AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene072323

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072323.t1 MTR_7g091850 94.831 445 22 1 1 444 1 445 0.0 820
MS.gene072323.t1 MTR_7g091840 77.083 384 76 3 1 382 1 374 0.0 576
MS.gene072323.t1 MTR_1g052315 64.908 436 143 7 13 443 1 431 0.0 555
MS.gene072323.t1 MTR_2g060350 48.444 450 215 7 1 442 1 441 3.27e-140 409
MS.gene072323.t1 MTR_3g030540 50.112 445 204 5 5 443 4 436 2.75e-136 399
MS.gene072323.t1 MTR_2g103410 48.509 369 187 3 74 440 58 425 3.24e-119 355
MS.gene072323.t1 MTR_8g065030 45.924 368 196 3 74 440 64 429 7.04e-118 352
MS.gene072323.t1 MTR_6g005630 44.536 366 185 6 60 415 21 378 3.63e-100 306
MS.gene072323.t1 MTR_4g094715 43.575 358 189 6 74 421 64 418 5.22e-94 291
MS.gene072323.t1 MTR_2g435640 40.800 375 209 8 73 440 51 419 1.48e-91 284
MS.gene072323.t1 MTR_1g086390 41.111 360 197 6 74 421 80 436 4.79e-91 284
MS.gene072323.t1 MTR_5g034090 40.650 369 189 5 74 415 120 485 2.78e-88 279
MS.gene072323.t1 MTR_4g083660 43.386 378 204 9 67 441 1 371 2.90e-87 271
MS.gene072323.t1 MTR_7g110050 39.833 359 202 6 74 421 66 421 8.88e-87 273
MS.gene072323.t1 MTR_6g005630 41.530 366 173 8 60 415 21 355 1.25e-85 268
MS.gene072323.t1 MTR_7g113910 41.176 374 143 6 69 440 51 349 2.31e-84 263
MS.gene072323.t1 MTR_2g103410 49.421 259 129 2 74 330 58 316 1.14e-83 260
MS.gene072323.t1 MTR_2g103650 41.329 346 195 6 76 415 29 372 2.77e-83 262
MS.gene072323.t1 MTR_4g084050 39.837 369 202 6 76 433 24 383 6.60e-83 260
MS.gene072323.t1 MTR_2g049400 40.811 370 207 7 75 441 28 388 2.08e-82 259
MS.gene072323.t1 MTR_8g065010 38.275 371 192 5 76 415 108 472 7.59e-82 261
MS.gene072323.t1 MTR_5g033680 39.884 346 199 4 76 415 60 402 1.33e-81 259
MS.gene072323.t1 MTR_2g032710 41.341 358 197 5 74 421 66 420 3.92e-81 258
MS.gene072323.t1 MTR_3g054320 40.548 365 192 7 76 431 31 379 6.61e-81 255
MS.gene072323.t1 MTR_3g438050 40.369 379 211 10 69 440 21 391 1.48e-80 254
MS.gene072323.t1 MTR_1g088160 36.829 391 224 10 66 440 19 402 2.70e-80 254
MS.gene072323.t1 MTR_8g030930 42.165 351 188 8 73 415 25 368 3.66e-80 253
MS.gene072323.t1 MTR_5g043350 39.362 376 214 5 62 431 16 383 1.87e-78 249
MS.gene072323.t1 MTR_4g120320 39.362 376 213 10 73 440 50 418 3.71e-78 249
MS.gene072323.t1 MTR_8g010080 40.884 362 192 8 74 431 30 373 4.84e-78 248
MS.gene072323.t1 MTR_3g084360 39.237 367 208 6 73 433 22 379 5.51e-78 248
MS.gene072323.t1 MTR_1g012390 40.496 363 199 9 76 431 29 381 6.14e-78 248
MS.gene072323.t1 MTR_3g084380 39.840 374 204 8 65 427 7 370 2.02e-77 246
MS.gene072323.t1 MTR_6g028080 39.891 366 196 8 76 430 31 383 2.42e-77 246
MS.gene072323.t1 MTR_8g010070 40.659 364 192 11 74 431 30 375 8.69e-76 242
MS.gene072323.t1 MTR_8g010090 39.394 363 197 10 74 431 30 374 1.93e-75 241
MS.gene072323.t1 MTR_0157s0060 39.944 358 198 5 79 431 2 347 2.27e-75 240
MS.gene072323.t1 MTR_4g034020 39.944 358 198 5 79 431 2 347 2.27e-75 240
MS.gene072323.t1 MTR_8g010110 39.779 362 197 9 74 431 30 374 4.58e-75 240
MS.gene072323.t1 MTR_7g035415 42.208 308 161 6 62 363 27 323 1.12e-73 234
MS.gene072323.t1 MTR_8g009810 39.353 371 215 9 73 440 33 396 6.82e-73 234
MS.gene072323.t1 MTR_8g008765 40.122 329 178 5 74 399 30 342 1.59e-71 229
MS.gene072323.t1 MTR_8g010040 38.544 371 204 9 76 441 33 384 2.34e-70 228
MS.gene072323.t1 MTR_2g058640 36.243 378 226 9 74 444 24 393 1.61e-69 226
MS.gene072323.t1 MTR_5g034090 41.901 284 138 3 74 330 120 403 1.48e-68 224
MS.gene072323.t1 MTR_1g013740 35.040 371 216 8 75 441 35 384 1.21e-66 218
MS.gene072323.t1 MTR_2g029170 40.909 330 181 10 117 441 38 358 1.31e-66 217
MS.gene072323.t1 MTR_1g013730 36.288 361 205 8 75 431 27 366 5.49e-65 214
MS.gene072323.t1 MTR_5g097860 36.957 322 194 6 74 391 24 340 2.63e-64 211
MS.gene072323.t1 MTR_2g058840 33.071 381 232 9 74 444 24 391 6.91e-64 212
MS.gene072323.t1 MTR_2g058670 32.895 380 236 8 74 444 24 393 1.66e-63 211
MS.gene072323.t1 MTR_5g063430 37.124 299 173 7 68 361 18 306 3.08e-61 202
MS.gene072323.t1 MTR_8g010050 35.616 365 175 10 74 431 30 341 3.83e-60 200
MS.gene072323.t1 MTR_8g077320 36.198 384 174 10 74 441 32 360 1.96e-59 199
MS.gene072323.t1 MTR_8g008700 39.852 271 145 4 134 402 14 268 7.52e-54 182
MS.gene072323.t1 MTR_8g031180 45.078 193 98 2 217 403 73 263 6.38e-48 166
MS.gene072323.t1 MTR_2g100040 29.483 329 175 8 91 413 39 316 8.41e-41 149
MS.gene072323.t1 MTR_4g124980 24.934 381 226 14 74 413 73 434 9.19e-21 95.1
MS.gene072323.t1 MTR_2g042740 23.601 411 250 15 74 441 55 444 3.17e-18 87.0
MS.gene072323.t1 MTR_5g090160 24.771 327 193 13 75 363 44 355 6.47e-18 86.3
MS.gene072323.t1 MTR_2g435340 24.939 409 243 14 75 441 37 423 2.19e-17 84.3
MS.gene072323.t1 MTR_3g096330 25.298 336 164 12 74 354 75 378 2.58e-16 82.0
