AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene025057

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene025057.t1 MTR_2g060350 95.612 433 19 0 1 433 12 444 0.0 879
MS.gene025057.t1 MTR_3g030540 60.185 432 163 5 3 432 13 437 0.0 516
MS.gene025057.t1 MTR_1g052315 53.571 420 183 7 17 430 17 430 1.63e-149 432
MS.gene025057.t1 MTR_7g091850 51.020 441 200 7 2 433 13 446 5.81e-139 405
MS.gene025057.t1 MTR_7g091840 53.191 329 146 5 51 374 53 378 1.44e-117 348
MS.gene025057.t1 MTR_2g103410 46.361 371 192 5 62 428 58 425 2.89e-113 340
MS.gene025057.t1 MTR_8g065030 40.326 429 234 8 4 428 19 429 2.42e-110 333
MS.gene025057.t1 MTR_6g005630 43.440 343 181 7 65 404 47 379 4.12e-92 285
MS.gene025057.t1 MTR_4g094715 43.251 363 191 7 57 408 59 417 3.41e-90 281
MS.gene025057.t1 MTR_7g110050 41.144 367 206 6 51 408 55 420 4.79e-90 281
MS.gene025057.t1 MTR_2g049400 42.408 382 202 10 54 429 19 388 2.31e-88 274
MS.gene025057.t1 MTR_5g033680 38.043 368 219 7 68 428 64 429 1.71e-86 272
MS.gene025057.t1 MTR_1g086390 41.144 367 191 9 59 408 77 435 2.74e-86 271
MS.gene025057.t1 MTR_3g084360 39.837 369 203 7 59 419 20 377 1.72e-85 266
MS.gene025057.t1 MTR_8g065010 38.624 378 195 7 59 405 103 474 3.20e-84 267
MS.gene025057.t1 MTR_4g084050 37.867 375 205 8 60 419 20 381 6.06e-83 260
MS.gene025057.t1 MTR_5g043350 40.278 360 197 8 68 419 34 383 4.21e-82 258
MS.gene025057.t1 MTR_3g084380 39.496 357 195 7 68 415 26 370 5.49e-81 255
MS.gene025057.t1 MTR_7g113910 49.042 261 112 3 155 415 95 334 2.86e-80 253
MS.gene025057.t1 MTR_3g054320 38.056 360 196 10 68 417 35 377 6.45e-80 253
MS.gene025057.t1 MTR_6g005630 41.108 343 166 10 65 404 47 356 3.54e-79 251
MS.gene025057.t1 MTR_5g034090 38.005 371 194 8 65 405 123 487 3.59e-79 254
MS.gene025057.t1 MTR_2g103650 39.942 343 198 5 65 401 30 370 1.11e-78 249
MS.gene025057.t1 MTR_6g028080 38.462 364 204 8 64 418 31 383 4.34e-78 248
MS.gene025057.t1 MTR_4g120320 37.717 403 229 14 40 432 32 422 7.25e-78 248
MS.gene025057.t1 MTR_3g438050 41.209 364 192 12 57 408 17 370 1.71e-76 243
MS.gene025057.t1 MTR_2g435640 36.154 390 224 12 51 428 43 419 2.34e-76 244
MS.gene025057.t1 MTR_2g032710 39.669 363 204 7 57 408 61 419 1.17e-75 243
MS.gene025057.t1 MTR_8g010080 39.353 371 199 9 59 423 27 377 2.85e-74 238
MS.gene025057.t1 MTR_4g083660 40.000 355 198 10 55 403 1 346 2.96e-74 237
MS.gene025057.t1 MTR_8g030930 39.718 355 197 9 62 407 26 372 5.40e-74 237
MS.gene025057.t1 MTR_8g010070 38.281 384 206 10 47 423 20 379 9.17e-74 236
MS.gene025057.t1 MTR_2g103410 45.627 263 136 5 62 320 58 317 5.04e-73 233
MS.gene025057.t1 MTR_8g010110 38.587 368 201 9 65 426 33 381 8.52e-73 234
MS.gene025057.t1 MTR_8g010090 38.315 368 202 9 65 426 33 381 5.72e-72 231
MS.gene025057.t1 MTR_8g009810 38.968 349 200 8 63 406 35 375 6.07e-72 232
MS.gene025057.t1 MTR_2g058670 35.171 381 236 9 55 430 17 391 7.87e-69 224
MS.gene025057.t1 MTR_2g058840 35.171 381 234 10 55 430 17 389 3.11e-68 223
MS.gene025057.t1 MTR_0157s0060 36.565 361 206 6 67 419 2 347 9.57e-68 220
MS.gene025057.t1 MTR_4g034020 36.565 361 206 6 67 419 2 347 9.57e-68 220
MS.gene025057.t1 MTR_7g035415 40.411 292 154 6 65 349 42 320 3.05e-67 218
MS.gene025057.t1 MTR_8g008765 36.499 337 191 6 59 390 27 345 2.56e-66 216
MS.gene025057.t1 MTR_8g010040 36.769 359 201 9 65 417 34 372 1.17e-64 213
MS.gene025057.t1 MTR_2g029170 37.243 341 199 9 93 429 29 358 1.39e-64 211
MS.gene025057.t1 MTR_2g058640 35.789 380 221 9 62 430 24 391 1.68e-64 213
MS.gene025057.t1 MTR_1g088160 33.418 395 241 11 46 428 18 402 4.18e-64 212
MS.gene025057.t1 MTR_1g012390 34.946 372 225 9 55 419 20 381 4.99e-62 206
MS.gene025057.t1 MTR_1g013740 33.721 344 200 7 63 401 35 355 1.15e-58 197
MS.gene025057.t1 MTR_5g097860 35.185 324 197 8 62 379 24 340 4.00e-58 194
MS.gene025057.t1 MTR_1g013730 34.593 344 197 9 63 401 27 347 9.29e-58 194
MS.gene025057.t1 MTR_8g077320 37.829 304 140 6 62 349 32 302 1.79e-57 193
MS.gene025057.t1 MTR_5g063430 36.213 301 174 8 62 356 24 312 3.41e-57 191
MS.gene025057.t1 MTR_5g034090 37.413 286 145 6 65 320 123 404 5.82e-56 191
MS.gene025057.t1 MTR_8g010050 32.732 388 201 9 43 423 11 345 1.02e-55 188
MS.gene025057.t1 MTR_8g008700 37.891 256 141 3 134 387 26 265 9.98e-53 178
MS.gene025057.t1 MTR_8g031180 38.813 219 124 3 190 403 59 272 6.57e-45 157
MS.gene025057.t1 MTR_2g100040 32.578 353 178 10 56 401 17 316 7.63e-44 157
MS.gene025057.t1 MTR_4g120730 24.874 398 236 11 63 418 40 416 4.61e-22 98.6
MS.gene025057.t1 MTR_2g042740 28.958 259 159 7 157 401 169 416 3.23e-20 93.2
