AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene017912

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene017912.t1 MTR_7g091850 81.596 451 67 4 1 436 1 450 0.0 704
MS.gene017912.t1 MTR_7g091840 90.186 377 32 2 1 372 1 377 0.0 678
MS.gene017912.t1 MTR_1g052315 62.069 435 142 9 13 429 1 430 0.0 522
MS.gene017912.t1 MTR_2g060350 49.764 424 194 9 11 418 11 431 3.67e-135 395
MS.gene017912.t1 MTR_3g030540 51.408 426 189 9 7 419 6 426 1.81e-127 376
MS.gene017912.t1 MTR_2g103410 47.861 374 191 4 61 431 58 430 1.84e-117 351
MS.gene017912.t1 MTR_8g065030 44.231 364 201 2 61 423 64 426 8.94e-112 337
MS.gene017912.t1 MTR_6g005630 44.126 349 186 4 55 402 38 378 5.23e-99 303
MS.gene017912.t1 MTR_4g094715 40.838 382 210 8 61 429 64 442 1.17e-91 285
MS.gene017912.t1 MTR_2g435640 39.948 383 216 9 55 429 46 422 1.76e-90 281
MS.gene017912.t1 MTR_1g086390 41.011 356 193 7 61 403 80 431 2.14e-88 277
MS.gene017912.t1 MTR_5g034090 40.379 369 190 5 61 402 120 485 3.65e-88 278
MS.gene017912.t1 MTR_4g083660 43.094 362 199 6 56 415 3 359 5.21e-86 268
MS.gene017912.t1 MTR_7g110050 39.831 354 199 6 61 403 66 416 1.93e-84 266
MS.gene017912.t1 MTR_8g030930 40.789 380 208 9 60 429 25 397 1.94e-84 264
MS.gene017912.t1 MTR_6g005630 40.974 349 174 6 55 402 38 355 3.16e-84 264
MS.gene017912.t1 MTR_7g113910 38.235 408 167 7 7 413 11 334 2.20e-83 261
MS.gene017912.t1 MTR_2g103650 38.727 377 219 8 62 429 28 401 7.98e-83 260
MS.gene017912.t1 MTR_2g049400 40.701 371 207 8 63 429 29 390 1.36e-82 259
MS.gene017912.t1 MTR_8g065010 38.172 372 193 5 62 402 107 472 2.38e-82 263
MS.gene017912.t1 MTR_4g084050 38.947 380 211 7 62 429 23 393 6.08e-82 258
MS.gene017912.t1 MTR_2g032710 40.489 368 205 6 51 407 56 420 3.15e-81 258
MS.gene017912.t1 MTR_2g103410 47.876 259 133 2 61 317 58 316 8.31e-81 253
MS.gene017912.t1 MTR_3g438050 39.370 381 217 8 56 429 21 394 9.17e-81 254
MS.gene017912.t1 MTR_3g084360 39.726 365 204 7 62 419 24 379 7.54e-80 252
MS.gene017912.t1 MTR_4g120320 39.096 376 214 10 60 427 50 418 4.30e-79 251
MS.gene017912.t1 MTR_1g012390 38.889 378 213 10 58 427 24 391 5.68e-79 250
MS.gene017912.t1 MTR_5g033680 37.752 347 207 4 62 402 59 402 7.87e-79 252
MS.gene017912.t1 MTR_5g043350 39.835 364 202 7 62 417 29 383 1.57e-78 249
MS.gene017912.t1 MTR_8g010080 40.771 363 190 10 61 417 30 373 7.20e-78 247
MS.gene017912.t1 MTR_3g084380 40.278 360 197 7 62 413 21 370 7.39e-78 247
MS.gene017912.t1 MTR_6g028080 39.237 367 198 9 62 416 30 383 4.18e-77 245
MS.gene017912.t1 MTR_3g054320 39.237 367 195 9 62 417 30 379 2.24e-76 243
MS.gene017912.t1 MTR_1g088160 37.151 358 211 9 61 412 34 383 3.73e-76 243
MS.gene017912.t1 MTR_8g010110 40.055 362 195 9 61 417 30 374 2.08e-75 241
MS.gene017912.t1 MTR_8g010090 39.394 363 196 10 61 417 30 374 6.76e-75 239
MS.gene017912.t1 MTR_0157s0060 39.385 358 199 6 66 417 2 347 2.15e-74 237
MS.gene017912.t1 MTR_4g034020 39.385 358 199 6 66 417 2 347 2.15e-74 237
MS.gene017912.t1 MTR_8g010070 40.385 364 192 11 61 417 30 375 2.16e-74 238
MS.gene017912.t1 MTR_8g008765 40.426 329 177 5 61 386 30 342 1.55e-73 234
MS.gene017912.t1 MTR_7g035415 41.751 297 154 7 61 350 39 323 5.48e-73 233
MS.gene017912.t1 MTR_8g009810 38.303 389 228 9 44 429 20 399 6.51e-73 234
MS.gene017912.t1 MTR_2g058640 36.436 376 224 8 61 429 24 391 1.41e-72 234
MS.gene017912.t1 MTR_8g010040 39.669 363 192 10 62 417 32 374 4.64e-72 232
MS.gene017912.t1 MTR_5g034090 41.197 284 140 3 61 317 120 403 1.85e-67 221
MS.gene017912.t1 MTR_1g013740 35.180 361 208 8 62 417 35 374 7.03e-66 216
MS.gene017912.t1 MTR_1g013730 36.288 361 204 8 62 417 27 366 1.30e-65 215
MS.gene017912.t1 MTR_2g058840 32.461 382 229 8 61 429 24 389 2.03e-65 216
MS.gene017912.t1 MTR_5g097860 36.858 331 199 7 52 378 16 340 2.18e-65 213
MS.gene017912.t1 MTR_2g058670 32.540 378 236 7 61 429 24 391 3.07e-65 215
MS.gene017912.t1 MTR_2g029170 39.937 318 178 9 104 416 38 347 2.28e-64 211
MS.gene017912.t1 MTR_5g063430 36.735 294 171 7 60 348 23 306 6.74e-61 201
MS.gene017912.t1 MTR_8g077320 38.532 327 155 7 61 372 32 327 1.29e-59 199
MS.gene017912.t1 MTR_8g010050 34.699 366 176 11 61 417 30 341 8.96e-58 194
MS.gene017912.t1 MTR_8g008700 40.221 271 144 4 121 389 14 268 2.08e-55 186
MS.gene017912.t1 MTR_8g031180 42.857 196 104 2 201 390 70 263 7.41e-46 160
MS.gene017912.t1 MTR_2g100040 28.841 371 202 10 38 401 2 317 3.60e-42 153
MS.gene017912.t1 MTR_4g124980 24.543 383 229 14 61 402 73 436 5.54e-22 98.6
MS.gene017912.t1 MTR_2g042740 24.093 386 227 14 61 402 55 418 1.32e-20 94.4
MS.gene017912.t1 MTR_5g090160 25.152 330 186 11 63 350 45 355 1.14e-18 88.2
MS.gene017912.t1 MTR_1g100050 23.426 397 255 15 66 427 54 436 4.41e-17 83.6
MS.gene017912.t1 MTR_3g449590 25.890 309 181 13 63 336 48 343 1.29e-16 82.0
MS.gene017912.t1 MTR_1g100060 23.892 406 259 15 64 433 95 486 1.70e-16 82.0
MS.gene017912.t1 MTR_1g100040 24.433 397 251 14 66 427 60 442 2.43e-16 81.3
MS.gene017912.t1 MTR_8g098840 23.571 420 263 18 53 432 35 436 6.93e-16 79.7
MS.gene017912.t1 MTR_3g096330 25.970 335 163 12 61 341 75 378 8.13e-16 80.5
