | 0.646524 | 5.4:-3687420 | None:intergenic |
| GATACTCTCACTGCTGAGGG+TGG | 0.647746 | 5.4:+3683803 | MS.gene024706:CDS |
| GCACCTTAACAAAACCAGTA+CGG | 0.658816 | 5.4:-3684051 | None:intergenic |
| TTTGGTGACTGGTGTACATG+AGG | 0.661358 | 5.4:+3683952 | MS.gene024706:CDS |
| TAGAGGAATCGGAATCCTGA+CGG | 0.677725 | 5.4:-3683748 | None:intergenic |
| GATTGAATATGAGCGCTCTG+AGG | 0.688874 | 5.4:+3686247 | MS.gene024706:CDS |
| GAAATCCAAAGCTTCTCCGT+CGG | 0.701772 | 5.4:-3683603 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTCTTAATAAAATAAGATA+AGG | - | chr5.4:3685987-3686006 | None:intergenic | 10.0% |
| !!! | TATCTTATTTTATTAAGAAA+AGG | + | chr5.4:3685987-3686006 | MS.gene024706:intron | 10.0% |
| !! | AAACTATGAAAAGTTTATAA+GGG | - | chr5.4:3687343-3687362 | None:intergenic | 15.0% |
| !! | AAATTGACAAAAATTGAAAT+TGG | - | chr5.4:3683856-3683875 | None:intergenic | 15.0% |
| !! | AATTGACAAAAATTGAAATT+GGG | - | chr5.4:3683855-3683874 | None:intergenic | 15.0% |
| !! | AATTTAAAAAAAAATACTGC+AGG | - | chr5.4:3685779-3685798 | None:intergenic | 15.0% |
| !! | ATTTAAAAAAAAATACTGCA+GGG | - | chr5.4:3685778-3685797 | None:intergenic | 15.0% |
| !! | TAAACTATGAAAAGTTTATA+AGG | - | chr5.4:3687344-3687363 | None:intergenic | 15.0% |
| !!! | TACTTTTCATTCTTAAATTA+TGG | + | chr5.4:3684292-3684311 | MS.gene024706:intron | 15.0% |
| !! | AACTATGAAAAGTTTATAAG+GGG | - | chr5.4:3687342-3687361 | None:intergenic | 20.0% |
| !! | AAGTTATTTAACGATAATCT+AGG | - | chr5.4:3687156-3687175 | None:intergenic | 20.0% |
| !! | ATTGACAAAAATTGAAATTG+GGG | - | chr5.4:3683854-3683873 | None:intergenic | 20.0% |
| !! | TATATATATATATGTGCAGT+AGG | - | chr5.4:3687013-3687032 | None:intergenic | 20.0% |
| !! | TTGAGAAATATATGGAAAAA+TGG | - | chr5.4:3684960-3684979 | None:intergenic | 20.0% |
| !! | TTTACATCATTTATTTGAGT+TGG | + | chr5.4:3686475-3686494 | MS.gene024706:intron | 20.0% |
| !! | TTTATAGACAGTGTATATTA+CGG | - | chr5.4:3685150-3685169 | None:intergenic | 20.0% |
| !!! | AAGAAACAGGTAATTTATTT+TGG | + | chr5.4:3686373-3686392 | MS.gene024706:intron | 20.0% |
| !!! | AATGCAGTTTTGATTTTTAA+AGG | + | chr5.4:3685823-3685842 | MS.gene024706:intron | 20.0% |
| !!! | CTTTGAAAAAAAAAAAAGGA+AGG | + | chr5.4:3684756-3684775 | MS.gene024706:intron | 20.0% |
| !!! | GCAAAAATAAATTTTACAGT+TGG | - | chr5.4:3686952-3686971 | None:intergenic | 20.0% |
| !!! | TGATAAGCATTTTGATTTTA+GGG | + | chr5.4:3686215-3686234 | MS.gene024706:intron | 20.0% |
| !!! | TGGTTTTATATTTATCTACA+GGG | + | chr5.4:3686393-3686412 | MS.gene024706:intron | 20.0% |
| !!! | TTGGTTTTATATTTATCTAC+AGG | + | chr5.4:3686392-3686411 | MS.gene024706:intron | 20.0% |
| ! | AAAACAAAACCCTCATAATT+TGG | - | chr5.4:3684568-3684587 | None:intergenic | 25.0% |
| ! | AAACAAAACCCTCATAATTT+GGG | - | chr5.4:3684567-3684586 | None:intergenic | 25.0% |
| ! | AAATTCCATAGTAAGAAAAG+TGG | - | chr5.4:3686698-3686717 | None:intergenic | 25.0% |
| ! | AAGTTGCTAAATAAAGTTAC+AGG | - | chr5.4:3686143-3686162 | None:intergenic | 25.0% |
| ! | AATCCATACATACAATGAAA+CGG | - | chr5.4:3687197-3687216 | None:intergenic | 25.0% |
| ! | AATGCAATAGAGAATTTGAA+TGG | + | chr5.4:3686278-3686297 | MS.gene024706:CDS | 25.0% |
| ! | AATTCAAGTCATGAATCAAA+TGG | + | chr5.4:3685244-3685263 | MS.gene024706:intron | 25.0% |
| ! | AGTGTATTAATCTATGTTGT+TGG | - | chr5.4:3684441-3684460 | None:intergenic | 25.0% |
| ! | ATAATTCTCTTCTTTGTAGA+TGG | + | chr5.4:3687102-3687121 | MS.gene024706:intron | 25.0% |
| ! | CAAATCTTCACATGATAAAA+TGG | - | chr5.4:3686185-3686204 | None:intergenic | 25.0% |
| ! | CAGAAGGTTAACAATAAAAA+AGG | - | chr5.4:3685035-3685054 | None:intergenic | 25.0% |
