AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene014135

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene014135.t1 MTR_7g091850 94.889 450 22 1 1 449 1 450 0.0 828
MS.gene014135.t1 MTR_7g091840 77.083 384 76 3 1 382 1 374 0.0 575
MS.gene014135.t1 MTR_1g052315 65.138 436 142 7 13 443 1 431 0.0 555
MS.gene014135.t1 MTR_2g060350 48.786 453 215 7 1 445 1 444 2.52e-141 412
MS.gene014135.t1 MTR_3g030540 49.663 445 206 5 5 443 4 436 8.10e-135 395
MS.gene014135.t1 MTR_2g103410 48.238 369 188 3 74 440 58 425 7.09e-118 352
MS.gene014135.t1 MTR_8g065030 45.924 368 196 3 74 440 64 429 1.15e-116 350
MS.gene014135.t1 MTR_6g005630 44.536 366 185 6 60 415 21 378 1.44e-99 305
MS.gene014135.t1 MTR_4g094715 43.575 358 189 6 74 421 64 418 2.53e-93 290
MS.gene014135.t1 MTR_2g435640 41.067 375 208 8 73 440 51 419 3.03e-91 283
MS.gene014135.t1 MTR_1g086390 40.833 360 198 6 74 421 80 436 2.15e-89 280
MS.gene014135.t1 MTR_4g083660 43.122 378 205 9 67 441 1 371 1.37e-86 270
MS.gene014135.t1 MTR_5g034090 40.108 369 191 5 74 415 120 485 1.53e-86 274
MS.gene014135.t1 MTR_7g110050 40.111 359 201 6 74 421 66 421 7.68e-86 270
MS.gene014135.t1 MTR_6g005630 41.530 366 173 8 60 415 21 355 8.78e-85 266
MS.gene014135.t1 MTR_7g113910 40.909 374 144 5 69 440 51 349 3.48e-84 263
MS.gene014135.t1 MTR_2g103650 41.329 346 195 6 76 415 29 372 5.45e-83 261
MS.gene014135.t1 MTR_2g103410 49.035 259 130 2 74 330 58 316 1.23e-82 258
MS.gene014135.t1 MTR_4g084050 39.837 369 202 6 76 433 24 383 2.58e-82 259
MS.gene014135.t1 MTR_2g049400 40.541 370 208 7 75 441 28 388 4.00e-82 258
MS.gene014135.t1 MTR_2g032710 41.620 358 196 5 74 421 66 420 1.65e-81 259
MS.gene014135.t1 MTR_3g054320 40.526 380 200 8 76 445 31 394 2.29e-80 254
MS.gene014135.t1 MTR_8g065010 37.736 371 194 5 76 415 108 472 2.69e-80 258
MS.gene014135.t1 MTR_5g033680 39.595 346 200 4 76 415 60 402 2.91e-80 256
MS.gene014135.t1 MTR_8g030930 41.880 351 189 8 73 415 25 368 1.00e-79 253
MS.gene014135.t1 MTR_1g088160 37.084 391 223 10 66 440 19 402 1.55e-79 252
MS.gene014135.t1 MTR_3g438050 40.369 379 211 10 69 440 21 391 1.77e-79 252
MS.gene014135.t1 MTR_8g010080 41.436 362 190 8 74 431 30 373 4.72e-78 248
MS.gene014135.t1 MTR_5g043350 39.362 376 214 5 62 431 16 383 9.70e-78 247
MS.gene014135.t1 MTR_1g012390 40.496 363 199 9 76 431 29 381 1.86e-77 246
MS.gene014135.t1 MTR_4g120320 39.362 376 213 10 73 440 50 418 2.05e-77 247
MS.gene014135.t1 MTR_3g084360 39.237 367 208 6 73 433 22 379 2.26e-77 246
MS.gene014135.t1 MTR_8g010070 41.209 364 190 11 74 431 30 375 2.34e-77 246
MS.gene014135.t1 MTR_3g084380 39.840 374 204 8 65 427 7 370 6.41e-77 245
MS.gene014135.t1 MTR_6g028080 39.891 366 196 8 76 430 31 383 7.34e-77 245
MS.gene014135.t1 MTR_8g010090 39.669 363 196 10 74 431 30 374 4.71e-75 240
MS.gene014135.t1 MTR_8g010110 40.055 362 196 9 74 431 30 374 1.34e-74 239
MS.gene014135.t1 MTR_0157s0060 39.665 358 199 5 79 431 2 347 5.62e-74 236
MS.gene014135.t1 MTR_4g034020 39.665 358 199 5 79 431 2 347 5.62e-74 236
MS.gene014135.t1 MTR_7g035415 42.208 308 161 6 62 363 27 323 5.28e-73 233
MS.gene014135.t1 MTR_8g009810 39.084 371 216 9 73 440 33 396 1.89e-72 234
MS.gene014135.t1 MTR_8g008765 40.122 329 178 5 74 399 30 342 6.89e-71 228
MS.gene014135.t1 MTR_2g058640 36.772 378 224 9 74 444 24 393 1.32e-70 229
MS.gene014135.t1 MTR_8g010040 38.814 371 203 9 76 441 33 384 5.57e-70 227
MS.gene014135.t1 MTR_5g034090 41.197 284 140 3 74 330 120 403 6.51e-67 220
MS.gene014135.t1 MTR_2g029170 40.606 330 182 10 117 441 38 358 1.33e-66 217
MS.gene014135.t1 MTR_1g013740 35.040 371 216 8 75 441 35 384 2.74e-66 217
MS.gene014135.t1 MTR_5g097860 37.267 322 193 6 74 391 24 340 3.17e-65 213
MS.gene014135.t1 MTR_1g013730 36.288 361 205 8 75 431 27 366 1.38e-64 213
MS.gene014135.t1 MTR_2g058840 33.333 381 231 9 74 444 24 391 1.40e-64 214
MS.gene014135.t1 MTR_2g058670 33.158 380 235 8 74 444 24 393 4.64e-64 213
MS.gene014135.t1 MTR_5g063430 37.124 299 173 7 68 361 18 306 3.34e-60 199
MS.gene014135.t1 MTR_8g010050 35.616 365 175 10 74 431 30 341 1.74e-59 199
MS.gene014135.t1 MTR_8g077320 35.938 384 175 10 74 441 32 360 2.26e-58 196
MS.gene014135.t1 MTR_8g008700 40.221 271 144 4 134 402 14 268 2.48e-54 183
MS.gene014135.t1 MTR_8g031180 45.078 193 98 2 217 403 73 263 5.82e-48 166
MS.gene014135.t1 MTR_2g100040 29.787 329 174 8 91 413 39 316 2.62e-40 148
MS.gene014135.t1 MTR_4g124980 24.409 381 228 14 74 413 73 434 1.88e-19 90.9
MS.gene014135.t1 MTR_2g435340 25.183 409 242 14 75 441 37 423 3.39e-18 87.0
MS.gene014135.t1 MTR_5g090160 24.771 327 193 13 75 363 44 355 2.09e-17 84.7
MS.gene014135.t1 MTR_4g120730 23.604 394 246 12 75 430 40 416 4.27e-16 80.5
MS.gene014135.t1 MTR_7g078680 23.956 455 256 18 46 443 24 445 7.01e-16 80.1
MS.gene014135.t1 MTR_2g435340 24.384 365 224 11 116 441 7 358 7.63e-16 79.3