MS.gene017912.t1 MTR_7g078680 24.934 381 225 16 63 402 56 416 2.14e-15 78.6
MS.gene017912.t1 MTR_1g086030 25.648 347 211 10 63 375 83 416 1.29e-14 76.3
MS.gene017912.t1 MTR_7g088550 24.262 305 188 11 66 337 54 348 2.22e-14 75.1
MS.gene017912.t1 MTR_7g110710 27.554 323 187 12 63 350 44 354 2.63e-14 75.1
MS.gene017912.t1 MTR_7g110710 27.554 323 187 12 63 350 44 354 2.93e-14 74.7
MS.gene017912.t1 MTR_8g028725 24.355 349 220 12 63 378 56 393 1.71e-13 72.4
MS.gene017912.t1 MTR_1g086030 27.966 236 150 5 152 375 85 312 3.06e-13 71.6
MS.gene017912.t1 MTR_1g099850 23.020 404 252 15 64 427 57 441 1.39e-12 69.7
MS.gene017912.t1 MTR_4g120730 23.291 395 238 14 53 402 27 401 1.12e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene017912.t1 AT2G41850 58.356 365 142 5 57 418 63 420 8.56e-138 402
MS.gene017912.t1 AT3G07970 50.812 431 196 8 1 420 5 430 3.36e-136 398
MS.gene017912.t1 AT3G57510 53.388 369 161 6 64 429 70 430 2.50e-132 388
MS.gene017912.t1 AT1G80170 48.907 366 180 4 43 402 30 394 1.58e-120 358
MS.gene017912.t1 AT1G70500 43.333 390 214 3 35 423 45 428 9.88e-112 337
MS.gene017912.t1 AT1G23460 45.330 364 197 2 61 423 42 404 6.77e-110 331
MS.gene017912.t1 AT1G23460 45.330 364 197 2 61 423 66 428 1.30e-109 331
MS.gene017912.t1 AT2G43890 40.947 359 201 7 62 417 29 379 2.06e-91 282
MS.gene017912.t1 AT1G56710 41.127 355 194 6 61 403 47 398 1.50e-90 281
MS.gene017912.t1 AT5G14650 41.813 342 192 5 62 402 51 386 1.51e-90 281
MS.gene017912.t1 AT1G10640 41.351 370 187 5 60 402 117 483 8.58e-90 282
MS.gene017912.t1 AT1G60590 40.214 373 190 5 60 402 121 490 9.84e-90 282
MS.gene017912.t1 AT2G43880 39.257 377 218 7 56 429 25 393 4.75e-89 276
MS.gene017912.t1 AT1G05660 40.909 374 207 9 61 429 27 391 3.64e-88 274
MS.gene017912.t1 AT1G02460 41.257 366 193 8 61 411 88 446 4.71e-88 276
MS.gene017912.t1 AT3G15720 41.085 387 205 7 59 432 14 390 4.89e-88 275
MS.gene017912.t1 AT3G15720 41.085 387 205 7 59 432 15 391 5.54e-88 275
MS.gene017912.t1 AT1G05650 41.389 360 197 9 61 415 27 377 1.10e-87 273
MS.gene017912.t1 AT1G80170 47.687 281 141 3 43 317 30 310 8.22e-87 268
MS.gene017912.t1 AT5G44840 38.933 375 216 6 60 429 22 388 1.85e-86 269
MS.gene017912.t1 AT3G26610 43.305 351 190 5 61 406 66 412 2.43e-86 271
MS.gene017912.t1 AT1G48100 39.167 360 206 5 54 403 72 428 2.98e-86 271
MS.gene017912.t1 AT3G15720 40.310 387 205 7 59 432 14 387 8.32e-85 267
MS.gene017912.t1 AT1G78400 39.394 363 208 7 60 416 33 389 2.99e-84 264
MS.gene017912.t1 AT2G33160 41.257 366 200 9 60 416 30 389 3.71e-83 269
MS.gene017912.t1 AT5G27530 40.220 363 195 6 60 417 51 396 6.16e-83 262
MS.gene017912.t1 AT4G18180 38.931 393 213 11 58 429 35 421 9.44e-83 261
MS.gene017912.t1 AT4G01890 39.503 362 201 8 61 407 64 422 1.65e-82 261
MS.gene017912.t1 AT1G17150 39.050 379 217 9 60 431 31 402 2.39e-82 259
MS.gene017912.t1 AT2G43860 41.555 373 205 8 62 429 33 397 4.41e-82 258
MS.gene017912.t1 AT5G17200 39.071 366 189 6 61 403 38 392 5.18e-81 256
MS.gene017912.t1 AT3G59850 39.467 375 214 9 60 429 21 387 4.37e-80 253
MS.gene017912.t1 AT4G35670 38.874 373 214 6 62 429 24 387 7.41e-80 252
MS.gene017912.t1 AT3G59850 39.467 375 214 9 60 429 65 431 9.14e-80 253
MS.gene017912.t1 AT2G43870 39.452 365 207 9 56 415 15 370 4.55e-79 250
MS.gene017912.t1 AT3G07840 38.760 387 209 10 54 429 18 387 5.82e-78 248
MS.gene017912.t1 AT1G43080 37.008 381 222 9 60 429 29 402 3.41e-77 246
MS.gene017912.t1 AT1G02790 39.429 350 196 8 61 407 51 387 2.80e-76 244
MS.gene017912.t1 AT3G07820 37.173 382 222 8 54 429 17 386 7.50e-76 242
MS.gene017912.t1 AT1G43090 37.500 368 212 9 60 416 29 389 1.02e-75 243
MS.gene017912.t1 AT2G15460 37.940 369 209 10 60 416 29 389 1.84e-75 241
MS.gene017912.t1 AT2G15450 36.911 382 221 10 60 429 29 402 2.19e-75 241
MS.gene017912.t1 AT1G43100 37.228 368 213 9 60 416 29 389 1.24e-74 240
MS.gene017912.t1 AT3G07830 37.950 361 211 7 75 429 34 387 1.76e-74 238
MS.gene017912.t1 AT4G13760 36.685 368 215 9 60 416 29 389 3.36e-74 238
MS.gene017912.t1 AT2G43880 39.936 313 178 6 56 365 25 330 1.29e-73 234
MS.gene017912.t1 AT5G48140 36.719 384 224 8 54 431 18 388 1.66e-73 236
MS.gene017912.t1 AT4G32380 38.554 332 192 5 76 402 41 365 2.39e-73 237
MS.gene017912.t1 AT2G15470 37.127 369 212 10 60 416 29 389 7.22e-73 234
MS.gene017912.t1 AT1G80140 38.922 334 186 7 98 426 6 326 1.50e-72 231
MS.gene017912.t1 AT2G40310 36.685 368 215 9 60 416 29 389 3.78e-72 233
MS.gene017912.t1 AT3G15720 39.403 335 187 5 104 432 3 327 1.56e-71 231
MS.gene017912.t1 AT5G44830 37.752 347 193 6 88 429 1 329 3.32e-71 228
MS.gene017912.t1 AT1G65570 38.227 361 209 10 62 416 31 383 3.92e-71 230
MS.gene017912.t1 AT2G26620 37.158 366 214 9 60 416 29 387 3.95e-71 230
MS.gene017912.t1 AT3G14040 38.400 375 212 11 62 426 71 436 3.07e-70 229
MS.gene017912.t1 AT3G07850 37.867 375 214 11 62 426 70 435 2.26e-68 224
MS.gene017912.t1 AT5G14650 40.467 257 149 3 62 317 51 304 4.05e-64 209
MS.gene017912.t1 AT4G32375 38.754 289 168 2 143 429 13 294 3.02e-63 210
MS.gene017912.t1 AT4G32370 40.767 287 154 7 76 353 49 328 3.13e-62 205