MS.gene072323.t1 MTR_7g078680 23.516 455 258 18 46 443 24 445 7.91e-16 79.7
MS.gene072323.t1 MTR_2g435340 24.110 365 225 11 116 441 7 358 1.44e-15 78.6
MS.gene072323.t1 MTR_1g100050 24.533 375 232 14 77 415 52 411 3.23e-15 77.8
MS.gene072323.t1 MTR_4g120730 23.350 394 247 12 75 430 40 416 3.89e-15 77.8
MS.gene072323.t1 MTR_1g086030 26.934 349 205 13 75 385 82 418 7.98e-15 77.0
MS.gene072323.t1 MTR_8g098840 23.467 375 238 14 76 415 45 405 7.98e-15 76.6
MS.gene072323.t1 MTR_7g110710 26.108 406 229 20 75 424 43 433 1.26e-14 76.3
MS.gene072323.t1 MTR_7g110710 26.108 406 229 20 75 424 43 433 1.62e-14 75.9
MS.gene072323.t1 MTR_8g028725 23.558 416 241 14 75 441 55 442 2.06e-14 75.5
MS.gene072323.t1 MTR_7g088550 23.472 409 257 16 47 419 28 416 2.58e-14 75.1
MS.gene072323.t1 MTR_1g100040 25.140 358 217 13 77 398 58 400 2.64e-14 75.1
MS.gene072323.t1 MTR_1g100060 23.733 375 235 12 77 415 95 454 6.07e-14 73.9
MS.gene072323.t1 MTR_3g449590 24.590 305 192 11 75 349 47 343 1.58e-13 72.8
MS.gene072323.t1 MTR_1g086030 29.798 198 120 4 165 350 85 275 9.66e-13 70.1
MS.gene072323.t1 MTR_1g099850 23.762 404 242 16 53 415 38 416 7.30e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072323.t1 AT3G07970 51.339 448 198 10 1 442 5 438 2.10e-146 424
MS.gene072323.t1 AT3G57510 49.103 446 207 8 1 442 1 430 1.97e-142 414
MS.gene072323.t1 AT2G41850 57.143 378 151 5 70 444 63 432 1.56e-139 407
MS.gene072323.t1 AT1G80170 46.524 374 196 4 70 440 48 420 5.57e-117 350
MS.gene072323.t1 AT1G70500 41.928 446 242 7 3 443 1 434 1.19e-116 350
MS.gene072323.t1 AT1G23460 47.011 368 192 3 74 440 42 407 8.61e-116 346
MS.gene072323.t1 AT1G23460 47.011 368 192 3 74 440 66 431 1.04e-115 347
MS.gene072323.t1 AT5G14650 43.567 342 186 5 75 415 51 386 1.50e-92 286
MS.gene072323.t1 AT1G02460 42.700 363 190 7 74 421 88 447 2.07e-91 285
MS.gene072323.t1 AT1G56710 41.667 360 195 6 74 421 47 403 1.21e-90 282
MS.gene072323.t1 AT1G10640 41.622 370 186 5 73 415 117 483 1.73e-90 284
MS.gene072323.t1 AT1G60590 40.541 370 187 5 76 415 124 490 2.38e-89 281
MS.gene072323.t1 AT2G43890 40.379 369 208 8 76 441 30 389 1.63e-86 270
MS.gene072323.t1 AT4G18180 38.945 398 216 11 67 443 31 422 2.71e-86 270
MS.gene072323.t1 AT3G15720 40.872 367 201 6 75 435 23 379 3.86e-86 271
MS.gene072323.t1 AT3G15720 40.872 367 201 6 75 435 24 380 4.28e-86 271
MS.gene072323.t1 AT1G48100 40.223 358 201 5 74 421 79 433 7.41e-86 271
MS.gene072323.t1 AT1G80170 47.909 263 135 2 70 330 48 310 8.07e-86 266
MS.gene072323.t1 AT4G01890 40.921 369 194 9 63 416 59 418 1.33e-85 270
MS.gene072323.t1 AT3G26610 42.663 368 195 6 74 429 66 429 3.36e-85 269
MS.gene072323.t1 AT1G05660 39.623 371 211 8 74 440 27 388 7.18e-85 265
MS.gene072323.t1 AT1G05650 39.153 378 217 8 67 440 20 388 2.20e-84 264
MS.gene072323.t1 AT2G43860 42.667 375 197 10 60 429 22 383 7.48e-84 263
MS.gene072323.t1 AT5G44840 38.950 362 209 5 73 430 22 375 2.68e-83 261
MS.gene072323.t1 AT3G15720 40.054 367 201 6 75 435 23 376 4.11e-83 263
MS.gene072323.t1 AT2G33160 40.800 375 210 8 73 440 30 399 8.21e-83 268
MS.gene072323.t1 AT2G43880 38.196 377 221 8 68 441 24 391 1.10e-82 260
MS.gene072323.t1 AT1G78400 38.874 373 217 7 73 440 33 399 1.65e-82 260
MS.gene072323.t1 AT5G27530 41.322 363 192 5 73 431 51 396 3.06e-82 261
MS.gene072323.t1 AT1G17150 40.519 385 212 11 68 442 23 400 3.61e-82 259
MS.gene072323.t1 AT4G35670 41.783 359 196 5 76 430 25 374 5.27e-82 258
MS.gene072323.t1 AT2G43870 38.845 381 218 10 67 442 13 383 5.40e-81 255
MS.gene072323.t1 AT5G17200 38.642 383 202 6 74 433 38 410 6.38e-81 256
MS.gene072323.t1 AT3G59850 40.270 370 207 10 76 440 24 384 1.60e-79 251
MS.gene072323.t1 AT3G59850 40.270 370 207 10 76 440 68 428 1.94e-79 253
MS.gene072323.t1 AT1G02790 38.120 383 210 11 74 442 51 420 5.77e-78 249
MS.gene072323.t1 AT1G43080 37.895 380 217 10 73 441 29 400 5.69e-77 245
MS.gene072323.t1 AT2G15460 37.789 389 220 11 67 441 20 400 3.58e-76 243
MS.gene072323.t1 AT1G43090 37.867 375 214 10 73 436 29 395 6.39e-76 244
MS.gene072323.t1 AT4G13760 37.368 380 219 10 73 441 29 400 1.73e-75 241
MS.gene072323.t1 AT4G32380 38.150 346 201 6 74 413 25 363 2.21e-75 243
MS.gene072323.t1 AT1G43100 37.600 375 215 10 73 436 29 395 5.28e-75 241
MS.gene072323.t1 AT2G15450 38.827 358 201 9 67 413 20 370 1.21e-74 239
MS.gene072323.t1 AT3G07840 35.561 374 223 7 76 441 22 385 1.85e-73 236
MS.gene072323.t1 AT2G40310 36.675 379 223 9 73 441 29 400 2.66e-73 236
MS.gene072323.t1 AT2G15470 38.268 358 203 9 67 413 20 370 1.09e-72 234
MS.gene072323.t1 AT1G65570 38.710 372 213 11 75 440 31 393 9.10e-72 232
MS.gene072323.t1 AT3G15720 39.815 324 180 5 117 435 3 316 2.54e-71 230
MS.gene072323.t1 AT3G07830 36.813 364 215 9 88 444 34 389 8.84e-71 229