MS.gene014135.t1 MTR_3g096330 25.000 336 165 12 74 354 75 378 2.13e-15 79.3
MS.gene014135.t1 MTR_1g100050 25.067 375 230 14 77 415 52 411 2.81e-15 78.2
MS.gene014135.t1 MTR_8g098840 23.733 375 237 14 76 415 45 405 1.05e-14 76.3
MS.gene014135.t1 MTR_1g086030 26.934 349 205 13 75 385 82 418 2.08e-14 75.5
MS.gene014135.t1 MTR_1g100040 25.698 358 215 13 77 398 58 400 2.42e-14 75.5
MS.gene014135.t1 MTR_7g110710 26.355 406 228 20 75 424 43 433 3.59e-14 74.7
MS.gene014135.t1 MTR_7g110710 26.355 406 228 20 75 424 43 433 3.93e-14 74.7
MS.gene014135.t1 MTR_8g028725 23.558 416 241 14 75 441 55 442 3.93e-14 74.7
MS.gene014135.t1 MTR_1g100060 24.267 375 233 12 77 415 95 454 5.42e-14 74.3
MS.gene014135.t1 MTR_7g088550 23.885 381 235 15 47 391 28 389 7.22e-14 73.9
MS.gene014135.t1 MTR_3g449590 24.590 305 192 11 75 349 47 343 5.53e-13 70.9
MS.gene014135.t1 MTR_1g086030 29.798 198 120 4 165 350 85 275 8.73e-13 70.1
MS.gene014135.t1 MTR_1g099850 24.490 392 234 15 65 415 46 416 8.64e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene014135.t1 AT3G07970 51.339 448 198 10 1 442 5 438 1.22e-145 423
MS.gene014135.t1 AT3G57510 48.879 446 208 8 1 442 1 430 1.57e-141 412
MS.gene014135.t1 AT2G41850 57.143 378 151 5 70 444 63 432 1.04e-138 405
MS.gene014135.t1 AT1G80170 46.524 374 196 4 70 440 48 420 1.47e-116 349
MS.gene014135.t1 AT1G70500 41.704 446 243 7 3 443 1 434 1.90e-115 347
MS.gene014135.t1 AT1G23460 46.739 368 193 3 74 440 42 407 2.90e-114 343
MS.gene014135.t1 AT1G23460 46.739 368 193 3 74 440 66 431 4.74e-114 343
MS.gene014135.t1 AT5G14650 43.567 342 186 5 75 415 51 386 1.01e-91 285
MS.gene014135.t1 AT1G56710 41.944 360 194 6 74 421 47 403 1.48e-90 281
MS.gene014135.t1 AT1G02460 42.424 363 191 7 74 421 88 447 9.18e-90 281
MS.gene014135.t1 AT1G10640 41.622 370 186 5 73 415 117 483 1.15e-89 282
MS.gene014135.t1 AT1G60590 40.270 370 188 5 76 415 124 490 4.97e-88 278
MS.gene014135.t1 AT4G18180 38.693 398 217 11 67 443 31 422 7.63e-86 269
MS.gene014135.t1 AT1G48100 40.223 358 201 5 74 421 79 433 1.38e-85 270
MS.gene014135.t1 AT1G80170 47.909 263 135 2 70 330 48 310 1.77e-85 265
MS.gene014135.t1 AT2G43890 40.108 369 209 8 76 441 30 389 1.88e-85 267
MS.gene014135.t1 AT4G01890 40.650 369 195 9 63 416 59 418 2.16e-85 270
MS.gene014135.t1 AT3G15720 40.599 367 202 6 75 435 23 379 2.72e-85 269
MS.gene014135.t1 AT3G15720 40.599 367 202 6 75 435 24 380 2.96e-85 269
MS.gene014135.t1 AT1G05660 39.623 371 211 8 74 440 27 388 2.94e-84 264
MS.gene014135.t1 AT3G26610 42.391 368 196 6 74 429 66 429 4.90e-84 266
MS.gene014135.t1 AT1G05650 39.153 378 217 8 67 440 20 388 5.54e-84 263
MS.gene014135.t1 AT2G43860 42.400 375 198 10 60 429 22 383 3.29e-83 262
MS.gene014135.t1 AT2G33160 40.800 375 210 8 73 440 30 399 3.66e-83 269
MS.gene014135.t1 AT2G43880 38.727 377 219 8 68 441 24 391 7.30e-83 260
MS.gene014135.t1 AT5G44840 38.950 362 209 5 73 430 22 375 9.53e-83 260
MS.gene014135.t1 AT1G78400 38.606 373 218 7 73 440 33 399 2.92e-82 259
MS.gene014135.t1 AT3G15720 39.782 367 202 6 75 435 23 376 4.43e-82 260
MS.gene014135.t1 AT5G27530 41.322 363 192 5 73 431 51 396 1.05e-81 259
MS.gene014135.t1 AT4G35670 41.783 359 196 5 76 430 25 374 2.17e-81 257
MS.gene014135.t1 AT1G17150 40.310 387 214 11 68 444 23 402 4.03e-81 256
MS.gene014135.t1 AT2G43870 38.845 381 218 10 67 442 13 383 9.95e-81 254
MS.gene014135.t1 AT5G17200 38.903 383 201 6 74 433 38 410 1.20e-80 256
MS.gene014135.t1 AT3G59850 40.270 370 207 10 76 440 24 384 1.74e-79 251
MS.gene014135.t1 AT3G59850 40.270 370 207 10 76 440 68 428 4.23e-79 252
MS.gene014135.t1 AT1G02790 38.120 383 210 11 74 442 51 420 4.78e-77 246
MS.gene014135.t1 AT1G43080 37.632 380 218 10 73 441 29 400 4.19e-76 243
MS.gene014135.t1 AT2G15460 37.532 389 221 11 67 441 20 400 4.17e-75 241
MS.gene014135.t1 AT1G43090 37.600 375 215 10 73 436 29 395 4.34e-75 242
MS.gene014135.t1 AT4G32380 38.150 346 201 6 74 413 25 363 9.29e-75 241
MS.gene014135.t1 AT4G13760 37.105 380 220 10 73 441 29 400 1.46e-74 239
MS.gene014135.t1 AT1G43100 37.333 375 216 10 73 436 29 395 4.53e-74 239
MS.gene014135.t1 AT2G15450 38.547 358 202 9 67 413 20 370 1.90e-73 236
MS.gene014135.t1 AT3G07840 35.171 381 229 7 76 448 22 392 1.93e-72 234
MS.gene014135.t1 AT2G40310 36.412 379 224 9 73 441 29 400 2.65e-72 233
MS.gene014135.t1 AT2G15470 37.989 358 204 9 67 413 20 370 9.42e-72 232
MS.gene014135.t1 AT1G65570 38.978 372 212 11 75 440 31 393 1.66e-71 231
MS.gene014135.t1 AT3G15720 39.815 324 180 5 117 435 3 316 1.75e-71 231
MS.gene014135.t1 AT3G07830 36.538 364 216 9 88 444 34 389 6.86e-70 227
MS.gene014135.t1 AT3G14040 38.070 373 215 10 75 440 71 434 8.83e-70 228
MS.gene014135.t1 AT5G44830 38.024 334 185 5 101 430 1 316 1.60e-69 224
MS.gene014135.t1 AT1G80140 37.798 336 194 7 111 440 6 332 5.25e-69 223