MS.gene017912.t1 AT5G39910 36.513 304 166 6 61 358 35 317 2.17e-60 201
MS.gene017912.t1 AT4G35670 39.583 288 164 3 143 429 2 280 6.70e-60 197
MS.gene017912.t1 AT4G32380 32.500 360 190 6 76 429 41 353 6.98e-57 193
MS.gene017912.t1 AT3G42950 25.575 391 215 12 61 402 65 428 6.25e-23 101
MS.gene017912.t1 AT1G19170 24.297 391 221 16 61 402 86 450 2.48e-20 93.6
MS.gene017912.t1 AT2G23900 24.257 404 258 15 64 432 58 448 8.75e-18 85.9
MS.gene017912.t1 AT4G33440 24.561 456 247 15 7 395 22 447 1.68e-17 85.1
MS.gene017912.t1 AT3G06770 25.320 391 223 12 55 400 36 402 3.85e-17 83.6
MS.gene017912.t1 AT4G23820 25.779 353 202 15 63 372 42 377 4.33e-17 83.6
MS.gene017912.t1 AT3G06770 25.320 391 223 12 55 400 37 403 4.35e-17 83.6
MS.gene017912.t1 AT3G62110 23.922 464 289 17 5 433 3 437 2.62e-15 78.2
MS.gene017912.t1 AT3G62110 23.922 464 289 17 5 433 3 437 2.62e-15 78.2
MS.gene017912.t1 AT4G23500 23.691 401 255 17 63 427 69 454 2.70e-15 78.2
MS.gene017912.t1 AT5G41870 24.308 325 201 12 60 350 43 356 8.73e-15 76.6
MS.gene017912.t1 AT3G48950 22.947 414 251 15 64 432 47 437 1.05e-14 76.3
MS.gene017912.t1 AT3G61490 23.821 403 254 16 63 427 46 433 2.35e-14 75.1
MS.gene017912.t1 AT3G61490 23.821 403 254 16 63 427 46 433 2.35e-14 75.1
MS.gene017912.t1 AT3G61490 23.821 403 254 16 63 427 46 433 2.35e-14 75.1
MS.gene017912.t1 AT3G61490 23.821 403 254 16 63 427 61 448 3.03e-14 75.1
MS.gene017912.t1 AT3G61490 23.919 393 246 16 63 417 159 536 3.70e-14 75.1
MS.gene017912.t1 AT3G06770 26.199 271 169 7 148 400 58 315 6.76e-13 70.1
MS.gene017912.t1 AT3G06770 26.199 271 169 7 148 400 76 333 6.78e-13 70.1
MS.gene017912.t1 AT3G06770 26.199 271 169 7 148 400 76 333 6.78e-13 70.1

Find 93 sgRNAs with CRISPR-Local

Find 211 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTATGACACATTGCTAATT+TGG 0.120438 7.1:-15367387 None:intergenic
GTGAATGGAGCTAAGATTTC+TGG 0.145479 7.1:+15366436 MS.gene017912:CDS
ACAAATCCATATTTCATTTC+AGG 0.195474 7.1:+15365303 MS.gene017912:CDS
TCGGTTAATGTTACAGCTTC+TGG 0.250981 7.1:+15365328 MS.gene017912:CDS
CCGAATCCTGAAATGAAATA+TGG 0.268272 7.1:-15365309 None:intergenic
GTTCAACAACTATTAGTTAA+TGG 0.273645 7.1:+15364789 MS.gene017912:CDS
TGGGAAGTAGTATGTTCTTC+AGG 0.283522 7.1:+15364499 MS.gene017912:CDS
AAATTTAATTGACAGATATC+TGG 0.297808 7.1:+15364696 MS.gene017912:intron
TCATTGAAATATACAAATTA+AGG 0.298953 7.1:+15367592 MS.gene017912:CDS
AAATCCAGGGACATTGTTTC+GGG 0.300030 7.1:+15366406 MS.gene017912:CDS
GGTTAAATGCAGGGAGGTTC+AGG 0.324538 7.1:+15367145 MS.gene017912:intron
ATTTCAATGAGCCGCAGTTT+GGG 0.346475 7.1:-15367579 None:intergenic
CCATATTTCATTTCAGGATT+CGG 0.351816 7.1:+15365309 MS.gene017912:CDS
AAAATCCAGGGACATTGTTT+CGG 0.353625 7.1:+15366405 MS.gene017912:CDS
TATTTCAATGAGCCGCAGTT+TGG 0.369531 7.1:-15367580 None:intergenic
AACTAATAGTTGTTGAACTT+TGG 0.373745 7.1:-15364784 None:intergenic
TATCTTAGTATTGGAAGCTT+GGG 0.374211 7.1:+15366376 MS.gene017912:intron
ATGAGAGGAGGAAATGTCTT+AGG 0.383327 7.1:-15364154 None:intergenic
CACATTTCAGAACATTGAAA+TGG 0.390271 7.1:+15367183 MS.gene017912:CDS
GTGTCATACCTGAATATAAC+AGG 0.395209 7.1:+15367400 MS.gene017912:CDS
AAGATTTCTGGAACTACAAA+TGG 0.398447 7.1:+15366448 MS.gene017912:CDS
GCGGACCAGGCCATGGCATC+AGG 0.406952 7.1:+15365664 MS.gene017912:CDS
CAAGGACCAGAGAATCTGAT+TGG 0.415737 7.1:-15364568 None:intergenic
ACATGAATTCCATCCGTGTT+AGG 0.419206 7.1:-15365379 None:intergenic
ATATCTTAGTATTGGAAGCT+TGG 0.428320 7.1:+15366375 MS.gene017912:intron
TTCAGGCATTCGAGAAGGCT+TGG 0.431825 7.1:+15364479 MS.gene017912:intron
GTCGATGATTATGGAGCTAA+AGG 0.435348 7.1:+15364335 MS.gene017912:CDS
TAATTTACCATTTGTTTACA+TGG 0.435991 7.1:-15367262 None:intergenic
CTCAAACCAATCAGATTCTC+TGG 0.441568 7.1:+15364562 MS.gene017912:CDS
GATTGTATATCAATTGTAGA+TGG 0.452714 7.1:+15365609 MS.gene017912:CDS
CGCTACCTGATGCCATGGCC+TGG 0.453593 7.1:-15365669 None:intergenic
TCAGGCATTCGAGAAGGCTT+GGG 0.458704 7.1:+15364480 MS.gene017912:intron
GTTTCGGGAGTATTAGTGAA+TGG 0.461707 7.1:+15366421 MS.gene017912:CDS
AACATAGACTTGATATATGA+TGG 0.466309 7.1:+15367496 MS.gene017912:CDS
TTGGTCAATTATTATAGGGT+TGG 0.477376 7.1:-15367215 None:intergenic
TGCATTTCTATCTCCTTGCA+TGG 0.477492 7.1:-15367472 None:intergenic
TGGTCTCATTGTGGCATCAC+CGG 0.491708 7.1:+15365348 MS.gene017912:CDS
TTGTTGCATATAGCCTTGGC+TGG 0.493962 7.1:-15367523 None:intergenic
TACTCCCGAAACAATGTCCC+TGG 0.495411 7.1:-15366410 None:intergenic
TGGTCCGCAAGTTATGTTTG+TGG 0.496099 7.1:-15365649 None:intergenic
GGGAAGTAGTATGTTCTTCA+GGG 0.496325 7.1:+15364500 MS.gene017912:CDS
TCGATGATTATGGAGCTAAA+GGG 0.500138 7.1:+15364336 MS.gene017912:CDS
TGATCTTCACTGTAATCTGA+TGG 0.503126 7.1:-15364741 None:intergenic
TCAACGTATGTAGTAATAAG+TGG 0.504104 7.1:-15364230 None:intergenic
AACATTGTTGCATATAGCCT+TGG 0.504686 7.1:-15367527 None:intergenic
TCTAGCTCTATCGCAGCAGC+TGG 0.519170 7.1:+15365427 MS.gene017912:CDS
GGTGGCAAAACTCATGCAAA+AGG 0.522181 7.1:+15364844 MS.gene017912:CDS
ACAAACATAACTTGCGGACC+AGG 0.540843 7.1:+15365651 MS.gene017912:CDS
CAAATCTAATGTATCAGTCC+AGG 0.542567 7.1:+15364591 MS.gene017912:CDS
