AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene026763

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene026763.t1 MTR_4g010650 98.762 808 10 0 1 808 1 808 0.0 1665
MS.gene026763.t1 MTR_2g103730 85.167 809 119 1 1 808 1 809 0.0 1452
MS.gene026763.t1 MTR_3g107360 64.140 831 266 11 1 808 1 822 0.0 1082
MS.gene026763.t1 MTR_3g107320 63.101 832 268 10 6 808 5 826 0.0 1065
MS.gene026763.t1 MTR_7g075910 46.303 825 389 17 6 796 299 1103 0.0 726
MS.gene026763.t1 MTR_8g033080 47.296 795 381 15 26 796 258 1038 0.0 721
MS.gene026763.t1 MTR_5g011050 47.594 769 366 14 50 796 90 843 0.0 719
MS.gene026763.t1 MTR_5g011060 45.421 819 400 17 6 796 38 837 0.0 711
MS.gene026763.t1 MTR_5g023050 45.963 805 371 14 50 808 86 872 0.0 706
MS.gene026763.t1 MTR_8g088690 47.595 790 364 16 50 808 72 842 0.0 706
MS.gene026763.t1 MTR_3g114840 46.801 797 368 19 50 808 73 851 0.0 694
MS.gene026763.t1 MTR_2g100250 42.222 810 403 19 6 808 5 756 0.0 613
MS.gene026763.t1 MTR_3g114840 45.788 736 335 19 50 738 73 791 0.0 602
MS.gene026763.t1 MTR_8g016160 40.814 811 399 21 6 808 8 745 0.0 571
MS.gene026763.t1 MTR_8g033080 46.564 582 280 11 26 589 258 826 5.99e-170 512
MS.gene026763.t1 MTR_1g083620 32.636 239 124 10 497 725 477 688 3.83e-21 99.8
MS.gene026763.t1 MTR_1g083620 28.270 237 110 9 211 426 127 324 1.17e-15 82.0
MS.gene026763.t1 MTR_1g083620 32.636 239 124 10 497 725 737 948 5.73e-21 99.4
MS.gene026763.t1 MTR_1g083620 29.825 228 118 10 211 426 387 584 7.99e-16 82.8
MS.gene026763.t1 MTR_5g023040 54.930 71 29 1 324 394 806 873 1.03e-18 91.7
MS.gene026763.t1 MTR_2g435560 30.924 249 132 9 456 692 600 820 2.42e-18 90.9
MS.gene026763.t1 MTR_2g435560 27.155 232 119 8 211 426 253 450 3.28e-15 80.5
MS.gene026763.t1 MTR_2g435560 30.924 249 132 9 456 692 735 955 3.51e-18 90.5
MS.gene026763.t1 MTR_2g435560 27.155 232 119 8 211 426 388 585 3.09e-15 80.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene026763.t1 AT3G15730 81.728 810 146 2 1 808 1 810 0.0 1420
MS.gene026763.t1 AT1G52570 81.358 810 149 2 1 808 1 810 0.0 1412
MS.gene026763.t1 AT1G52570 81.358 810 149 2 1 808 1 810 0.0 1412
MS.gene026763.t1 AT1G52570 81.358 810 149 2 1 808 1 810 0.0 1412
MS.gene026763.t1 AT5G25370 61.576 825 290 10 3 808 4 820 0.0 1035
MS.gene026763.t1 AT5G25370 61.576 825 290 10 3 808 4 820 0.0 1035
MS.gene026763.t1 AT5G25370 61.576 825 290 10 3 808 4 820 0.0 1035
MS.gene026763.t1 AT5G25370 64.334 743 257 6 72 808 5 745 0.0 1000
MS.gene026763.t1 AT2G42010 45.510 824 394 17 6 796 271 1072 0.0 729
MS.gene026763.t1 AT2G42010 44.444 846 396 17 6 796 271 1097 0.0 723
MS.gene026763.t1 AT4G00240 46.545 767 377 13 50 796 11 764 0.0 715
MS.gene026763.t1 AT4G11840 45.157 826 404 15 6 796 44 855 0.0 714
MS.gene026763.t1 AT4G11830 44.928 828 403 15 6 796 34 845 0.0 714
MS.gene026763.t1 AT4G00240 45.512 791 393 14 26 796 144 916 0.0 714
MS.gene026763.t1 AT4G00240 46.545 767 377 13 50 796 128 881 0.0 714
MS.gene026763.t1 AT4G11830 46.323 775 372 13 50 796 55 813 0.0 712
MS.gene026763.t1 AT4G11850 45.200 823 404 16 6 796 40 847 0.0 703
MS.gene026763.t1 AT4G11840 44.606 825 380 15 6 796 44 825 0.0 693
MS.gene026763.t1 AT4G35790 46.491 798 368 17 50 808 80 857 0.0 677
MS.gene026763.t1 AT4G35790 46.106 809 366 18 50 808 80 868 0.0 670
MS.gene026763.t1 AT1G55180 40.678 767 402 17 50 808 19 740 0.0 586
MS.gene026763.t1 AT1G55180 39.286 812 427 18 5 808 9 762 0.0 585
MS.gene026763.t1 AT4G35790 46.242 612 282 12 50 626 80 679 1.06e-173 517
MS.gene026763.t1 AT4G11830 43.669 616 307 11 6 596 34 634 2.90e-169 503
MS.gene026763.t1 AT4G11830 43.907 599 296 11 6 579 34 617 9.02e-165 492
MS.gene026763.t1 AT3G05630 30.932 236 126 8 499 724 714 922 3.55e-20 96.7
MS.gene026763.t1 AT3G05630 27.329 322 155 14 131 426 304 572 3.06e-15 80.9
MS.gene026763.t1 AT3G16785 32.283 254 122 11 456 692 710 930 3.47e-19 93.6
MS.gene026763.t1 AT3G16785 30.942 223 104 9 220 426 389 577 1.25e-15 82.0
MS.gene026763.t1 AT3G16785 32.283 254 122 11 456 692 710 930 3.47e-19 93.6
MS.gene026763.t1 AT3G16785 30.942 223 104 9 220 426 389 577 1.25e-15 82.0
MS.gene026763.t1 AT3G16785 32.283 254 122 11 456 692 710 930 3.83e-19 93.6
MS.gene026763.t1 AT3G16785 30.942 223 104 9 220 426 389 577 1.24e-15 82.0
MS.gene026763.t1 AT3G16785 32.283 254 122 11 456 692 710 930 3.85e-19 93.6
MS.gene026763.t1 AT3G16785 30.942 223 104 9 220 426 389 577 1.29e-15 82.0
MS.gene026763.t1 AT3G16785 32.283 254 122 11 456 692 710 930 3.85e-19 93.6