| ! | CTAAATAAAGTTACAGGAAA+AGG | - | chr5.4:3686137-3686156 | None:intergenic | 25.0% |
| ! | GTGTATCATTGTATCTATAT+GGG | - | chr5.4:3685390-3685409 | None:intergenic | 25.0% |
| ! | GTGTATTAATCTATGTTGTT+GGG | - | chr5.4:3684440-3684459 | None:intergenic | 25.0% |
| ! | TAGTTTAGCATTTGAATGTT+TGG | + | chr5.4:3687357-3687376 | MS.gene024706:intron | 25.0% |
| ! | TCATGACTTGAATTATTTGA+AGG | - | chr5.4:3685238-3685257 | None:intergenic | 25.0% |
| ! | TGGATTGAAAAATGAAGATA+TGG | + | chr5.4:3687122-3687141 | MS.gene024706:intron | 25.0% |
| ! | TGTGATAACAAATCATAATG+TGG | - | chr5.4:3686565-3686584 | None:intergenic | 25.0% |
| ! | TGTGTATCATTGTATCTATA+TGG | - | chr5.4:3685391-3685410 | None:intergenic | 25.0% |
| ! | TTACCATTAATCAATCACTT+AGG | - | chr5.4:3684997-3685016 | None:intergenic | 25.0% |
| ! | TTTGGAAGAAGGAAAAAAAA+AGG | - | chr5.4:3684658-3684677 | None:intergenic | 25.0% |
| !! | ACAAACCATTTATGTTGATT+GGG | + | chr5.4:3686316-3686335 | MS.gene024706:CDS | 25.0% |
| !! | CATTTTATCATGTGAAGATT+TGG | + | chr5.4:3686183-3686202 | MS.gene024706:intron | 25.0% |
| !! | CGATTTTCATTTCATTCTAA+TGG | - | chr5.4:3685334-3685353 | None:intergenic | 25.0% |
| !! | TGAATCAGAAGATCTATTTT+CGG | + | chr5.4:3685105-3685124 | MS.gene024706:intron | 25.0% |
| !! | TTTGAAGTAGGAAATGTATA+TGG | + | chr5.4:3684208-3684227 | MS.gene024706:intron | 25.0% |
| !!! | AATTGCGTGATTTTGATTTT+AGG | + | chr5.4:3683876-3683895 | MS.gene024706:intron | 25.0% |
| !!! | AGGGCTTTGAAAAAAAAAAA+AGG | + | chr5.4:3684752-3684771 | MS.gene024706:intron | 25.0% |
| !!! | ATTGCGTGATTTTGATTTTA+GGG | + | chr5.4:3683877-3683896 | MS.gene024706:intron | 25.0% |
| !!! | CTGATAAGCATTTTGATTTT+AGG | + | chr5.4:3686214-3686233 | MS.gene024706:intron | 25.0% |
| !!! | CTTTTTTATTGTTAACCTTC+TGG | + | chr5.4:3685033-3685052 | MS.gene024706:intron | 25.0% |
| !!! | GAAAATCGTTTTAGTGAATT+GGG | + | chr5.4:3685346-3685365 | MS.gene024706:intron | 25.0% |
| !!! | GTATAGATTGACTAGTTTTA+TGG | + | chr5.4:3684150-3684169 | MS.gene024706:intron | 25.0% |
| !!! | TATTGAAGGATGGATTATTT+TGG | + | chr5.4:3683934-3683953 | MS.gene024706:CDS | 25.0% |
| !!! | TGAAAATCGTTTTAGTGAAT+TGG | + | chr5.4:3685345-3685364 | MS.gene024706:intron | 25.0% |
| !!! | TTGATTTTTAAAGGATGTAG+TGG | + | chr5.4:3685832-3685851 | MS.gene024706:intron | 25.0% |
| AAAAGTTTATAAGGGGAAGA+AGG | - | chr5.4:3687335-3687354 | None:intergenic | 30.0% | |
| AACAAAACCCTCATAATTTG+GGG | - | chr5.4:3684566-3684585 | None:intergenic | 30.0% | |
| AAGCCTAAGTGATTGATTAA+TGG | + | chr5.4:3684991-3685010 | MS.gene024706:intron | 30.0% | |
| AAGTAGGAAATGTATATGGA+CGG | + | chr5.4:3684212-3684231 | MS.gene024706:intron | 30.0% | |
| AGAAAAGTGGATGAGATAAA+AGG | - | chr5.4:3686685-3686704 | None:intergenic | 30.0% | |
| ATCCATACATACAATGAAAC+GGG | - | chr5.4:3687196-3687215 | None:intergenic | 30.0% | |
| ATTAATCTATGTTGTTGGGA+GGG | - | chr5.4:3684436-3684455 | None:intergenic | 30.0% | |
| CAATGACTTGACTATAAACA+TGG | - | chr5.4:3686591-3686610 | None:intergenic | 30.0% | |
| CACAAACCATTTATGTTGAT+TGG | + | chr5.4:3686315-3686334 | MS.gene024706:CDS | 30.0% | |
| CATGTTTATAGTCAAGTCAT+TGG | + | chr5.4:3686589-3686608 | MS.gene024706:intron | 30.0% | |
| GAAGAAGGAAAAAAAAAGGA+AGG | - | chr5.4:3684654-3684673 | None:intergenic | 30.0% | |
| TATGAACATAGAAACAGAGA+TGG | - | chr5.4:3686064-3686083 | None:intergenic | 30.0% | |
| TATTAATCTATGTTGTTGGG+AGG | - | chr5.4:3684437-3684456 | None:intergenic | 30.0% | |
| TATTTGCCAATAGTGTTTGT+TGG | + | chr5.4:3686631-3686650 | MS.gene024706:intron | 30.0% | |
| TGAGATGATAACTTCAGTTA+AGG | - | chr5.4:3685582-3685601 | None:intergenic | 30.0% | |