AAATTTGAAGTGAACGGGAA+AGG 0.542887 7.1:-15364307 None:intergenic
ATCTTAGTATTGGAAGCTTG+GGG 0.543845 7.1:+15366377 MS.gene017912:intron
CAACTATTAGTTAATGGTGG+TGG 0.545431 7.1:+15364795 MS.gene017912:CDS
CAGTAAGAAATTTCCATGCA+AGG 0.545752 7.1:+15367459 MS.gene017912:CDS
TAGACGGAAAAGGAAACATA+TGG 0.546731 7.1:+15364823 MS.gene017912:CDS
GGTGGAACCCTAGACGGAAA+AGG 0.550821 7.1:+15364813 MS.gene017912:CDS
ACTGATACATTAGATTTGCA+AGG 0.559269 7.1:-15364586 None:intergenic
TACAGCTTCTGGTCTCATTG+TGG 0.565673 7.1:+15365339 MS.gene017912:CDS
AGTTAGAATTAAGACTTGGC+CGG 0.569890 7.1:+15366471 MS.gene017912:CDS
AGTAGATAAATATTATCTTG+AGG 0.574660 7.1:-15364541 None:intergenic
TAGTTCGCTACCTGATGCCA+TGG 0.577254 7.1:-15365674 None:intergenic
GCCTTGCAAGGATGCTCCAA+CGG 0.583678 7.1:+15365007 MS.gene017912:intron
TCAGATTACAGTGAAGATCA+AGG 0.584050 7.1:+15364744 MS.gene017912:CDS
ATAACTTGCGGACCAGGCCA+TGG 0.586221 7.1:+15365657 MS.gene017912:CDS
AATGGTGGTGGAACCCTAGA+CGG 0.587941 7.1:+15364807 MS.gene017912:CDS
AACAAATGAAATGATGATGA+TGG 0.588388 7.1:-15364180 None:intergenic
ACTACATACGTTGATGATGA+TGG 0.588826 7.1:+15364239 MS.gene017912:CDS
ACCGTTGGAGCATCCTTGCA+AGG 0.589497 7.1:-15365008 None:intergenic
TTGCAATAGCAACTTGCAAG+AGG 0.593871 7.1:+15364205 MS.gene017912:CDS
TAATATTCAGGCATTCGAGA+AGG 0.594551 7.1:+15364474 MS.gene017912:intron
CGATGATTATGGAGCTAAAG+GGG 0.599082 7.1:+15364337 MS.gene017912:CDS
TGATGATGATGGTGAATGAG+AGG 0.600422 7.1:-15364169 None:intergenic
CAACGTATGTAGTAATAAGT+GGG 0.610682 7.1:-15364229 None:intergenic
GAGGATAGTCCTAACACGGA+TGG 0.610894 7.1:+15365370 MS.gene017912:CDS
GATTATGGAGCTAAAGGGGA+TGG 0.614396 7.1:+15364341 MS.gene017912:CDS
ATGGAGTTAGAATTAAGACT+TGG 0.618304 7.1:+15366467 MS.gene017912:CDS
CAACAACTATTAGTTAATGG+TGG 0.624830 7.1:+15364792 MS.gene017912:CDS
GGAAGTAGTATGTTCTTCAG+GGG 0.627265 7.1:+15364501 MS.gene017912:CDS
ACAGTGAAGATCAAGGACAT+TGG 0.627832 7.1:+15364751 MS.gene017912:CDS
TTTCAATGAGCCGCAGTTTG+GGG 0.630109 7.1:-15367578 None:intergenic
TCTGACGTTTGATAATTGCA+AGG 0.636252 7.1:+15365243 MS.gene017912:CDS
TCCGTGTTAGGACTATCCTC+CGG 0.636638 7.1:-15365367 None:intergenic
TTGATCAAGCAAAACACATG+TGG 0.642969 7.1:+15364284 MS.gene017912:CDS
TGATGATGGTGAATGAGAGG+AGG 0.645161 7.1:-15364166 None:intergenic
ATATGATGGAGAACCAGCCA+AGG 0.648729 7.1:+15367510 MS.gene017912:CDS
TCTTAGTATTGGAAGCTTGG+GGG 0.650863 7.1:+15366378 MS.gene017912:intron
TCTCATTGTGGCATCACCGG+AGG 0.661986 7.1:+15365351 MS.gene017912:CDS
GTTGTTTATTCAGGACTCTG+CGG 0.674299 7.1:+15367363 MS.gene017912:intron
TGGTCAAACTGATGACACAC+AGG 0.686944 7.1:+15364361 MS.gene017912:CDS
ACCGGAGGATAGTCCTAACA+CGG 0.688656 7.1:+15365366 MS.gene017912:CDS
ACGGAAAAGGAAACATATGG+TGG 0.700504 7.1:+15364826 MS.gene017912:CDS
GAAGCCACAAACATAACTTG+CGG 0.718028 7.1:+15365645 MS.gene017912:CDS
GTACAAGCTGCCCCAAACTG+CGG 0.740909 7.1:+15367568 MS.gene017912:CDS
ACATACGTTGATGATGATGG+TGG 0.752844 7.1:+15364242 MS.gene017912:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTAAAATTTGATATTAC+CGG - chr7.1:15366493-15366512 None:intergenic 10.0%
!! AGTTGATTATTAAATATAAA+GGG - chr7.1:15367096-15367115 None:intergenic 10.0%
!! TAGTTGATTATTAAATATAA+AGG - chr7.1:15367097-15367116 None:intergenic 10.0%
!! TTCAAAAAAAAAAAAAAACT+TGG - chr7.1:15366260-15366279 None:intergenic 10.0%
!!! AAGTTTTTTTTTTTTTTTGA+AGG + chr7.1:15366259-15366278 MS.gene017912:intron 10.0%
!! ACAAAAAAATTACAAGAATT+AGG + chr7.1:15365483-15365502 MS.gene017912:intron 15.0%
!! GTTGATTATTAAATATAAAG+GGG - chr7.1:15367095-15367114 None:intergenic 15.0%
!! TATTTATACATTCAACAATT+CGG - chr7.1:15366192-15366211 None:intergenic 15.0%
!! TCATAATGAAAGATATTAAT+TGG + chr7.1:15365179-15365198 MS.gene017912:intron 15.0%
!! TGACTTGATTAAAAAATATT+GGG - chr7.1:15364903-15364922 None:intergenic 15.0%
!! TGATTTATATATCTTAGTAT+TGG + chr7.1:15366367-15366386 MS.gene017912:intron 15.0%
!! TTATTCATATTTACTCAAAT+AGG + chr7.1:15365895-15365914 MS.gene017912:intron 15.0%
!! TTCTTAAATAGATAATGATT+AGG - chr7.1:15365997-15366016 None:intergenic 15.0%
!!! AAAAAATTGTTAACTTTTTC+AGG - chr7.1:15365832-15365851 None:intergenic 15.0%
!!! AATTTTGGTCAATTATTATA+GGG - chr7.1:15367222-15367241 None:intergenic 15.0%
!!! GAAATATTTTATTGATTTAG+TGG - chr7.1:15366870-15366889 None:intergenic 15.0%
!!! TAATTTTGGTCAATTATTAT+AGG - chr7.1:15367223-15367242 None:intergenic 15.0%
!!! TTGACTTGATTAAAAAATAT+TGG - chr7.1:15364904-15364923 None:intergenic 15.0%
!! AAATTTAATTGACAGATATC+TGG + chr7.1:15364696-15364715 MS.gene017912:intron 20.0%
!! ACACTATTATTGTGTTTAAT+TGG - chr7.1:15366966-15366985 None:intergenic 20.0%
!! AGTAGATAAATATTATCTTG+AGG - chr7.1:15364544-15364563 None:intergenic 20.0%
!! ATATATTATACACAAAAGCA+AGG - chr7.1:15366523-15366542 None:intergenic 20.0%
!! ATTAAACACAATAATAGTGT+TGG + chr7.1:15366966-15366985 MS.gene017912:intron 20.0%
!! CTAAATAGTTAATTAATCAC+TGG - chr7.1:15364638-15364657 None:intergenic 20.0%
!! CTAAATTGATGAGAAAATTT+AGG - chr7.1:15365051-15365070 None:intergenic 20.0%
!! TAACTTAATTGTTGAAATCA+TGG + chr7.1:15366629-15366648 MS.gene017912:intron 20.0%