MS.gene026763.t1 AT3G16785 30.942 223 104 9 220 426 389 577 1.18e-15 82.0
MS.gene026763.t1 AT3G16785 32.283 254 122 11 456 692 710 930 3.85e-19 93.6
MS.gene026763.t1 AT3G16785 30.942 223 104 9 220 426 389 577 1.18e-15 82.0

Find 233 sgRNAs with CRISPR-Local

Find 324 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATAGGTGGGTGGAAATTT+TGG 0.132980 4.1:+85443236 MS.gene026763:CDS
GCTTGAACCGATGCACTTTC+TGG 0.142366 4.1:-85444602 None:intergenic
ATTGATGGTGGGGCTGCTTT+TGG 0.174765 4.1:+85444275 MS.gene026763:CDS
GCAGCATCTTCAGGAGTTTC+TGG 0.186898 4.1:-85444302 None:intergenic
ATCGGTTGGTTTGTTGAAAA+AGG 0.188851 4.1:+85443701 MS.gene026763:CDS
CGTTCTTCTGCCTCGGTAAT+CGG 0.218124 4.1:+85444726 MS.gene026763:CDS
TCCATCCCCGGTAACATTTC+CGG 0.219913 4.1:+85444214 MS.gene026763:CDS
ATCCCTAAAATACCACTTTC+TGG 0.238358 4.1:+85443453 MS.gene026763:CDS
TCGCTCCGTCCATTGATCTT+TGG 0.259842 4.1:-85445023 None:intergenic
TTTCCTTGGTGAGGGATTCT+AGG 0.266899 4.1:+85443580 MS.gene026763:CDS
ACCAGATTGCTGACAAATAT+TGG 0.280067 4.1:+85445214 MS.gene026763:CDS
AGGATTTACTTGTCTCTCTA+AGG 0.282625 4.1:+85444168 MS.gene026763:CDS
CCAGCTCTCGCAGCATCTTC+AGG 0.308289 4.1:-85444311 None:intergenic
AAAAGTCTAGTGAAGGTGTT+AGG 0.315711 4.1:+85443649 MS.gene026763:CDS
ACTCTATGCTACCATTGATT+TGG 0.326580 4.1:+85443017 MS.gene026763:CDS
ACCGCCATCATCAGGATTGC+GGG 0.327108 4.1:-85443799 None:intergenic
CCTGTTGGAGCAACTTTAAT+CGG 0.329996 4.1:+85443168 MS.gene026763:CDS
TCACTTGAGCACGACCTTCC+TGG 0.343592 4.1:+85445255 MS.gene026763:CDS
CTTGAACCGATGCACTTTCT+GGG 0.343605 4.1:-85444601 None:intergenic
GTGAAAAGACTCGTACCATT+TGG 0.347746 4.1:-85443091 None:intergenic
ATCTTAAGTGAAAGTTCCTT+TGG 0.350014 4.1:-85444509 None:intergenic
CCCAATATTTGTCAGCAATC+TGG 0.350230 4.1:-85445215 None:intergenic
ATCCCTCACCAAGGAAATTT+CGG 0.354270 4.1:-85443574 None:intergenic
TTTCATCAACCTAACTTTCC+AGG 0.354896 4.1:+85444023 MS.gene026763:CDS
GACACCAAGGCTCGGATTCT+CGG 0.360309 4.1:+85445354 MS.gene026763:CDS
TGCATCGGTTCAAGCAATAT+TGG 0.369787 4.1:+85444610 MS.gene026763:CDS
CTCTGTGAGAAGAAAGTATA+CGG 0.369951 4.1:-85443378 None:intergenic
TCACATTTACTGTGCTCATA+TGG 0.370819 4.1:+85443110 MS.gene026763:CDS
TGAAAAGACTCGTACCATTT+GGG 0.379443 4.1:-85443090 None:intergenic
ATGCTTATATTAATGCTATT+CGG 0.380918 4.1:+85444378 MS.gene026763:CDS
CCGATTAAAGTTGCTCCAAC+AGG 0.380987 4.1:-85443168 None:intergenic
TCGTAATCTGAATCAGGTTC+TGG 0.383287 4.1:-85444788 None:intergenic
TTCTAGGAGGCCAAAGGCTG+GGG 0.387473 4.1:+85443596 MS.gene026763:CDS
GCCTTGAAGGACCGATCGCT+TGG 0.387667 4.1:+85444099 MS.gene026763:CDS
CTGGCTGTCTTGCAGCTAAA+TGG 0.393197 4.1:-85445083 None:intergenic
ATTGAGGAAACTGTTGGTCT+TGG 0.395386 4.1:+85442979 MS.gene026763:CDS
TGTCCACAACCACAATCTTC+TGG 0.398916 4.1:-85443866 None:intergenic
ATGTCACGAAAGACCGCAGC+TGG 0.399882 4.1:+85443319 MS.gene026763:CDS
AGAATCCGAGCCTTGGTGTC+GGG 0.406985 4.1:-85445351 None:intergenic
GTTCTTCTGCCTCGGTAATC+GGG 0.408625 4.1:+85444727 MS.gene026763:CDS
CAGCATCTTCAGGAGTTTCT+GGG 0.410189 4.1:-85444301 None:intergenic
TGCAAAGCACCAATGTCTTC+AGG 0.412451 4.1:-85444479 None:intergenic
ATTGCAGCACCTGGAAAGTT+AGG 0.413190 4.1:-85444032 None:intergenic
AAACTTACCTATCATCATCT+TGG 0.413744 4.1:-85444852 None:intergenic
TGATGGCGGTAGCATCATTC+AGG 0.414188 4.1:+85443812 MS.gene026763:CDS
CCTGAAGATGCTGCGAGAGC+TGG 0.415758 4.1:+85444311 MS.gene026763:CDS
ATTCAAAGCGCTAAATTTCC+TGG 0.415896 4.1:+85443351 MS.gene026763:CDS
ATGGCACAAATTCATCTTCA+TGG 0.419518 4.1:+85441869 MS.gene026763:CDS
CCAGATTGCTGACAAATATT+GGG 0.419715 4.1:+85445215 MS.gene026763:CDS
TGATCATCCGGAAATGTTAC+CGG 0.420713 4.1:-85444221 None:intergenic
CAGCAATCTGGTTCACCTTA+CGG 0.421232 4.1:-85445203 None:intergenic
GGGACACCCTCTGGCCACAT+TGG 0.421738 4.1:-85444581 None:intergenic
GGACACCCTCTGGCCACATT+GGG 0.423065 4.1:-85444580 None:intergenic
TTCCATGTCTCGTGATCATC+CGG 0.424135 4.1:-85444233 None:intergenic
ATTGAAAATCAGTATTTCCT+TGG 0.426891 4.1:+85444422 MS.gene026763:CDS
CATGAAACGTCGGGACTGTT+GGG 0.428061 4.1:-85444816 None:intergenic
CAGCTGTTTAGATCTATTGA+TGG 0.430877 4.1:+85444260 MS.gene026763:CDS
GATGTACAAGGATATCGTTC+TGG 0.435578 4.1:+85444658 MS.gene026763:CDS
GTTCATACCAAGATGATGAT+AGG 0.435880 4.1:+85444845 MS.gene026763:CDS
TCTTCGAACCCTCTTGTATC+GGG 0.436117 4.1:-85443272 None:intergenic
CGCTTATCCGACCTTCCACC+AGG 0.436478 4.1:-85443897 None:intergenic
TCCGGAAATGTTACCGGGGA+TGG 0.438701 4.1:-85444215 None:intergenic