MS.gene025057.t1 MTR_3g449590 25.581 387 230 14 63 410 47 414 9.24e-20 91.7
MS.gene025057.t1 MTR_5g090160 24.869 382 236 13 63 408 44 410 3.63e-18 86.7
MS.gene025057.t1 MTR_7g110710 29.046 241 146 6 157 383 156 385 4.60e-18 86.7
MS.gene025057.t1 MTR_7g110710 29.046 241 146 6 157 383 156 385 5.83e-18 86.3
MS.gene025057.t1 MTR_4g124980 26.255 259 166 7 157 401 187 434 1.06e-17 85.5
MS.gene025057.t1 MTR_1g086030 29.870 231 140 5 157 375 91 311 1.12e-17 85.1
MS.gene025057.t1 MTR_1g086030 26.611 357 195 13 63 375 82 415 1.15e-17 85.5
MS.gene025057.t1 MTR_2g435340 21.813 353 227 7 103 418 8 348 2.50e-17 83.6
MS.gene025057.t1 MTR_7g088550 23.174 397 257 14 43 404 30 413 1.14e-15 79.3
MS.gene025057.t1 MTR_3g096330 25.794 252 163 6 146 383 177 418 1.65e-15 79.3
MS.gene025057.t1 MTR_2g435340 23.636 275 186 4 157 418 150 413 2.40e-15 78.2
MS.gene025057.t1 MTR_8g028725 24.207 347 225 13 63 379 55 393 4.00e-15 77.4
MS.gene025057.t1 MTR_8g098840 23.181 371 244 12 64 403 45 405 4.75e-15 77.4
MS.gene025057.t1 MTR_1g100060 22.222 378 239 11 65 404 95 455 2.14e-13 72.4
MS.gene025057.t1 MTR_7g078680 22.304 408 257 13 64 430 56 444 3.49e-13 71.6
MS.gene025057.t1 MTR_1g100050 23.462 260 177 7 157 404 163 412 4.89e-12 68.2
MS.gene025057.t1 MTR_1g099850 22.911 371 245 14 65 404 57 417 1.05e-11 67.0
MS.gene025057.t1 MTR_7g092470 23.106 264 179 4 136 383 123 378 1.37e-11 66.6
MS.gene025057.t1 MTR_1g100040 22.372 371 247 13 65 404 58 418 1.47e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene025057.t1 AT3G07970 56.359 401 162 8 39 431 44 439 5.84e-149 431
MS.gene025057.t1 AT3G57510 47.955 440 201 12 2 431 10 431 3.08e-136 398
MS.gene025057.t1 AT2G41850 49.543 438 196 12 1 430 10 430 2.89e-125 370
MS.gene025057.t1 AT1G80170 47.606 376 189 6 58 428 48 420 1.40e-117 351
MS.gene025057.t1 AT1G23460 45.119 379 199 7 55 428 33 407 1.40e-108 327
MS.gene025057.t1 AT1G23460 45.119 379 199 7 55 428 57 431 1.92e-108 328
MS.gene025057.t1 AT1G70500 43.536 379 205 7 55 428 57 431 1.17e-104 318
MS.gene025057.t1 AT1G56710 43.417 357 185 7 65 408 50 402 5.94e-92 285
MS.gene025057.t1 AT3G15720 42.703 370 190 8 59 419 20 376 3.72e-91 283
MS.gene025057.t1 AT3G15720 42.703 370 190 8 59 419 19 375 3.77e-91 283
MS.gene025057.t1 AT5G14650 40.710 366 202 7 48 408 36 391 7.52e-90 279
MS.gene025057.t1 AT3G15720 42.432 370 188 9 59 419 19 372 2.60e-88 276
MS.gene025057.t1 AT2G43890 39.788 377 215 8 56 429 22 389 8.69e-88 273
MS.gene025057.t1 AT1G48100 39.782 367 198 8 57 408 74 432 5.38e-87 273
MS.gene025057.t1 AT3G26610 37.113 388 234 7 26 408 31 413 2.53e-85 269
MS.gene025057.t1 AT4G35670 40.833 360 196 7 65 418 26 374 2.81e-85 266
MS.gene025057.t1 AT1G05650 39.628 376 216 7 56 428 21 388 5.59e-84 263
MS.gene025057.t1 AT5G27530 39.385 358 192 5 68 419 58 396 1.20e-83 264
MS.gene025057.t1 AT1G02460 41.576 368 187 9 61 408 87 446 1.32e-83 265
MS.gene025057.t1 AT1G05660 39.257 377 216 8 56 428 21 388 2.18e-82 259
MS.gene025057.t1 AT3G15720 43.034 323 165 6 103 419 3 312 3.53e-82 258
MS.gene025057.t1 AT1G60590 38.378 370 197 7 65 405 125 492 7.68e-82 262
MS.gene025057.t1 AT1G10640 38.147 367 199 7 65 405 121 485 9.60e-81 259
MS.gene025057.t1 AT1G80140 40.881 318 170 7 97 408 6 311 1.31e-80 252
MS.gene025057.t1 AT4G18180 37.831 378 209 8 62 419 38 409 2.44e-78 249
MS.gene025057.t1 AT5G44840 37.500 360 209 7 65 418 26 375 6.27e-78 247
MS.gene025057.t1 AT1G80170 46.816 267 135 5 58 320 48 311 8.32e-78 245
MS.gene025057.t1 AT2G43870 39.948 383 213 12 54 430 12 383 1.11e-77 246
MS.gene025057.t1 AT4G01890 38.827 358 199 8 65 406 67 420 9.97e-77 246
MS.gene025057.t1 AT2G33160 39.362 376 212 9 62 428 31 399 8.02e-76 249
MS.gene025057.t1 AT5G17200 38.660 388 197 9 59 419 35 408 8.82e-76 243
MS.gene025057.t1 AT3G59850 40.643 342 188 10 68 403 28 360 1.35e-75 241
MS.gene025057.t1 AT3G59850 40.290 345 191 10 65 403 69 404 1.97e-75 242
MS.gene025057.t1 AT2G15460 35.884 379 224 9 62 429 30 400 1.72e-74 239
MS.gene025057.t1 AT1G43080 37.368 380 217 11 62 429 30 400 2.79e-74 238
MS.gene025057.t1 AT2G15450 35.714 378 224 9 62 428 30 399 7.01e-74 237
MS.gene025057.t1 AT1G02790 37.598 383 206 11 65 430 54 420 8.43e-74 238
MS.gene025057.t1 AT2G15470 35.620 379 225 9 62 429 30 400 3.00e-73 235
MS.gene025057.t1 AT1G65570 36.070 402 229 12 35 429 14 394 7.51e-73 234
MS.gene025057.t1 AT2G43880 39.377 353 199 8 56 403 24 366 1.06e-72 234
MS.gene025057.t1 AT1G43090 36.800 375 218 9 62 425 30 396 1.46e-72 235
MS.gene025057.t1 AT2G26620 36.340 377 223 9 62 429 30 398 4.82e-72 232