!! TAATTTACCATTTGTTTACA+TGG - chr7.1:15367265-15367284 None:intergenic 20.0%
!! TATATTATACACAAAAGCAA+GGG - chr7.1:15366522-15366541 None:intergenic 20.0%
!! TTGAATTCTTTATTGATCAT+AGG + chr7.1:15367058-15367077 MS.gene017912:intron 20.0%
!! TTTCAACAATTAAGTTAATC+AGG - chr7.1:15366626-15366645 None:intergenic 20.0%
!!! ACTAAGACATAAATTTTCTT+TGG + chr7.1:15367113-15367132 MS.gene017912:intron 20.0%
!!! ATTAAAAATTTGAAGTGAAC+GGG - chr7.1:15364315-15364334 None:intergenic 20.0%
!!! ATTTGGGTTAAATATGTTTT+TGG - chr7.1:15364420-15364439 None:intergenic 20.0%
!!! ATTTTCCAATAATTTGTTTC+AGG + chr7.1:15365582-15365601 MS.gene017912:intron 20.0%
!!! ATTTTTAATGTCGATGATTA+TGG + chr7.1:15364326-15364345 MS.gene017912:CDS 20.0%
!!! CATTAAAAATTTGAAGTGAA+CGG - chr7.1:15364316-15364335 None:intergenic 20.0%
!!! TAGTTTTAATAAAACTACGA+TGG + chr7.1:15366713-15366732 MS.gene017912:intron 20.0%
!!! TGATTTTTTGTTGTTTATTC+AGG + chr7.1:15367354-15367373 MS.gene017912:intron 20.0%
!!! TTAACTAACTTTGTTTTTGT+AGG + chr7.1:15365219-15365238 MS.gene017912:intron 20.0%
!!! TTTGAAAAAAGCTACTTTTT+GGG - chr7.1:15364677-15364696 None:intergenic 20.0%
!!! TTTTCCAATAATTTGTTTCA+GGG + chr7.1:15365583-15365602 MS.gene017912:intron 20.0%
!!! TTTTGAAAAAAGCTACTTTT+TGG - chr7.1:15364678-15364697 None:intergenic 20.0%
! AAAAAAGCCATGTAAACAAA+TGG + chr7.1:15367255-15367274 MS.gene017912:CDS 25.0%
! AACATAGACTTGATATATGA+TGG + chr7.1:15367496-15367515 MS.gene017912:CDS 25.0%
! AACTAATAGTTGTTGAACTT+TGG - chr7.1:15364787-15364806 None:intergenic 25.0%
! AATATATAATGTAACTGACC+TGG - chr7.1:15364612-15364631 None:intergenic 25.0%
! ACAAATCCATATTTCATTTC+AGG + chr7.1:15365303-15365322 MS.gene017912:CDS 25.0%
! ATATTATACACAAAAGCAAG+GGG - chr7.1:15366521-15366540 None:intergenic 25.0%
! ATGACTATTATTTGACTGTT+CGG + chr7.1:15365124-15365143 MS.gene017912:intron 25.0%
! GATTGTATATCAATTGTAGA+TGG + chr7.1:15365609-15365628 MS.gene017912:CDS 25.0%
! GTTCAACAACTATTAGTTAA+TGG + chr7.1:15364789-15364808 MS.gene017912:CDS 25.0%
! TCATATTTACTCAAATAGGT+CGG + chr7.1:15365899-15365918 MS.gene017912:intron 25.0%
! TTTAAGAAAAAAGTCTAGTC+TGG + chr7.1:15366009-15366028 MS.gene017912:intron 25.0%
!! AACAAATGAAATGATGATGA+TGG - chr7.1:15364183-15364202 None:intergenic 25.0%
!! AGAAGCCTATTTAACTTAAA+AGG - chr7.1:15365967-15365986 None:intergenic 25.0%
!! TTTTCTTGTCACAGTAATTT+TGG - chr7.1:15367237-15367256 None:intergenic 25.0%
!!! ACTTCTTTAAGCTAGTTTTT+GGG + chr7.1:15366227-15366246 MS.gene017912:intron 25.0%
!!! ATAAATTTTCTTTGGTCTTG+CGG + chr7.1:15367121-15367140 MS.gene017912:intron 25.0%
!!! CTTGACCTTTTAAGTTAAAT+AGG + chr7.1:15365959-15365978 MS.gene017912:intron 25.0%
!!! TTTCCAATAATTTGTTTCAG+GGG + chr7.1:15365584-15365603 MS.gene017912:intron 25.0%
AAAAACCTCTTAGACCTATT+AGG - chr7.1:15365925-15365944 None:intergenic 30.0%
AATATAAAGGGGAGTAAGTT+AGG - chr7.1:15367084-15367103 None:intergenic 30.0%
ACTGATACATTAGATTTGCA+AGG - chr7.1:15364589-15364608 None:intergenic 30.0%
ATGGAGTTAGAATTAAGACT+TGG + chr7.1:15366467-15366486 MS.gene017912:CDS 30.0%
ATGTGGGATACATAATATTC+AGG + chr7.1:15364462-15364481 MS.gene017912:intron 30.0%
CAACAACTATTAGTTAATGG+TGG + chr7.1:15364792-15364811 MS.gene017912:CDS 30.0%
CAACGTATGTAGTAATAAGT+GGG - chr7.1:15364232-15364251 None:intergenic 30.0%
CACATTTCAGAACATTGAAA+TGG + chr7.1:15367183-15367202 MS.gene017912:CDS 30.0%
CCATATTTCATTTCAGGATT+CGG + chr7.1:15365309-15365328 MS.gene017912:CDS 30.0%
GAATATTATGTATCCCACAT+GGG - chr7.1:15364462-15364481 None:intergenic 30.0%
TATTATACACAAAAGCAAGG+GGG - chr7.1:15366520-15366539 None:intergenic 30.0%
TCAACGTATGTAGTAATAAG+TGG - chr7.1:15364233-15364252 None:intergenic 30.0%
TGAATATTATGTATCCCACA+TGG - chr7.1:15364463-15364482 None:intergenic 30.0%
TTGGTCAATTATTATAGGGT+TGG - chr7.1:15367218-15367237 None:intergenic 30.0%
! AAAACTAGCTTAAAGAAGTG+AGG - chr7.1:15366226-15366245 None:intergenic 30.0%
! AAACTAGCTTAAAGAAGTGA+GGG - chr7.1:15366225-15366244 None:intergenic 30.0%
! AGAGGAGTATGTTATGATTT+GGG - chr7.1:15364436-15364455 None:intergenic 30.0%
! ATATCTTAGTATTGGAAGCT+TGG + chr7.1:15366375-15366394 MS.gene017912:intron 30.0%
! CACTTTTACCTGTTATATTC+AGG - chr7.1:15367411-15367430 None:intergenic 30.0%
! GATTGAACTGTTTAGAATAC+GGG + chr7.1:15365146-15365165 MS.gene017912:intron 30.0%
! GGATTGAACTGTTTAGAATA+CGG + chr7.1:15365145-15365164 MS.gene017912:intron 30.0%
! TAGAGGAGTATGTTATGATT+TGG - chr7.1:15364437-15364456 None:intergenic 30.0%
! TATCTTAGTATTGGAAGCTT+GGG + chr7.1:15366376-15366395 MS.gene017912:intron 30.0%
!! AAGATTTCTGGAACTACAAA+TGG + chr7.1:15366448-15366467 MS.gene017912:CDS 30.0%
!! AGCTAGAGATTTTGATGTTT+TGG - chr7.1:15365414-15365433 None:intergenic 30.0%
!! GATTTTGATGTTTTGGGTAT+TGG - chr7.1:15365407-15365426 None:intergenic 30.0%
!! GCTAGAGATTTTGATGTTTT+GGG - chr7.1:15365413-15365432 None:intergenic 30.0%
!!! CACTTCTTTAAGCTAGTTTT+TGG + chr7.1:15366226-15366245 MS.gene017912:intron 30.0%
AAAATCCAGGGACATTGTTT+CGG + chr7.1:15366405-15366424 MS.gene017912:CDS 35.0%
AACATTGTTGCATATAGCCT+TGG - chr7.1:15367530-15367549 None:intergenic 35.0%