AGCTAAATGGTAGGGCTGAT+AGG 0.439308 4.1:-85445070 None:intergenic
TCTTAAGTGAAAGTTCCTTT+GGG 0.441263 4.1:-85444508 None:intergenic
TGTTTAGATCTATTGATGGT+GGG 0.446034 4.1:+85444264 MS.gene026763:CDS
TCATGAAACGTCGGGACTGT+TGG 0.446105 4.1:-85444817 None:intergenic
CTGTCTTGCAGCTAAATGGT+AGG 0.447434 4.1:-85445079 None:intergenic
GACATTCATTCCCGCCTTGA+AGG 0.449178 4.1:+85444086 MS.gene026763:CDS
ATCTTCGAACCCTCTTGTAT+CGG 0.455754 4.1:-85443273 None:intergenic
AAACACATGATATACATTAC+CGG 0.460467 4.1:+85443537 MS.gene026763:CDS
GCACTTTCTGGGACACCCTC+TGG 0.462871 4.1:-85444590 None:intergenic
AAAGTCTAGTGAAGGTGTTA+GGG 0.463222 4.1:+85443650 MS.gene026763:CDS
GAAACCGCACAGTTCTTTGA+AGG 0.467829 4.1:+85443750 MS.gene026763:CDS
GATTCTAGGAGGCCAAAGGC+TGG 0.467985 4.1:+85443594 MS.gene026763:CDS
GCCGCCGAGAATCCGAGCCT+TGG 0.470752 4.1:-85445358 None:intergenic
TGTTTATACCGAAATTTCCT+TGG 0.471207 4.1:+85443566 MS.gene026763:CDS
TATCCGGCACATGAGAATCT+TGG 0.471426 4.1:-85443425 None:intergenic
ATGATGCTACCGCCATCATC+AGG 0.471464 4.1:-85443807 None:intergenic
GCGAGAGCTGGGCTTATTAG+TGG 0.471776 4.1:+85444323 MS.gene026763:CDS
CACTTGCTTCGCTATCCGAT+TGG 0.472419 4.1:+85445279 MS.gene026763:CDS
TCACCAGAAGATTGTGGTTG+TGG 0.472585 4.1:+85443863 MS.gene026763:CDS
GCTCTCTCGTAATCTGAATC+AGG 0.473696 4.1:-85444794 None:intergenic
AAGCTTAATGCTGGTGGTGG+TGG 0.475675 4.1:+85441923 MS.gene026763:CDS
TTCGGTATAAACAGACCAAC+CGG 0.477585 4.1:-85443556 None:intergenic
AACTAAGTAGTGAGGATAGG+AGG 0.480878 4.1:-85445396 None:intergenic
ATTCTAGGAGGCCAAAGGCT+GGG 0.483116 4.1:+85443595 MS.gene026763:CDS
CTGAAGATGCTGCGAGAGCT+GGG 0.483144 4.1:+85444312 MS.gene026763:CDS
TTATGAGCCTCATCGGTGTT+GGG 0.483969 4.1:+85443485 MS.gene026763:CDS
CCTTGAAGGACCGATCGCTT+GGG 0.484290 4.1:+85444100 MS.gene026763:CDS
CTCACAGAGGAAAGGATGTA+AGG 0.488198 4.1:+85443392 MS.gene026763:CDS
CTTATGAGCCTCATCGGTGT+TGG 0.488671 4.1:+85443484 MS.gene026763:CDS
CCCAAGCGATCGGTCCTTCA+AGG 0.490151 4.1:-85444100 None:intergenic
TTACCAAGATTCTCATGTGC+CGG 0.490601 4.1:+85443422 MS.gene026763:CDS
TCAGGTTCTGGTTGTTCAGA+AGG 0.491713 4.1:-85444776 None:intergenic
GGAGATGTCACACAGCTGCC+TGG 0.492596 4.1:+85445315 MS.gene026763:CDS
CCAGGTGCTGCAATCACAAA+AGG 0.496013 4.1:+85444041 MS.gene026763:CDS
CCATTCAAGACCTCCTCGAC+AGG 0.496478 4.1:-85443204 None:intergenic
CATTGATCTTTGGTTGATGT+TGG 0.498653 4.1:-85445013 None:intergenic
AGGATATCGTTCTGGCACTC+AGG 0.498950 4.1:+85444666 MS.gene026763:CDS
TACCGAAATTTCCTTGGTGA+GGG 0.498969 4.1:+85443572 MS.gene026763:CDS
TTCTATTATTCCTCCATCCC+CGG 0.504693 4.1:+85444202 MS.gene026763:CDS
CTGTTTAGATCTATTGATGG+TGG 0.506397 4.1:+85444263 MS.gene026763:CDS
ATTATGAGTAAGATTGAAGC+CGG 0.506694 4.1:+85444530 MS.gene026763:CDS
CAATCACAAAAGGCGGTCCA+AGG 0.512335 4.1:+85444051 MS.gene026763:CDS
CGTTCTGGCACTCAGGGCAA+AGG 0.513948 4.1:+85444673 MS.gene026763:CDS
CCTTCACTAGCAACTCCAAT+CGG 0.513962 4.1:-85445294 None:intergenic
GAAACTGTTGGTCTTGGAAA+GGG 0.514436 4.1:+85442985 MS.gene026763:CDS
GATCATCCGGAAATGTTACC+GGG 0.516686 4.1:-85444220 None:intergenic
TGGTGAGGAAATTGATAGGT+GGG 0.528326 4.1:+85443224 MS.gene026763:CDS
AAGCAATATTGGACTGGCAG+AGG 0.531832 4.1:+85444621 MS.gene026763:CDS
AACATAGATCATGAAACGTC+GGG 0.533395 4.1:-85444825 None:intergenic
ATGTCATGCCAAGGTTCCCT+TGG 0.535392 4.1:-85444068 None:intergenic
AGCGATCGGTCCTTCAAGGC+GGG 0.535565 4.1:-85444096 None:intergenic
GAGAATCCGAGCCTTGGTGT+CGG 0.538506 4.1:-85445352 None:intergenic
TCCAAGCAAAAGAGCTTCCA+AGG 0.539099 4.1:-85444439 None:intergenic
TAAGTCTTGCCACCAGAAAG+TGG 0.539707 4.1:-85443465 None:intergenic
CCATGGACTTGACCACGTGC+TGG 0.539957 4.1:-85445102 None:intergenic
TATTTGACGTTCTTCTGCCT+CGG 0.540130 4.1:+85444719 MS.gene026763:CDS
AAGAAAGTATACGGAACTCC+AGG 0.540377 4.1:-85443369 None:intergenic
GTTTAGATCTATTGATGGTG+GGG 0.540703 4.1:+85444265 MS.gene026763:CDS
CAAAATATTGCAGCTTCACA+TGG 0.543780 4.1:-85443296 None:intergenic
TCTTGCCTTCTCCAAATCAA+TGG 0.546831 4.1:-85443028 None:intergenic
TGATTTGGAGAAGGCAAGAG+TGG 0.552030 4.1:+85443032 MS.gene026763:CDS
AAGGCGGTCCAAGGGAACCT+TGG 0.552221 4.1:+85444060 MS.gene026763:CDS
GTGAAAGATGATAATCCTGT+TGG 0.552822 4.1:+85443153 MS.gene026763:CDS
CCAGCACGTGGTCAAGTCCA+TGG 0.552842 4.1:+85445102 MS.gene026763:CDS
ATGAGCATACTAATCCCAAA+TGG 0.553693 4.1:+85443076 MS.gene026763:CDS
GTTCTGGCACTCAGGGCAAA+GGG 0.553846 4.1:+85444674 MS.gene026763:CDS
TGCTACCATTGATTTGGAGA+AGG 0.554396 4.1:+85443023 MS.gene026763:CDS