MS.gene025057.t1 AT2G43860 39.276 359 202 10 53 403 20 370 1.38e-71 231
MS.gene025057.t1 AT1G43100 36.533 375 219 9 62 425 30 396 2.50e-71 232
MS.gene025057.t1 AT1G78400 37.366 372 216 11 65 428 37 399 3.83e-71 230
MS.gene025057.t1 AT2G40310 36.340 377 219 11 65 429 33 400 5.94e-71 229
MS.gene025057.t1 AT1G17150 37.466 371 217 9 65 428 35 397 6.89e-71 229
MS.gene025057.t1 AT4G13760 35.092 379 227 9 62 429 30 400 1.31e-70 229
MS.gene025057.t1 AT4G35670 42.238 277 149 2 142 418 2 267 1.41e-70 224
MS.gene025057.t1 AT3G07820 35.694 353 212 8 72 418 30 373 2.91e-69 224
MS.gene025057.t1 AT5G48140 36.752 351 206 8 74 418 33 373 2.92e-69 225
MS.gene025057.t1 AT3G07830 34.807 362 221 8 74 429 33 385 1.72e-68 223
MS.gene025057.t1 AT3G07840 34.771 371 219 9 62 418 13 374 1.89e-68 223
MS.gene025057.t1 AT4G32380 35.817 349 205 7 62 401 25 363 2.50e-67 221
MS.gene025057.t1 AT3G14040 36.997 373 219 9 63 428 71 434 2.61e-67 221
MS.gene025057.t1 AT3G07850 36.675 379 224 9 57 428 64 433 6.49e-67 220
MS.gene025057.t1 AT5G44830 36.196 326 186 4 95 418 11 316 7.57e-67 216
MS.gene025057.t1 AT5G14650 38.489 278 158 5 48 320 36 305 4.66e-61 201
MS.gene025057.t1 AT4G32370 37.217 309 172 7 58 354 29 327 1.14e-60 201
MS.gene025057.t1 AT4G32375 39.464 261 147 3 142 401 13 263 1.16e-58 198
MS.gene025057.t1 AT2G43880 38.835 309 174 8 56 359 24 322 1.18e-58 195
MS.gene025057.t1 AT5G39910 34.754 305 168 7 62 358 35 316 3.36e-52 179
MS.gene025057.t1 AT4G32380 31.700 347 181 7 62 401 25 322 3.74e-52 181
MS.gene025057.t1 AT3G62110 28.879 232 142 5 157 375 156 377 6.94e-21 95.1
MS.gene025057.t1 AT3G62110 28.879 232 142 5 157 375 156 377 6.94e-21 95.1
MS.gene025057.t1 AT1G19170 28.185 259 161 6 157 401 201 448 1.08e-20 94.7
MS.gene025057.t1 AT3G42950 27.005 374 227 14 62 401 65 426 1.95e-20 94.0
MS.gene025057.t1 AT4G23820 24.557 395 240 14 63 418 41 416 4.00e-19 89.7
MS.gene025057.t1 AT4G33440 27.500 280 165 9 146 397 173 442 1.31e-17 85.1
MS.gene025057.t1 AT5G41870 26.235 324 181 14 62 345 44 349 4.25e-17 83.6
MS.gene025057.t1 AT3G16850 23.774 265 170 5 157 404 153 402 1.20e-16 82.0
MS.gene025057.t1 AT2G23900 25.000 308 188 9 65 339 58 355 1.84e-16 81.6
MS.gene025057.t1 AT3G06770 23.360 381 229 12 63 401 44 403 3.35e-16 80.9
MS.gene025057.t1 AT5G49215 23.238 383 231 11 63 403 41 402 3.47e-16 80.9
MS.gene025057.t1 AT3G06770 23.360 381 229 12 63 401 43 402 3.52e-16 80.9
MS.gene025057.t1 AT5G49215 23.238 383 231 11 63 403 43 404 3.59e-16 80.9
MS.gene025057.t1 AT3G48950 24.528 318 177 10 65 339 47 344 5.60e-16 80.1
MS.gene025057.t1 AT4G23500 25.243 309 187 11 64 339 69 366 1.10e-15 79.3
MS.gene025057.t1 AT3G06770 24.031 258 172 5 157 401 69 315 6.44e-15 76.3
MS.gene025057.t1 AT3G06770 24.031 258 172 5 157 401 87 333 6.89e-15 76.3
MS.gene025057.t1 AT3G06770 24.031 258 172 5 157 401 87 333 6.89e-15 76.3
MS.gene025057.t1 AT3G61490 30.208 192 113 6 157 335 173 356 5.87e-14 73.9
MS.gene025057.t1 AT3G61490 30.208 192 113 6 157 335 271 454 7.19e-14 73.9
MS.gene025057.t1 AT3G61490 30.208 192 113 6 157 335 158 341 8.76e-14 73.6
MS.gene025057.t1 AT3G61490 30.208 192 113 6 157 335 158 341 8.76e-14 73.6
MS.gene025057.t1 AT3G61490 30.208 192 113 6 157 335 158 341 8.76e-14 73.6

Find 85 sgRNAs with CRISPR-Local

Find 169 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAACCAAATACTGCCTTTA+TGG 0.149151 4.3:-58071339 MS.gene025057:intron
CAATGTGTTTGTTTCGAATT+TGG 0.170525 4.3:-58070674 MS.gene025057:CDS
GACATAATAAACTGTGATAT+TGG 0.217261 4.3:-58070586 MS.gene025057:CDS
CTCACCATAAAGGCAGTATT+TGG 0.245870 4.3:+58071335 None:intergenic
CACTCGTTCCTCTGATGTTT+TGG 0.255008 4.3:+58069192 None:intergenic
AAAACAAAACATCAACATTT+TGG 0.265438 4.3:-58071685 MS.gene025057:CDS
GTAGTTCCTCCACCACCTTC+TGG 0.295016 4.3:+58069089 None:intergenic
AACTCATCATGTTAGGTCTA+TGG 0.328824 4.3:-58071209 MS.gene025057:intron
ATTTGAGAGTAAAGAATCTA+AGG 0.331559 4.3:-58070741 MS.gene025057:CDS
TTGCAGAGAAATCTACTTGC+AGG 0.332608 4.3:-58069126 MS.gene025057:CDS
GCACGGCTTTGTTCCGCTCT+TGG 0.338883 4.3:+58069234 None:intergenic
GTAGTATTGATCTATGATTA+TGG 0.353266 4.3:+58069277 None:intergenic
GTGAACAGGGCTGCCTTAAC+AGG 0.368388 4.3:-58069882 MS.gene025057:CDS
GTCTCAAATTTCAAAGTTGA+TGG 0.380238 4.3:-58071116 MS.gene025057:CDS
GCTCTTGGCATGGCTCTGTT+TGG 0.383793 4.3:+58069249 None:intergenic
GCGGACCCGGACATGGAATC+AGG 0.384459 4.3:-58070376 MS.gene025057:intron
AAAACTTACAAGGTTATTGT+TGG 0.389616 4.3:+58071037 None:intergenic
TCCATTAGTTGTTCCTGTTA+AGG 0.393409 4.3:+58069869 None:intergenic