MS.gene072323.t1 AT3G14040 38.338 373 214 10 75 440 71 434 1.77e-70 230
MS.gene072323.t1 AT2G26620 36.951 387 224 11 67 441 20 398 1.37e-69 226
MS.gene072323.t1 AT5G44830 38.024 334 185 5 101 430 1 316 2.51e-69 223
MS.gene072323.t1 AT3G07850 38.070 373 215 10 75 440 70 433 3.24e-69 226
MS.gene072323.t1 AT3G07820 36.212 359 217 7 88 441 33 384 4.09e-69 224
MS.gene072323.t1 AT2G43880 38.217 314 184 6 68 378 24 330 5.58e-69 222
MS.gene072323.t1 AT5G48140 35.733 375 220 8 76 441 22 384 1.43e-68 223
MS.gene072323.t1 AT5G14650 43.191 257 142 3 75 330 51 304 1.57e-68 221
MS.gene072323.t1 AT1G80140 37.798 336 194 7 111 440 6 332 1.84e-68 221
MS.gene072323.t1 AT4G32370 41.967 305 158 9 73 366 32 328 1.06e-66 217
MS.gene072323.t1 AT4G32375 39.927 273 156 2 156 427 13 278 1.63e-61 206
MS.gene072323.t1 AT4G32380 34.203 345 175 6 74 413 25 322 2.04e-61 205
MS.gene072323.t1 AT4G35670 42.182 275 150 2 156 430 2 267 4.25e-61 201
MS.gene072323.t1 AT5G39910 36.184 304 167 6 74 371 35 317 7.67e-59 197
MS.gene072323.t1 AT1G19170 24.155 414 245 16 74 441 86 476 5.33e-21 95.9
MS.gene072323.t1 AT3G42950 24.510 408 248 15 74 440 65 453 3.01e-19 90.5
MS.gene072323.t1 AT4G23820 26.733 303 186 9 75 348 41 336 3.93e-17 83.6
MS.gene072323.t1 AT3G62110 27.184 412 239 21 75 444 43 435 4.56e-17 83.6
MS.gene072323.t1 AT3G62110 27.184 412 239 21 75 444 43 435 4.56e-17 83.6
MS.gene072323.t1 AT5G49215 26.531 392 224 14 75 423 43 413 4.86e-17 83.6
MS.gene072323.t1 AT5G49215 26.531 392 224 14 75 423 41 411 4.86e-17 83.6
MS.gene072323.t1 AT4G33440 23.892 406 209 14 74 408 71 447 1.02e-16 82.8
MS.gene072323.t1 AT3G06770 25.722 381 220 13 75 413 44 403 2.58e-16 81.3
MS.gene072323.t1 AT3G06770 25.722 381 220 13 75 413 43 402 2.59e-16 81.3
MS.gene072323.t1 AT5G41870 25.466 322 201 11 73 363 43 356 7.39e-15 76.6
MS.gene072323.t1 AT2G23900 24.505 404 249 17 77 441 58 444 2.23e-14 75.5
MS.gene072323.t1 AT4G23500 24.265 408 246 18 76 441 69 455 2.99e-13 72.0
MS.gene072323.t1 AT3G61490 23.250 400 260 14 76 441 61 447 4.58e-13 71.2
MS.gene072323.t1 AT3G61490 23.250 400 260 14 76 441 46 432 5.87e-13 70.9
MS.gene072323.t1 AT3G61490 23.250 400 260 14 76 441 46 432 5.87e-13 70.9
MS.gene072323.t1 AT3G61490 23.250 400 260 14 76 441 46 432 5.87e-13 70.9
MS.gene072323.t1 AT3G61490 23.250 400 260 14 76 441 159 545 7.07e-13 70.9
MS.gene072323.t1 AT3G06770 26.022 269 172 8 161 413 58 315 1.44e-12 69.3
MS.gene072323.t1 AT3G06770 26.022 269 172 8 161 413 76 333 2.59e-12 68.6
MS.gene072323.t1 AT3G06770 26.022 269 172 8 161 413 76 333 2.59e-12 68.6

Find 90 sgRNAs with CRISPR-Local

Find 182 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTACAACACATTGCTAATT+TGG 0.092906 7.2:-17136726 None:intergenic
GTGAATGGAGCTAAGATTTC+TGG 0.145479 7.2:+17135773 MS.gene072323:CDS
GTAATTCTGGTTGATTATTA+TGG 0.171350 7.2:-17136537 None:intergenic
TCGATTAATGTTAAAGCTTC+TGG 0.232871 7.2:+17135256 MS.gene072323:CDS
TGGGAAGTAGTATGTGATTC+AGG 0.267912 7.2:+17134455 MS.gene072323:CDS
AAATTTAATTGTCAGATATC+TGG 0.291470 7.2:+17134678 MS.gene072323:intron
GTTCAGCAACTATTAGTTAA+TGG 0.294863 7.2:+17134771 MS.gene072323:CDS
AAATCCAGGGACATTGTTTC+GGG 0.300030 7.2:+17135743 MS.gene072323:CDS
TAATTCTGGTTGATTATTAT+GGG 0.314464 7.2:-17136536 None:intergenic
ATTGTTAATGTCAAAGATTA+TGG 0.321747 7.2:+17134079 MS.gene072323:CDS
GGTTAAATGCAGGGAGGTTC+AGG 0.324538 7.2:+17136461 MS.gene072323:intron
AAAATCCAGGGACATTGTTT+CGG 0.353625 7.2:+17135742 MS.gene072323:CDS
CAAATCTAACATATCAGTTC+AGG 0.357768 7.2:+17134547 MS.gene072323:CDS
ATGAGAGGAGGAATTGTCTT+AGG 0.383327 7.2:-17133868 None:intergenic
TATCTCAGTATTGGAAGCTT+GGG 0.384966 7.2:+17135713 MS.gene072323:intron
CAAATTTCAGAACATTGAAA+TGG 0.394222 7.2:+17136499 MS.gene072323:CDS
ACAAATCCACCTTTCATTCC+AGG 0.397276 7.2:+17135231 MS.gene072323:CDS
AAGATTTCTGGAACTACAAA+TGG 0.398447 7.2:+17135785 MS.gene072323:CDS
GTGGACCAGGCCATGGCATC+AGG 0.404513 7.2:+17135588 MS.gene072323:CDS
GTCAAAGATTATGGAGCTAA+AGG 0.414898 7.2:+17134088 MS.gene072323:CDS
CAAGGACCAGAGAATCTGAT+TGG 0.415737 7.2:-17134524 None:intergenic
AAAATCTCTAGCTCTATCAT+AGG 0.416238 7.2:+17135349 MS.gene072323:CDS
TCAAAGATTATGGAGCTAAA+GGG 0.422051 7.2:+17134089 MS.gene072323:CDS
GATTGTATATCAATTGTAGA+TGG 0.423588 7.2:+17135533 MS.gene072323:CDS
ATATGAATTCCATCGGTGTT+AGG 0.428068 7.2:-17135307 None:intergenic
GGTCTCAACGTGTCATCGCC+AGG 0.433178 7.2:+17135277 MS.gene072323:CDS
ATATCTCAGTATTGGAAGCT+TGG 0.439364 7.2:+17135712 MS.gene072323:intron
TTCAGGCATTCAAGAAGGCT+TGG 0.439440 7.2:+17134435 MS.gene072323:intron
GATGCCATGGCCTGGTCCAC+AGG 0.440698 7.2:-17135585 None:intergenic
CTCAAACCAATCAGATTCTC+TGG 0.441568 7.2:+17134518 MS.gene072323:CDS
GTGTTGTACCAGAATATAAC+AGG 0.441587 7.2:+17136739 MS.gene072323:CDS