GGATTTACTTGTCTCTCTAA+GGG 0.554563 4.1:+85444169 MS.gene026763:CDS
CAAAACATTGAGGAAACTGT+TGG 0.557099 4.1:+85442973 MS.gene026763:CDS
GGAAACTGTTGGTCTTGGAA+AGG 0.558000 4.1:+85442984 MS.gene026763:CDS
CCAAACTAAGTAGTGAGGAT+AGG 0.559043 4.1:-85445399 None:intergenic
CAACATCAACCAAAGATCAA+TGG 0.560182 4.1:+85445014 MS.gene026763:CDS
TGAATGGTGAGGAAATTGAT+AGG 0.560352 4.1:+85443220 MS.gene026763:CDS
TTCCGGATGATCACGAGACA+TGG 0.561317 4.1:+85444231 MS.gene026763:CDS
GATATTAAGCCTGAAGACAT+TGG 0.562253 4.1:+85444470 MS.gene026763:CDS
TCTTCATGCTACTATCTATG+AGG 0.563357 4.1:+85441895 MS.gene026763:CDS
GATGACGAATACATAATCGT+TGG 0.564804 4.1:+85444985 MS.gene026763:CDS
ATACCGAAATTTCCTTGGTG+AGG 0.565309 4.1:+85443571 MS.gene026763:CDS
AACGATGGAGGAAGCAAGGT+GGG 0.565356 4.1:+85444144 MS.gene026763:CDS
AAAGACCGCAGCTGGGCTCG+AGG 0.565566 4.1:+85443327 MS.gene026763:CDS
GGATATCGTTCTGGCACTCA+GGG 0.565745 4.1:+85444667 MS.gene026763:CDS
CGGTTCAAGCAATATTGGAC+TGG 0.566255 4.1:+85444615 MS.gene026763:CDS
TTATGAGTAAGATTGAAGCC+GGG 0.567721 4.1:+85444531 MS.gene026763:CDS
AAGTAGTGAGGATAGGAGGG+AGG 0.571376 4.1:-85445392 None:intergenic
TGGGATGATAGAACATCGGT+TGG 0.573109 4.1:+85443687 MS.gene026763:CDS
TGTCTTGCAGCTAAATGGTA+GGG 0.573776 4.1:-85445078 None:intergenic
CCGCCATCATCAGGATTGCG+GGG 0.573969 4.1:-85443798 None:intergenic
ACTTTCTTCTCACAGAGGAA+AGG 0.574250 4.1:+85443384 MS.gene026763:CDS
TACTCATCACCAGAAGATTG+TGG 0.574698 4.1:+85443857 MS.gene026763:CDS
GATAAGCTTAATGCTGGTGG+TGG 0.575966 4.1:+85441920 MS.gene026763:CDS
GAATGCCTCGAGCCCAGCTG+CGG 0.576491 4.1:-85443332 None:intergenic
TACCGCCATCATCAGGATTG+CGG 0.579693 4.1:-85443800 None:intergenic
ACTAAGTAGTGAGGATAGGA+GGG 0.580152 4.1:-85445395 None:intergenic
GGATAGCGAAGCAAGTGTCC+AGG 0.581630 4.1:-85445273 None:intergenic
CCTGTCGAGGAGGTCTTGAA+TGG 0.582151 4.1:+85443204 MS.gene026763:CDS
AGCTGGGCTTATTAGTGGAA+AGG 0.583055 4.1:+85444328 MS.gene026763:CDS
TGCTTTGCATCTCATCCCAA+AGG 0.583132 4.1:+85444493 MS.gene026763:CDS
GAATCCGAGCCTTGGTGTCG+GGG 0.583277 4.1:-85445350 None:intergenic
GCAAGACTTATGAGCCTCAT+CGG 0.583714 4.1:+85443478 MS.gene026763:CDS
TAGGTTGATGAAAATCATCA+TGG 0.587769 4.1:-85444013 None:intergenic
ACAGATCAGGCAAAACATTG+AGG 0.589416 4.1:+85442963 MS.gene026763:intron
AAAGATCAATGGACGGAGCG+AGG 0.593749 4.1:+85445025 MS.gene026763:CDS
GAGGGACTCTGAGATAGCGA+TGG 0.594266 4.1:+85445044 MS.gene026763:CDS
ATGGAGGAAGCAAGGTGGGA+AGG 0.595810 4.1:+85444148 MS.gene026763:CDS
GGAAATGTTACCGGGGATGG+AGG 0.599535 4.1:-85444212 None:intergenic
AGGGACTCTGAGATAGCGAT+GGG 0.600455 4.1:+85445045 MS.gene026763:CDS
GAGGTTGATAAGCTTAATGC+TGG 0.603431 4.1:+85441914 MS.gene026763:CDS
AAATCAAGAATGTATCCGTA+AGG 0.604233 4.1:+85445188 MS.gene026763:CDS
ACATGATATACATTACCGGT+TGG 0.606826 4.1:+85443541 MS.gene026763:CDS
CCGATTGGAGTTGCTAGTGA+AGG 0.611060 4.1:+85445294 MS.gene026763:CDS
TATGAGTAAGATTGAAGCCG+GGG 0.612358 4.1:+85444532 MS.gene026763:CDS
CCTTGGTGAGGGATTCTAGG+AGG 0.613168 4.1:+85443583 MS.gene026763:CDS
AAGATCAATGGACGGAGCGA+GGG 0.613208 4.1:+85445026 MS.gene026763:CDS
TGTTTAACTTTGAGCAACGA+TGG 0.613445 4.1:+85444129 MS.gene026763:CDS
CGGGAATGAATGTCATGCCA+AGG 0.614171 4.1:-85444077 None:intergenic
AACAACACATCCCAAGCGAT+CGG 0.615121 4.1:-85444110 None:intergenic
GATTTGGAGAAGGCAAGAGT+GGG 0.615789 4.1:+85443033 MS.gene026763:CDS
AATCACAAAAGGCGGTCCAA+GGG 0.616469 4.1:+85444052 MS.gene026763:CDS
TGGTGGAAATTTCCTCAGCA+TGG 0.616523 4.1:+85441940 MS.gene026763:CDS
GAGCAACGATGGAGGAAGCA+AGG 0.617826 4.1:+85444140 MS.gene026763:CDS
TGAATTACCTGGTGGAAGGT+CGG 0.619368 4.1:+85443890 MS.gene026763:CDS
CGCCATCATCAGGATTGCGG+GGG 0.619690 4.1:-85443797 None:intergenic
TGGAGAAGGCAAGAGTGGGA+AGG 0.621315 4.1:+85443037 MS.gene026763:CDS
AGGGAATCGAGGAAGATCCT+CGG 0.622355 4.1:+85444693 MS.gene026763:CDS
TCTAGGAGGCCAAAGGCTGG+GGG 0.624607 4.1:+85443597 MS.gene026763:CDS
AGCATATGTGCCTGTCGAGG+AGG 0.627896 4.1:+85443194 MS.gene026763:CDS
AACAATGGAGATGATGTACA+AGG 0.631124 4.1:+85444646 MS.gene026763:CDS
GAACATAGATCATGAAACGT+CGG 0.633210 4.1:-85444826 None:intergenic
TGTTGTCCCAATGTGGCCAG+AGG 0.634138 4.1:+85444574 MS.gene026763:CDS
GAGGGATTCTAGGAGGCCAA+AGG 0.637811 4.1:+85443590 MS.gene026763:CDS
CTTCTGGTGATGAGTAAACA+TGG 0.641961 4.1:-85443850 None:intergenic
CGAGGAGGTCTTGAATGGTG+AGG 0.642464 4.1:+85443209 MS.gene026763:CDS
TGAGGAAATTGATAGGTGGG+TGG 0.645001 4.1:+85443227 MS.gene026763:CDS
GCATTATGGTATGAGCACCT+TGG 0.646788 4.1:+85445135 MS.gene026763:CDS