ACATAATAAACTGTGATATT+GGG 0.395546 4.3:-58070585 MS.gene025057:CDS
TTTCCAATGTAGTAGTGAAC+AGG 0.405039 4.3:-58069896 MS.gene025057:CDS
CTCCTTTAAGGCATTTAAGA+AGG 0.412653 4.3:-58071453 MS.gene025057:intron
TCGGCTGCAATCAAATTTGA+TGG 0.417694 4.3:+58069157 None:intergenic
AGAGAAAAGTGTATCTCTAT+TGG 0.419321 4.3:+58071648 None:intergenic
ATATGATCACAGGGTGGTTC+AGG 0.430537 4.3:-58069353 MS.gene025057:intron
ATGAAACCTGATTCCATGTC+CGG 0.431003 4.3:+58070370 None:intergenic
GCCTTAACAGGAACAACTAA+TGG 0.431469 4.3:-58069870 MS.gene025057:CDS
TGTCAGCATATGAAGAAGAT+AGG 0.435363 4.3:-58071163 MS.gene025057:CDS
TATTATCTTACAGTTGGTCT+TGG 0.440978 4.3:+58070867 None:intergenic
GATTGTATTTCGATAGTTAG+TGG 0.441436 4.3:-58070431 MS.gene025057:CDS
TTCTGCAGTATTGGAAGCTT+AGG 0.444981 4.3:-58069942 MS.gene025057:intron
TAGTATTGATCTATGATTAT+GGG 0.445220 4.3:+58069278 None:intergenic
TCCTCAATGCTCTCCACAAT+AGG 0.452988 4.3:-58069021 None:intergenic
TGAACAAAGACTCACCATAA+AGG 0.454395 4.3:+58071325 None:intergenic
GATGGTGGTGGCACTTTCAA+TGG 0.457262 4.3:-58071098 MS.gene025057:CDS
CACATGAATTCCATCGGTGT+TGG 0.469737 4.3:+58070627 None:intergenic
GCTTTGTTCCGCTCTTGGCA+TGG 0.478055 4.3:+58069239 None:intergenic
ACATGAATTCCATCGGTGTT+GGG 0.481545 4.3:+58070628 None:intergenic
CAAAACTTGGCTTAATTGCA+CGG 0.481792 4.3:+58069217 None:intergenic
TGCATATGAGTAATGAAGAT+AGG 0.483118 4.3:+58071785 None:intergenic
ACAATATCCATTGCCTATTG+TGG 0.484295 4.3:+58069008 None:intergenic
TGGAATGAAGCATGTTCTAA+AGG 0.492280 4.3:-58071428 MS.gene025057:CDS
AGCCCTGTTCACTACTACAT+TGG 0.494296 4.3:+58069893 None:intergenic
CTCTTCAAAGTCTCAAGGAA+TGG 0.495111 4.3:-58071629 MS.gene025057:CDS
GGAATGAAGCATGTTCTAAA+GGG 0.497809 4.3:-58071427 MS.gene025057:CDS
ATGGTTAGTGTTGATGACTT+TGG 0.500293 4.3:-58071610 MS.gene025057:CDS
AGATGGAAGAGATGATAGAG+AGG 0.500756 4.3:-58071578 MS.gene025057:intron
GACTTTGGAGCAAGAGCAGA+TGG 0.502754 4.3:-58071595 MS.gene025057:CDS
AATTTCAAAGTTGATGGTGG+TGG 0.508006 4.3:-58071110 MS.gene025057:CDS
TCGGTGTTGGGACTATCATC+TGG 0.510329 4.3:+58070640 None:intergenic
TTAAGGCATTTAAGAAGGCA+TGG 0.511868 4.3:-58071448 MS.gene025057:intron
TTTCTCTGCAAGGAACGCTT+CGG 0.512539 4.3:+58069138 None:intergenic
ATAGATATCACTTGCGGACC+CGG 0.513667 4.3:-58070389 MS.gene025057:CDS
TCAACATTGGCTTGATGAAG+TGG 0.522002 4.3:+58071742 None:intergenic
AATGTTAGATATATAAATAG+AGG 0.535007 4.3:-58069053 MS.gene025057:CDS
GTGGCACTTTCAATGGCAAT+GGG 0.535626 4.3:-58071091 MS.gene025057:CDS
ATCACTTGCGGACCCGGACA+TGG 0.542140 4.3:-58070383 MS.gene025057:CDS
GGTGGCACTTTCAATGGCAA+TGG 0.545089 4.3:-58071092 MS.gene025057:CDS
GGTCTTGGTTCATCATTGCA+TGG 0.546282 4.3:+58070882 None:intergenic
ATGCAATGGCTCTTACATAG+TGG 0.549275 4.3:-58071767 MS.gene025057:CDS
ATAAACTGTGATATTGGGAC+AGG 0.552284 4.3:-58070580 MS.gene025057:intron
TCAATCTACCATCATGTACA+TGG 0.568484 4.3:+58071710 None:intergenic
TTCAGCCACATGAATTCCAT+CGG 0.571554 4.3:+58070621 None:intergenic
ATGAAGAAGATAGGCAACAC+TGG 0.573069 4.3:-58071154 MS.gene025057:CDS
TGAAACCTGATTCCATGTCC+GGG 0.576277 4.3:+58070371 None:intergenic
CTAGAACCAGAAGGTGGTGG+AGG 0.582001 4.3:-58069095 MS.gene025057:CDS
GCCTATTGTGGAGAGCATTG+AGG 0.588158 4.3:+58069020 None:intergenic
GAACATAGAAATGCAAAATG+TGG 0.591101 4.3:-58069306 MS.gene025057:CDS
ATTCTAGAACCAGAAGGTGG+TGG 0.593437 4.3:-58069098 MS.gene025057:CDS
AAGGCAGTATTTGGTTGACA+TGG 0.594353 4.3:+58071344 None:intergenic
AATGCTACATGCATTTGTTG+TGG 0.595049 4.3:+58070709 None:intergenic
GATGATAGTCCCAACACCGA+TGG 0.600278 4.3:-58070637 MS.gene025057:CDS
CGTTACTACCATGTACATGA+TGG 0.600317 4.3:-58071718 MS.gene025057:CDS
ATGGTAGTAACGTTCAACAT+TGG 0.605356 4.3:+58071729 None:intergenic
TTCTAAAGGGTCTATCCTTG+TGG 0.605887 4.3:-58071414 MS.gene025057:CDS
TTAGGTCTATGGAACAATTG+AGG 0.617600 4.3:-58071198 MS.gene025057:intron
TGCAAGTAGATTTCTCTGCA+AGG 0.618480 4.3:+58069128 None:intergenic
AAACAGAGCCATGCCAAGAG+CGG 0.620744 4.3:-58069247 MS.gene025057:CDS
TCTTCATTACTCATATGCAA+TGG 0.629492 4.3:-58071781 MS.gene025057:CDS
TCAAATTTCAAAGTTGATGG+TGG 0.632469 4.3:-58071113 MS.gene025057:CDS
TCTATGGAACAATTGAGGCA+TGG 0.649340 4.3:-58071193 MS.gene025057:CDS
CAACACCGATGGAATTCATG+TGG 0.652375 4.3:-58070626 MS.gene025057:CDS
TTCCAATGTAGTAGTGAACA+GGG 0.653388 4.3:-58069895 MS.gene025057:CDS
CGAGCTATAGATATCACTTG+CGG 0.678372 4.3:-58070395 MS.gene025057:CDS
GTGATTCTAGAACCAGAAGG+TGG 0.703740 4.3:-58069101 MS.gene025057:CDS
GATGTGATTCTAGAACCAGA+AGG 0.739033 4.3:-58069104 MS.gene025057:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATACTTGTAAAAATTTA+TGG + chr4.3:58069983-58070002 None:intergenic 10.0%