TACATTATTATTCAAGAACT+TGG 0.444587 7.2:+17133994 MS.gene072323:CDS
TAATGTATCACCATCATCAT+AGG 0.445190 7.2:-17133978 None:intergenic
TCTAGCTCTATCATAGGAAC+TGG 0.455625 7.2:+17135355 MS.gene072323:CDS
CTTTAACATTAATCGAATCC+TGG 0.456787 7.2:-17135249 None:intergenic
CTGGTTGATTATTATGGGGT+TGG 0.457178 7.2:-17136531 None:intergenic
GTTTCGGGAGTATTAGTGAA+TGG 0.461707 7.2:+17135758 MS.gene072323:CDS
TCAGGCATTCAAGAAGGCTT+GGG 0.482423 7.2:+17134436 MS.gene072323:intron
TTGTTGCATAAAGCCTTAGC+AGG 0.490400 7.2:-17136865 None:intergenic
AACTACCTGATGCCATGGCC+TGG 0.490944 7.2:-17135593 None:intergenic
TACTCCCGAAACAATGTCCC+TGG 0.495411 7.2:-17135747 None:intergenic
TGATCTTCACTGTAATCTGA+TGG 0.496203 7.2:-17134723 None:intergenic
AGCAACTATTAGTTAATGGT+GGG 0.503518 7.2:+17134775 MS.gene072323:CDS
ATACTCTTAATATGTGAAGA+AGG 0.514121 7.2:+17136838 MS.gene072323:CDS
CAGCAACTATTAGTTAATGG+TGG 0.520571 7.2:+17134774 MS.gene072323:CDS
GGTGGCAAAACTCATGCAAA+AGG 0.522181 7.2:+17134826 MS.gene072323:CDS
TAATATTCAGGCATTCAAGA+AGG 0.522536 7.2:+17134430 MS.gene072323:intron
AGTAGATAATTATAATCTTG+AGG 0.527229 7.2:-17134497 None:intergenic
TAATCGAATCCTGGAATGAA+AGG 0.538023 7.2:-17135240 None:intergenic
GGGAAGTAGTATGTGATTCA+GGG 0.539599 7.2:+17134456 MS.gene072323:CDS
TCTAACATTTGATAGTTGCA+AGG 0.555087 7.2:+17135171 MS.gene072323:CDS
TGATGACGATAGTGAATGAG+AGG 0.555898 7.2:-17133883 None:intergenic
GATTATGGAGCTAAAGGGGA+TGG 0.559266 7.2:+17134094 MS.gene072323:CDS
CAACGTATGTAGTAATAAGC+GGG 0.563528 7.2:-17133943 None:intergenic
AATTCTGGTTGATTATTATG+GGG 0.564037 7.2:-17136535 None:intergenic
AGTTAGAATTAAGACTTGGC+CGG 0.569890 7.2:+17135808 MS.gene072323:CDS
ACAGACATTACCTGTGGACC+AGG 0.570239 7.2:+17135575 MS.gene072323:CDS
ACTGATATGTTAGATTTGCA+AGG 0.570724 7.2:-17134542 None:intergenic
GCAACTATTAGTTAATGGTG+GGG 0.572896 7.2:+17134776 MS.gene072323:CDS
TCGATGGAAAAGGAAACATA+TGG 0.573459 7.2:+17134805 MS.gene072323:CDS
GATTCACCTTCCTATGATGA+TGG 0.579625 7.2:+17133968 MS.gene072323:CDS
ATCTCAGTATTGGAAGCTTG+GGG 0.581140 7.2:+17135714 MS.gene072323:intron
GCCTTGCAAGGATGCTCCAA+CGG 0.581239 7.2:+17134987 MS.gene072323:intron
CAAAGATTATGGAGCTAAAG+GGG 0.581495 7.2:+17134090 MS.gene072323:CDS
AATGTTCAATTGTCTTACAC+AGG 0.586671 7.2:+17136886 MS.gene072323:CDS
ACCGTTGGAGCATCCTTGCA+AGG 0.589497 7.2:-17134988 None:intergenic
ATTACCTGTGGACCAGGCCA+TGG 0.589996 7.2:+17135581 MS.gene072323:CDS
CAACTATTAGTTAATGGTGG+GGG 0.593365 7.2:+17134777 MS.gene072323:CDS
TGAAGAAGGAGAACCTGCTA+AGG 0.593731 7.2:+17136852 MS.gene072323:CDS
TTGCAATAGCAACTTGCAAG+AGG 0.593871 7.2:+17133919 MS.gene072323:CDS
TCGAATCCTGGAATGAAAGG+TGG 0.594827 7.2:-17135237 None:intergenic
AGAGGAGGAATTGTCTTAGG+AGG 0.600709 7.2:-17133865 None:intergenic
TGGTCCACAGGTAATGTCTG+TGG 0.601877 7.2:-17135573 None:intergenic
GTCTCAACGTGTCATCGCCA+GGG 0.608495 7.2:+17135278 MS.gene072323:CDS
AAGTTAACTACCTGATGCCA+TGG 0.609029 7.2:-17135598 None:intergenic
GGGAATAGTCCTAACACCGA+TGG 0.616454 7.2:+17135298 MS.gene072323:CDS
ATGGAGTTAGAATTAAGACT+TGG 0.618304 7.2:+17135804 MS.gene072323:CDS
ATTGGTGATATGAATTCCAT+CGG 0.620342 7.2:-17135314 None:intergenic
TGACGATAGTGAATGAGAGG+AGG 0.634888 7.2:-17133880 None:intergenic
ACAGTGAAGATCAAAGACAT+TGG 0.636413 7.2:+17134733 MS.gene072323:CDS
TCAACGTATGTAGTAATAAG+CGG 0.641060 7.2:-17133944 None:intergenic
TCGGTGTTAGGACTATTCCC+TGG 0.643264 7.2:-17135295 None:intergenic
GTATCACCATCATCATAGGA+AGG 0.644782 7.2:-17133974 None:intergenic
TGTGTTTATGCAGGACTCTG+CGG 0.649850 7.2:+17136702 MS.gene072323:intron
TATTTCTATGAGTTGCAGCG+TGG 0.662487 7.2:-17136919 None:intergenic
TCTCAGTATTGGAAGCTTGG+GGG 0.679058 7.2:+17135715 MS.gene072323:intron
TGGTCATACTGATGACACAC+AGG 0.686944 7.2:+17134114 MS.gene072323:CDS
ATGGAAAAGGAAACATATGG+TGG 0.687596 7.2:+17134808 MS.gene072323:CDS
GAAGCCACAGACATTACCTG+TGG 0.698968 7.2:+17135569 MS.gene072323:CDS
GAGAACGTGAAGTGACACCA+TGG 0.725055 7.2:-17134051 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAAAACAAAAAATATCT+TGG - chr7.2:17134194-17134213 None:intergenic 10.0%
!! TTATAATTTACTTAAAAATG+TGG - chr7.2:17134635-17134654 None:intergenic 10.0%
!!! AAATTAAAGTTTAAAATTAC+CGG - chr7.2:17135830-17135849 None:intergenic 10.0%
!!! TCTTATTTGATTAAATATAA+AGG - chr7.2:17136416-17136435 None:intergenic 10.0%
!! AAAAAAACCATGTAAAAAAA+TGG + chr7.2:17136571-17136590 MS.gene072323:CDS 15.0%
!! ATAATTAGTTAATTAATCAC+TGG - chr7.2:17134594-17134613 None:intergenic 15.0%
!! CATACAAAATATTAAATTAG+TGG - chr7.2:17134311-17134330 None:intergenic 15.0%
!! TATATATTTATAAAAGATGG+AGG - chr7.2:17135959-17135978 None:intergenic 15.0%
!!! AACTTAAATTTTCCTATAAT+TGG + chr7.2:17134393-17134412 MS.gene072323:intron 15.0%
!!! AATAAGACATAAATTTTCTT+TGG + chr7.2:17136429-17136448 MS.gene072323:intron 15.0%