TGAGCCTCATCGGTGTTGGG+AGG 0.651132 4.1:+85443488 MS.gene026763:CDS
AGGAGTCATGAAGCATGCCA+AGG 0.651697 4.1:-85445152 None:intergenic
GTTGTCCCAATGTGGCCAGA+GGG 0.653005 4.1:+85444575 MS.gene026763:CDS
AAGAGCATATGTGCCTGTCG+AGG 0.653021 4.1:+85443191 MS.gene026763:CDS
AATCGGGAAGTAAAGAAACA+AGG 0.653307 4.1:+85444743 MS.gene026763:CDS
TATCATATCTTCCATCACAA+AGG 0.653464 4.1:-85443950 None:intergenic
ATCAACCAAAGATCAATGGA+CGG 0.654662 4.1:+85445018 MS.gene026763:CDS
CGTATACTTTCTTCTCACAG+AGG 0.655571 4.1:+85443379 MS.gene026763:CDS
AGCGAAGCAAGTGTCCAGGA+AGG 0.657401 4.1:-85445269 None:intergenic
AATAAAACAGTACCATGCTG+AGG 0.661732 4.1:-85441952 None:intergenic
ACAGTGAATTACCTGGTGGA+AGG 0.662406 4.1:+85443886 MS.gene026763:CDS
GGGTGTCCCAGAAAGTGCAT+CGG 0.663109 4.1:+85444595 MS.gene026763:CDS
CAACGATGGAGGAAGCAAGG+TGG 0.668752 4.1:+85444143 MS.gene026763:CDS
AAGAACGTCAAATAATTCCG+AGG 0.670151 4.1:-85444710 None:intergenic
AAGCGATCGGTCCTTCAAGG+CGG 0.671322 4.1:-85444097 None:intergenic
GGTGCTGCAATCACAAAAGG+CGG 0.672665 4.1:+85444044 MS.gene026763:CDS
ACTCAGGGCAAAGGGAATCG+AGG 0.672681 4.1:+85444682 MS.gene026763:CDS
ATGGTGAGGAAATTGATAGG+TGG 0.675988 4.1:+85443223 MS.gene026763:CDS
CCCCGCAATCCTGATGATGG+CGG 0.678364 4.1:+85443798 MS.gene026763:CDS
TCTTTACTTCCCGATTACCG+AGG 0.680953 4.1:-85444736 None:intergenic
ATATCCTCCCAACACCGATG+AGG 0.682280 4.1:-85443492 None:intergenic
TGTTTGGGATGATAGAACAT+CGG 0.683265 4.1:+85443683 MS.gene026763:CDS
GCTGCAAGACAGCCAGCACG+TGG 0.687862 4.1:+85445090 MS.gene026763:CDS
TGTCACGAAAGACCGCAGCT+GGG 0.688731 4.1:+85443320 MS.gene026763:CDS
GTTGATAAGCTTAATGCTGG+TGG 0.689428 4.1:+85441917 MS.gene026763:CDS
ACCAAGGCTCGGATTCTCGG+CGG 0.691037 4.1:+85445357 MS.gene026763:CDS
ATAATGCCATGCGAAAACCA+TGG 0.691651 4.1:-85445119 None:intergenic
CCTAAAATACCACTTTCTGG+TGG 0.698637 4.1:+85443456 MS.gene026763:CDS
GTTGTGGACAGTGAATTACC+TGG 0.700680 4.1:+85443879 MS.gene026763:CDS
TATACGTTGTTGTCCCAATG+TGG 0.700729 4.1:+85444567 MS.gene026763:CDS
ATCATCCGGAAATGTTACCG+GGG 0.705073 4.1:-85444219 None:intergenic
TTAACTTTGAGCAACGATGG+AGG 0.710551 4.1:+85444132 MS.gene026763:CDS
CCTCCTAGAATCCCTCACCA+AGG 0.715713 4.1:-85443583 None:intergenic
GGACTGGCAGAGGAGAACAA+TGG 0.727822 4.1:+85444631 MS.gene026763:CDS
AGTACCTTCAAAGAACTGTG+CGG 0.748352 4.1:-85443754 None:intergenic
CTGGTGATGAGTAAACATGG+TGG 0.787330 4.1:-85443847 None:intergenic
GTGGACAGTGAATTACCTGG+TGG 0.811877 4.1:+85443882 MS.gene026763:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACTGTTTTATTTAATTATTT+TGG + chr4.1:85441964-85441983 MS.gene026763:intron 10.0%
!! ATAAGTATAAGCAAATAAAT+AGG - chr4.1:85442943-85442962 None:intergenic 15.0%
!! TAAGTATAAGCAAATAAATA+GGG - chr4.1:85442942-85442961 None:intergenic 15.0%
!!! AAAAAAAAAGAATATTTTGG+TGG + chr4.1:85442094-85442113 MS.gene026763:intron 15.0%
!!! ATTTTTAGATTTCATGTTTT+TGG + chr4.1:85442013-85442032 MS.gene026763:intron 15.0%
!! AAATTACTGTCATAAATTAC+AGG + chr4.1:85444877-85444896 MS.gene026763:intron 20.0%
!! ATGCTTATATTAATGCTATT+CGG + chr4.1:85444378-85444397 MS.gene026763:CDS 20.0%
!! TAATATTGACAATTAACCAA+CGG - chr4.1:85442337-85442356 None:intergenic 20.0%
!!! TTTAATTATTTTGGCCTATT+TGG + chr4.1:85441973-85441992 MS.gene026763:intron 20.0%
! AAACACATGATATACATTAC+CGG + chr4.1:85443537-85443556 MS.gene026763:CDS 25.0%
! AAACGCAAAACTAAAGAAAT+TGG - chr4.1:85442893-85442912 None:intergenic 25.0%
! AATAGGGTCATTAATAATGA+AGG - chr4.1:85442926-85442945 None:intergenic 25.0%
! AATATTGACAATTAACCAAC+GGG - chr4.1:85442336-85442355 None:intergenic 25.0%
! ATTGAAAATCAGTATTTCCT+TGG + chr4.1:85444422-85444441 MS.gene026763:CDS 25.0%
! GATAAAGTTAATGGTTATTC+AGG - chr4.1:85442651-85442670 None:intergenic 25.0%
! GATGCATAAGATAAAGTTAA+TGG - chr4.1:85442660-85442679 None:intergenic 25.0%
! TGTTTATACATACATTGACA+TGG + chr4.1:85442853-85442872 MS.gene026763:intron 25.0%
! TTGAATCATTAGATCCAAAT+AGG - chr4.1:85441990-85442009 None:intergenic 25.0%
!!! AAAAAAGAATATTTTGGTGG+TGG + chr4.1:85442097-85442116 MS.gene026763:intron 25.0%
!!! AAAAAGAATATTTTGGTGGT+GGG + chr4.1:85442098-85442117 MS.gene026763:intron 25.0%
!!! ATATCAGTTTTGTCAAATGT+CGG + chr4.1:85442373-85442392 MS.gene026763:intron 25.0%
!!! ATTTTAGGGATGAAATTATC+CGG - chr4.1:85443444-85443463 None:intergenic 25.0%
!!! TAATTTGCTTGATTTAGCTT+TGG - chr4.1:85442819-85442838 None:intergenic 25.0%
AAACTTACCTATCATCATCT+TGG - chr4.1:85444855-85444874 None:intergenic 30.0%
AAAGCAAAATCCAATGAGTA+AGG - chr4.1:85442735-85442754 None:intergenic 30.0%