| TGGATGAAATAGAAGACATT+GGG | + | chr5.4:3684785-3684804 | MS.gene024706:intron | 30.0% | |
| TTGGGAGTTTGAGAAATATA+TGG | - | chr5.4:3684968-3684987 | None:intergenic | 30.0% | |
| TTGTGAGTTTGTCAAAATCA+CGG | - | chr5.4:3687253-3687272 | None:intergenic | 30.0% | |
| ! | AAAATTTGATAACCATGCTC+CGG | - | chr5.4:3685086-3685105 | None:intergenic | 30.0% |
| ! | AACAAAGTTCCATGAAGTTT+TGG | + | chr5.4:3686445-3686464 | MS.gene024706:intron | 30.0% |
| ! | AATCTAAGGGTATGATTGTA+GGG | + | chr5.4:3684243-3684262 | MS.gene024706:intron | 30.0% |
| ! | ATTCAACTACATAACTTGTG+TGG | + | chr5.4:3686923-3686942 | MS.gene024706:intron | 30.0% |
| ! | GTTTTACAAACTTTCAAGAG+TGG | - | chr5.4:3686986-3687005 | None:intergenic | 30.0% |
| ! | TAATCTAAGGGTATGATTGT+AGG | + | chr5.4:3684242-3684261 | MS.gene024706:intron | 30.0% |
| ! | TTTTTGTAGCTATTGAAGGA+TGG | + | chr5.4:3683924-3683943 | MS.gene024706:intron | 30.0% |
| !!! | GATAGAAAGTGTTTTGAAGT+AGG | + | chr5.4:3684196-3684215 | MS.gene024706:intron | 30.0% |
| AAAAAAAAGGAAGGAGCAAG+TGG | + | chr5.4:3684765-3684784 | MS.gene024706:intron | 35.0% | |
| AAAAAAAAGGAAGGAGCAAG+TGG | - | chr5.4:3684784-3684765 | None:intergenic | 35.0% | |
| AAACCCAAACCAAAACTTCA+TGG | - | chr5.4:3686457-3686476 | None:intergenic | 35.0% | |
| AAACTCCACATCATGGTTAT+CGG | - | chr5.4:3685483-3685502 | None:intergenic | 35.0% | |
| AAATCTCGACTTAGATGGTT+TGG | - | chr5.4:3686742-3686761 | None:intergenic | 35.0% | |
| AAATGTATATGGACGGGTAA+TGG | + | chr5.4:3684219-3684238 | MS.gene024706:intron | 35.0% | |
| AACTAGTCAATCTATACGAG+TGG | - | chr5.4:3684147-3684166 | None:intergenic | 35.0% | |
| AATACAAAATCCCCCTCATT+TGG | + | chr5.4:3684841-3684860 | MS.gene024706:intron | 35.0% | |
| ACAAAACCCTCATAATTTGG+GGG | - | chr5.4:3684565-3684584 | None:intergenic | 35.0% | |
| ACAATGATACACACTAACTG+AGG | + | chr5.4:3685398-3685417 | MS.gene024706:intron | 35.0% | |
| ACACTAACTGAGGTTATTGA+TGG | + | chr5.4:3685408-3685427 | MS.gene024706:intron | 35.0% | |
| ACTAGTCAATCTATACGAGT+GGG | - | chr5.4:3684146-3684165 | None:intergenic | 35.0% | |
| ACTCAAAATTGTATTCGAGG+AGG | - | chr5.4:3684540-3684559 | None:intergenic | 35.0% | |
| AGTAGGAAATGTATATGGAC+GGG | + | chr5.4:3684213-3684232 | MS.gene024706:intron | 35.0% | |
| AGTGAATTGGGATTCAAGAT+GGG | + | chr5.4:3685358-3685377 | MS.gene024706:intron | 35.0% | |
| ATACAAAATCCCCCTCATTT+GGG | + | chr5.4:3684842-3684861 | MS.gene024706:intron | 35.0% | |
| ATGAAATAGAAGACATTGGG+AGG | + | chr5.4:3684788-3684807 | MS.gene024706:intron | 35.0% | |
| ATGAGTCAGTTAGAAGAAAC+AGG | + | chr5.4:3686360-3686379 | MS.gene024706:CDS | 35.0% | |
| ATGATAGCATTAGAGAGAGT+TGG | - | chr5.4:3686792-3686811 | None:intergenic | 35.0% | |
| ATGTGATGAGAATTGAGTGT+TGG | - | chr5.4:3686849-3686868 | None:intergenic | 35.0% | |
| CACTAACTGAGGTTATTGAT+GGG | + | chr5.4:3685409-3685428 | MS.gene024706:intron | 35.0% | |
| CATTGCTTAAACACAATTGC+AGG | - | chr5.4:3687294-3687313 | None:intergenic | 35.0% | |
| CTCAAAATTGTATTCGAGGA+GGG | - | chr5.4:3684539-3684558 | None:intergenic | 35.0% | |
| CTTAAACACAATTGCAGGTT+TGG | - | chr5.4:3687289-3687308 | None:intergenic | 35.0% | |
| GAAAGCCCAATCAACATAAA+TGG | - | chr5.4:3686324-3686343 | None:intergenic | 35.0% | |
| GAGATGGCAGAAAATTTACT+TGG | - | chr5.4:3686048-3686067 | None:intergenic | 35.0% | |
| GGAAAGTTAAGTCCAACTAA+CGG | - | chr5.4:3685615-3685634 | None:intergenic | 35.0% | |
| GGAACTCAAAATTGTATTCG+AGG | - | chr5.4:3684543-3684562 | None:intergenic | 35.0% | |
| GTGGATGAAATAGAAGACAT+TGG | + | chr5.4:3684784-3684803 | MS.gene024706:intron | 35.0% | |