!!! AATTGACTTGATTAAAATAT+TGG - chr7.2:17134885-17134904 None:intergenic 15.0%
!!! ATTGACTTGATTAAAATATT+GGG - chr7.2:17134884-17134903 None:intergenic 15.0%
!!! CTAACTAATTTTATTTTTGT+AGG + chr7.2:17135147-17135166 MS.gene072323:intron 15.0%
!!! GAAATATTTTATTGATTTAG+TGG - chr7.2:17136195-17136214 None:intergenic 15.0%
!!! TAATTTACCATTTTTTTACA+TGG - chr7.2:17136581-17136600 None:intergenic 15.0%
!!! TCCATCTTTTATAAATATAT+AGG + chr7.2:17135958-17135977 MS.gene072323:intron 15.0%
!!! TGTAAACATAAGATTTTTTA+TGG - chr7.2:17136138-17136157 None:intergenic 15.0%
!!! TTGTTTTCAATTATAACAAT+GGG + chr7.2:17134221-17134240 MS.gene072323:intron 15.0%
!!! TTTGTTTTCAATTATAACAA+TGG + chr7.2:17134220-17134239 MS.gene072323:intron 15.0%
!! AAATTTAATTGTCAGATATC+TGG + chr7.2:17134678-17134697 MS.gene072323:intron 20.0%
!! AACAATACATAATATATGCA+AGG + chr7.2:17135895-17135914 MS.gene072323:intron 20.0%
!! AGTAGATAATTATAATCTTG+AGG - chr7.2:17134500-17134519 None:intergenic 20.0%
!! ATTAAACACAATAATAGTGT+TGG + chr7.2:17136282-17136301 MS.gene072323:intron 20.0%
!! ATTGTTAATGTCAAAGATTA+TGG + chr7.2:17134079-17134098 MS.gene072323:CDS 20.0%
!! CTCAGTTGTTAAATTTAAAT+TGG + chr7.2:17135066-17135085 MS.gene072323:intron 20.0%
!! GCCTATATATTTATAAAAGA+TGG - chr7.2:17135962-17135981 None:intergenic 20.0%
!! TACACATAAATGAGTTTAAT+GGG + chr7.2:17136154-17136173 MS.gene072323:intron 20.0%
!! TACATTATTATTCAAGAACT+TGG + chr7.2:17133994-17134013 MS.gene072323:CDS 20.0%
!! TGATTTATATATCTCAGTAT+TGG + chr7.2:17135704-17135723 MS.gene072323:intron 20.0%
!! TGTTATAGATTTCATAATCA+AGG + chr7.2:17135096-17135115 MS.gene072323:intron 20.0%
!! TTACACATAAATGAGTTTAA+TGG + chr7.2:17136153-17136172 MS.gene072323:intron 20.0%
!! TTGAATTCTTTATTGATCAT+AGG + chr7.2:17136377-17136396 MS.gene072323:intron 20.0%
!!! ACATATTTAAACTCGTTTTA+AGG + chr7.2:17135999-17136018 MS.gene072323:intron 20.0%
!!! ATTTAAAATAAGTGCATGTT+TGG + chr7.2:17136080-17136099 MS.gene072323:intron 20.0%
!!! CAAAAAAAAGTACAAGAATT+AGG + chr7.2:17135412-17135431 MS.gene072323:intron 20.0%
!!! TAAGAAAACCAAATTAGTTT+AGG - chr7.2:17134334-17134353 None:intergenic 20.0%
!!! TAATTCTGGTTGATTATTAT+GGG - chr7.2:17136539-17136558 None:intergenic 20.0%
!!! TCATAATCAAGGATTTTAAT+TGG + chr7.2:17135107-17135126 MS.gene072323:intron 20.0%
! AAAAATGTGGTGCTTAAAAA+CGG - chr7.2:17134622-17134641 None:intergenic 25.0%
! AATATAAAGGTGAGTAAGTT+AGG - chr7.2:17136403-17136422 None:intergenic 25.0%
! ATACTCTTAATATGTGAAGA+AGG + chr7.2:17136838-17136857 MS.gene072323:CDS 25.0%
! CAAATTTCAGAACATTGAAA+TGG + chr7.2:17136499-17136518 MS.gene072323:CDS 25.0%
! CTAAATTGTCGAGAAAATTT+AGG - chr7.2:17135031-17135050 None:intergenic 25.0%
! GATAGATTAGTATATCAAAG+TGG - chr7.2:17136032-17136051 None:intergenic 25.0%
! GATTGTATATCAATTGTAGA+TGG + chr7.2:17135533-17135552 MS.gene072323:CDS 25.0%
! TACATAATATATGCAAGGTT+CGG + chr7.2:17135900-17135919 MS.gene072323:intron 25.0%
! TTTGTATGCCTAAACTAATT+TGG + chr7.2:17134323-17134342 MS.gene072323:intron 25.0%
!! AATTCTGGTTGATTATTATG+GGG - chr7.2:17136538-17136557 None:intergenic 25.0%
!! GAGAAAAAGCATAAAAAAGT+TGG - chr7.2:17134957-17134976 None:intergenic 25.0%
!! GTAATTCTGGTTGATTATTA+TGG - chr7.2:17136540-17136559 None:intergenic 25.0%
!! TTATGATTTTGTGTTTATGC+AGG + chr7.2:17136693-17136712 MS.gene072323:intron 25.0%
!!! ATAAATTTTCTTTGGTCTTG+CGG + chr7.2:17136437-17136456 MS.gene072323:intron 25.0%
AATGTTCAATTGTCTTACAC+AGG + chr7.2:17136886-17136905 MS.gene072323:CDS 30.0%
ACATAATATATGCAAGGTTC+GGG + chr7.2:17135901-17135920 MS.gene072323:intron 30.0%
ACTGATATGTTAGATTTGCA+AGG - chr7.2:17134545-17134564 None:intergenic 30.0%
AGATTAGTATATCAAAGTGG+TGG - chr7.2:17136029-17136048 None:intergenic 30.0%
AGCAACTATTAGTTAATGGT+GGG + chr7.2:17134775-17134794 MS.gene072323:CDS 30.0%
ATGGAGTTAGAATTAAGACT+TGG + chr7.2:17135804-17135823 MS.gene072323:CDS 30.0%
ATGTGGGACATTTAATATTC+AGG + chr7.2:17134418-17134437 MS.gene072323:intron 30.0%
CAAATCTAACATATCAGTTC+AGG + chr7.2:17134547-17134566 MS.gene072323:CDS 30.0%
CTTTAACATTAATCGAATCC+TGG - chr7.2:17135252-17135271 None:intergenic 30.0%
GTAAAGTAAATAGAGCAAAG+TGG + chr7.2:17136252-17136271 MS.gene072323:intron 30.0%
GTAAGTAGCTATCTATATGT+TGG - chr7.2:17136666-17136685 None:intergenic 30.0%
GTTCAGCAACTATTAGTTAA+TGG + chr7.2:17134771-17134790 MS.gene072323:CDS 30.0%
TAATATTCAGGCATTCAAGA+AGG + chr7.2:17134430-17134449 MS.gene072323:intron 30.0%
TAATGTATCACCATCATCAT+AGG - chr7.2:17133981-17134000 None:intergenic 30.0%
TCAAAGATTATGGAGCTAAA+GGG + chr7.2:17134089-17134108 MS.gene072323:CDS 30.0%
TCAACGTATGTAGTAATAAG+CGG - chr7.2:17133947-17133966 None:intergenic 30.0%
TCGATTAATGTTAAAGCTTC+TGG + chr7.2:17135256-17135275 MS.gene072323:CDS 30.0%