ACGACTGAGATTTGTCTAAA+CGG - chr7.1:15365075-15365094 None:intergenic 35.0%
AGTTAGAATTAAGACTTGGC+CGG + chr7.1:15366471-15366490 MS.gene017912:CDS 35.0%
ATTATACACAAAAGCAAGGG+GGG - chr7.1:15366519-15366538 None:intergenic 35.0%
CAAAGTAAATAGAGCAAAGC+TGG + chr7.1:15366926-15366945 MS.gene017912:intron 35.0%
CAAATCTAATGTATCAGTCC+AGG + chr7.1:15364591-15364610 MS.gene017912:CDS 35.0%
CAACTATTAGTTAATGGTGG+TGG + chr7.1:15364795-15364814 MS.gene017912:CDS 35.0%
CAGTAAGAAATTTCCATGCA+AGG + chr7.1:15367459-15367478 MS.gene017912:CDS 35.0%
CCGAATCCTGAAATGAAATA+TGG - chr7.1:15365312-15365331 None:intergenic 35.0%
GAACTATGTATACATACCGT+TGG - chr7.1:15365026-15365045 None:intergenic 35.0%
GCTGGAAAAAAAAAGTGAAG+AGG - chr7.1:15364989-15365008 None:intergenic 35.0%
GGTATGACACATTGCTAATT+TGG - chr7.1:15367390-15367409 None:intergenic 35.0%
GTGTCATACCTGAATATAAC+AGG + chr7.1:15367400-15367419 MS.gene017912:CDS 35.0%
TAATATTCAGGCATTCGAGA+AGG + chr7.1:15364474-15364493 MS.gene017912:intron 35.0%
TAGACGGAAAAGGAAACATA+TGG + chr7.1:15364823-15364842 MS.gene017912:CDS 35.0%
TCAGATTACAGTGAAGATCA+AGG + chr7.1:15364744-15364763 MS.gene017912:CDS 35.0%
TCGATGATTATGGAGCTAAA+GGG + chr7.1:15364336-15364355 MS.gene017912:CDS 35.0%
TGATAAGTCTAGTGCATGTT+TGG - chr7.1:15366771-15366790 None:intergenic 35.0%
TGATCTTCACTGTAATCTGA+TGG - chr7.1:15364744-15364763 None:intergenic 35.0%
TGTATGTTTCCTCCATCTAT+TGG - chr7.1:15366993-15367012 None:intergenic 35.0%
TTGATCAAGCAAAACACATG+TGG + chr7.1:15364284-15364303 MS.gene017912:CDS 35.0%
! AAAGTGAAGAGGCATAAGAT+TGG - chr7.1:15364978-15364997 None:intergenic 35.0%
! AAATTTGAAGTGAACGGGAA+AGG - chr7.1:15364310-15364329 None:intergenic 35.0%
! AACTTTTACAAACTCACGAC+CGG - chr7.1:15366659-15366678 None:intergenic 35.0%
! AATAGTGTTGGACCAATAGA+TGG + chr7.1:15366978-15366997 MS.gene017912:intron 35.0%
! ATATGTTTCCTTTTCCGTCT+AGG - chr7.1:15364824-15364843 None:intergenic 35.0%
! ATCTTAGTATTGGAAGCTTG+GGG + chr7.1:15366377-15366396 MS.gene017912:intron 35.0%
! TATGTTTCCTTTTCCGTCTA+GGG - chr7.1:15364823-15364842 None:intergenic 35.0%
! TCTGACGTTTGATAATTGCA+AGG + chr7.1:15365243-15365262 MS.gene017912:CDS 35.0%
! TTGTTAGTTTCACATCGCTT+AGG + chr7.1:15366163-15366182 MS.gene017912:intron 35.0%
!! ACTACATACGTTGATGATGA+TGG + chr7.1:15364239-15364258 MS.gene017912:CDS 35.0%
!!! GGTCTAAGAGGTTTTTTGAA+TGG + chr7.1:15365929-15365948 MS.gene017912:intron 35.0%
!!! TTTTTTTTTCCAGCCTTGCA+AGG + chr7.1:15364995-15365014 MS.gene017912:intron 35.0%
AAATCCAGGGACATTGTTTC+GGG + chr7.1:15366406-15366425 MS.gene017912:CDS 40.0%
ACAGTGAAGATCAAGGACAT+TGG + chr7.1:15364751-15364770 MS.gene017912:CDS 40.0%
ACATGAATTCCATCCGTGTT+AGG - chr7.1:15365382-15365401 None:intergenic 40.0%
ACGGAAAAGGAAACATATGG+TGG + chr7.1:15364826-15364845 MS.gene017912:CDS 40.0%
ATACTCCTCTATTCCCATGT+GGG + chr7.1:15364446-15364465 MS.gene017912:intron 40.0%
ATGAGAGGAGGAAATGTCTT+AGG - chr7.1:15364157-15364176 None:intergenic 40.0%
ATTTCAATGAGCCGCAGTTT+GGG - chr7.1:15367582-15367601 None:intergenic 40.0%
CATGGGTCAAATTCTCACTA+GGG - chr7.1:15366086-15366105 None:intergenic 40.0%
CGATGATTATGGAGCTAAAG+GGG + chr7.1:15364337-15364356 MS.gene017912:CDS 40.0%
CGTCCCCTGAAACAAATTAT+TGG - chr7.1:15365590-15365609 None:intergenic 40.0%
CTAGTGCATGTTTGGTATCT+TGG - chr7.1:15366763-15366782 None:intergenic 40.0%
CTCAAACCAATCAGATTCTC+TGG + chr7.1:15364562-15364581 MS.gene017912:CDS 40.0%
GAAAAAAGTCTAGTCTGGCT+TGG + chr7.1:15366014-15366033 MS.gene017912:intron 40.0%
GAAGCCACAAACATAACTTG+CGG + chr7.1:15365645-15365664 MS.gene017912:CDS 40.0%
GGAAGTAGTATGTTCTTCAG+GGG + chr7.1:15364501-15364520 MS.gene017912:CDS 40.0%
GGGAAGTAGTATGTTCTTCA+GGG + chr7.1:15364500-15364519 MS.gene017912:CDS 40.0%
GTCGATGATTATGGAGCTAA+AGG + chr7.1:15364335-15364354 MS.gene017912:CDS 40.0%
GTGAATGGAGCTAAGATTTC+TGG + chr7.1:15366436-15366455 MS.gene017912:CDS 40.0%
GTTGTTTATTCAGGACTCTG+CGG + chr7.1:15367363-15367382 MS.gene017912:intron 40.0%
TATTTCAATGAGCCGCAGTT+TGG - chr7.1:15367583-15367602 None:intergenic 40.0%
TCGGTTAATGTTACAGCTTC+TGG + chr7.1:15365328-15365347 MS.gene017912:CDS 40.0%
TGCATTTCTATCTCCTTGCA+TGG - chr7.1:15367475-15367494 None:intergenic 40.0%
TGGGAAGTAGTATGTTCTTC+AGG + chr7.1:15364499-15364518 MS.gene017912:CDS 40.0%
TTGCAATAGCAACTTGCAAG+AGG + chr7.1:15364205-15364224 MS.gene017912:CDS 40.0%
TTGTTGAAATCATGGTGAGC+CGG + chr7.1:15366637-15366656 MS.gene017912:intron 40.0%
! TCTTAGTATTGGAAGCTTGG+GGG + chr7.1:15366378-15366397 MS.gene017912:intron 40.0%
!! ACATACGTTGATGATGATGG+TGG + chr7.1:15364242-15364261 MS.gene017912:CDS 40.0%
!! GTTTCGGGAGTATTAGTGAA+TGG + chr7.1:15366421-15366440 MS.gene017912:CDS 40.0%
!! TGATGATGATGGTGAATGAG+AGG - chr7.1:15364172-15364191 None:intergenic 40.0%
!!! AATTTTCTTTGGTCTTGCGG+TGG + chr7.1:15367124-15367143 MS.gene017912:intron 40.0%
ACTAGGGATGAGAATAGACC+AGG - chr7.1:15366070-15366089 None:intergenic 45.0%
CAAGGACCAGAGAATCTGAT+TGG - chr7.1:15364571-15364590 None:intergenic 45.0%
CATACTCCTCTATTCCCATG+TGG + chr7.1:15364445-15364464 MS.gene017912:intron 45.0%
CTCAAATAGGTCGGCCTAAT+AGG + chr7.1:15365908-15365927 MS.gene017912:intron 45.0%