| TAACTGTGTGTAGGTTATTG+TGG | + | chr5.4:3685882-3685901 | MS.gene024706:intron | 35.0% | |
| TAGTGAATTGGGATTCAAGA+TGG | + | chr5.4:3685357-3685376 | MS.gene024706:intron | 35.0% | |
| TCCATACATACAATGAAACG+GGG | - | chr5.4:3687195-3687214 | None:intergenic | 35.0% | |
| TGAAATAGAAGACATTGGGA+GGG | + | chr5.4:3684789-3684808 | MS.gene024706:intron | 35.0% | |
| TGATAGCATTAGAGAGAGTT+GGG | - | chr5.4:3686791-3686810 | None:intergenic | 35.0% | |
| TGATGAAATCTCGACTTAGA+TGG | - | chr5.4:3686747-3686766 | None:intergenic | 35.0% | |
| TTAATCTATGTTGTTGGGAG+GGG | - | chr5.4:3684435-3684454 | None:intergenic | 35.0% | |
| ! | AATATCAAGGTACCTTTCCT+CGG | - | chr5.4:3685063-3685082 | None:intergenic | 35.0% |
| ! | CAGAATGCTTTTGGTGAATA+TGG | + | chr5.4:3683995-3684014 | MS.gene024706:CDS | 35.0% |
| ! | CATATCTTTTCACCGTTAGT+TGG | + | chr5.4:3685600-3685619 | MS.gene024706:intron | 35.0% |
| ! | CTAAGGCTTTGTCTTTGTTT+GGG | - | chr5.4:3684703-3684722 | None:intergenic | 35.0% |
| ! | CTTCTAACTGACTCATTGAT+AGG | - | chr5.4:3686356-3686375 | None:intergenic | 35.0% |
| ! | GAATTATAGCCAGCTTTTGT+CGG | - | chr5.4:3685292-3685311 | None:intergenic | 35.0% |
| ! | TCTTTGTTTGGGAGTTTAGA+GGG | - | chr5.4:3684692-3684711 | None:intergenic | 35.0% |
| !! | CAATCACTTAGGCTTTGTTT+GGG | - | chr5.4:3684986-3685005 | None:intergenic | 35.0% |
| !! | CATCTTCACTTAGTTTGTGT+TGG | + | chr5.4:3686866-3686885 | MS.gene024706:intron | 35.0% |
| !! | CTCATCCACTTTTCTTACTA+TGG | + | chr5.4:3686690-3686709 | MS.gene024706:intron | 35.0% |
| !! | GATGATTTGCAGAATGCTTT+TGG | + | chr5.4:3683986-3684005 | MS.gene024706:CDS | 35.0% |
| !! | TCAATCACTTAGGCTTTGTT+TGG | - | chr5.4:3684987-3685006 | None:intergenic | 35.0% |
| !! | TGAGTCTTATTCCACAAAGT+GGG | + | chr5.4:3686520-3686539 | MS.gene024706:intron | 35.0% |
| !!! | ACCTTTGGTTTTTTTGGGAA+CGG | - | chr5.4:3683720-3683739 | None:intergenic | 35.0% |
| !!! | AGTTCCATGAAGTTTTGGTT+TGG | + | chr5.4:3686450-3686469 | MS.gene024706:intron | 35.0% |
| !!! | GCTGTTTTTGTAGCTATTGA+AGG | + | chr5.4:3683920-3683939 | MS.gene024706:intron | 35.0% |
| !!! | GTTCCATGAAGTTTTGGTTT+GGG | + | chr5.4:3686451-3686470 | MS.gene024706:intron | 35.0% |
| !!! | TATGATTGTAGGGTTTTGGA+GGG | + | chr5.4:3684253-3684272 | MS.gene024706:intron | 35.0% |
| AAACTCCCAAACAAAGCCTA+AGG | - | chr5.4:3684997-3684978 | None:intergenic | 40.0% | |
| AATGAAACGGGGTTGAAAGA+TGG | - | chr5.4:3687184-3687203 | None:intergenic | 40.0% | |
| ACCCCGTTTCATTGTATGTA+TGG | + | chr5.4:3687191-3687210 | MS.gene024706:intron | 40.0% | |
| ACGTGTGGAAAGACTAGAAA+GGG | - | chr5.4:3686826-3686845 | None:intergenic | 40.0% | |
| AGAGTTACGGTTAGAGGAAT+CGG | - | chr5.4:3683762-3683781 | None:intergenic | 40.0% | |
| AGATACCGATAACCATGATG+TGG | + | chr5.4:3685475-3685494 | MS.gene024706:intron | 40.0% | |
| AGGAAATAGAGGAGTTTGAG+AGG | - | chr5.4:3684622-3684641 | None:intergenic | 40.0% | |
| ATTGAGAGGTAGGTAAAGTG+AGG | + | chr5.4:3685504-3685523 | MS.gene024706:intron | 40.0% | |
| CAAAACCCTCATAATTTGGG+GGG | - | chr5.4:3684564-3684583 | None:intergenic | 40.0% | |
| CAGTTAAGGTTGCATCAATC+AGG | - | chr5.4:3685568-3685587 | None:intergenic | 40.0% | |
| CAGTTTCAGAAACTGCAGAT+TGG | + | chr5.4:3686107-3686126 | MS.gene024706:intron | 40.0% | |
| CATTAGAGAGAGTTGGGTAA+AGG | - | chr5.4:3686785-3686804 | None:intergenic | 40.0% | |
| CCAAACAAAGACAAAGCCTT+AGG | + | chr5.4:3684701-3684720 | MS.gene024706:intron | 40.0% | |
| CCTAACAAGTAACTGTGTGT+AGG | + | chr5.4:3685873-3685892 | MS.gene024706:intron | 40.0% | |
| CCTACACACAGTTACTTGTT+AGG | - | chr5.4:3685876-3685895 | None:intergenic | 40.0% | |