MS.gene014135.t1 AT2G43880 38.535 314 183 6 68 378 24 330 6.01e-69 223
MS.gene014135.t1 AT2G26620 36.693 387 225 11 67 441 20 398 6.97e-69 224
MS.gene014135.t1 AT3G07850 37.802 373 216 10 75 440 70 433 1.14e-68 225
MS.gene014135.t1 AT5G48140 35.602 382 225 8 76 448 22 391 1.38e-68 224
MS.gene014135.t1 AT3G07820 35.933 359 218 7 88 441 33 384 5.00e-68 222
MS.gene014135.t1 AT5G14650 43.191 257 142 3 75 330 51 304 1.08e-67 219
MS.gene014135.t1 AT4G32370 41.311 305 160 9 73 366 32 328 2.93e-65 213
MS.gene014135.t1 AT4G32375 41.473 258 144 1 156 413 13 263 1.15e-61 206
MS.gene014135.t1 AT4G35670 42.182 275 150 2 156 430 2 267 3.86e-61 201
MS.gene014135.t1 AT4G32380 34.203 345 175 6 74 413 25 322 1.20e-60 203
MS.gene014135.t1 AT5G39910 36.513 304 166 6 74 371 35 317 2.11e-58 196
MS.gene014135.t1 AT1G19170 23.671 414 247 16 74 441 86 476 1.43e-19 91.7
MS.gene014135.t1 AT3G42950 24.020 408 250 15 74 440 65 453 8.05e-18 86.3
MS.gene014135.t1 AT5G49215 27.179 390 224 14 75 423 41 411 8.23e-18 85.9
MS.gene014135.t1 AT5G49215 27.179 390 224 14 75 423 43 413 8.47e-18 85.9
MS.gene014135.t1 AT3G06770 26.110 383 216 12 75 413 43 402 2.42e-17 84.3
MS.gene014135.t1 AT3G06770 26.110 383 216 12 75 413 44 403 2.69e-17 84.3
MS.gene014135.t1 AT4G23820 27.063 303 185 9 75 348 41 336 4.53e-17 83.6
MS.gene014135.t1 AT3G62110 27.053 414 241 21 75 446 43 437 7.49e-17 83.2
MS.gene014135.t1 AT3G62110 27.053 414 241 21 75 446 43 437 7.49e-17 83.2
MS.gene014135.t1 AT4G33440 23.645 406 210 14 74 408 71 447 2.24e-16 81.6
MS.gene014135.t1 AT2G23900 24.752 404 248 17 77 441 58 444 5.31e-14 74.3
MS.gene014135.t1 AT5G41870 25.155 322 202 11 73 363 43 356 8.34e-14 73.6
MS.gene014135.t1 AT4G23500 24.265 408 246 18 76 441 69 455 3.64e-13 71.6
MS.gene014135.t1 AT3G06770 26.199 271 169 7 161 413 58 315 8.33e-13 70.1
MS.gene014135.t1 AT3G61490 23.250 400 260 14 76 441 61 447 8.77e-13 70.5
MS.gene014135.t1 AT3G61490 23.250 400 260 14 76 441 46 432 9.84e-13 70.5
MS.gene014135.t1 AT3G61490 23.250 400 260 14 76 441 46 432 9.84e-13 70.5
MS.gene014135.t1 AT3G61490 23.250 400 260 14 76 441 46 432 9.84e-13 70.5
MS.gene014135.t1 AT3G06770 26.199 271 169 7 161 413 76 333 1.15e-12 69.7
MS.gene014135.t1 AT3G06770 26.199 271 169 7 161 413 76 333 1.15e-12 69.7
MS.gene014135.t1 AT3G61490 23.383 402 257 15 76 441 159 545 1.25e-12 70.5

Find 92 sgRNAs with CRISPR-Local

Find 187 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTACAACACATTGCTAATT+TGG 0.092906 7.4:-17125988 None:intergenic
GTGAATGGAGCTAAGATTTC+TGG 0.145479 7.4:+17124804 MS.gene014135:CDS
GTAATTCTGATTAATTATTA+TGG 0.180204 7.4:-17125806 None:intergenic
TCGATTAATGTTAAAGCTTC+TGG 0.232871 7.4:+17124296 MS.gene014135:CDS
TGGGAAGTAGTATGTGATTC+AGG 0.267912 7.4:+17123453 MS.gene014135:CDS
GTTCAGCAACTATTAGTTAA+TGG 0.294863 7.4:+17123769 MS.gene014135:CDS
AAATCCAAGGACATCGTTTC+GGG 0.299515 7.4:+17124774 MS.gene014135:CDS
TAATTCTGATTAATTATTAT+GGG 0.319605 7.4:-17125805 None:intergenic
AAATTTAATTGACAGATATC+TGG 0.320792 7.4:+17123676 MS.gene014135:intron
ATTGTTAATGTCAAAGATTA+TGG 0.321747 7.4:+17123044 MS.gene014135:CDS
GATTAAATGCAGGGAGGTTC+AGG 0.322241 7.4:+17125730 MS.gene014135:intron
TCACAGAAATATACAAATTA+AGG 0.339722 7.4:+17126193 MS.gene014135:CDS
ATATGAATTCCATCGGTGTT+AGG 0.340746 7.4:-17124347 None:intergenic
ACAAATTCACGTTTCATTCC+AGG 0.368923 7.4:+17124271 MS.gene014135:CDS
ATGAGAGGAGGAATTGTCTT+AGG 0.383327 7.4:-17122833 None:intergenic
TATCTCAGTATTGGAAGCTT+GGG 0.384966 7.4:+17124744 MS.gene014135:intron
CAAATTTCAGAACATTGAAA+TGG 0.394222 7.4:+17125768 MS.gene014135:CDS
AAGATTTCTGGAACTACAAA+TGG 0.398447 7.4:+17124816 MS.gene014135:CDS
GTGGACCAGGCCATGGCATC+AGG 0.404513 7.4:+17124619 MS.gene014135:CDS
GTCAAAGATTATGGAGCTAA+AGG 0.414898 7.4:+17123053 MS.gene014135:CDS
AAAATCCAAGGACATCGTTT+CGG 0.414961 7.4:+17124773 MS.gene014135:CDS
CAAGGACCAGAGAATCTGAT+TGG 0.415737 7.4:-17123522 None:intergenic
AAAATCTCTAGCTCTATCAT+AGG 0.416238 7.4:+17124389 MS.gene014135:CDS
TCAAAGATTATGGAGCTAAA+GGG 0.422051 7.4:+17123054 MS.gene014135:CDS
CTGATTAATTATTATGGGGT+TGG 0.424803 7.4:-17125800 None:intergenic
ATATCTCAGTATTGGAAGCT+TGG 0.439364 7.4:+17124743 MS.gene014135:intron
TTCAGGCATTCAAGAAGGCT+TGG 0.439440 7.4:+17123433 MS.gene014135:intron
GGTCTCAATGTGTCATCGCC+AGG 0.441285 7.4:+17124317 MS.gene014135:CDS
CTCAAACCAATCAGATTCTC+TGG 0.441568 7.4:+17123516 MS.gene014135:CDS
GTGTTGTACCAGAATATAAC+AGG 0.441587 7.4:+17126001 MS.gene014135:CDS
TACATTATTATTCAAGAACT+TGG 0.444587 7.4:+17122959 MS.gene014135:CDS
TAATGTATCACCATCATCAT+AGG 0.445190 7.4:-17122943 None:intergenic
GATTGTATATCAATTGTAGA+TGG 0.452714 7.4:+17124564 MS.gene014135:CDS
TCTAGCTCTATCATAGGAAC+TGG 0.455625 7.4:+17124395 MS.gene014135:CDS
CTTTAACATTAATCGAATCC+TGG 0.456787 7.4:-17124289 None:intergenic
TACTCCCGAAACGATGTCCT+TGG 0.473033 7.4:-17124778 None:intergenic