GATTATGGAGCTAAAGGGGA+TGG + chr7.1:15364341-15364360 MS.gene017912:CDS 45.0%
GCATGGGTCAAATTCTCACT+AGG - chr7.1:15366087-15366106 None:intergenic 45.0%
GGTGGCAAAACTCATGCAAA+AGG + chr7.1:15364844-15364863 MS.gene017912:CDS 45.0%
GTGCATGTTTGGTATCTTGG+TGG - chr7.1:15366760-15366779 None:intergenic 45.0%
TACAGCTTCTGGTCTCATTG+TGG + chr7.1:15365339-15365358 MS.gene017912:CDS 45.0%
TCTTGCGGTGGTTAAATGCA+GGG + chr7.1:15367136-15367155 MS.gene017912:intron 45.0%
TGGTCAAACTGATGACACAC+AGG + chr7.1:15364361-15364380 MS.gene017912:CDS 45.0%
TGGTCCGCAAGTTATGTTTG+TGG - chr7.1:15365652-15365671 None:intergenic 45.0%
TGTATCCCACATGGGAATAG+AGG - chr7.1:15364454-15364473 None:intergenic 45.0%
TTTCAATGAGCCGCAGTTTG+GGG - chr7.1:15367581-15367600 None:intergenic 45.0%
! ACAAACATAACTTGCGGACC+AGG + chr7.1:15365651-15365670 MS.gene017912:CDS 45.0%
! AGTGTTGGACCAATAGATGG+AGG + chr7.1:15366981-15367000 MS.gene017912:intron 45.0%
! ATATGATGGAGAACCAGCCA+AGG + chr7.1:15367510-15367529 MS.gene017912:CDS 45.0%
! TTGTTGCATATAGCCTTGGC+TGG - chr7.1:15367526-15367545 None:intergenic 45.0%
!! TGATGATGGTGAATGAGAGG+AGG - chr7.1:15364169-15364188 None:intergenic 45.0%
ACCGGAGGATAGTCCTAACA+CGG + chr7.1:15365366-15365385 MS.gene017912:CDS 50.0%
ATTTGACCCATGCTCACGCT+AGG + chr7.1:15366094-15366113 MS.gene017912:intron 50.0%
GAGGATAGTCCTAACACGGA+TGG + chr7.1:15365370-15365389 MS.gene017912:CDS 50.0%
GGTTAAATGCAGGGAGGTTC+AGG + chr7.1:15367145-15367164 MS.gene017912:intron 50.0%
GTCGGCCTAATAGGTCTAAG+AGG + chr7.1:15365917-15365936 MS.gene017912:intron 50.0%
GTCTTGCGGTGGTTAAATGC+AGG + chr7.1:15367135-15367154 MS.gene017912:intron 50.0%
TACTCCCGAAACAATGTCCC+TGG - chr7.1:15366413-15366432 None:intergenic 50.0%
TAGTTCGCTACCTGATGCCA+TGG - chr7.1:15365677-15365696 None:intergenic 50.0%
TCAGGCATTCGAGAAGGCTT+GGG + chr7.1:15364480-15364499 MS.gene017912:intron 50.0%
TCCGTGTTAGGACTATCCTC+CGG - chr7.1:15365370-15365389 None:intergenic 50.0%
TGGTCTCATTGTGGCATCAC+CGG + chr7.1:15365348-15365367 MS.gene017912:CDS 50.0%
TTCAGGCATTCGAGAAGGCT+TGG + chr7.1:15364479-15364498 MS.gene017912:intron 50.0%
!! AATGGTGGTGGAACCCTAGA+CGG + chr7.1:15364807-15364826 MS.gene017912:CDS 50.0%
CTTGGGGGCTGGAAAATCCA+GGG + chr7.1:15366393-15366412 MS.gene017912:CDS 55.0%
GCCTTGCAAGGATGCTCCAA+CGG + chr7.1:15365007-15365026 MS.gene017912:intron 55.0%
GGGATGAGAATAGACCAGGC+CGG - chr7.1:15366066-15366085 None:intergenic 55.0%
GGTGGAACCCTAGACGGAAA+AGG + chr7.1:15364813-15364832 MS.gene017912:CDS 55.0%
GTACAAGCTGCCCCAAACTG+CGG + chr7.1:15367568-15367587 MS.gene017912:CDS 55.0%
TCTCATTGTGGCATCACCGG+AGG + chr7.1:15365351-15365370 MS.gene017912:CDS 55.0%
TGCGGTGGTTAAATGCAGGG+AGG + chr7.1:15367139-15367158 MS.gene017912:intron 55.0%
! ACCGTTGGAGCATCCTTGCA+AGG - chr7.1:15365011-15365030 None:intergenic 55.0%
! AGTATTGGAAGCTTGGGGGC+TGG + chr7.1:15366382-15366401 MS.gene017912:intron 55.0%
! ATAACTTGCGGACCAGGCCA+TGG + chr7.1:15365657-15365676 MS.gene017912:CDS 55.0%
! TTGGAGCATCCTTGCAAGGC+TGG - chr7.1:15365007-15365026 None:intergenic 55.0%
!! AGTCTGGCTTGGTCTGTCGT+AGG + chr7.1:15366025-15366044 MS.gene017912:intron 55.0%
!! TCTAGCTCTATCGCAGCAGC+TGG + chr7.1:15365427-15365446 MS.gene017912:CDS 55.0%
CATGCTCACGCTAGGCGTGA+GGG + chr7.1:15366102-15366121 MS.gene017912:intron 60.0%
CTCACGCCTAGCGTGAGCAT+GGG - chr7.1:15366103-15366122 None:intergenic 60.0%
GCTTGGGGGCTGGAAAATCC+AGG + chr7.1:15366392-15366411 MS.gene017912:CDS 60.0%
GTCGTAGGCTAGGCCTCTGT+AGG + chr7.1:15366040-15366059 MS.gene017912:intron 60.0%
TAGGCTAGGCCTCTGTAGGC+CGG + chr7.1:15366044-15366063 MS.gene017912:intron 60.0%
! GGCTTGGTCTGTCGTAGGCT+AGG + chr7.1:15366030-15366049 MS.gene017912:intron 60.0%
CCATGCTCACGCTAGGCGTG+AGG + chr7.1:15366101-15366120 MS.gene017912:intron 65.0%
CCTCACGCCTAGCGTGAGCA+TGG - chr7.1:15366104-15366123 None:intergenic 65.0%
CGCTACCTGATGCCATGGCC+TGG - chr7.1:15365672-15365691 None:intergenic 65.0%
CTCACGCTAGGCGTGAGGGT+GGG + chr7.1:15366106-15366125 MS.gene017912:intron 65.0%
TAGACCAGGCCGGCCTACAG+AGG - chr7.1:15366056-15366075 None:intergenic 65.0%
GCGGACCAGGCCATGGCATC+AGG + chr7.1:15365664-15365683 MS.gene017912:CDS 70.0%
GCTCACGCTAGGCGTGAGGG+TGG + chr7.1:15366105-15366124 MS.gene017912:intron 70.0%
TAGGCCTCTGTAGGCCGGCC+TGG + chr7.1:15366049-15366068 MS.gene017912:intron 70.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 15364146 15367612 15364146 ID=MS.gene017912
chr7.1 mRNA 15364146 15367612 15364146 ID=MS.gene017912.t1;Parent=MS.gene017912
chr7.1 exon 15364146 15364382 15364146 ID=MS.gene017912.t1.exon1;Parent=MS.gene017912.t1
chr7.1 CDS 15364146 15364382 15364146 ID=cds.MS.gene017912.t1;Parent=MS.gene017912.t1
chr7.1 exon 15364484 15364612 15364484 ID=MS.gene017912.t1.exon2;Parent=MS.gene017912.t1
chr7.1 CDS 15364484 15364612 15364484 ID=cds.MS.gene017912.t1;Parent=MS.gene017912.t1
chr7.1 exon 15364711 15364878 15364711 ID=MS.gene017912.t1.exon3;Parent=MS.gene017912.t1
chr7.1 CDS 15364711 15364878 15364711 ID=cds.MS.gene017912.t1;Parent=MS.gene017912.t1