!! ACATTCAAAAAATAAATATT+TGG - chr4.3:58070294-58070313 MS.gene025057:intron 10.0%
!! AAAATATACAAAAACTTACA+AGG + chr4.3:58069791-58069810 None:intergenic 15.0%
!! AATGGAAAATAAATTTATGT+AGG - chr4.3:58070027-58070046 MS.gene025057:intron 15.0%
!! AATGTTAGATATATAAATAG+AGG - chr4.3:58071762-58071781 MS.gene025057:CDS 15.0%
!! ATATAAAAAAATGTCTTAAC+CGG + chr4.3:58070809-58070828 None:intergenic 15.0%
!! ATTTAGAAGAAATTAATAAG+TGG + chr4.3:58071311-58071330 None:intergenic 15.0%
!! CTAAATAAAAAACATTCAAT+TGG - chr4.3:58070320-58070339 MS.gene025057:intron 15.0%
!!! ATTGATTAAAACTTTTTCTT+TGG - chr4.3:58070534-58070553 MS.gene025057:intron 15.0%
!!! TTTTTTTATATTTCCTTTTC+TGG - chr4.3:58070818-58070837 MS.gene025057:intron 15.0%
!! AAAACTTAAAAGTTGAGATT+GGG - chr4.3:58070571-58070590 MS.gene025057:intron 20.0%
!! AATTTCAACATATATGAACA+AGG - chr4.3:58070641-58070660 MS.gene025057:CDS 20.0%
!! ACATAATAAACTGTGATATT+GGG - chr4.3:58070230-58070249 MS.gene025057:intron 20.0%
!! ATTTCAACATATATGAACAA+GGG - chr4.3:58070642-58070661 MS.gene025057:CDS 20.0%
!! GAGGTAAAAAATAACATATA+TGG - chr4.3:58069256-58069275 MS.gene025057:CDS 20.0%
!! GTTCTATGGTTATTAATTAA+AGG + chr4.3:58071347-58071366 None:intergenic 20.0%
!! TAAAACTTAAAAGTTGAGAT+TGG - chr4.3:58070570-58070589 MS.gene025057:intron 20.0%
!! TAATATATATTCTGCAGTAT+TGG - chr4.3:58070864-58070883 MS.gene025057:intron 20.0%
!!! AAAACAAAACATCAACATTT+TGG - chr4.3:58069130-58069149 MS.gene025057:CDS 20.0%
!!! ATTAAAACTTTTTCTTTGGA+GGG - chr4.3:58070538-58070557 MS.gene025057:intron 20.0%
!!! ATTTTGAAAATTAGTCTGTT+AGG - chr4.3:58071008-58071027 MS.gene025057:intron 20.0%
!!! TAATGAATTGATTTTGAACA+TGG + chr4.3:58069568-58069587 None:intergenic 20.0%
!!! TAGTATTGATCTATGATTAT+GGG + chr4.3:58071540-58071559 None:intergenic 20.0%
!!! TTCATTTAATTTCTCCTTTA+AGG - chr4.3:58069350-58069369 MS.gene025057:intron 20.0%
!!! TTTACTTTCTTTTTTGTTGA+AGG - chr4.3:58070357-58070376 MS.gene025057:intron 20.0%
! AAAACTTACAAGGTTATTGT+TGG + chr4.3:58069781-58069800 None:intergenic 25.0%
! ACATATATGGCAACAAAAAT+TGG - chr4.3:58069269-58069288 MS.gene025057:CDS 25.0%
! ATAACCGATAAAACAAACAT+TGG - chr4.3:58071170-58071189 MS.gene025057:CDS 25.0%
! ATATTGTAATAAAACTCACG+CGG + chr4.3:58071422-58071441 None:intergenic 25.0%
! ATTTGAGAGTAAAGAATCTA+AGG - chr4.3:58070074-58070093 MS.gene025057:intron 25.0%
! CAAGAATATTATCTTACAGT+TGG + chr4.3:58069957-58069976 None:intergenic 25.0%
! CTCTATCTAAGAATTAAATG+AGG + chr4.3:58070489-58070508 None:intergenic 25.0%
! GACATAATAAACTGTGATAT+TGG - chr4.3:58070229-58070248 MS.gene025057:intron 25.0%
! GGAAAATAAATTTATGTAGG+CGG - chr4.3:58070030-58070049 MS.gene025057:intron 25.0%
! TTATGAAAAATACTTGAGAG+AGG - chr4.3:58069852-58069871 MS.gene025057:CDS 25.0%
!! CTAATCGATTCATACTTTAA+TGG - chr4.3:58070009-58070028 MS.gene025057:intron 25.0%
!! TAAGCTATTTGCCAAATTTT+AGG - chr4.3:58071144-58071163 MS.gene025057:CDS 25.0%
!! TTGATTTTGAACATGGTATA+AGG + chr4.3:58069561-58069580 None:intergenic 25.0%
!!! AGTATTTTGGTCAATTTGTA+TGG + chr4.3:58071399-58071418 None:intergenic 25.0%
!!! CTTTCCAATGTTTGTTTTAT+CGG + chr4.3:58071177-58071196 None:intergenic 25.0%
!!! GATTAAAACTTTTTCTTTGG+AGG - chr4.3:58070537-58070556 MS.gene025057:intron 25.0%
!!! GTAGTATTGATCTATGATTA+TGG + chr4.3:58071541-58071560 None:intergenic 25.0%
!!! GTATTTTGGTCAATTTGTAT+GGG + chr4.3:58071398-58071417 None:intergenic 25.0%
ATGGAGTGAGAATAAAAACT+TGG - chr4.3:58070964-58070983 MS.gene025057:intron 30.0%
CAATGTGTTTGTTTCGAATT+TGG - chr4.3:58070141-58070160 MS.gene025057:intron 30.0%
GAACATAGAAATGCAAAATG+TGG - chr4.3:58071509-58071528 MS.gene025057:intron 30.0%
GATTGTATTTCGATAGTTAG+TGG - chr4.3:58070384-58070403 MS.gene025057:CDS 30.0%
GTCTCAAATTTCAAAGTTGA+TGG - chr4.3:58069699-58069718 MS.gene025057:intron 30.0%
TATGATTCCATATGATCACA+GGG - chr4.3:58071453-58071472 MS.gene025057:intron 30.0%
TCTTCATTACTCATATGCAA+TGG - chr4.3:58069034-58069053 MS.gene025057:CDS 30.0%
TGCATATGAGTAATGAAGAT+AGG + chr4.3:58069033-58069052 None:intergenic 30.0%
TTATGATTCCATATGATCAC+AGG - chr4.3:58071452-58071471 MS.gene025057:intron 30.0%
TTCACAAAGTAAAGCTTAGT+GGG - chr4.3:58069509-58069528 MS.gene025057:intron 30.0%
! AGAGAAAAGTGTATCTCTAT+TGG + chr4.3:58069170-58069189 None:intergenic 30.0%
! ATCTATAGCTCGAACATTTT+TGG + chr4.3:58070412-58070431 None:intergenic 30.0%
! ATTTTGAACATGGTATAAGG+AGG + chr4.3:58069558-58069577 None:intergenic 30.0%
! TATTATCTTACAGTTGGTCT+TGG + chr4.3:58069951-58069970 None:intergenic 30.0%