TCAGGCATTCAAGAAGGCTT+GGG 0.482423 7.4:+17123434 MS.gene014135:intron
TTGTTGCATAAAGCCTTAGC+AGG 0.490400 7.4:-17126127 None:intergenic
AACTACCTGATGCCATGGCC+TGG 0.490944 7.4:-17124624 None:intergenic
TGATCTTCACTGTAATCTGA+TGG 0.496203 7.4:-17123721 None:intergenic
TATGAATTCCATCGGTGTTA+GGG 0.496669 7.4:-17124346 None:intergenic
ATACTCTTAATATGTGAAGA+AGG 0.514121 7.4:+17126100 MS.gene014135:CDS
GTTTCGGGAGTATTAGTGAA+TGG 0.514173 7.4:+17124789 MS.gene014135:CDS
GGTGGCAAAACTCATGCAAA+AGG 0.522181 7.4:+17123824 MS.gene014135:CDS
TAATATTCAGGCATTCAAGA+AGG 0.522536 7.4:+17123428 MS.gene014135:intron
AGTAGATAATTATAATCTTG+AGG 0.527229 7.4:-17123495 None:intergenic
GGTGGAACCATCGATGGAAA+AGG 0.528567 7.4:+17123793 MS.gene014135:CDS
CAACTATTAGTTAATGGTGG+TGG 0.535177 7.4:+17123775 MS.gene014135:CDS
CAAATCTAACATATCAGTCC+AGG 0.537341 7.4:+17123545 MS.gene014135:CDS
GGGAAGTAGTATGTGATTCA+GGG 0.539599 7.4:+17123454 MS.gene014135:CDS
TTAATATACCAGTGTATCAT+CGG 0.546606 7.4:-17123087 None:intergenic
CAGTGAGAAATTTCCATGCA+AGG 0.551676 7.4:+17126060 MS.gene014135:CDS
TGATGACGATAGTGAATGAG+AGG 0.555898 7.4:-17122848 None:intergenic
GATTATGGAGCTAAAGGGGA+TGG 0.559266 7.4:+17123059 MS.gene014135:CDS
CAACGTATGTAGTAATAAGC+GGG 0.563528 7.4:-17122908 None:intergenic
AATTCTGATTAATTATTATG+GGG 0.565719 7.4:-17125804 None:intergenic
AGTTAGAATTAAGACTTGGC+CGG 0.569890 7.4:+17124839 MS.gene014135:CDS
ATTTCTGTGAGTTGCAGCGT+GGG 0.569894 7.4:-17126180 None:intergenic
ACTGATATGTTAGATTTGCA+AGG 0.570724 7.4:-17123540 None:intergenic
TCGATGGAAAAGGAAACATA+TGG 0.573459 7.4:+17123803 MS.gene014135:CDS
TCTAACATTTGATAGTTGCA+AGG 0.576561 7.4:+17124211 MS.gene014135:CDS
GATTCACCTTCCTATGATGA+TGG 0.579625 7.4:+17122933 MS.gene014135:CDS
ATCTCAGTATTGGAAGCTTG+GGG 0.581140 7.4:+17124745 MS.gene014135:intron
GCCTTGCAAGGATGCTCCAA+CGG 0.581239 7.4:+17123985 MS.gene014135:intron
CAAAGATTATGGAGCTAAAG+GGG 0.581495 7.4:+17123055 MS.gene014135:CDS
AATGGTGGTGGAACCATCGA+TGG 0.585351 7.4:+17123787 MS.gene014135:CDS
AATGTTCAATTGTCTTACAC+AGG 0.586671 7.4:+17126148 MS.gene014135:CDS
ACCGTTGGAGCATCCTTGCA+AGG 0.589497 7.4:-17123986 None:intergenic
ATTACTTGTGGACCAGGCCA+TGG 0.589996 7.4:+17124612 MS.gene014135:CDS
TGAAGAAGGAGAACCTGCTA+AGG 0.593731 7.4:+17126114 MS.gene014135:CDS
TTGCAATAGCAACTTGCAAG+AGG 0.593871 7.4:+17122884 MS.gene014135:CDS
TGGTCATACCGATGATACAC+TGG 0.597296 7.4:+17123079 MS.gene014135:CDS
AGAGGAGGAATTGTCTTAGG+AGG 0.600709 7.4:-17122830 None:intergenic
ACAGACATTACTTGTGGACC+AGG 0.604491 7.4:+17124606 MS.gene014135:CDS
GTCTCAATGTGTCATCGCCA+GGG 0.606055 7.4:+17124318 MS.gene014135:CDS
TCGGTGTTAGGGCTATTCCC+TGG 0.607624 7.4:-17124335 None:intergenic
CAGCAACTATTAGTTAATGG+TGG 0.608202 7.4:+17123772 MS.gene014135:CDS
AAGTTAACTACCTGATGCCA+TGG 0.609029 7.4:-17124629 None:intergenic
GGGAATAGCCCTAACACCGA+TGG 0.616044 7.4:+17124338 MS.gene014135:CDS
ATGGAGTTAGAATTAAGACT+TGG 0.618304 7.4:+17124835 MS.gene014135:CDS
ATTGGTGATATGAATTCCAT+CGG 0.620342 7.4:-17124354 None:intergenic
GAAGCCACAGACATTACTTG+TGG 0.628882 7.4:+17124600 MS.gene014135:CDS
TGGTCCACAAGTAATGTCTG+TGG 0.628925 7.4:-17124604 None:intergenic
TGACGATAGTGAATGAGAGG+AGG 0.634888 7.4:-17122845 None:intergenic
ACAGTGAAGATCAAAGACAT+TGG 0.636413 7.4:+17123731 MS.gene014135:CDS
TCAACGTATGTAGTAATAAG+CGG 0.641060 7.4:-17122909 None:intergenic
GTATCACCATCATCATAGGA+AGG 0.644782 7.4:-17122939 None:intergenic
TATTTCTGTGAGTTGCAGCG+TGG 0.653112 7.4:-17126181 None:intergenic
TCTCAGTATTGGAAGCTTGG+GGG 0.679058 7.4:+17124746 MS.gene014135:intron
ATGGAAAAGGAAACATATGG+TGG 0.687596 7.4:+17123806 MS.gene014135:CDS
GTTGTTTATGCAGGACTCTG+CGG 0.702531 7.4:+17125964 MS.gene014135:intron
GAGAACGTGAAGTGACACCA+TGG 0.725055 7.4:-17123016 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAATATTTATTTATTTAG+TGG - chr7.4:17125416-17125435 None:intergenic 10.0%
!! ATTAAAAACAAAAAATATCT+TGG - chr7.4:17123159-17123178 None:intergenic 10.0%
!! TAATTCTGATTAATTATTAT+GGG - chr7.4:17125808-17125827 None:intergenic 10.0%
!! AATTCTGATTAATTATTATG+GGG - chr7.4:17125807-17125826 None:intergenic 15.0%
!! CATACAAAATATTAAATTAG+TGG - chr7.4:17123309-17123328 None:intergenic 15.0%
!! GGTTTATATTTAAACAAATA+AGG + chr7.4:17125682-17125701 MS.gene014135:intron 15.0%
!! GTAATTCTGATTAATTATTA+TGG - chr7.4:17125809-17125828 None:intergenic 15.0%
!! TGAAAAAAAATTACAAGATT+AGG + chr7.4:17124447-17124466 MS.gene014135:intron 15.0%
!! TTAAATATAAACCAATGTAT+AGG - chr7.4:17125675-17125694 None:intergenic 15.0%
!! TTATAATTTACTTAAAAGTG+TGG - chr7.4:17123633-17123652 None:intergenic 15.0%
!!! AACTTAAATTTTCCTATAAT+TGG + chr7.4:17123391-17123410 MS.gene014135:intron 15.0%
!!! AATTGACTTGATTAAAATAT+TGG - chr7.4:17123883-17123902 None:intergenic 15.0%
!!! ATTGACTTGATTAAAATATT+GGG - chr7.4:17123882-17123901 None:intergenic 15.0%
!!! GTCAATTAAATTTTTGAAAA+AGG - chr7.4:17123669-17123688 None:intergenic 15.0%