TGAATATTAAATGTCCCACA+TGG - chr7.2:17134419-17134438 None:intergenic 30.0%
! AATAGTGTTGGATCAATAGA+TGG + chr7.2:17136294-17136313 MS.gene072323:intron 30.0%
! ATTGGTGATATGAATTCCAT+CGG - chr7.2:17135317-17135336 None:intergenic 30.0%
! TCTAACATTTGATAGTTGCA+AGG + chr7.2:17135171-17135190 MS.gene072323:CDS 30.0%
! TTTTCTTGTCACAGTAATTC+TGG - chr7.2:17136553-17136572 None:intergenic 30.0%
!! AAAATCTCTAGCTCTATCAT+AGG + chr7.2:17135349-17135368 MS.gene072323:CDS 30.0%
!! AAGATTTCTGGAACTACAAA+TGG + chr7.2:17135785-17135804 MS.gene072323:CDS 30.0%
!! AGCTAGAGATTTTGATGTTT+TGG - chr7.2:17135342-17135361 None:intergenic 30.0%
!! GATTTTGATGTTTTGGGTAT+TGG - chr7.2:17135335-17135354 None:intergenic 30.0%
!! GCTAGAGATTTTGATGTTTT+GGG - chr7.2:17135341-17135360 None:intergenic 30.0%
!!! CTTTTCCTGTAATTTGTTTC+AGG + chr7.2:17135506-17135525 MS.gene072323:intron 30.0%
AAAATCCAGGGACATTGTTT+CGG + chr7.2:17135742-17135761 MS.gene072323:CDS 35.0%
ACAACTGAGATTTGACTGAA+TGG - chr7.2:17135055-17135074 None:intergenic 35.0%
ACACTACAAGTACACTATAC+TGG + chr7.2:17136629-17136648 MS.gene072323:intron 35.0%
ACAGTGAAGATCAAAGACAT+TGG + chr7.2:17134733-17134752 MS.gene072323:CDS 35.0%
AGTTAGAATTAAGACTTGGC+CGG + chr7.2:17135808-17135827 MS.gene072323:CDS 35.0%
ATGGAAAAGGAAACATATGG+TGG + chr7.2:17134808-17134827 MS.gene072323:CDS 35.0%
CAAAGATTATGGAGCTAAAG+GGG + chr7.2:17134090-17134109 MS.gene072323:CDS 35.0%
CAACGTATGTAGTAATAAGC+GGG - chr7.2:17133946-17133965 None:intergenic 35.0%
CAACTATTAGTTAATGGTGG+GGG + chr7.2:17134777-17134796 MS.gene072323:CDS 35.0%
CAGCAACTATTAGTTAATGG+TGG + chr7.2:17134774-17134793 MS.gene072323:CDS 35.0%
CAGTGAAAAATTTCCATGCA+AGG + chr7.2:17136798-17136817 MS.gene072323:CDS 35.0%
CATAATATATGCAAGGTTCG+GGG + chr7.2:17135902-17135921 MS.gene072323:intron 35.0%
GCAACTATTAGTTAATGGTG+GGG + chr7.2:17134776-17134795 MS.gene072323:CDS 35.0%
GGTACAACACATTGCTAATT+TGG - chr7.2:17136729-17136748 None:intergenic 35.0%
GTCAAAGATTATGGAGCTAA+AGG + chr7.2:17134088-17134107 MS.gene072323:CDS 35.0%
GTGTTGTACCAGAATATAAC+AGG + chr7.2:17136739-17136758 MS.gene072323:CDS 35.0%
TAATCGAATCCTGGAATGAA+AGG - chr7.2:17135243-17135262 None:intergenic 35.0%
TCGATGGAAAAGGAAACATA+TGG + chr7.2:17134805-17134824 MS.gene072323:CDS 35.0%
TGATCTTCACTGTAATCTGA+TGG - chr7.2:17134726-17134745 None:intergenic 35.0%
TTTCCTATAATTGGCCATGT+GGG + chr7.2:17134402-17134421 MS.gene072323:intron 35.0%
! ATATCTCAGTATTGGAAGCT+TGG + chr7.2:17135712-17135731 MS.gene072323:intron 35.0%
! ATATGAATTCCATCGGTGTT+AGG - chr7.2:17135310-17135329 None:intergenic 35.0%
! CACTTTTGCCTGTTATATTC+TGG - chr7.2:17136750-17136769 None:intergenic 35.0%
! TATCTCAGTATTGGAAGCTT+GGG + chr7.2:17135713-17135732 MS.gene072323:intron 35.0%
! TATGTTTCCTTTTCCATCGA+TGG - chr7.2:17134805-17134824 None:intergenic 35.0%
! TGCATTTTTATCTCCTTGCA+TGG - chr7.2:17136814-17136833 None:intergenic 35.0%
! TTTTCCTATAATTGGCCATG+TGG + chr7.2:17134401-17134420 MS.gene072323:intron 35.0%
AAATCCAGGGACATTGTTTC+GGG + chr7.2:17135743-17135762 MS.gene072323:CDS 40.0%
AAGTTAACTACCTGATGCCA+TGG - chr7.2:17135601-17135620 None:intergenic 40.0%
ACAAATCCACCTTTCATTCC+AGG + chr7.2:17135231-17135250 MS.gene072323:CDS 40.0%
ATGAGAGGAGGAATTGTCTT+AGG - chr7.2:17133871-17133890 None:intergenic 40.0%
ATGAGTTTAATGGGATCCTC+TGG + chr7.2:17136163-17136182 MS.gene072323:intron 40.0%
CGTCACCTGAAACAAATTAC+AGG - chr7.2:17135514-17135533 None:intergenic 40.0%
CTCAAACCAATCAGATTCTC+TGG + chr7.2:17134518-17134537 MS.gene072323:CDS 40.0%
CTGGTTGATTATTATGGGGT+TGG - chr7.2:17136534-17136553 None:intergenic 40.0%
GAGCTATGTATACATACCGT+TGG - chr7.2:17135006-17135025 None:intergenic 40.0%
GATTCACCTTCCTATGATGA+TGG + chr7.2:17133968-17133987 MS.gene072323:CDS 40.0%
GGGAAGTAGTATGTGATTCA+GGG + chr7.2:17134456-17134475 MS.gene072323:CDS 40.0%
GTATCACCATCATCATAGGA+AGG - chr7.2:17133977-17133996 None:intergenic 40.0%
GTGAATGGAGCTAAGATTTC+TGG + chr7.2:17135773-17135792 MS.gene072323:CDS 40.0%
TGGGAAGTAGTATGTGATTC+AGG + chr7.2:17134455-17134474 MS.gene072323:CDS 40.0%
TTCATGAGAGCTACAGAGAT+CGG - chr7.2:17136217-17136236 None:intergenic 40.0%
TTGCAATAGCAACTTGCAAG+AGG + chr7.2:17133919-17133938 MS.gene072323:CDS 40.0%
TTGTTGCATAAAGCCTTAGC+AGG - chr7.2:17136868-17136887 None:intergenic 40.0%
! ATCTCAGTATTGGAAGCTTG+GGG + chr7.2:17135714-17135733 MS.gene072323:intron 40.0%
! GATTTTTCGTGCTTAGACCA+TGG + chr7.2:17134034-17134053 MS.gene072323:CDS 40.0%
! TGATGACGATAGTGAATGAG+AGG - chr7.2:17133886-17133905 None:intergenic 40.0%
!! GTTTCGGGAGTATTAGTGAA+TGG + chr7.2:17135758-17135777 MS.gene072323:CDS 40.0%
!! TCTAGCTCTATCATAGGAAC+TGG + chr7.2:17135355-17135374 MS.gene072323:CDS 40.0%
!!! AAGATGGAGGAGACGTTTTT+TGG - chr7.2:17135946-17135965 None:intergenic 40.0%