! TTTTCCTAACTCATCATGTT+AGG - chr4.3:58069599-58069618 MS.gene025057:intron 30.0%
! TTTTGAACATGGTATAAGGA+GGG + chr4.3:58069557-58069576 None:intergenic 30.0%
!! AAAAAGTTATTGGCTTGAGA+CGG + chr4.3:58069446-58069465 None:intergenic 30.0%
!! AACATTTTGGTCACATAACT+AGG - chr4.3:58069143-58069162 MS.gene025057:CDS 30.0%
!! TCAAATTTCAAAGTTGATGG+TGG - chr4.3:58069702-58069721 MS.gene025057:intron 30.0%
!!! AGACGGTATATCCTATTTTT+TGG + chr4.3:58069429-58069448 None:intergenic 30.0%
!!! TGATGTTTTGGTACAAAACT+TGG + chr4.3:58071614-58071633 None:intergenic 30.0%
AAAACTTGGCAGGTAAAAGT+TGG - chr4.3:58070978-58070997 MS.gene025057:intron 35.0%
AACTCATCATGTTAGGTCTA+TGG - chr4.3:58069606-58069625 MS.gene025057:intron 35.0%
AAGTGGATAAAACTTGTCAC+AGG + chr4.3:58071294-58071313 None:intergenic 35.0%
AGTGAGAATAAAAACTTGGC+AGG - chr4.3:58070968-58070987 MS.gene025057:intron 35.0%
ATAAACTGTGATATTGGGAC+AGG - chr4.3:58070235-58070254 MS.gene025057:intron 35.0%
ATGGTAGTAACGTTCAACAT+TGG + chr4.3:58069089-58069108 None:intergenic 35.0%
CAAAACTTGGCTTAATTGCA+CGG + chr4.3:58071601-58071620 None:intergenic 35.0%
CATGGACCTGAAAAAGTTAT+TGG + chr4.3:58069456-58069475 None:intergenic 35.0%
CTCTATAAGTAGTCCAGAAA+AGG + chr4.3:58070834-58070853 None:intergenic 35.0%
GTTAGAAGAGCAATGTTCTA+TGG + chr4.3:58071361-58071380 None:intergenic 35.0%
GTTAGGTAGTTTGAACTAGA+CGG + chr4.3:58071267-58071286 None:intergenic 35.0%
GTTCACAAAGTAAAGCTTAG+TGG - chr4.3:58069508-58069527 MS.gene025057:intron 35.0%
TAGACCTAACATGATGAGTT+AGG + chr4.3:58069606-58069625 None:intergenic 35.0%
TCAACCAAATACTGCCTTTA+TGG - chr4.3:58069476-58069495 MS.gene025057:intron 35.0%
TCAATCTACCATCATGTACA+TGG + chr4.3:58069108-58069127 None:intergenic 35.0%
TCAATGGCAATGGGAAAAAA+TGG - chr4.3:58069733-58069752 MS.gene025057:intron 35.0%
TCCATTAGTTGTTCCTGTTA+AGG + chr4.3:58070949-58070968 None:intergenic 35.0%
TCCTTGTGGTACCAAAAAAT+AGG - chr4.3:58069415-58069434 MS.gene025057:intron 35.0%
TCGGTTATGCACCTAAAATT+TGG + chr4.3:58071158-58071177 None:intergenic 35.0%
TGAAAAAAGGACCAACAAAG+TGG + chr4.3:58071235-58071254 None:intergenic 35.0%
TGAACAAAGACTCACCATAA+AGG + chr4.3:58069493-58069512 None:intergenic 35.0%
TGCCTTCTTAAATGCCTTAA+AGG + chr4.3:58069367-58069386 None:intergenic 35.0%
TGGAATGAAGCATGTTCTAA+AGG - chr4.3:58069387-58069406 MS.gene025057:intron 35.0%
TGTCAGCATATGAAGAAGAT+AGG - chr4.3:58069652-58069671 MS.gene025057:intron 35.0%
TTAGGTCTATGGAACAATTG+AGG - chr4.3:58069617-58069636 MS.gene025057:intron 35.0%
TTCCAATGTAGTAGTGAACA+GGG - chr4.3:58070920-58070939 MS.gene025057:intron 35.0%
TTGACAAATCTCCACTTTGT+TGG - chr4.3:58071221-58071240 MS.gene025057:intron 35.0%
TTTCCAATGTAGTAGTGAAC+AGG - chr4.3:58070919-58070938 MS.gene025057:intron 35.0%
TTTCTGGACTACTTATAGAG+AGG - chr4.3:58070834-58070853 MS.gene025057:intron 35.0%
! AATGCTACATGCATTTGTTG+TGG + chr4.3:58070109-58070128 None:intergenic 35.0%
! CTTTTCTCTTCAAAGTCTCA+AGG - chr4.3:58069181-58069200 MS.gene025057:CDS 35.0%
! GGAATGAAGCATGTTCTAAA+GGG - chr4.3:58069388-58069407 MS.gene025057:intron 35.0%
! GTTTTGTACCAAAACATCAG+AGG - chr4.3:58071615-58071634 MS.gene025057:CDS 35.0%
! TTAAGGCATTTAAGAAGGCA+TGG - chr4.3:58069367-58069386 MS.gene025057:intron 35.0%
!! AATTTCAAAGTTGATGGTGG+TGG - chr4.3:58069705-58069724 MS.gene025057:intron 35.0%
!! ACGGTTTGGTCAATGAAAAA+AGG + chr4.3:58071248-58071267 None:intergenic 35.0%
!! ATGGTTAGTGTTGATGACTT+TGG - chr4.3:58069205-58069224 MS.gene025057:CDS 35.0%
!! CTCAAGCCAATAACTTTTTC+AGG - chr4.3:58069447-58069466 MS.gene025057:intron 35.0%
!! CTCCTTTAAGGCATTTAAGA+AGG - chr4.3:58069362-58069381 MS.gene025057:intron 35.0%
!!! TCCTATTTTTTGGTACCACA+AGG + chr4.3:58069419-58069438 None:intergenic 35.0%
AACTTGTCACAGGAGTTGTT+AGG + chr4.3:58071284-58071303 None:intergenic 40.0%
AAGGCAGTATTTGGTTGACA+TGG + chr4.3:58069474-58069493 None:intergenic 40.0%
AGATGGAAGAGATGATAGAG+AGG - chr4.3:58069237-58069256 MS.gene025057:CDS 40.0%
ATGAAACCTGATTCCATGTC+CGG + chr4.3:58070448-58070467 None:intergenic 40.0%
ATGAAGAAGATAGGCAACAC+TGG - chr4.3:58069661-58069680 MS.gene025057:intron 40.0%
ATGCAATGGCTCTTACATAG+TGG - chr4.3:58069048-58069067 MS.gene025057:CDS 40.0%
ATGGCAATGGGAAAAAATGG+TGG - chr4.3:58069736-58069755 MS.gene025057:intron 40.0%
CGAGCTATAGATATCACTTG+CGG - chr4.3:58070420-58070439 MS.gene025057:CDS 40.0%
CGTTACTACCATGTACATGA+TGG - chr4.3:58069097-58069116 MS.gene025057:CDS 40.0%
CTCACCATAAAGGCAGTATT+TGG + chr4.3:58069483-58069502 None:intergenic 40.0%
CTCTTCAAAGTCTCAAGGAA+TGG - chr4.3:58069186-58069205 MS.gene025057:CDS 40.0%