| CTCAATCAAACTCCACATCA+TGG | - | chr5.4:3685490-3685509 | None:intergenic | 40.0% | |
| GAAATAGAAGACATTGGGAG+GGG | + | chr5.4:3684790-3684809 | MS.gene024706:intron | 40.0% | |
| GAAATAGAGGAGTTTGAGAG+GGG | - | chr5.4:3684620-3684639 | None:intergenic | 40.0% | |
| GACTCAGTAGTTGCTGTAAT+AGG | - | chr5.4:3686506-3686525 | None:intergenic | 40.0% | |
| GCACCTTAACAAAACCAGTA+CGG | - | chr5.4:3684054-3684073 | None:intergenic | 40.0% | |
| GGAAATAGAGGAGTTTGAGA+GGG | - | chr5.4:3684621-3684640 | None:intergenic | 40.0% | |
| TACAAAATCCCCCTCATTTG+GGG | + | chr5.4:3684843-3684862 | MS.gene024706:intron | 40.0% | |
| TCATGAATCAAATGGCAAGC+TGG | + | chr5.4:3685252-3685271 | MS.gene024706:intron | 40.0% | |
| TCCATTTCATGTCTCAGTCA+TGG | + | chr5.4:3685632-3685651 | MS.gene024706:intron | 40.0% | |
| TCCGTTCCCAAAAAAACCAA+AGG | + | chr5.4:3683716-3683735 | MS.gene024706:CDS | 40.0% | |
| TGATGTGGAGTTTGATTGAG+AGG | + | chr5.4:3685490-3685509 | MS.gene024706:intron | 40.0% | |
| TTCAAGAGTGGAGTATGTGT+TGG | - | chr5.4:3686974-3686993 | None:intergenic | 40.0% | |
| TTCCATTGCCTTTCGCAATT+CGG | + | chr5.4:3686656-3686675 | MS.gene024706:intron | 40.0% | |
| ! | AGGGTATGATTGTAGGGTTT+TGG | + | chr5.4:3684249-3684268 | MS.gene024706:intron | 40.0% |
| ! | ATATCAAGGTACCTTTCCTC+GGG | - | chr5.4:3685062-3685081 | None:intergenic | 40.0% |
| ! | CAATTGCAGGTTTGGTAGAT+TGG | - | chr5.4:3687281-3687300 | None:intergenic | 40.0% |
| ! | CACACAGTTACTTGTTAGGA+AGG | - | chr5.4:3685872-3685891 | None:intergenic | 40.0% |
| ! | CCTAAGGCTTTGTCTTTGTT+TGG | - | chr5.4:3684704-3684723 | None:intergenic | 40.0% |
| ! | GACGGGTAATGGTAATCTAA+GGG | + | chr5.4:3684230-3684249 | MS.gene024706:intron | 40.0% |
| ! | GTCTTTGTTTGGGAGTTTAG+AGG | - | chr5.4:3684693-3684712 | None:intergenic | 40.0% |
| ! | TTAGATGGTTTGGACATGTG+TGG | - | chr5.4:3686732-3686751 | None:intergenic | 40.0% |
| ! | TTGACCTCAAGCTGTTACTT+TGG | + | chr5.4:3685688-3685707 | MS.gene024706:intron | 40.0% |
| !! | ACAAAGCCTTAGGCTTTGTT+TGG | + | chr5.4:3684711-3684730 | MS.gene024706:intron | 40.0% |
| !! | CAAAGCCTTAGGCTTTGTTT+GGG | + | chr5.4:3684712-3684731 | MS.gene024706:intron | 40.0% |
| !! | CTGAGTCTTATTCCACAAAG+TGG | + | chr5.4:3686519-3686538 | MS.gene024706:intron | 40.0% |
| !! | GAGTCTTATTCCACAAAGTG+GGG | + | chr5.4:3686521-3686540 | MS.gene024706:intron | 40.0% |
| !! | GCTTTGTTTGGGAGTTTAGA+GGG | + | chr5.4:3684723-3684742 | MS.gene024706:intron | 40.0% |
| !! | GGAAAGGTACCTTGATATTC+CGG | + | chr5.4:3685064-3685083 | MS.gene024706:intron | 40.0% |
| !! | GTATGATTGTAGGGTTTTGG+AGG | + | chr5.4:3684252-3684271 | MS.gene024706:intron | 40.0% |
| !! | TGACCTCAAGCTGTTACTTT+GGG | + | chr5.4:3685689-3685708 | MS.gene024706:intron | 40.0% |
| !! | TTCTTCGTCGTTTTCTACGA+TGG | + | chr5.4:3686891-3686910 | MS.gene024706:intron | 40.0% |
| !!! | ATGATTGTAGGGTTTTGGAG+GGG | + | chr5.4:3684254-3684273 | MS.gene024706:intron | 40.0% |
| !!! | GGATGGATTATTTTGGTGAC+TGG | + | chr5.4:3683941-3683960 | MS.gene024706:CDS | 40.0% |
| !!! | TATTCGAGGAGGGTTTTGAA+GGG | - | chr5.4:3684529-3684548 | None:intergenic | 40.0% |
| !!! | TTTTGAGTTCCCCCAAATGA+GGG | - | chr5.4:3684856-3684875 | None:intergenic | 40.0% |
| !!! | TTTTTGAGTTCCCCCAAATG+AGG | - | chr5.4:3684857-3684876 | None:intergenic | 40.0% |
| !!! | TTTTTTGGGAACGGAAGTGA+TGG | - | chr5.4:3683711-3683730 | None:intergenic | 40.0% |
| AAAAAGGAAGGAGCAAGTGG+AGG | - | chr5.4:3684787-3684768 | None:intergenic | 45.0% | |
| AAAGGCAACCGAATTGCGAA+AGG | - | chr5.4:3686667-3686686 | None:intergenic | 45.0% | |
| AACCATGCTCCGGAATATCA+AGG | - | chr5.4:3685076-3685095 | None:intergenic | 45.0% | |