AAATCAAGAATGTATCCGTA+AGG + chr4.1:85445188-85445207 MS.gene026763:CDS 30.0%
ATCTTAAGTGAAAGTTCCTT+TGG - chr4.1:85444512-85444531 None:intergenic 30.0%
ATTATGAGTAAGATTGAAGC+CGG + chr4.1:85444530-85444549 MS.gene026763:CDS 30.0%
CTAAAGAAAAAGTCTAGTGA+AGG + chr4.1:85443642-85443661 MS.gene026763:CDS 30.0%
TACATTGCACATACATACAT+AGG + chr4.1:85442770-85442789 MS.gene026763:intron 30.0%
TATCATATCTTCCATCACAA+AGG - chr4.1:85443953-85443972 None:intergenic 30.0%
TCTTAAGTGAAAGTTCCTTT+GGG - chr4.1:85444511-85444530 None:intergenic 30.0%
TGCTTATACTTATACAGATC+AGG + chr4.1:85442950-85442969 MS.gene026763:intron 30.0%
TGTTTATACCGAAATTTCCT+TGG + chr4.1:85443566-85443585 MS.gene026763:CDS 30.0%
! ATTCTTGATTTTCTGGATGA+AGG - chr4.1:85445179-85445198 None:intergenic 30.0%
! GTATATCATGTGTTTTGCAT+TGG - chr4.1:85443532-85443551 None:intergenic 30.0%
! TGTTTAGATCTATTGATGGT+GGG + chr4.1:85444264-85444283 MS.gene026763:CDS 30.0%
! TTGGATTTTGCTTTCGTTAT+TGG + chr4.1:85442741-85442760 MS.gene026763:intron 30.0%
!! TAGGTTGATGAAAATCATCA+TGG - chr4.1:85444016-85444035 None:intergenic 30.0%
!! TGATTTAGCTTTGGTTATTC+AGG - chr4.1:85442810-85442829 None:intergenic 30.0%
!!! AAAAGAATATTTTGGTGGTG+GGG + chr4.1:85442099-85442118 MS.gene026763:intron 30.0%
!!! AAGAATTGTGAGTTTTGTTG+GGG + chr4.1:85443920-85443939 MS.gene026763:CDS 30.0%
!!! GAAGAATTGTGAGTTTTGTT+GGG + chr4.1:85443919-85443938 MS.gene026763:CDS 30.0%
AACAATGGAGATGATGTACA+AGG + chr4.1:85444646-85444665 MS.gene026763:CDS 35.0%
AACATAGATCATGAAACGTC+GGG - chr4.1:85444828-85444847 None:intergenic 35.0%
AAGAACGTCAAATAATTCCG+AGG - chr4.1:85444713-85444732 None:intergenic 35.0%
AATAAAACAGTACCATGCTG+AGG - chr4.1:85441955-85441974 None:intergenic 35.0%
AATCGGGAAGTAAAGAAACA+AGG + chr4.1:85444743-85444762 MS.gene026763:CDS 35.0%
ACATGATATACATTACCGGT+TGG + chr4.1:85443541-85443560 MS.gene026763:CDS 35.0%
ACCAGATTGCTGACAAATAT+TGG + chr4.1:85445214-85445233 MS.gene026763:CDS 35.0%
AGGATTTACTTGTCTCTCTA+AGG + chr4.1:85444168-85444187 MS.gene026763:CDS 35.0%
ATCAACCAAAGATCAATGGA+CGG + chr4.1:85445018-85445037 MS.gene026763:CDS 35.0%
ATCCCTAAAATACCACTTTC+TGG + chr4.1:85443453-85443472 MS.gene026763:CDS 35.0%
ATGAGCATACTAATCCCAAA+TGG + chr4.1:85443076-85443095 MS.gene026763:CDS 35.0%
ATGGCACAAATTCATCTTCA+TGG + chr4.1:85441869-85441888 MS.gene026763:CDS 35.0%
CAAAACATTGAGGAAACTGT+TGG + chr4.1:85442973-85442992 MS.gene026763:CDS 35.0%
CAAAATATTGCAGCTTCACA+TGG - chr4.1:85443299-85443318 None:intergenic 35.0%
CAACATCAACCAAAGATCAA+TGG + chr4.1:85445014-85445033 MS.gene026763:CDS 35.0%
CACAAAGTAGTTTCAATCGA+AGG - chr4.1:85442608-85442627 None:intergenic 35.0%
CAGCTGTTTAGATCTATTGA+TGG + chr4.1:85444260-85444279 MS.gene026763:CDS 35.0%
CATCTGTTACAAATTAGGCA+TGG - chr4.1:85442434-85442453 None:intergenic 35.0%
CCAGATTGCTGACAAATATT+GGG + chr4.1:85445215-85445234 MS.gene026763:CDS 35.0%
CTGTTTAGATCTATTGATGG+TGG + chr4.1:85444263-85444282 MS.gene026763:CDS 35.0%
GAAAAAAACCCGATACAAGA+GGG + chr4.1:85443264-85443283 MS.gene026763:CDS 35.0%
GAACATAGATCATGAAACGT+CGG - chr4.1:85444829-85444848 None:intergenic 35.0%
GATATTAAGCCTGAAGACAT+TGG + chr4.1:85444470-85444489 MS.gene026763:CDS 35.0%
GATGACGAATACATAATCGT+TGG + chr4.1:85444985-85445004 MS.gene026763:CDS 35.0%
GGATTTACTTGTCTCTCTAA+GGG + chr4.1:85444169-85444188 MS.gene026763:CDS 35.0%
GTGAAAGATGATAATCCTGT+TGG + chr4.1:85443153-85443172 MS.gene026763:CDS 35.0%
GTTCATACCAAGATGATGAT+AGG + chr4.1:85444845-85444864 MS.gene026763:CDS 35.0%
TCACATTTACTGTGCTCATA+TGG + chr4.1:85443110-85443129 MS.gene026763:CDS 35.0%
TCTTCATGCTACTATCTATG+AGG + chr4.1:85441895-85441914 MS.gene026763:CDS 35.0%
TGAAAAAAACCCGATACAAG+AGG + chr4.1:85443263-85443282 MS.gene026763:CDS 35.0%
TGAAAAGACTCGTACCATTT+GGG - chr4.1:85443093-85443112 None:intergenic 35.0%
TGAATGGTGAGGAAATTGAT+AGG + chr4.1:85443220-85443239 MS.gene026763:CDS 35.0%
TTATGAGTAAGATTGAAGCC+GGG + chr4.1:85444531-85444550 MS.gene026763:CDS 35.0%
TTTCATCAACCTAACTTTCC+AGG + chr4.1:85444023-85444042 MS.gene026763:CDS 35.0%
! ACTCTATGCTACCATTGATT+TGG + chr4.1:85443017-85443036 MS.gene026763:CDS 35.0%
! ATTCAAAGCGCTAAATTTCC+TGG + chr4.1:85443351-85443370 MS.gene026763:CDS 35.0%
! CACCAGAAAGTGGTATTTTA+GGG - chr4.1:85443458-85443477 None:intergenic 35.0%
! CATGCCTAATTTGTAACAGA+TGG + chr4.1:85442432-85442451 MS.gene026763:intron 35.0%
! CATTGATCTTTGGTTGATGT+TGG - chr4.1:85445016-85445035 None:intergenic 35.0%