GACGTTAAGGAAGTCAAAAG+AGG - chr4.3:58070686-58070705 MS.gene025057:CDS 40.0%
GCCTTAACAGGAACAACTAA+TGG - chr4.3:58070945-58070964 MS.gene025057:intron 40.0%
GTAGTTTGAACTAGACGGTT+TGG + chr4.3:58071262-58071281 None:intergenic 40.0%
TCGGCTGCAATCAAATTTGA+TGG + chr4.3:58071661-58071680 None:intergenic 40.0%
TCTATGGAACAATTGAGGCA+TGG - chr4.3:58069622-58069641 MS.gene025057:intron 40.0%
TGCAAGTAGATTTCTCTGCA+AGG + chr4.3:58071690-58071709 None:intergenic 40.0%
TTCAGCCACATGAATTCCAT+CGG + chr4.3:58070197-58070216 None:intergenic 40.0%
TTGCAGAGAAATCTACTTGC+AGG - chr4.3:58071689-58071708 MS.gene025057:CDS 40.0%
! ACATGAATTCCATCGGTGTT+GGG + chr4.3:58070190-58070209 None:intergenic 40.0%
! TTCTAAAGGGTCTATCCTTG+TGG - chr4.3:58069401-58069420 MS.gene025057:intron 40.0%
! TTCTGCAGTATTGGAAGCTT+AGG - chr4.3:58070873-58070892 MS.gene025057:intron 40.0%
!! AAAACTCACGCGGAGTATTT+TGG + chr4.3:58071412-58071431 None:intergenic 40.0%
!! GATGTGATTCTAGAACCAGA+AGG - chr4.3:58071711-58071730 MS.gene025057:CDS 40.0%
!! TCAACATTGGCTTGATGAAG+TGG + chr4.3:58069076-58069095 None:intergenic 40.0%
!!! CTTTTGACTTCCTTAACGTC+CGG + chr4.3:58070686-58070705 None:intergenic 40.0%
AGCCCTGTTCACTACTACAT+TGG + chr4.3:58070925-58070944 None:intergenic 45.0%
ATAGATATCACTTGCGGACC+CGG - chr4.3:58070426-58070445 MS.gene025057:CDS 45.0%
ATATGATCACAGGGTGGTTC+AGG - chr4.3:58071462-58071481 MS.gene025057:intron 45.0%
CAACACCGATGGAATTCATG+TGG - chr4.3:58070189-58070208 MS.gene025057:intron 45.0%
CACATGAATTCCATCGGTGT+TGG + chr4.3:58070191-58070210 None:intergenic 45.0%
GATTCCATATGATCACAGGG+TGG - chr4.3:58071456-58071475 MS.gene025057:intron 45.0%
GGCTGTGATCAACAAGAAGA+GGG + chr4.3:58069915-58069934 None:intergenic 45.0%
GGTCTTGGTTCATCATTGCA+TGG + chr4.3:58069936-58069955 None:intergenic 45.0%
GTAATGCTAACCAATGCCTC+CGG - chr4.3:58070664-58070683 MS.gene025057:CDS 45.0%
GTGGCACTTTCAATGGCAAT+GGG - chr4.3:58069724-58069743 MS.gene025057:intron 45.0%
TGAAACCTGATTCCATGTCC+GGG + chr4.3:58070447-58070466 None:intergenic 45.0%
TGAACCACCCTGTGATCATA+TGG + chr4.3:58071463-58071482 None:intergenic 45.0%
TGGCTGTGATCAACAAGAAG+AGG + chr4.3:58069916-58069935 None:intergenic 45.0%
TTTCTCTGCAAGGAACGCTT+CGG + chr4.3:58071680-58071699 None:intergenic 45.0%
! ACTTTTTAACCAGTGCCCAG+AGG - chr4.3:58070781-58070800 MS.gene025057:intron 45.0%
! CACTCGTTCCTCTGATGTTT+TGG + chr4.3:58071626-58071645 None:intergenic 45.0%
!! ATTCTAGAACCAGAAGGTGG+TGG - chr4.3:58071717-58071736 MS.gene025057:CDS 45.0%
!! GTGATTCTAGAACCAGAAGG+TGG - chr4.3:58071714-58071733 MS.gene025057:CDS 45.0%
AAACAGAGCCATGCCAAGAG+CGG - chr4.3:58071568-58071587 MS.gene025057:intron 50.0%
AATGTCTTAACCGGTGCCTC+TGG + chr4.3:58070800-58070819 None:intergenic 50.0%
ATGTCTTAACCGGTGCCTCT+GGG + chr4.3:58070799-58070818 None:intergenic 50.0%
GATGATAGTCCCAACACCGA+TGG - chr4.3:58070178-58070197 MS.gene025057:intron 50.0%
GGTGGCACTTTCAATGGCAA+TGG - chr4.3:58069723-58069742 MS.gene025057:intron 50.0%
TTGACTTCCTTAACGTCCGG+AGG + chr4.3:58070683-58070702 None:intergenic 50.0%
!! GACTTTGGAGCAAGAGCAGA+TGG - chr4.3:58069220-58069239 MS.gene025057:CDS 50.0%
!! GATGGTGGTGGCACTTTCAA+TGG - chr4.3:58069717-58069736 MS.gene025057:intron 50.0%
!! TCGGTGTTGGGACTATCATC+TGG + chr4.3:58070178-58070197 None:intergenic 50.0%
ACCAATGCCTCCGGACGTTA+AGG - chr4.3:58070673-58070692 MS.gene025057:CDS 55.0%
GTAGTTCCTCCACCACCTTC+TGG + chr4.3:58071729-58071748 None:intergenic 55.0%
GTGAACAGGGCTGCCTTAAC+AGG - chr4.3:58070933-58070952 MS.gene025057:intron 55.0%
! CTAGAACCAGAAGGTGGTGG+AGG - chr4.3:58071720-58071739 MS.gene025057:CDS 55.0%
! GCTCTTGGCATGGCTCTGTT+TGG + chr4.3:58071569-58071588 None:intergenic 55.0%
! GCTTTGTTCCGCTCTTGGCA+TGG + chr4.3:58071579-58071598 None:intergenic 55.0%
! TCCTTAACGTCCGGAGGCAT+TGG + chr4.3:58070677-58070696 None:intergenic 55.0%
ATCACTTGCGGACCCGGACA+TGG - chr4.3:58070432-58070451 MS.gene025057:CDS 60.0%
! TAACCAGTGCCCAGAGGCAC+CGG - chr4.3:58070787-58070806 MS.gene025057:intron 60.0%
!! GCACGGCTTTGTTCCGCTCT+TGG + chr4.3:58071584-58071603 None:intergenic 60.0%
GCGGACCCGGACATGGAATC+AGG - chr4.3:58070439-58070458 MS.gene025057:CDS 65.0%
TAACCGGTGCCTCTGGGCAC+TGG + chr4.3:58070793-58070812 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 58069022 58071815 58069022 ID=MS.gene025057
chr4.3 mRNA 58069022 58071815 58069022 ID=MS.gene025057.t1;Parent=MS.gene025057
chr4.3 exon 58071579 58071815 58071579 ID=MS.gene025057.t1.exon1;Parent=MS.gene025057.t1
chr4.3 CDS 58071579 58071815 58071579 ID=cds.MS.gene025057.t1;Parent=MS.gene025057.t1