| AACCCCAAAGTAACAGCTTG+AGG | - | chr5.4:3685695-3685714 | None:intergenic | 45.0% | |
| AACCGAATTGCGAAAGGCAA+TGG | - | chr5.4:3686661-3686680 | None:intergenic | 45.0% | |
| AATCAGCGAGACGAGAGTTA+CGG | - | chr5.4:3683775-3683794 | None:intergenic | 45.0% | |
| ACAAAATCCCCCTCATTTGG+GGG | + | chr5.4:3684844-3684863 | MS.gene024706:intron | 45.0% | |
| CAATGTTGACCGACAAAAGC+TGG | + | chr5.4:3685280-3685299 | MS.gene024706:intron | 45.0% | |
| CCCAAAAAAACCAAAGGTCG+CGG | + | chr5.4:3683722-3683741 | MS.gene024706:CDS | 45.0% | |
| CTTATTCCACAAAGTGGGGT+TGG | + | chr5.4:3686525-3686544 | MS.gene024706:intron | 45.0% | |
| GAAATCCAAAGCTTCTCCGT+CGG | - | chr5.4:3683606-3683625 | None:intergenic | 45.0% | |
| GAATTGCGAAAGGCAATGGA+AGG | - | chr5.4:3686657-3686676 | None:intergenic | 45.0% | |
| GACGTGTGGAAAGACTAGAA+AGG | - | chr5.4:3686827-3686846 | None:intergenic | 45.0% | |
| GAGTTCCCCCCAAATTATGA+GGG | + | chr5.4:3684556-3684575 | MS.gene024706:intron | 45.0% | |
| GATTGAATATGAGCGCTCTG+AGG | + | chr5.4:3686247-3686266 | MS.gene024706:CDS | 45.0% | |
| GCCATGACTGAGACATGAAA+TGG | - | chr5.4:3685636-3685655 | None:intergenic | 45.0% | |
| GGAAGGCCAACAAACACTAT+TGG | - | chr5.4:3686640-3686659 | None:intergenic | 45.0% | |
| GGAGTTTAGAGGGAAGTGAA+GGG | + | chr5.4:3684733-3684752 | MS.gene024706:intron | 45.0% | |
| GTCGAAGATTGTTCCAGCAT+GGG | + | chr5.4:3685526-3685545 | MS.gene024706:intron | 45.0% | |
| GTGGAAAGACTAGAAAGGGT+AGG | - | chr5.4:3686822-3686841 | None:intergenic | 45.0% | |
| GTGGAGTTTGATTGAGAGGT+AGG | + | chr5.4:3685494-3685513 | MS.gene024706:intron | 45.0% | |
| TACCTTGATATTCCGGAGCA+TGG | + | chr5.4:3685071-3685090 | MS.gene024706:intron | 45.0% | |
| TAGAGGAATCGGAATCCTGA+CGG | - | chr5.4:3683751-3683770 | None:intergenic | 45.0% | |
| TCCATCAAGTCATCTTCCTC+TGG | - | chr5.4:3683632-3683651 | None:intergenic | 45.0% | |
| TGAGATCAAAGCAGCGAAAG+TGG | - | chr5.4:3685964-3685983 | None:intergenic | 45.0% | |
| TGAGTTCCCCCCAAATTATG+AGG | + | chr5.4:3684555-3684574 | MS.gene024706:intron | 45.0% | |
| TGGGGATACGAACATCTTTG+AGG | - | chr5.4:3683836-3683855 | None:intergenic | 45.0% | |
| TTCGATACTCTCACTGCTGA+GGG | + | chr5.4:3683800-3683819 | MS.gene024706:CDS | 45.0% | |
| TTGAATCTTGATCGCCGTAC+TGG | + | chr5.4:3684037-3684056 | MS.gene024706:CDS | 45.0% | |
| TTTCGATACTCTCACTGCTG+AGG | + | chr5.4:3683799-3683818 | MS.gene024706:CDS | 45.0% | |
| TTTGGGAGTTTAGAGGGCAA+GGG | - | chr5.4:3684686-3684705 | None:intergenic | 45.0% | |
| ! | GATGACTTGATGGACGAAGA+AGG | + | chr5.4:3683638-3683657 | MS.gene024706:CDS | 45.0% |
| ! | GATTTGAGTTTGGGATGTGG+AGG | - | chr5.4:3683686-3683705 | None:intergenic | 45.0% |
| ! | GGACGGGTAATGGTAATCTA+AGG | + | chr5.4:3684229-3684248 | MS.gene024706:intron | 45.0% |
| ! | TACGAACATCTTTGAGGACC+AGG | - | chr5.4:3683830-3683849 | None:intergenic | 45.0% |
| ! | TATGTTGTTGGGAGGGGTTT+TGG | - | chr5.4:3684429-3684448 | None:intergenic | 45.0% |
| ! | TGACATTTTGCAGACCTCAG+CGG | + | chr5.4:3687385-3687404 | MS.gene024706:intron | 45.0% |
| ! | TTTGAGTTCCCCCAAATGAG+GGG | - | chr5.4:3684855-3684874 | None:intergenic | 45.0% |
| ! | TTTGGTGACTGGTGTACATG+AGG | + | chr5.4:3683952-3683971 | MS.gene024706:CDS | 45.0% |
| !! | AGAATTGAGTGTTGGACGTG+TGG | - | chr5.4:3686841-3686860 | None:intergenic | 45.0% |
| !! | AGCAGTGAGAGTATCGAAAC+CGG | - | chr5.4:3683798-3683817 | None:intergenic | 45.0% |
| !! | AGTGATGGCGGATTTGAGTT+TGG | - | chr5.4:3683696-3683715 | None:intergenic | 45.0% |
| !! | CTGTTACTTTGGGGTTCAGA+TGG | + | chr5.4:3685699-3685718 | MS.gene024706:intron | 45.0% |
| !! | GACCTCAAGCTGTTACTTTG+GGG | + | chr5.4:3685690-3685709 | MS.gene024706:intron | 45.0% |