!!! TAATTTACCATTTTTTTACA+TGG - chr7.4:17125850-17125869 None:intergenic 15.0%
!!! TTGTTTTCAATTATAACAAT+GGG + chr7.4:17123186-17123205 MS.gene014135:intron 15.0%
!!! TTTGTTTTCAATTATAACAA+TGG + chr7.4:17123185-17123204 MS.gene014135:intron 15.0%
!! AAAAAAGCCATGTAAAAAAA+TGG + chr7.4:17125840-17125859 MS.gene014135:CDS 20.0%
!! AAATTTAATTGACAGATATC+TGG + chr7.4:17123676-17123695 MS.gene014135:intron 20.0%
!! AATAAGGCATAAATTATCTT+TGG + chr7.4:17125698-17125717 MS.gene014135:intron 20.0%
!! AATATTTAATGTAACTAACC+TGG - chr7.4:17123566-17123585 None:intergenic 20.0%
!! ACAATTATGATTTGAATGTT+CGG + chr7.4:17124102-17124121 MS.gene014135:intron 20.0%
!! AGTAGATAATTATAATCTTG+AGG - chr7.4:17123498-17123517 None:intergenic 20.0%
!! ATAAATGATAGTTTAATCAG+TGG + chr7.4:17125374-17125393 MS.gene014135:intron 20.0%
!! ATTGTTAATGTCAAAGATTA+TGG + chr7.4:17123044-17123063 MS.gene014135:CDS 20.0%
!! CTAAATTGTTGAGAAAATTT+AGG - chr7.4:17124029-17124048 None:intergenic 20.0%
!! CTAATTAGTTAATTAATCAC+TGG - chr7.4:17123592-17123611 None:intergenic 20.0%
!! TAAATGATAGTTTAATCAGT+GGG + chr7.4:17125375-17125394 MS.gene014135:intron 20.0%
!! TAAGAAAACCAAATTAGTAT+AGG - chr7.4:17123332-17123351 None:intergenic 20.0%
!! TACATTATTATTCAAGAACT+TGG + chr7.4:17122959-17122978 MS.gene014135:CDS 20.0%
!! TCTCATAAATTGACAATAAA+TGG - chr7.4:17125345-17125364 None:intergenic 20.0%
!! TGATTTATATATCTCAGTAT+TGG + chr7.4:17124735-17124754 MS.gene014135:intron 20.0%
!!! ATGTAGTTTTAACAAAATCA+CGG + chr7.4:17125202-17125221 MS.gene014135:intron 20.0%
!!! ATTTTTCTCTAATTTGTTTC+AGG + chr7.4:17124537-17124556 MS.gene014135:intron 20.0%
!!! CTAACTAACTTTATTTTTGT+AGG + chr7.4:17124187-17124206 MS.gene014135:intron 20.0%
!!! TCATAATCAAGGATTTTAAT+TGG + chr7.4:17124143-17124162 MS.gene014135:intron 20.0%
!!! TCCTTAAAGTTTAAAATTAC+CGG - chr7.4:17124861-17124880 None:intergenic 20.0%
!!! TTTTAAAATAAGTGCATGTT+TGG + chr7.4:17124969-17124988 MS.gene014135:intron 20.0%
!!! TTTTTCTCTAATTTGTTTCA+GGG + chr7.4:17124538-17124557 MS.gene014135:intron 20.0%
! ATACTCTTAATATGTGAAGA+AGG + chr7.4:17126100-17126119 MS.gene014135:CDS 25.0%
! ATATAAACCAATGTATAGGA+AGG - chr7.4:17125671-17125690 None:intergenic 25.0%
! CAAATTTCAGAACATTGAAA+TGG + chr7.4:17125768-17125787 MS.gene014135:CDS 25.0%
! GATAGATTAGTATATCAAAG+TGG - chr7.4:17124890-17124909 None:intergenic 25.0%
! GATTGTATATCAATTGTAGA+TGG + chr7.4:17124564-17124583 MS.gene014135:CDS 25.0%
! TATAAACCAATGTATAGGAA+GGG - chr7.4:17125670-17125689 None:intergenic 25.0%
! TATTTACTTTGCTTCACTAA+CGG - chr7.4:17125464-17125483 None:intergenic 25.0%
! TGTTACAGATTTCATAATCA+AGG + chr7.4:17124132-17124151 MS.gene014135:intron 25.0%
! TTAATATACCAGTGTATCAT+CGG - chr7.4:17123090-17123109 None:intergenic 25.0%
! TTGATTATGAAATCTGTAAC+AGG - chr7.4:17124133-17124152 None:intergenic 25.0%
! TTGTCAATCATCATATTTAG+TGG - chr7.4:17124915-17124934 None:intergenic 25.0%
! TTTGTATGCCTATACTAATT+TGG + chr7.4:17123321-17123340 MS.gene014135:intron 25.0%
!! AAATTGAAGCTTCATGTTTT+CGG + chr7.4:17125086-17125105 MS.gene014135:intron 25.0%
!! GAGAAAAAGCATAAAAAAGT+TGG - chr7.4:17123955-17123974 None:intergenic 25.0%
!! TTTACGTTAAACAAAAGCAT+TGG - chr7.4:17125053-17125072 None:intergenic 25.0%
!!! ATAAATTATCTTTGGTCTTG+CGG + chr7.4:17125706-17125725 MS.gene014135:intron 25.0%
!!! ATTTTGATAAGTCTAGTGTT+TGG - chr7.4:17125283-17125302 None:intergenic 25.0%
!!! TTTTCTCTAATTTGTTTCAG+GGG + chr7.4:17124539-17124558 MS.gene014135:intron 25.0%
AATGTTCAATTGTCTTACAC+AGG + chr7.4:17126148-17126167 MS.gene014135:CDS 30.0%
ACGATTGAGATTTGACTAAA+CGG - chr7.4:17124053-17124072 None:intergenic 30.0%
ACTGATATGTTAGATTTGCA+AGG - chr7.4:17123543-17123562 None:intergenic 30.0%
AGATTAGTATATCAAAGTGG+TGG - chr7.4:17124887-17124906 None:intergenic 30.0%
ATCAAACACGATAATAGTGT+TGG + chr7.4:17125513-17125532 MS.gene014135:intron 30.0%
ATGGAGTTAGAATTAAGACT+TGG + chr7.4:17124835-17124854 MS.gene014135:CDS 30.0%
ATGTGGGACATTTAATATTC+AGG + chr7.4:17123416-17123435 MS.gene014135:intron 30.0%
CTGATTAATTATTATGGGGT+TGG - chr7.4:17125803-17125822 None:intergenic 30.0%
CTTTAACATTAATCGAATCC+TGG - chr7.4:17124292-17124311 None:intergenic 30.0%
GAAAACATGAAGCTTCAATT+TGG - chr7.4:17125087-17125106 None:intergenic 30.0%
GTTCAGCAACTATTAGTTAA+TGG + chr7.4:17123769-17123788 MS.gene014135:CDS 30.0%
TAAGTGCATGTTTGGTATAA+TGG + chr7.4:17124977-17124996 MS.gene014135:intron 30.0%
TAATATTCAGGCATTCAAGA+AGG + chr7.4:17123428-17123447 MS.gene014135:intron 30.0%
TAATGTATCACCATCATCAT+AGG - chr7.4:17122946-17122965 None:intergenic 30.0%
TCAAAGATTATGGAGCTAAA+GGG + chr7.4:17123054-17123073 MS.gene014135:CDS 30.0%
TCAACGTATGTAGTAATAAG+CGG - chr7.4:17122912-17122931 None:intergenic 30.0%
TCGATTAATGTTAAAGCTTC+TGG + chr7.4:17124296-17124315 MS.gene014135:CDS 30.0%