! CCTAATTTGTAACAGATGGT+GGG + chr4.1:85442436-85442455 MS.gene026763:intron 35.0%
! CGGATACATTCTTGATTTTC+TGG - chr4.1:85445186-85445205 None:intergenic 35.0%
! CTAATTTGTAACAGATGGTG+GGG + chr4.1:85442437-85442456 MS.gene026763:intron 35.0%
! CTCTGTGAGAAGAAAGTATA+CGG - chr4.1:85443381-85443400 None:intergenic 35.0%
! TGTTTAACTTTGAGCAACGA+TGG + chr4.1:85444129-85444148 MS.gene026763:CDS 35.0%
! TGTTTGGGATGATAGAACAT+CGG + chr4.1:85443683-85443702 MS.gene026763:CDS 35.0%
! TTGATTTTCTGGATGAAGGA+AGG - chr4.1:85445175-85445194 None:intergenic 35.0%
! TTTAAGGTGGCTCAAAATGA+CGG + chr4.1:85442469-85442488 MS.gene026763:intron 35.0%
!! AAAAGTCTAGTGAAGGTGTT+AGG + chr4.1:85443649-85443668 MS.gene026763:CDS 35.0%
!! AAAGTCTAGTGAAGGTGTTA+GGG + chr4.1:85443650-85443669 MS.gene026763:CDS 35.0%
!! ATCGGTTGGTTTGTTGAAAA+AGG + chr4.1:85443701-85443720 MS.gene026763:CDS 35.0%
!! CAAGAGTTCTAAAAAGTGAG+TGG - chr4.1:85443983-85444002 None:intergenic 35.0%
!! CGAAGAATTGTGAGTTTTGT+TGG + chr4.1:85443918-85443937 MS.gene026763:CDS 35.0%
!! GTTCTAAAAAGTGAGTGGAA+TGG - chr4.1:85443978-85443997 None:intergenic 35.0%
!! GTTGAAAAAGGATGGATTGA+TGG + chr4.1:85443713-85443732 MS.gene026763:CDS 35.0%
!! GTTGGTTTGTTGAAAAAGGA+TGG + chr4.1:85443705-85443724 MS.gene026763:CDS 35.0%
!! GTTTAGATCTATTGATGGTG+GGG + chr4.1:85444265-85444284 MS.gene026763:CDS 35.0%
!! TAGGGTTTTGATGCTTGTTT+GGG + chr4.1:85443668-85443687 MS.gene026763:CDS 35.0%
!! TTAGGGTTTTGATGCTTGTT+TGG + chr4.1:85443667-85443686 MS.gene026763:CDS 35.0%
!!! AGAATTGTGAGTTTTGTTGG+GGG + chr4.1:85443921-85443940 MS.gene026763:CDS 35.0%
ACAGATCAGGCAAAACATTG+AGG + chr4.1:85442963-85442982 MS.gene026763:intron 40.0%
ACAGATCCTAAAAGCAAGCA+GGG - chr4.1:85442147-85442166 None:intergenic 40.0%
ACTTTCTTCTCACAGAGGAA+AGG + chr4.1:85443384-85443403 MS.gene026763:CDS 40.0%
AGTACCTTCAAAGAACTGTG+CGG - chr4.1:85443757-85443776 None:intergenic 40.0%
ATAATGCCATGCGAAAACCA+TGG - chr4.1:85445122-85445141 None:intergenic 40.0%
ATACCGAAATTTCCTTGGTG+AGG + chr4.1:85443571-85443590 MS.gene026763:CDS 40.0%
ATCCCTCACCAAGGAAATTT+CGG - chr4.1:85443577-85443596 None:intergenic 40.0%
ATCTTCGAACCCTCTTGTAT+CGG - chr4.1:85443276-85443295 None:intergenic 40.0%
ATGGTGAGGAAATTGATAGG+TGG + chr4.1:85443223-85443242 MS.gene026763:CDS 40.0%
CCCAATATTTGTCAGCAATC+TGG - chr4.1:85445218-85445237 None:intergenic 40.0%
CCCACCATCTGTTACAAATT+AGG - chr4.1:85442439-85442458 None:intergenic 40.0%
CCTAAAATACCACTTTCTGG+TGG + chr4.1:85443456-85443475 MS.gene026763:CDS 40.0%
CCTGTTGGAGCAACTTTAAT+CGG + chr4.1:85443168-85443187 MS.gene026763:CDS 40.0%
CGTATACTTTCTTCTCACAG+AGG + chr4.1:85443379-85443398 MS.gene026763:CDS 40.0%
GATGTACAAGGATATCGTTC+TGG + chr4.1:85444658-85444677 MS.gene026763:CDS 40.0%
GTGAAAAGACTCGTACCATT+TGG - chr4.1:85443094-85443113 None:intergenic 40.0%
TACCGAAATTTCCTTGGTGA+GGG + chr4.1:85443572-85443591 MS.gene026763:CDS 40.0%
TACTCATCACCAGAAGATTG+TGG + chr4.1:85443857-85443876 MS.gene026763:CDS 40.0%
TATACGTTGTTGTCCCAATG+TGG + chr4.1:85444567-85444586 MS.gene026763:CDS 40.0%
TATGAGTAAGATTGAAGCCG+GGG + chr4.1:85444532-85444551 MS.gene026763:CDS 40.0%
TATTTGACGTTCTTCTGCCT+CGG + chr4.1:85444719-85444738 MS.gene026763:CDS 40.0%
TCGGGGAAAAATTCAAATCC+AGG - chr4.1:85445336-85445355 None:intergenic 40.0%
TCGTAATCTGAATCAGGTTC+TGG - chr4.1:85444791-85444810 None:intergenic 40.0%
TCTTGCCTTCTCCAAATCAA+TGG - chr4.1:85443031-85443050 None:intergenic 40.0%
TGATCATCCGGAAATGTTAC+CGG - chr4.1:85444224-85444243 None:intergenic 40.0%
TGGTGAGGAAATTGATAGGT+GGG + chr4.1:85443224-85443243 MS.gene026763:CDS 40.0%
TGTCTTGCAGCTAAATGGTA+GGG - chr4.1:85445081-85445100 None:intergenic 40.0%
TTAACTTTGAGCAACGATGG+AGG + chr4.1:85444132-85444151 MS.gene026763:CDS 40.0%
TTACAAATTAGGCATGGCAG+TGG - chr4.1:85442428-85442447 None:intergenic 40.0%
TTACCAAGATTCTCATGTGC+CGG + chr4.1:85443422-85443441 MS.gene026763:CDS 40.0%
TTCGGTATAAACAGACCAAC+CGG - chr4.1:85443559-85443578 None:intergenic 40.0%
TTCTATTATTCCTCCATCCC+CGG + chr4.1:85444202-85444221 MS.gene026763:CDS 40.0%
! AAGAAAGTATACGGAACTCC+AGG - chr4.1:85443372-85443391 None:intergenic 40.0%
! ATGGTTTTCGCATGGCATTA+TGG + chr4.1:85445121-85445140 MS.gene026763:CDS 40.0%
! ATTGAGGAAACTGTTGGTCT+TGG + chr4.1:85442979-85442998 MS.gene026763:CDS 40.0%
! CCACCAGAAAGTGGTATTTT+AGG - chr4.1:85443459-85443478 None:intergenic 40.0%
! CTTCTGGTGATGAGTAAACA+TGG - chr4.1:85443853-85443872 None:intergenic 40.0%