chr4.3 exon 58071340 58071465 58071340 ID=MS.gene025057.t1.exon2;Parent=MS.gene025057.t1
chr4.3 CDS 58071340 58071465 58071340 ID=cds.MS.gene025057.t1;Parent=MS.gene025057.t1
chr4.3 exon 58071046 58071216 58071046 ID=MS.gene025057.t1.exon3;Parent=MS.gene025057.t1
chr4.3 CDS 58071046 58071216 58071046 ID=cds.MS.gene025057.t1;Parent=MS.gene025057.t1
chr4.3 exon 58070878 58070904 58070878 ID=MS.gene025057.t1.exon4;Parent=MS.gene025057.t1
chr4.3 CDS 58070878 58070904 58070878 ID=cds.MS.gene025057.t1;Parent=MS.gene025057.t1
chr4.3 exon 58070581 58070788 58070581 ID=MS.gene025057.t1.exon5;Parent=MS.gene025057.t1
chr4.3 CDS 58070581 58070788 58070581 ID=cds.MS.gene025057.t1;Parent=MS.gene025057.t1
chr4.3 exon 58070377 58070458 58070377 ID=MS.gene025057.t1.exon6;Parent=MS.gene025057.t1
chr4.3 CDS 58070377 58070458 58070377 ID=cds.MS.gene025057.t1;Parent=MS.gene025057.t1
chr4.3 exon 58069848 58069956 58069848 ID=MS.gene025057.t1.exon7;Parent=MS.gene025057.t1
chr4.3 CDS 58069848 58069956 58069848 ID=cds.MS.gene025057.t1;Parent=MS.gene025057.t1
chr4.3 exon 58069022 58069363 58069022 ID=MS.gene025057.t1.exon8;Parent=MS.gene025057.t1
chr4.3 CDS 58069022 58069363 58069022 ID=cds.MS.gene025057.t1;Parent=MS.gene025057.t1
Gene Sequence

>MS.gene025057

ATGATATTCCTATCTTCATTACTCATATGCAATGGCTCTTACATAGTGGAACCACTTCATCAAGCCAATGTTGAACGTTACTACCATGTACATGATGGTAGATTGATCAAAACAAAACATCAACATTTTGGTCACATAACTAGGACCAATAGAGATACACTTTTCTCTTCAAAGTCTCAAGGAATGGTTAGTGTTGATGACTTTGGAGCAAGAGCAGATGGAAGAGATGATAGAGAGGTAAAAAATAACATATATGGCAACAAAAATTGGAAAATTTATTATGTTAATTCACTAACAACAATATTCTCTAACTTTCTCACTTTTTCATTTCATTTAATTTCTCCTTTAAGGCATTTAAGAAGGCATGGAATGAAGCATGTTCTAAAGGGTCTATCCTTGTGGTACCAAAAAATAGGATATACCGTCTCAAGCCAATAACTTTTTCAGGTCCATGTCAACCAAATACTGCCTTTATGGTGAGTCTTTGTTCACAAAGTAAAGCTTAGTGGGACACTCAATTAGATAGTTTTTTCCCTCCTTATACCATGTTCAAAATCAATTCATTATAATTGTTTTATTTTCCTAACTCATCATGTTAGGTCTATGGAACAATTGAGGCATGGTCTCAAATGTCAGCATATGAAGAAGATAGGCAACACTGGATTGTGTTTGATAGTGTCTCAAATTTCAAAGTTGATGGTGGTGGCACTTTCAATGGCAATGGGAAAAAATGGTGGCAAAACTCATGCAAATATTCCAACAATAACCTTGTAAGTTTTTGTATATTTTTTCTTCAAATTTTGATTTATTATATTTTCTTTTAAGCTAAATTATGAAAAATACTTGAGAGAGGAAAAGAATGATTTCAAATTTTGACTTTAATTTATTTTCCCTCTTCTTGTTGATCACAGCCATGCAATGATGAACCAAGACCAACTGTAAGATAATATTCTTGAAACCATAAATTTTTACAAGTATATTTATTTTCTAATCGATTCATACTTTAATGGAAAATAAATTTATGTAGGCGGTGACATTCTATGATTGCAAAAATTTGAGAGTAAAGAATCTAAGGTTCAAAGATCCACAACAAATGCATGTAGCATTTGAGAGATGCTTCAATGTGTTTGTTTCGAATTTGGTTGTGAGAGCGCCAGATGATAGTCCCAACACCGATGGAATTCATGTGGCTGAAACACAAAATATTGACATAATAAACTGTGATATTGGGACAGGTATGTATAAAAAAAGAGAAAATATTTCAAATAAAAAACATTCAAAAAATAAATATTTGGTTGCTAAATAAAAAACATTCAATTGGATTTTAATTTTTATTTTACTTTCTTTTTTGTTGAAGGTGATGATTGTATTTCGATAGTTAGTGGATCCAAAAATGTTCGAGCTATAGATATCACTTGCGGACCCGGACATGGAATCAGGTTTCATTGTTTATATTATATTAATCCTCATTTAATTCTTAGATAGAGTTTTGTTTTGATCAATTTTTAAGAGATTGATTAAAACTTTTTCTTTGGAGGGAAGATTGATTAAAACTTAAAAGTTGAGATTGGGATAAGATTCTAGTCACTATAGATCTCAGAAATTAAGATGCAATAGATAATTTCAACATATATGAACAAGGGTAATGCTAACCAATGCCTCCGGACGTTAAGGAAGTCAAAAGAGGAAATTTAAAATAAAAAATGATATATTTAAAGTATTAATTACATAATTTTAAATGCAAATATTATTATATTTGACTTTTTAACCAGTGCCCAGAGGCACCGGTTAAGACATTTTTTTATATTTCCTTTTCTGGACTACTTATAGAGAGGTACTCATTAATATATATTCTGCAGTATTGGAAGCTTAGGAGCTGATAACTCAGAAGCTGAAGTTTCCAATGTAGTAGTGAACAGGGCTGCCTTAACAGGAACAACTAATGGAGTGAGAATAAAAACTTGGCAGGTAAAAGTTGGTCTTAAGATTTTGAAAATTAGTCTGTTAGGCACTCTAAAACTAACTTTGTGAGATGAAAGAATGAACTAATTAATAGAAGTCAAAAAATAAACTTTCATAAAGTAGAATTTCATCTAATCATGTAAATCTTGTTGACTTTCTATAAGCTATTTGCCAAATTTTAGGTGCATAACCGATAAAACAAACATTGGAAAGTTGATGAAATTAGTGCAAACAACTTTGACAAATCTCCACTTTGTTGGTCCTTTTTTCATTGACCAAACCGTCTAGTTCAAACTACCTAACAACTCCTGTGACAAGTTTTATCCACTTATTAATTTCTTCTAAATGTCTCAATGACGACCTTTAATTAATAACCATAGAACATTGCTCTTCTAACAAAAAACGCTCACTCCCATACAAATTGACCAAAATACTCCGCGTGAGTTTTATTACAATATATATCTTATATTATGATTCCATATGATCACAGGGTGGTTCAGGATATGCAAGAAACATCAAATTTATGAACATAGAAATGCAAAATGTGGCAAATCCCATAATCATAGATCAATACTACTGCGACCAAACAGAGCCATGCCAAGAGCGGAACAAAGCCGTGCAATTAAGCCAAGTTTTGTACCAAAACATCAGAGGAACGAGTGCTTCAGAAGTAGCCATCAAATTTGATTGCAGCCGAAGCGTTCCTTGCAGAGAAATCTACTTGCAGGATGTGATTCTAGAACCAGAAGGTGGTGGAGGAACTACTGCAACATGTGAGAATGTTAGATATATAAATAGAGGAAAGTTTTATCCTCAATGCTCTCCACAATAG
Protein sequence

>MS.gene025057.t1

MIFLSSLLICNGSYIVEPLHQANVERYYHVHDGRLIKTKHQHFGHITRTNRDTLFSSKSQGMVSVDDFGARADGRDDREAFKKAWNEACSKGSILVVPKNRIYRLKPITFSGPCQPNTAFMVYGTIEAWSQMSAYEEDRQHWIVFDSVSNFKVDGGGTFNGNGKKWWQNSCKYSNNNLPCNDEPRPTAVTFYDCKNLRVKNLRFKDPQQMHVAFERCFNVFVSNLVVRAPDDSPNTDGIHVAETQNIDIINCDIGTGDDCISIVSGSKNVRAIDITCGPGHGISIGSLGADNSEAEVSNVVVNRAALTGTTNGVRIKTWQGGSGYARNIKFMNIEMQNVANPIIIDQYYCDQTEPCQERNKAVQLSQVLYQNIRGTSASEVAIKFDCSRSVPCREIYLQDVILEPEGGGGTTATCENVRYINRGKFYPQCSPQ