TGAATATTAAATGTCCCACA+TGG - chr7.4:17123417-17123436 None:intergenic 30.0%
TTGGAAACTCAATGATTGTT+TGG - chr7.4:17125244-17125263 None:intergenic 30.0%
! AGGTACTGTTAGTAATAAAG+GGG - chr7.4:17125647-17125666 None:intergenic 30.0%
! ATTGGTGATATGAATTCCAT+CGG - chr7.4:17124357-17124376 None:intergenic 30.0%
! GCCGGTAATTTTAAACTTTA+AGG + chr7.4:17124857-17124876 MS.gene014135:intron 30.0%
! TCTAACATTTGATAGTTGCA+AGG + chr7.4:17124211-17124230 MS.gene014135:CDS 30.0%
!! AAAATCTCTAGCTCTATCAT+AGG + chr7.4:17124389-17124408 MS.gene014135:CDS 30.0%
!! AAGATTTCTGGAACTACAAA+TGG + chr7.4:17124816-17124835 MS.gene014135:CDS 30.0%
!! AGCTAGAGATTTTGATGTTT+TGG - chr7.4:17124382-17124401 None:intergenic 30.0%
!! GAGGTACTGTTAGTAATAAA+GGG - chr7.4:17125648-17125667 None:intergenic 30.0%
!! GATTTTGATGTTTTGGGTAT+TGG - chr7.4:17124375-17124394 None:intergenic 30.0%
!! GCTAGAGATTTTGATGTTTT+GGG - chr7.4:17124381-17124400 None:intergenic 30.0%
!!! TAGTTTTAACAAAATCACGG+TGG + chr7.4:17125205-17125224 MS.gene014135:intron 30.0%
!!! TGATTTTGTGTTGTTTATGC+AGG + chr7.4:17125955-17125974 MS.gene014135:intron 30.0%
AAAATCCAAGGACATCGTTT+CGG + chr7.4:17124773-17124792 MS.gene014135:CDS 35.0%
ACAAATTCACGTTTCATTCC+AGG + chr7.4:17124271-17124290 MS.gene014135:CDS 35.0%
ACAGTGAAGATCAAAGACAT+TGG + chr7.4:17123731-17123750 MS.gene014135:CDS 35.0%
AGTTAGAATTAAGACTTGGC+CGG + chr7.4:17124839-17124858 MS.gene014135:CDS 35.0%
ATGGAAAAGGAAACATATGG+TGG + chr7.4:17123806-17123825 MS.gene014135:CDS 35.0%
CAAAGATTATGGAGCTAAAG+GGG + chr7.4:17123055-17123074 MS.gene014135:CDS 35.0%
CAAATCTAACATATCAGTCC+AGG + chr7.4:17123545-17123564 MS.gene014135:CDS 35.0%
CAACGTATGTAGTAATAAGC+GGG - chr7.4:17122911-17122930 None:intergenic 35.0%
CAACTATTAGTTAATGGTGG+TGG + chr7.4:17123775-17123794 MS.gene014135:CDS 35.0%
CAGCAACTATTAGTTAATGG+TGG + chr7.4:17123772-17123791 MS.gene014135:CDS 35.0%
GGTACAACACATTGCTAATT+TGG - chr7.4:17125991-17126010 None:intergenic 35.0%
GTAATAAAGGGGAGTAAGTT+AGG - chr7.4:17125636-17125655 None:intergenic 35.0%
GTCAAAGATTATGGAGCTAA+AGG + chr7.4:17123053-17123072 MS.gene014135:CDS 35.0%
GTGTTGTACCAGAATATAAC+AGG + chr7.4:17126001-17126020 MS.gene014135:CDS 35.0%
TCGATGGAAAAGGAAACATA+TGG + chr7.4:17123803-17123822 MS.gene014135:CDS 35.0%
TGATCTTCACTGTAATCTGA+TGG - chr7.4:17123724-17123743 None:intergenic 35.0%
TGTATGTTTCCTCCATCTAT+TGG - chr7.4:17125540-17125559 None:intergenic 35.0%
TTAACAAAATCACGGTGGTT+TGG + chr7.4:17125210-17125229 MS.gene014135:intron 35.0%
TTTCCTATAATTGGCCATGT+GGG + chr7.4:17123400-17123419 MS.gene014135:intron 35.0%
! AATAGTGTTGGACCAATAGA+TGG + chr7.4:17125525-17125544 MS.gene014135:intron 35.0%
! ATATCTCAGTATTGGAAGCT+TGG + chr7.4:17124743-17124762 MS.gene014135:intron 35.0%
! ATATGAATTCCATCGGTGTT+AGG - chr7.4:17124350-17124369 None:intergenic 35.0%
! ATTTATTTAGTGGATCACGC+TGG - chr7.4:17125406-17125425 None:intergenic 35.0%
! CACTTTTGCCTGTTATATTC+TGG - chr7.4:17126012-17126031 None:intergenic 35.0%
! TATCTCAGTATTGGAAGCTT+GGG + chr7.4:17124744-17124763 MS.gene014135:intron 35.0%
! TATGTTTCCTTTTCCATCGA+TGG - chr7.4:17123803-17123822 None:intergenic 35.0%
! TGCATTTTTATCTCCTTGCA+TGG - chr7.4:17126076-17126095 None:intergenic 35.0%
! TTTTCCTATAATTGGCCATG+TGG + chr7.4:17123399-17123418 MS.gene014135:intron 35.0%
!! GGAGGTACTGTTAGTAATAA+AGG - chr7.4:17125649-17125668 None:intergenic 35.0%
!! TATGAATTCCATCGGTGTTA+GGG - chr7.4:17124349-17124368 None:intergenic 35.0%
AAACCAATGTATAGGAAGGG+AGG - chr7.4:17125667-17125686 None:intergenic 40.0%
AAATCCAAGGACATCGTTTC+GGG + chr7.4:17124774-17124793 MS.gene014135:CDS 40.0%
AAGTCTAGTGTTTGGCATCT+TGG - chr7.4:17125275-17125294 None:intergenic 40.0%
AAGTTAACTACCTGATGCCA+TGG - chr7.4:17124632-17124651 None:intergenic 40.0%
ACACTACAAGTACACCATAC+TGG + chr7.4:17125892-17125911 MS.gene014135:intron 40.0%
ATGAGAGGAGGAATTGTCTT+AGG - chr7.4:17122836-17122855 None:intergenic 40.0%
CAACAAACTCAGTGACGATT+TGG - chr7.4:17125137-17125156 None:intergenic 40.0%
CAGTGAGAAATTTCCATGCA+AGG + chr7.4:17126060-17126079 MS.gene014135:CDS 40.0%
CTCAAACCAATCAGATTCTC+TGG + chr7.4:17123516-17123535 MS.gene014135:CDS 40.0%
GAGCTATGTATACATACCGT+TGG - chr7.4:17124004-17124023 None:intergenic 40.0%
GATTCACCTTCCTATGATGA+TGG + chr7.4:17122933-17122952 MS.gene014135:CDS 40.0%
GGGAAGTAGTATGTGATTCA+GGG + chr7.4:17123454-17123473 MS.gene014135:CDS 40.0%
GTATCACCATCATCATAGGA+AGG - chr7.4:17122942-17122961 None:intergenic 40.0%
GTGAATGGAGCTAAGATTTC+TGG + chr7.4:17124804-17124823 MS.gene014135:CDS 40.0%
TCTTGCGGTGATTAAATGCA+GGG + chr7.4:17125721-17125740 MS.gene014135:intron 40.0%
TGGGAAGTAGTATGTGATTC+AGG + chr7.4:17123453-17123472 MS.gene014135:CDS 40.0%
TTGCAATAGCAACTTGCAAG+AGG + chr7.4:17122884-17122903 MS.gene014135:CDS 40.0%
TTGTTGCATAAAGCCTTAGC+AGG - chr7.4:17126130-17126149 None:intergenic 40.0%
TTTCGGACGTTTGATGCATT+TGG + chr7.4:17125103-17125122 MS.gene014135:intron 40.0%