chr7.1 exon 15365008 15365028 15365008 ID=MS.gene017912.t1.exon4;Parent=MS.gene017912.t1
chr7.1 CDS 15365008 15365028 15365008 ID=cds.MS.gene017912.t1;Parent=MS.gene017912.t1
chr7.1 exon 15365241 15365448 15365241 ID=MS.gene017912.t1.exon5;Parent=MS.gene017912.t1
chr7.1 CDS 15365241 15365448 15365241 ID=cds.MS.gene017912.t1;Parent=MS.gene017912.t1
chr7.1 exon 15365604 15365685 15365604 ID=MS.gene017912.t1.exon6;Parent=MS.gene017912.t1
chr7.1 CDS 15365604 15365685 15365604 ID=cds.MS.gene017912.t1;Parent=MS.gene017912.t1
chr7.1 exon 15366384 15366492 15366384 ID=MS.gene017912.t1.exon7;Parent=MS.gene017912.t1
chr7.1 CDS 15366384 15366492 15366384 ID=cds.MS.gene017912.t1;Parent=MS.gene017912.t1
chr7.1 exon 15367157 15367276 15367157 ID=MS.gene017912.t1.exon8;Parent=MS.gene017912.t1
chr7.1 CDS 15367157 15367276 15367157 ID=cds.MS.gene017912.t1;Parent=MS.gene017912.t1
chr7.1 exon 15367376 15367612 15367376 ID=MS.gene017912.t1.exon9;Parent=MS.gene017912.t1
chr7.1 CDS 15367376 15367612 15367376 ID=cds.MS.gene017912.t1;Parent=MS.gene017912.t1
Gene Sequence

>MS.gene017912

ATGGCTCTCCTAAGACATTTCCTCCTCTCATTCACCATCATCATCATTTCATTTGTTGCTTGCAATAGCAACTTGCAAGAGGACCCACTTATTACTACATACGTTGATGATGATGGTGGTACATTATCATTCAAGAATTTGATCAAGCAAAACACATGTGGCCTTTCCCGTTCACTTCAAATTTTTAATGTCGATGATTATGGAGCTAAAGGGGATGGTCAAACTGATGACACACAGGTATACATAATAACACACTAATCATATATAGATACCAAAAACATATTTAACCCAAATCATAACATACTCCTCTATTCCCATGTGGGATACATAATATTCAGGCATTCGAGAAGGCTTGGGAAGTAGTATGTTCTTCAGGGGAAGCAGTTTTTGTTGCACCTCAAGATAATATTTATCTACTCAAACCAATCAGATTCTCTGGTCCTTGCAAATCTAATGTATCAGTCCAGGTCAGTTACATTATATATTAAGCCAGTGATTAATTAACTATTTAGTTCTTCATATTTTAAGCCCAAAAAGTAGCTTTTTTCAAAAATTTAATTGACAGATATCTGGAATTCTCATAGCATCAAATAATCCATCAGATTACAGTGAAGATCAAGGACATTGGCTTGTATTTGCCAAAGTTCAACAACTATTAGTTAATGGTGGTGGAACCCTAGACGGAAAAGGAAACATATGGTGGCAAAACTCATGCAAAAGGAACAAAAAGAAAGTAAGATATCAAAAATAACGTCCCAATATTTTTTAATCAAGTCAATTATATGCATCAATGAATCTATATAATTAATCATATTCAAATTAATTATGACCAATCTTATGCCTCTTCACTTTTTTTTTCCAGCCTTGCAAGGATGCTCCAACGGTATGTATACATAGTTCTGCCTAAATTTTCTCATCAATTTAGTCCGTTTAGACAAATCTCAGTCGTTGAATTTAAATTGAACATTGATTTAATTAATGACTATTATTTGACTGTTCGGATTGAACTGTTTAGAATACGGGCTTACAACTTTCATAATGAAAGATATTAATTGGATTGAAATACGTGTTAATTAACTAACTTTGTTTTTGTAGGCTCTGACGTTTGATAATTGCAAGGACTTGATAGTTGAGAATTTGAAGATACGAAATGCGCAACAAATCCATATTTCATTTCAGGATTCGGTTAATGTTACAGCTTCTGGTCTCATTGTGGCATCACCGGAGGATAGTCCTAACACGGATGGAATTCATGTCACCAATACCCAAAACATCAAAATCTCTAGCTCTATCGCAGCAGCTGGTACATTCATGATTTAATATCTAAAAAAATTGAAACAAAAAAATTACAAGAATTAGGAATGAAAAATTGAAAATTCATATGTTTTTTAGACAAATAAAAATTTATATATGTATACTCACAATTACTTAATTTGATTTTCCAATAATTTGTTTCAGGGGACGATTGTATATCAATTGTAGATGGATCTAGAAATGTAGAAGCCACAAACATAACTTGCGGACCAGGCCATGGCATCAGGTAGCGAACTAATAGATCAATTAAAATCAACATGAGTTTTTAGAGAATTTGACTATATATTGTATCATATTTCAATTCTAGTTTATAACAATACATTTAAATATGCAAAAAAAAAAATTAATGTATACTAATAAGTTTAAATTCCTGAAAAAGTTAACAATTTTTTATTTTAATTTTAAGTACAAAATAAAATATAATAATAACTAATATTATTCATATTTACTCAAATAGGTCGGCCTAATAGGTCTAAGAGGTTTTTTGAATGGCATATGACTTGACCTTTTAAGTTAAATAGGCTTCTGACAAAGCCTAATCATTATCTATTTAAGAAAAAAGTCTAGTCTGGCTTGGTCTGTCGTAGGCTAGGCCTCTGTAGGCCGGCCTGGTCTATTCTCATCCCTAGTGAGAATTTGACCCATGCTCACGCTAGGCGTGAGGGTGGGTGTTGAAGTTTATTTTGAAGTTGTTTGTAGTTTGTTGTTAGTTTCACATCGCTTAGGTTTCCGAATTGTTGAATGTATAAATATGCTTGAATACCCTCACTTCTTTAAGCTAGTTTTTGGGATGAGATCCAAGTTTTTTTTTTTTTTTGAAGGAAGCTTATTTAACATTCTTTTTGTAGTTAATATATCAGTTTTATTATATTGTATTATTTGAATGTGAATTTTATTTTATTTGCAATGATTTATATATCTTAGTATTGGAAGCTTGGGGGCTGGAAAATCCAGGGACATTGTTTCGGGAGTATTAGTGAATGGAGCTAAGATTTCTGGAACTACAAATGGAGTTAGAATTAAGACTTGGCCGGTAATATCAAATTTTAATTTAATCCCCCCTTGCTTTTGTGTATAATATATGCTCAAGTGATTTGTTAAAAATAAAAAAAATGCTCAAGAGATGATCTGCAGAATGCAATAATTCGTAACAATTTCGATAGCCTGATTAACTTAATTGTTGAAATCATGGTGAGCCGGTCGTGAGTTTGTAAAAGTTATTATGTGTAGCTTTTACAACAAATAAAAGAGTGTAGTTTTAATAAAACTACGATGGTTCGATTTAATTTCAACAAATCCACCAAGATACCAAACATGCACTAGACTTATCAAGATTGAATTAATCAAGTTCAGTTTTGCAATTTATTGTCAATTTATAAGAGAGATACAGTGATAGTTTAATGTGATCCACTAAATCAATAAAATATTTCTGAGTTATGACTCTTATAAATTGACGATAAGTGAAGCAAAGTAAATAGAGCAAAGCTGGAGTCTAATTAAACACCAATTAAACACAATAATAGTGTTGGACCAATAGATGGAGGAAACATACACTACATACATTTTGAAAGCATGAAATGAAAGTAAGATTATGAAAATTGAATTCTTTATTGATCATAGGCCTAACTTACTCCCCTTTATATTTAATAATCAACTAAGACATAAATTTTCTTTGGTCTTGCGGTGGTTAAATGCAGGGAGGTTCAGGAAGTGCTAGCAACATCACATTTCAGAACATTGAAATGGACAATGTGACCAACCCTATAATAATTGACCAAAATTACTGTGACAAGAAAAAAAAGCCATGTAAACAAATGGTAAATTATTTTTCACAATTCTTGCTATATACACTACAAGTAGACTACTTATTTATTTATTTATTTATTTATTTTTATGATTTTTTGTTGTTTATTCAGGACTCTGCGGTCCAAATTAGCAATGTGTCATACCTGAATATAACAGGTAAAAGTGCTTCTGATGTAGCAGTGAAGTTTGATTGCAGTAAGAAATTTCCATGCAAGGAGATAGAAATGCAGAACATAGACTTGATATATGATGGAGAACCAGCCAAGGCTATATGCAACAATGTTCAGTTGTCTTCTTACACAGTACAAGCTGCCCCAAACTGCGGCTCATTGAAATATACAAATTAA
Protein sequence

>MS.gene017912.t1

MALLRHFLLSFTIIIISFVACNSNLQEDPLITTYVDDDGGTLSFKNLIKQNTCGLSRSLQIFNVDDYGAKGDGQTDDTQAFEKAWEVVCSSGEAVFVAPQDNIYLLKPIRFSGPCKSNVSVQISGILIASNNPSDYSEDQGHWLVFAKVQQLLVNGGGTLDGKGNIWWQNSCKRNKKKPCKDAPTALTFDNCKDLIVENLKIRNAQQIHISFQDSVNVTASGLIVASPEDSPNTDGIHVTNTQNIKISSSIAAAGDDCISIVDGSRNVEATNITCGPGHGISIGSLGAGKSRDIVSGVLVNGAKISGTTNGVRIKTWPGGSGSASNITFQNIEMDNVTNPIIIDQNYCDKKKKPCKQMDSAVQISNVSYLNITGKSASDVAVKFDCSKKFPCKEIEMQNIDLIYDGEPAKAICNNVQLSSYTVQAAPNCGSLKYTN