| !! | GGCTTTGTTTGGGAGTTTAG+AGG | + | chr5.4:3684722-3684741 | MS.gene024706:intron | 45.0% |
| !! | GTATTCGAGGAGGGTTTTGA+AGG | - | chr5.4:3684530-3684549 | None:intergenic | 45.0% |
| !! | GTGATGGCGGATTTGAGTTT+GGG | - | chr5.4:3683695-3683714 | None:intergenic | 45.0% |
| !!! | ACCGCGACCTTTGGTTTTTT+TGG | - | chr5.4:3683726-3683745 | None:intergenic | 45.0% |
| !!! | AGGAGGGTTTTGAAGGGATT+TGG | - | chr5.4:3684523-3684542 | None:intergenic | 45.0% |
| !!! | CCGCGACCTTTGGTTTTTTT+GGG | - | chr5.4:3683725-3683744 | None:intergenic | 45.0% |
| !!! | GGGTTTTGAAGGGATTTGGA+AGG | - | chr5.4:3684519-3684538 | None:intergenic | 45.0% |
| !!! | TCGCCGTACTGGTTTTGTTA+AGG | + | chr5.4:3684048-3684067 | MS.gene024706:CDS | 45.0% |
| !! | AATATTTAAAAAATATTTAG+AGG | - | chr5.4:3686615-3686634 | None:intergenic | 5.0% |
| !!! | TGTATATAAATTTTATAAAA+TGG | + | chr5.4:3685740-3685759 | MS.gene024706:intron | 5.0% |
| ATAGAAGACATTGGGAGGGG+AGG | + | chr5.4:3684793-3684812 | MS.gene024706:intron | 50.0% | |
| ATAGAGGAGTTTGAGAGGGG+AGG | - | chr5.4:3684617-3684636 | None:intergenic | 50.0% | |
| ATGTAGCCAACCCCACTTTG+TGG | - | chr5.4:3686534-3686553 | None:intergenic | 50.0% | |
| GAGACGAGAGTTACGGTTAG+AGG | - | chr5.4:3683768-3683787 | None:intergenic | 50.0% | |
| GCCAGAGGAAGATGACTTGA+TGG | + | chr5.4:3683628-3683647 | MS.gene024706:CDS | 50.0% | |
| GGAGCAAGTGGAGGAAATAG+AGG | - | chr5.4:3684633-3684652 | None:intergenic | 50.0% | |
| GGGAGTTTAGAGGGAAGTGA+AGG | + | chr5.4:3684732-3684751 | MS.gene024706:intron | 50.0% | |
| GGTCGAAGATTGTTCCAGCA+TGG | + | chr5.4:3685525-3685544 | MS.gene024706:intron | 50.0% | |
| GTTGATTGGGCTTTCAGCAG+TGG | + | chr5.4:3686329-3686348 | MS.gene024706:CDS | 50.0% | |
| GTTTGGGAGTTTAGAGGGCA+AGG | - | chr5.4:3684687-3684706 | None:intergenic | 50.0% | |
| TAGAAGACATTGGGAGGGGA+GGG | + | chr5.4:3684794-3684813 | MS.gene024706:intron | 50.0% | |
| TAGAGGAGTTTGAGAGGGGA+GGG | - | chr5.4:3684616-3684635 | None:intergenic | 50.0% | |
| TCCAGCATGGGATCGAACTT+GGG | + | chr5.4:3685538-3685557 | MS.gene024706:intron | 50.0% | |
| TTCCAGCATGGGATCGAACT+TGG | + | chr5.4:3685537-3685556 | MS.gene024706:intron | 50.0% | |
| TTGAGTTCCCCCAAATGAGG+GGG | - | chr5.4:3684854-3684873 | None:intergenic | 50.0% | |
| TTTGGGAACGGAAGTGATGG+CGG | - | chr5.4:3683708-3683727 | None:intergenic | 50.0% | |
| ! | GATGGTTTGGACATGTGTGG+AGG | - | chr5.4:3686729-3686748 | None:intergenic | 50.0% |
| ! | GCGGATTTGAGTTTGGGATG+TGG | - | chr5.4:3683689-3683708 | None:intergenic | 50.0% |
| !! | AACTCTCGTCTCGCTGATTC+CGG | + | chr5.4:3683776-3683795 | MS.gene024706:CDS | 50.0% |
| !! | ACAAAGTGGGGTTGGCTACA+TGG | + | chr5.4:3686533-3686552 | MS.gene024706:intron | 50.0% |
| !! | AGCTTTGGATTTCGAGCCAG+AGG | + | chr5.4:3683613-3683632 | MS.gene024706:CDS | 50.0% |
| !! | GTTAACCTTCTGGTTTCCCG+AGG | + | chr5.4:3685043-3685062 | MS.gene024706:intron | 50.0% |
| !!! | ATTGTAGGGTTTTGGAGGGG+AGG | + | chr5.4:3684257-3684276 | MS.gene024706:intron | 50.0% |
| !!! | CAAGGGAGGGTTTTGGAAGA+AGG | - | chr5.4:3684669-3684688 | None:intergenic | 50.0% |
| !!! | TTGTAGGGTTTTGGAGGGGA+GGG | + | chr5.4:3684258-3684277 | MS.gene024706:intron | 50.0% |
| ACCCAAGTTCGATCCCATGC+TGG | - | chr5.4:3685542-3685561 | None:intergenic | 55.0% | |
| AGTTTGAGAGGGGAGGGCTT+TGG | - | chr5.4:3684610-3684629 | None:intergenic | 55.0% | |
| ATCCAAAGCTTCTCCGTCGG+CGG | - | chr5.4:3683603-3683622 | None:intergenic | 55.0% | |
| CCTTTCCTCGGGAAACCAGA+AGG | - | chr5.4:3685051-3685070 | None:intergenic | 55.0% | |
| GATACTCTCACTGCTGAGGG+TGG | + | chr5.4:3683803-3683822 | MS.gene024706:CDS | 55.0% | |