! ATCTCAGTATTGGAAGCTTG+GGG + chr7.4:17124745-17124764 MS.gene014135:intron 40.0%
! GATTTTTCGTGCTTAGACCA+TGG + chr7.4:17122999-17123018 MS.gene014135:CDS 40.0%
! GCTATCTTTTGTAGCCAGTA+TGG - chr7.4:17125909-17125928 None:intergenic 40.0%
! TGATGACGATAGTGAATGAG+AGG - chr7.4:17122851-17122870 None:intergenic 40.0%
!! GTTTCGGGAGTATTAGTGAA+TGG + chr7.4:17124789-17124808 MS.gene014135:CDS 40.0%
!! TCTAGCTCTATCATAGGAAC+TGG + chr7.4:17124395-17124414 MS.gene014135:CDS 40.0%
ACAGACATTACTTGTGGACC+AGG + chr7.4:17124606-17124625 MS.gene014135:CDS 45.0%
AGAGGAGGAATTGTCTTAGG+AGG - chr7.4:17122833-17122852 None:intergenic 45.0%
ATTTCTGTGAGTTGCAGCGT+GGG - chr7.4:17126183-17126202 None:intergenic 45.0%
CAAGGACCAGAGAATCTGAT+TGG - chr7.4:17123525-17123544 None:intergenic 45.0%
CGGTCAATTCATGAGAGCAA+TGG - chr7.4:17125444-17125463 None:intergenic 45.0%
GAAGCCACAGACATTACTTG+TGG + chr7.4:17124600-17124619 MS.gene014135:CDS 45.0%
GATTAAATGCAGGGAGGTTC+AGG + chr7.4:17125730-17125749 MS.gene014135:intron 45.0%
GATTATGGAGCTAAAGGGGA+TGG + chr7.4:17123059-17123078 MS.gene014135:CDS 45.0%
GGTGGCAAAACTCATGCAAA+AGG + chr7.4:17123824-17123843 MS.gene014135:CDS 45.0%
GTACCTCCCTTCCTATACAT+TGG + chr7.4:17125661-17125680 MS.gene014135:intron 45.0%
GTCTTGCGGTGATTAAATGC+AGG + chr7.4:17125720-17125739 MS.gene014135:intron 45.0%
GTTGTTTATGCAGGACTCTG+CGG + chr7.4:17125964-17125983 MS.gene014135:intron 45.0%
TCAGGCATTCAAGAAGGCTT+GGG + chr7.4:17123434-17123453 MS.gene014135:intron 45.0%
TCTAGTGTTTGGCATCTTGG+TGG - chr7.4:17125272-17125291 None:intergenic 45.0%
TGAAGAAGGAGAACCTGCTA+AGG + chr7.4:17126114-17126133 MS.gene014135:CDS 45.0%
TGACGATAGTGAATGAGAGG+AGG - chr7.4:17122848-17122867 None:intergenic 45.0%
TGGTCATACCGATGATACAC+TGG + chr7.4:17123079-17123098 MS.gene014135:CDS 45.0%
TGGTCCACAAGTAATGTCTG+TGG - chr7.4:17124607-17124626 None:intergenic 45.0%
TGTCCCACATGGCCAATTAT+AGG - chr7.4:17123406-17123425 None:intergenic 45.0%
TTCAGGCATTCAAGAAGGCT+TGG + chr7.4:17123433-17123452 MS.gene014135:intron 45.0%
! AGTGTTGGACCAATAGATGG+AGG + chr7.4:17125528-17125547 MS.gene014135:intron 45.0%
! TATTTAGTGGATCACGCTGG+AGG - chr7.4:17125403-17125422 None:intergenic 45.0%
! TATTTCTGTGAGTTGCAGCG+TGG - chr7.4:17126184-17126203 None:intergenic 45.0%
! TCAGTGACGATTTGGATCTG+CGG - chr7.4:17125129-17125148 None:intergenic 45.0%
! TCTCAGTATTGGAAGCTTGG+GGG + chr7.4:17124746-17124765 MS.gene014135:intron 45.0%
! TCTCTTTTTGCAGCCTTGCA+AGG + chr7.4:17123973-17123992 MS.gene014135:intron 45.0%
!! TGGCATCTTGGTGGATTTGT+TGG - chr7.4:17125263-17125282 None:intergenic 45.0%
!! TTCAGGGCAAGCAGTTTTAG+TGG + chr7.4:17123470-17123489 MS.gene014135:CDS 45.0%
ATTACTTGTGGACCAGGCCA+TGG + chr7.4:17124612-17124631 MS.gene014135:CDS 50.0%
GAGAACGTGAAGTGACACCA+TGG - chr7.4:17123019-17123038 None:intergenic 50.0%
GGTGGAACCATCGATGGAAA+AGG + chr7.4:17123793-17123812 MS.gene014135:CDS 50.0%
GTCTCAATGTGTCATCGCCA+GGG + chr7.4:17124318-17124337 MS.gene014135:CDS 50.0%
TACTCCCGAAACGATGTCCT+TGG - chr7.4:17124781-17124800 None:intergenic 50.0%
TGCGGTGATTAAATGCAGGG+AGG + chr7.4:17125724-17125743 MS.gene014135:intron 50.0%
!! AATGGTGGTGGAACCATCGA+TGG + chr7.4:17123787-17123806 MS.gene014135:CDS 50.0%
AACTACCTGATGCCATGGCC+TGG - chr7.4:17124627-17124646 None:intergenic 55.0%
CTTGGGGGCTGGAAAATCCA+AGG + chr7.4:17124761-17124780 MS.gene014135:CDS 55.0%
GCCTTGCAAGGATGCTCCAA+CGG + chr7.4:17123985-17124004 MS.gene014135:intron 55.0%
GGGAATAGCCCTAACACCGA+TGG + chr7.4:17124338-17124357 MS.gene014135:CDS 55.0%
GGTCTCAATGTGTCATCGCC+AGG + chr7.4:17124317-17124336 MS.gene014135:CDS 55.0%
! ACCGTTGGAGCATCCTTGCA+AGG - chr7.4:17123989-17124008 None:intergenic 55.0%
! AGTATTGGAAGCTTGGGGGC+TGG + chr7.4:17124750-17124769 MS.gene014135:intron 55.0%
!! TCGGTGTTAGGGCTATTCCC+TGG - chr7.4:17124338-17124357 None:intergenic 55.0%
GTGGACCAGGCCATGGCATC+AGG + chr7.4:17124619-17124638 MS.gene014135:CDS 65.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 17122825 17126213 17122825 ID=MS.gene014135
chr7.4 mRNA 17122825 17126213 17122825 ID=MS.gene014135.t1;Parent=MS.gene014135
chr7.4 exon 17122825 17123100 17122825 ID=MS.gene014135.t1.exon1;Parent=MS.gene014135.t1
chr7.4 CDS 17122825 17123100 17122825 ID=cds.MS.gene014135.t1;Parent=MS.gene014135.t1
chr7.4 exon 17123438 17123566 17123438 ID=MS.gene014135.t1.exon2;Parent=MS.gene014135.t1
chr7.4 CDS 17123438 17123566 17123438 ID=cds.MS.gene014135.t1;Parent=MS.gene014135.t1
chr7.4 exon 17123691 17123858 17123691 ID=MS.gene014135.t1.exon3;Parent=MS.gene014135.t1
chr7.4 CDS 17123691 17123858 17123691 ID=cds.MS.gene014135.t1;Parent=MS.gene014135.t1
chr7.4 exon 17123986 17124006 17123986 ID=MS.gene014135.t1.exon4;Parent=MS.gene014135.t1
chr7.4 CDS 17123986 17124006 17123986 ID=cds.MS.gene014135.t1;Parent=MS.gene014135.t1