!!! AATTTTCTTTGGTCTTGCGG+TGG + chr7.2:17136440-17136459 MS.gene072323:intron 40.0%
AAAGCTCACGAGGACAAAGA+AGG - chr7.2:17135861-17135880 None:intergenic 45.0%
AGAGGAGGAATTGTCTTAGG+AGG - chr7.2:17133868-17133887 None:intergenic 45.0%
CAAGGACCAGAGAATCTGAT+TGG - chr7.2:17134527-17134546 None:intergenic 45.0%
GATTATGGAGCTAAAGGGGA+TGG + chr7.2:17134094-17134113 MS.gene072323:CDS 45.0%
GGTGGCAAAACTCATGCAAA+AGG + chr7.2:17134826-17134845 MS.gene072323:CDS 45.0%
TCAGGCATTCAAGAAGGCTT+GGG + chr7.2:17134436-17134455 MS.gene072323:intron 45.0%
TCGAATCCTGGAATGAAAGG+TGG - chr7.2:17135240-17135259 None:intergenic 45.0%
TCTTGCGGTGGTTAAATGCA+GGG + chr7.2:17136452-17136471 MS.gene072323:intron 45.0%
TGAAGAAGGAGAACCTGCTA+AGG + chr7.2:17136852-17136871 MS.gene072323:CDS 45.0%
TGACGATAGTGAATGAGAGG+AGG - chr7.2:17133883-17133902 None:intergenic 45.0%
TGGTCATACTGATGACACAC+AGG + chr7.2:17134114-17134133 MS.gene072323:CDS 45.0%
TGTCCCACATGGCCAATTAT+AGG - chr7.2:17134408-17134427 None:intergenic 45.0%
TGTGTTTATGCAGGACTCTG+CGG + chr7.2:17136702-17136721 MS.gene072323:intron 45.0%
TTCAGGCATTCAAGAAGGCT+TGG + chr7.2:17134435-17134454 MS.gene072323:intron 45.0%
! GATTTAGTGGATCACACCAG+AGG - chr7.2:17136182-17136201 None:intergenic 45.0%
! TCTCAGTATTGGAAGCTTGG+GGG + chr7.2:17135715-17135734 MS.gene072323:intron 45.0%
! TCTCTTTTTGCAGCCTTGCA+AGG + chr7.2:17134975-17134994 MS.gene072323:intron 45.0%
!! TTCAGGGCAAGCAGTTTTAG+TGG + chr7.2:17134472-17134491 MS.gene072323:CDS 45.0%
!!! ATGGAGGAGACGTTTTTTGG+TGG - chr7.2:17135943-17135962 None:intergenic 45.0%
ACAGACATTACCTGTGGACC+AGG + chr7.2:17135575-17135594 MS.gene072323:CDS 50.0%
CTAACTGAGCAAAGCTCACG+AGG - chr7.2:17135871-17135890 None:intergenic 50.0%
CTCACGAGGACAAAGAAGGA+GGG - chr7.2:17135857-17135876 None:intergenic 50.0%
GAAGCCACAGACATTACCTG+TGG + chr7.2:17135569-17135588 MS.gene072323:CDS 50.0%
GAGAACGTGAAGTGACACCA+TGG - chr7.2:17134054-17134073 None:intergenic 50.0%
GGGAATAGTCCTAACACCGA+TGG + chr7.2:17135298-17135317 MS.gene072323:CDS 50.0%
GGTTAAATGCAGGGAGGTTC+AGG + chr7.2:17136461-17136480 MS.gene072323:intron 50.0%
GTCTTGCGGTGGTTAAATGC+AGG + chr7.2:17136451-17136470 MS.gene072323:intron 50.0%
TACTCCCGAAACAATGTCCC+TGG - chr7.2:17135750-17135769 None:intergenic 50.0%
TCACGAGGACAAAGAAGGAG+GGG - chr7.2:17135856-17135875 None:intergenic 50.0%
TGGTCCACAGGTAATGTCTG+TGG - chr7.2:17135576-17135595 None:intergenic 50.0%
!! TCGGTGTTAGGACTATTCCC+TGG - chr7.2:17135298-17135317 None:intergenic 50.0%
!!! AGACGTTTTTTGGTGGTGGC+CGG - chr7.2:17135936-17135955 None:intergenic 50.0%
!!! GAGGAGACGTTTTTTGGTGG+TGG - chr7.2:17135940-17135959 None:intergenic 50.0%
AACTACCTGATGCCATGGCC+TGG - chr7.2:17135596-17135615 None:intergenic 55.0%
AAGGTTCGGGGTTCAAACCC+CGG + chr7.2:17135914-17135933 MS.gene072323:intron 55.0%
ATTACCTGTGGACCAGGCCA+TGG + chr7.2:17135581-17135600 MS.gene072323:CDS 55.0%
CTTGGGGGCTGGAAAATCCA+GGG + chr7.2:17135730-17135749 MS.gene072323:CDS 55.0%
GCCTTGCAAGGATGCTCCAA+CGG + chr7.2:17134987-17135006 MS.gene072323:intron 55.0%
GCTCACGAGGACAAAGAAGG+AGG - chr7.2:17135858-17135877 None:intergenic 55.0%
GGGGGAACCATCGATGGAAA+AGG + chr7.2:17134795-17134814 MS.gene072323:CDS 55.0%
GTCTCAACGTGTCATCGCCA+GGG + chr7.2:17135278-17135297 MS.gene072323:CDS 55.0%
TGCGGTGGTTAAATGCAGGG+AGG + chr7.2:17136455-17136474 MS.gene072323:intron 55.0%
! AATGGTGGGGGAACCATCGA+TGG + chr7.2:17134789-17134808 MS.gene072323:CDS 55.0%
! ACCGTTGGAGCATCCTTGCA+AGG - chr7.2:17134991-17135010 None:intergenic 55.0%
! AGTATTGGAAGCTTGGGGGC+TGG + chr7.2:17135719-17135738 MS.gene072323:intron 55.0%
!!! ACGTTTTTTGGTGGTGGCCG+GGG - chr7.2:17135934-17135953 None:intergenic 55.0%
!!! GACGTTTTTTGGTGGTGGCC+GGG - chr7.2:17135935-17135954 None:intergenic 55.0%
GCTTGGGGGCTGGAAAATCC+AGG + chr7.2:17135729-17135748 MS.gene072323:CDS 60.0%
GGTCTCAACGTGTCATCGCC+AGG + chr7.2:17135277-17135296 MS.gene072323:CDS 60.0%
GATGCCATGGCCTGGTCCAC+AGG - chr7.2:17135588-17135607 None:intergenic 65.0%
GTGGACCAGGCCATGGCATC+AGG + chr7.2:17135588-17135607 MS.gene072323:CDS 65.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 17133860 17136936 17133860 ID=MS.gene072323
chr7.2 mRNA 17133860 17136936 17133860 ID=MS.gene072323.t1;Parent=MS.gene072323
chr7.2 exon 17133860 17134135 17133860 ID=MS.gene072323.t1.exon1;Parent=MS.gene072323.t1
chr7.2 CDS 17133860 17134135 17133860 ID=cds.MS.gene072323.t1;Parent=MS.gene072323.t1
chr7.2 exon 17134440 17134568 17134440 ID=MS.gene072323.t1.exon2;Parent=MS.gene072323.t1
chr7.2 CDS 17134440 17134568 17134440 ID=cds.MS.gene072323.t1;Parent=MS.gene072323.t1
chr7.2 exon 17134693 17134860 17134693 ID=MS.gene072323.t1.exon3;Parent=MS.gene072323.t1
chr7.2 CDS 17134693 17134860 17134693 ID=cds.MS.gene072323.t1;Parent=MS.gene072323.t1