| GGAGTTTAGAGGGCAAGGGA+GGG | - | chr5.4:3684682-3684701 | None:intergenic | 55.0% | |
| GGGATGTGGAGGAGAAGCTT+CGG | - | chr5.4:3683675-3683694 | None:intergenic | 55.0% | |
| GTTTGAGAGGGGAGGGCTTT+GGG | - | chr5.4:3684609-3684628 | None:intergenic | 55.0% | |
| TTTGAGAGGGGAGGGCTTTG+GGG | - | chr5.4:3684608-3684627 | None:intergenic | 55.0% | |
| ! | ATACTGCAGGGAGTGCAGTG+AGG | - | chr5.4:3685766-3685785 | None:intergenic | 55.0% |
| ! | ATTGGGAGGGGAGGGCTTTT+GGG | + | chr5.4:3684802-3684821 | MS.gene024706:intron | 55.0% |
| ! | TAGAGGGCAAGGGAGGGTTT+TGG | - | chr5.4:3684676-3684695 | None:intergenic | 55.0% |
| !! | ATGAGCGCTCTGAGGAAGCT+CGG | + | chr5.4:3686255-3686274 | MS.gene024706:CDS | 55.0% |
| !! | CCTTCTGGTTTCCCGAGGAA+AGG | + | chr5.4:3685048-3685067 | MS.gene024706:intron | 55.0% |
| !! | GTTGTTGGGAGGGGTTTTGG+AGG | - | chr5.4:3684426-3684445 | None:intergenic | 55.0% |
| !!! | TGTAGGGTTTTGGAGGGGAG+GGG | + | chr5.4:3684259-3684278 | MS.gene024706:intron | 55.0% |
| CAAAGGTCGCGGTTTCCGTC+AGG | + | chr5.4:3683733-3683752 | MS.gene024706:CDS | 60.0% | |
| CTGACGGAAACCGCGACCTT+TGG | - | chr5.4:3683735-3683754 | None:intergenic | 60.0% | |
| GGGAGTTTAGAGGGCAAGGG+AGG | - | chr5.4:3684683-3684702 | None:intergenic | 60.0% | |
| TCTCCTCCTAGGAGGACTCC+TGG | - | chr5.4:3687415-3687434 | None:intergenic | 60.0% | |
| ! | CATTGGGAGGGGAGGGCTTT+TGG | + | chr5.4:3684801-3684820 | MS.gene024706:intron | 60.0% |
| ! | TTGAGAGGGGAGGGCTTTGG+GGG | - | chr5.4:3684607-3684626 | None:intergenic | 60.0% |
| ! | TTGGGAGGGGAGGGCTTTTG+GGG | + | chr5.4:3684803-3684822 | MS.gene024706:intron | 60.0% |
| !!! | GTAGGGTTTTGGAGGGGAGG+GGG | + | chr5.4:3684260-3684279 | MS.gene024706:intron | 60.0% |
| CTCACTGCTGAGGGTGGTCC+TGG | + | chr5.4:3683809-3683828 | MS.gene024706:CDS | 65.0% | |
| GCTCCAGGAGTCCTCCTAGG+AGG | + | chr5.4:3687409-3687428 | MS.gene024706:CDS | 65.0% | |
| !! | ATGCAAGGAAGCGCCGCCGA+CGG | + | chr5.4:3683587-3683606 | MS.gene024706:CDS | 65.0% |
| !! | TGAGAGGGGAGGGCTTTGGG+GGG | - | chr5.4:3684606-3684625 | None:intergenic | 65.0% |
| !! | TTTTGGAGGGGAGGGGGTGG+AGG | + | chr5.4:3684266-3684285 | MS.gene024706:intron | 65.0% |
| CGCCGCCGACGGAGAAGCTT+TGG | + | chr5.4:3683598-3683617 | MS.gene024706:CDS | 70.0% | |
| GGCGCTCCAGGAGTCCTCCT+AGG | + | chr5.4:3687406-3687425 | MS.gene024706:CDS | 70.0% | |
| !!! | GGGTTTTGGAGGGGAGGGGG+TGG | + | chr5.4:3684263-3684282 | MS.gene024706:intron | 70.0% |
| GCAGACCTCAGCGGCGCTCC+AGG | + | chr5.4:3687394-3687413 | MS.gene024706:intron | 75.0% | |
| !! | GGACTCCTGGAGCGCCGCTG+AGG | - | chr5.4:3687402-3687421 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 3683587 | 3687440 | 3683587 | ID=MS.gene024706 |
| chr5.4 | mRNA | 3683587 | 3687440 | 3683587 | ID=MS.gene024706.t1;Parent=MS.gene024706 |
| chr5.4 | exon | 3683587 | 3683842 | 3683587 | ID=MS.gene024706.t1.exon1;Parent=MS.gene024706.t1 |
| chr5.4 | CDS | 3683587 | 3683842 | 3683587 | ID=cds.MS.gene024706.t1;Parent=MS.gene024706.t1 |
| chr5.4 | exon | 3683933 | 3684069 | 3683933 | ID=MS.gene024706.t1.exon2;Parent=MS.gene024706.t1 |
| chr5.4 | CDS | 3683933 | 3684069 | 3683933 | ID=cds.MS.gene024706.t1;Parent=MS.gene024706.t1 |
| chr5.4 | exon | 3686236 | 3686381 | 3686236 | ID=MS.gene024706.t1.exon3;Parent=MS.gene024706.t1 |
| chr5.4 | CDS | 3686236 | 3686381 | 3686236 | ID=cds.MS.gene024706.t1;Parent=MS.gene024706.t1 |
| chr5.4 | exon | 3687398 | 3687440 | 3687398 | ID=MS.gene024706.t1.exon4;Parent=MS.gene024706.t1 |
| chr5.4 | CDS | 3687398 | 3687440 | 3687398 | ID=cds.MS.gene024706.t1;Parent=MS.gene024706.t1 |
| Gene Sequence |
| Protein sequence |