chr7.4 exon 17124209 17124416 17124209 ID=MS.gene014135.t1.exon5;Parent=MS.gene014135.t1
chr7.4 CDS 17124209 17124416 17124209 ID=cds.MS.gene014135.t1;Parent=MS.gene014135.t1
chr7.4 exon 17124559 17124640 17124559 ID=MS.gene014135.t1.exon6;Parent=MS.gene014135.t1
chr7.4 CDS 17124559 17124640 17124559 ID=cds.MS.gene014135.t1;Parent=MS.gene014135.t1
chr7.4 exon 17124752 17124860 17124752 ID=MS.gene014135.t1.exon7;Parent=MS.gene014135.t1
chr7.4 CDS 17124752 17124860 17124752 ID=cds.MS.gene014135.t1;Parent=MS.gene014135.t1
chr7.4 exon 17125742 17125861 17125742 ID=MS.gene014135.t1.exon8;Parent=MS.gene014135.t1
chr7.4 CDS 17125742 17125861 17125742 ID=cds.MS.gene014135.t1;Parent=MS.gene014135.t1
chr7.4 exon 17125977 17126213 17125977 ID=MS.gene014135.t1.exon9;Parent=MS.gene014135.t1
chr7.4 CDS 17125977 17126213 17125977 ID=cds.MS.gene014135.t1;Parent=MS.gene014135.t1
Gene Sequence

>MS.gene014135

ATGGTCCTCCTAAGACAATTCCTCCTCTCATTCACTATCGTCATCATTTCATTTGTTGCTTGCAATAGCAACTTGCAAGAGGACCCGCTTATTACTACATACGTTGATGATTCACCTTCCTATGATGATGGTGATACATTATTATTCAAGAACTTGGTTGAGCAAAACACAAATGATTTTTCGTGCTTAGACCATGGTGTCACTTCACGTTCTCTTAAAATTGTTAATGTCAAAGATTATGGAGCTAAAGGGGATGGTCATACCGATGATACACTGGTATATTAATAAACTCATCATATATAGCTTAAAAATCATAATATATTCATCTAGTCCAAGATATTTTTTGTTTTTAATTTTTGTTTTGTTTTCAATTATAACAATGGGTTACAAAAGAAAATTAACAATAGAACTATTGATAAATTTCATATTTTTTTCTCTCTTTTTTTTTTTGAGAGAATATTTTTTTCTCTCTAAATTTATACCACTAATTTAATATTTTGTATGCCTATACTAATTTGGTTTTCTTATGATTAAAAAAGCAACATTAATTGATCTTCTAAAAAAATAACTTAAATTTTCCTATAATTGGCCATGTGGGACATTTAATATTCAGGCATTCAAGAAGGCTTGGGAAGTAGTATGTGATTCAGGGCAAGCAGTTTTAGTGGCACCTCAAGATTATAATTATCTACTCAAACCAATCAGATTCTCTGGTCCTTGCAAATCTAACATATCAGTCCAGGTTAGTTACATTAAATATTAAGCCAGTGATTAATTAACTAATTAGTTCTTTCTTTTTTAAGCTCCACACTTTTAAGTAAATTATAATCTCAAAAAGTAGCCTTTTTCAAAAATTTAATTGACAGATATCTGGAAGTCTTGAAGCATCAGATAATCCATCAGATTACAGTGAAGATCAAAGACATTGGCTTGTATTTGAGCAAGTTCAGCAACTATTAGTTAATGGTGGTGGAACCATCGATGGAAAAGGAAACATATGGTGGCAAAACTCATGCAAAAGGAACAAAAAGAAAGTAAGATATCACAATTACGTCCCAATATTTTAATCAAGTCAATTATATGCATCAATGAATCTATATAATTAATCATATTCAAATTAATTATGACCAACTTTTTTATGCTTTTTCTCTCTTTTTGCAGCCTTGCAAGGATGCTCCAACGGTATGTATACATAGCTCTACCTAAATTTTCTCAACAATTTAGTCCGTTTAGTCAAATCTCAATCGTTGAGCATATATAAATTGAACATTGTTTTAACAATTATGATTTGAATGTTCGGATTGACCTGTTACAGATTTCATAATCAAGGATTTTAATTGGATATGCTTGTTAATTAACTAACTAACTAACTTTATTTTTGTAGGCTCTAACATTTGATAGTTGCAAGGACTTAATAGTTGACGATTTGACGATACAAAATGCGCAACAAATTCACGTTTCATTCCAGGATTCGATTAATGTTAAAGCTTCTGGTCTCAATGTGTCATCGCCAGGGAATAGCCCTAACACCGATGGAATTCATATCACCAATACCCAAAACATCAAAATCTCTAGCTCTATCATAGGAACTGGTATATTAATAATTAAACATCTAAAAAATTTGAAAAAAAATTACAAGATTAGGAATGAAATTCATATGTTTTTTAGACAAATTAAAATTTATATATGTATATTCATAATTAGTTAATTTGATTTTTCTCTAATTTGTTTCAGGGGACGATTGTATATCAATTGTAGATGGATCTAGTAATGTAGAAGCCACAGACATTACTTGTGGACCAGGCCATGGCATCAGGTAGTTAACTTGTGAAATTCAAGTTTTATTTTTGTAATTAATATCAGTTTTATTATATTGTATTATTTGTACATGAATTTTATTTTATTTGCAATGATTTATATATCTCAGTATTGGAAGCTTGGGGGCTGGAAAATCCAAGGACATCGTTTCGGGAGTATTAGTGAATGGAGCTAAGATTTCTGGAACTACAAATGGAGTTAGAATTAAGACTTGGCCGGTAATTTTAAACTTTAAGGAGTTCCACCACTTTGATATACTAATCTATCATCCACTAAATATGATGATTGACAAAATATCATTTCTCATAGATAACTTTTACAAATTCTTTTAAAATAAGTGCATGTTTGGTATAATGGTGAGTATGTGTGTTGTTTATCATTCTATAAAACTTATGTTTACTCATTTTCCAATGCTTTTGTTTAACGTAAAAGTCAAACTCTCCAAATTGAAGCTTCATGTTTTCGGACGTTTGATGCATTTGGCCGCAGATCCAAATCGTCACTGAGTTTGTTGAAATCATGATAAGTCATCGTGATTTTGTAAAAAAAAAATTAAAAAATGTAGTTTTAACAAAATCACGGTGGTTTGGCTACATATCCAAACAATCATTGAGTTTCCAACAAATCCACCAAGATGCCAAACACTAGACTTATCAAAATCTAAATAATCGAGTTCAATTTTGCTCAATTTACTTTATTCCATTTATTGTCAATTTATGAGAGAGATAAACATAAATGATAGTTTAATCAGTGGGATCCTCCAGCGTGATCCACTAAATAAATAAATATTTCTCGTGTCCATTGCTCTCATGAATTGACCGTTAGTGAAGCAAAGTAAATAGAGCAAAGTGAAACTCTGATTAAACACTAATCAAACACGATAATAGTGTTGGACCAATAGATGGAGGAAACATACACTAGTGCATACGTTTTGAAAGCATGAAATGAAAGCAAGATTATGAAAATTGAATTCTTTATATTGATCATAGTCCTAACTTACTCCCCTTTATTACTAACAGTACCTCCCTTCCTATACATTGGTTTATATTTAAACAAATAAGGCATAAATTATCTTTGGTCTTGCGGTGATTAAATGCAGGGAGGTTCAGGAAGTGCTAGCAACATCAAATTTCAGAACATTGAAATGGACAATGTGACCAACCCCATAATAATTAATCAGAATTACTGTGACAAGAAAAAAAAGCCATGTAAAAAAATGGTAAATTATTTTTCACAACTCTTGCTATATACACTACAAGTACACCATACTGGCTACAAAAGATAGCTACTTACATTTTTTTTTTATTTTTTATGATTTTGTGTTGTTTATGCAGGACTCTGCGGTCCAAATTAGCAATGTGTTGTACCAGAATATAACAGGCAAAAGTGCTTCTGATATAGCTGTAAAGTTTGATTGCAGTGAGAAATTTCCATGCAAGGAGATAAAAATGCAAAACATACTCTTAATATGTGAAGAAGGAGAACCTGCTAAGGCTTTATGCAACAATGTTCAATTGTCTTACACAGGAAATGTTAACCCACGCTGCAACTCACAGAAATATACAAATTAA
Protein sequence

>MS.gene014135.t1

MVLLRQFLLSFTIVIISFVACNSNLQEDPLITTYVDDSPSYDDGDTLLFKNLVEQNTNDFSCLDHGVTSRSLKIVNVKDYGAKGDGHTDDTLAFKKAWEVVCDSGQAVLVAPQDYNYLLKPIRFSGPCKSNISVQISGSLEASDNPSDYSEDQRHWLVFEQVQQLLVNGGGTIDGKGNIWWQNSCKRNKKKPCKDAPTALTFDSCKDLIVDDLTIQNAQQIHVSFQDSINVKASGLNVSSPGNSPNTDGIHITNTQNIKISSSIIGTGDDCISIVDGSSNVEATDITCGPGHGISIGSLGAGKSKDIVSGVLVNGAKISGTTNGVRIKTWPGGSGSASNIKFQNIEMDNVTNPIIINQNYCDKKKKPCKKMDSAVQISNVLYQNITGKSASDIAVKFDCSEKFPCKEIKMQNILLICEEGEPAKALCNNVQLSYTGNVNPRCNSQKYTN