chr7.2 exon 17134988 17135008 17134988 ID=MS.gene072323.t1.exon4;Parent=MS.gene072323.t1
chr7.2 CDS 17134988 17135008 17134988 ID=cds.MS.gene072323.t1;Parent=MS.gene072323.t1
chr7.2 exon 17135169 17135376 17135169 ID=MS.gene072323.t1.exon5;Parent=MS.gene072323.t1
chr7.2 CDS 17135169 17135376 17135169 ID=cds.MS.gene072323.t1;Parent=MS.gene072323.t1
chr7.2 exon 17135528 17135609 17135528 ID=MS.gene072323.t1.exon6;Parent=MS.gene072323.t1
chr7.2 CDS 17135528 17135609 17135528 ID=cds.MS.gene072323.t1;Parent=MS.gene072323.t1
chr7.2 exon 17135721 17135829 17135721 ID=MS.gene072323.t1.exon7;Parent=MS.gene072323.t1
chr7.2 CDS 17135721 17135829 17135721 ID=cds.MS.gene072323.t1;Parent=MS.gene072323.t1
chr7.2 exon 17136473 17136592 17136473 ID=MS.gene072323.t1.exon8;Parent=MS.gene072323.t1
chr7.2 CDS 17136473 17136592 17136473 ID=cds.MS.gene072323.t1;Parent=MS.gene072323.t1
chr7.2 exon 17136715 17136936 17136715 ID=MS.gene072323.t1.exon9;Parent=MS.gene072323.t1
chr7.2 CDS 17136715 17136936 17136715 ID=cds.MS.gene072323.t1;Parent=MS.gene072323.t1
Gene Sequence

>MS.gene072323

ATGGTCCTCCTAAGACAATTCCTCCTCTCATTCACTATCGTCATCATTTCATTTGTTGCTTGCAATAGCAACTTGCAAGAGGACCCGCTTATTACTACATACGTTGATGATTCACCTTCCTATGATGATGGTGATACATTATTATTCAAGAACTTGGTTGAGCAAAACACAAATGATTTTTCGTGCTTAGACCATGGTGTCACTTCACGTTCTCTTAAAATTGTTAATGTCAAAGATTATGGAGCTAAAGGGGATGGTCATACTGATGACACACAGGTATATTAATAAACTCATCATATATAGCTTAAAAATCATAATATATTCATCTAGTCCAAGATATTTTTTGTTTTTAATTTTTGTTTTGTTTTCAATTATAACAATGGGTTACAAAAGAAAATTAACAATAGAACTATTGATAAATTTCATATTTTTTCTCTCTAAATTTATACCACTAATTTAATATTTTGTATGCCTAAACTAATTTGGTTTTCTTATGATTAAAAAAGCAACATTAATTGATTTTCTAAAAAAATAACTTAAATTTTCCTATAATTGGCCATGTGGGACATTTAATATTCAGGCATTCAAGAAGGCTTGGGAAGTAGTATGTGATTCAGGGCAAGCAGTTTTAGTGGCACCTCAAGATTATAATTATCTACTCAAACCAATCAGATTCTCTGGTCCTTGCAAATCTAACATATCAGTTCAGGTTAGTTACATTATATATTAAGCCAGTGATTAATTAACTAATTATTTCTTCCGTTTTTAAGCACCACATTTTTAAGTAAATTATAATCTCAAAACGTAACTTTTTTCAAAAATTTAATTGTCAGATATCTGGAAGTCTTGAAGCATCAGATAATCCATCAGATTACAGTGAAGATCAAAGACATTGGCTTGTATTTGAGCAAGTTCAGCAACTATTAGTTAATGGTGGGGGAACCATCGATGGAAAAGGAAACATATGGTGGCAAAACTCATGCAAAAGGAACAAAAAGAAAGTAAGATATCACAATTACGTCCCAATATTTTAATCAAGTCAATTATATGCATCAATGAATCTATATAATTAATCATATTCAAATTAATTATGACCAACTTTTTTATGCTTTTTCTCTCTTTTTGCAGCCTTGCAAGGATGCTCCAACGGTATGTATACATAGCTCTACCTAAATTTTCTCGACAATTTAGTCCATTCAGTCAAATCTCAGTTGTTAAATTTAAATTGGATTGAATTGTTATAGATTTCATAATCAAGGATTTTAATTGGATATACTTGTTAATTAACTAACTAATTTTATTTTTGTAGGCTCTAACATTTGATAGTTGCAAGGATTTAATAGTTGACGATTTGACAATACAAAATGCACAACAAATCCACCTTTCATTCCAGGATTCGATTAATGTTAAAGCTTCTGGTCTCAACGTGTCATCGCCAGGGAATAGTCCTAACACCGATGGAATTCATATCACCAATACCCAAAACATCAAAATCTCTAGCTCTATCATAGGAACTGGTATATTCATAATCAAATATCTAAAAAATTTGAAACAAAAAAAAGTACAAGAATTAGGAATGAAAATTCATATTTTTATAGACAAATTAAAATTTATATATGTATACTCATAATTAATTAATTAATTTACTTTTCCTGTAATTTGTTTCAGGTGACGATTGTATATCAATTGTAGATGGATCTAGTAATGTAGAAGCCACAGACATTACCTGTGGACCAGGCCATGGCATCAGGTAGTTAACTTGTGAAATTCAAGTTTTATTTTTGTAATTAATATCAGTTTTATTATATTGTATTATTTTTATATGAATTTTATTTTATTTGCAATGATTTATATATCTCAGTATTGGAAGCTTGGGGGCTGGAAAATCCAGGGACATTGTTTCGGGAGTATTAGTGAATGGAGCTAAGATTTCTGGAACTACAAATGGAGTTAGAATTAAGACTTGGCCGGTAATTTTAAACTTTAATTTAGTCCCCTCCTTCTTTGTCCTCGTGAGCTTTGCTCAGTTAGTAGAAACAATACATAATATATGCAAGGTTCGGGGTTCAAACCCCGGCCACCACCAAAAAACGTCTCCTCCATCTTTTATAAATATATAGGCTCAAGAGATGATTGAGCACATATTTAAACTCGTTTTAAGGAGTTCCACCACTTTGATATACTAATCTATCATCTACTAATGATGATTGACAAAATTTAATTTAAAATAAGTGCATGTTTGGTATCACAATGAGTATGTGTGTCGTTTATCATTCCATAAAAAATCTTATGTTTACACATAAATGAGTTTAATGGGATCCTCTGGTGTGATCCACTAAATCAATAAAATATTTCCGATCTCTGTAGCTCTCATGAATTGAGAATAAGTGAAGTAAAGTAAATAGAGCAAAGTGGAACTCTAATTAAACACAATAATAGTGTTGGATCAATAGATGGAGAAAACATACACTAGTACATACATTTTGAAAGCATGAAATGAAAGTAAGATTATGAAAATTGAATTCTTTATTGATCATAGGCCTAACTTACTCACCTTTATATTTAATCAAATAAGACATAAATTTTCTTTGGTCTTGCGGTGGTTAAATGCAGGGAGGTTCAGGAAGTGCTAGCAACATCAAATTTCAGAACATTGAAATGGACAATGTGACCAACCCCATAATAATCAACCAGAATTACTGTGACAAGAAAAAAAAACCATGTAAAAAAATGGTAAATTATTTTTCATAACTCTTGCTATATATATATACACTACAAGTACACTATACTGGCTACAGACACACCAACATATAGATAGCTACTTACATTTTTTTTATGATTTTGTGTTTATGCAGGACTCTGCGGTCCAAATTAGCAATGTGTTGTACCAGAATATAACAGGCAAAAGTGCTTCTGATGTAGCTGTAAAGTTTGATTGCAGTGAAAAATTTCCATGCAAGGAGATAAAAATGCAAAACATACTCTTAATATGTGAAGAAGGAGAACCTGCTAAGGCTTTATGCAACAATGTTCAATTGTCTTACACAGGAAATGTTAATCCACGCTGCAACTCATAG
Protein sequence

>MS.gene072323.t1

MVLLRQFLLSFTIVIISFVACNSNLQEDPLITTYVDDSPSYDDGDTLLFKNLVEQNTNDFSCLDHGVTSRSLKIVNVKDYGAKGDGHTDDTQAFKKAWEVVCDSGQAVLVAPQDYNYLLKPIRFSGPCKSNISVQISGSLEASDNPSDYSEDQRHWLVFEQVQQLLVNGGGTIDGKGNIWWQNSCKRNKKKPCKDAPTALTFDSCKDLIVDDLTIQNAQQIHLSFQDSINVKASGLNVSSPGNSPNTDGIHITNTQNIKISSSIIGTGDDCISIVDGSSNVEATDITCGPGHGISIGSLGAGKSRDIVSGVLVNGAKISGTTNGVRIKTWPGGSGSASNIKFQNIEMDNVTNPIIINQNYCDKKKKPCKKMDSAVQISNVLYQNITGKSASDVAVKFDCSEKFPCKEIKMQNILLICEEGEPAKALCNNVQLSYTGNVNPRCNS