! GCCTAATTTGTAACAGATGG+TGG + chr4.1:85442435-85442454 MS.gene026763:intron 40.0%
! GTATACAGTGAACTTTTCCC+CGG - chr4.1:85444552-85444571 None:intergenic 40.0%
! GTTGATAAGCTTAATGCTGG+TGG + chr4.1:85441917-85441936 MS.gene026763:CDS 40.0%
! TCAGTGTTATCGATTGCAGA+TGG - chr4.1:85442520-85442539 None:intergenic 40.0%
! TGATAGGTGGGTGGAAATTT+TGG + chr4.1:85443236-85443255 MS.gene026763:CDS 40.0%
!! CATGTGTTTTGCATTGGTGA+TGG - chr4.1:85443526-85443545 None:intergenic 40.0%
!! GAAACTGTTGGTCTTGGAAA+GGG + chr4.1:85442985-85443004 MS.gene026763:CDS 40.0%
!! GAGGTTGATAAGCTTAATGC+TGG + chr4.1:85441914-85441933 MS.gene026763:CDS 40.0%
!! TGCATCGGTTCAAGCAATAT+TGG + chr4.1:85444610-85444629 MS.gene026763:CDS 40.0%
!! TGCTACCATTGATTTGGAGA+AGG + chr4.1:85443023-85443042 MS.gene026763:CDS 40.0%
AACAACACATCCCAAGCGAT+CGG - chr4.1:85444113-85444132 None:intergenic 45.0%
AAGTCTCATCACAGATTCGC+TGG - chr4.1:85442242-85442261 None:intergenic 45.0%
AATCACAAAAGGCGGTCCAA+GGG + chr4.1:85444052-85444071 MS.gene026763:CDS 45.0%
ACAGTGAATTACCTGGTGGA+AGG + chr4.1:85443886-85443905 MS.gene026763:CDS 45.0%
AGCTAAATGGTAGGGCTGAT+AGG - chr4.1:85445073-85445092 None:intergenic 45.0%
AGCTGGGCTTATTAGTGGAA+AGG + chr4.1:85444328-85444347 MS.gene026763:CDS 45.0%
ATCATCCGGAAATGTTACCG+GGG - chr4.1:85444222-85444241 None:intergenic 45.0%
ATTGCAGCACCTGGAAAGTT+AGG - chr4.1:85444035-85444054 None:intergenic 45.0%
CACAGATCCTAAAAGCAAGC+AGG - chr4.1:85442148-85442167 None:intergenic 45.0%
CAGCATCTTCAGGAGTTTCT+GGG - chr4.1:85444304-85444323 None:intergenic 45.0%
CCGATTAAAGTTGCTCCAAC+AGG - chr4.1:85443171-85443190 None:intergenic 45.0%
CCTTCACTAGCAACTCCAAT+CGG - chr4.1:85445297-85445316 None:intergenic 45.0%
CGGTTCAAGCAATATTGGAC+TGG + chr4.1:85444615-85444634 MS.gene026763:CDS 45.0%
CTCACAGAGGAAAGGATGTA+AGG + chr4.1:85443392-85443411 MS.gene026763:CDS 45.0%
CTGTCTTGCAGCTAAATGGT+AGG - chr4.1:85445082-85445101 None:intergenic 45.0%
CTTGAACCGATGCACTTTCT+GGG - chr4.1:85444604-85444623 None:intergenic 45.0%
GAAACCGCACAGTTCTTTGA+AGG + chr4.1:85443750-85443769 MS.gene026763:CDS 45.0%
GATAAGCTTAATGCTGGTGG+TGG + chr4.1:85441920-85441939 MS.gene026763:CDS 45.0%
GATCATCCGGAAATGTTACC+GGG - chr4.1:85444223-85444242 None:intergenic 45.0%
GATTTGGAGAAGGCAAGAGT+GGG + chr4.1:85443033-85443052 MS.gene026763:CDS 45.0%
GCAAGACTTATGAGCCTCAT+CGG + chr4.1:85443478-85443497 MS.gene026763:CDS 45.0%
GCATTATGGTATGAGCACCT+TGG + chr4.1:85445135-85445154 MS.gene026763:CDS 45.0%
GCTCTCTCGTAATCTGAATC+AGG - chr4.1:85444797-85444816 None:intergenic 45.0%
GGATCACTGATGCATCAAAG+TGG + chr4.1:85442120-85442139 MS.gene026763:intron 45.0%
GTTGTGGACAGTGAATTACC+TGG + chr4.1:85443879-85443898 MS.gene026763:CDS 45.0%
TAAGTCTTGCCACCAGAAAG+TGG - chr4.1:85443468-85443487 None:intergenic 45.0%
TATCCGGCACATGAGAATCT+TGG - chr4.1:85443428-85443447 None:intergenic 45.0%
TCACCAGAAGATTGTGGTTG+TGG + chr4.1:85443863-85443882 MS.gene026763:CDS 45.0%
TCCAAGCAAAAGAGCTTCCA+AGG - chr4.1:85444442-85444461 None:intergenic 45.0%
TCTTCGAACCCTCTTGTATC+GGG - chr4.1:85443275-85443294 None:intergenic 45.0%
TCTTTACTTCCCGATTACCG+AGG - chr4.1:85444739-85444758 None:intergenic 45.0%
TGAATTACCTGGTGGAAGGT+CGG + chr4.1:85443890-85443909 MS.gene026763:CDS 45.0%
TGAGCCACCTTAAAACTCCA+TGG - chr4.1:85442463-85442482 None:intergenic 45.0%
TGAGGAAATTGATAGGTGGG+TGG + chr4.1:85443227-85443246 MS.gene026763:CDS 45.0%
TGCTTTGCATCTCATCCCAA+AGG + chr4.1:85444493-85444512 MS.gene026763:CDS 45.0%
TGGGATGATAGAACATCGGT+TGG + chr4.1:85443687-85443706 MS.gene026763:CDS 45.0%
TGGTGGAAATTTCCTCAGCA+TGG + chr4.1:85441940-85441959 MS.gene026763:CDS 45.0%
TGTCCACAACCACAATCTTC+TGG - chr4.1:85443869-85443888 None:intergenic 45.0%
TTCCATGTCTCGTGATCATC+CGG - chr4.1:85444236-85444255 None:intergenic 45.0%
TTTCCTTGGTGAGGGATTCT+AGG + chr4.1:85443580-85443599 MS.gene026763:CDS 45.0%
! CAGCAATCTGGTTCACCTTA+CGG - chr4.1:85445206-85445225 None:intergenic 45.0%
! CCAACGGGTTTGCAAATGAT+CGG - chr4.1:85442321-85442340 None:intergenic 45.0%
! CTGGTGATGAGTAAACATGG+TGG - chr4.1:85443850-85443869 None:intergenic 45.0%
! GTGTTATCGATTGCAGATGG+CGG - chr4.1:85442517-85442536 None:intergenic 45.0%
! TCAAGTCCATGGTTTTCGCA+TGG + chr4.1:85445113-85445132 MS.gene026763:CDS 45.0%
! TCAGGTTCTGGTTGTTCAGA+AGG - chr4.1:85444779-85444798 None:intergenic 45.0%
! TCCTTGGAAGCTCTTTTGCT+TGG + chr4.1:85444438-85444457 MS.gene026763:CDS 45.0%
! TGAATTTTTCCCCGACACCA+AGG + chr4.1:85445341-85445360 MS.gene026763:CDS 45.0%
! TGATTTGGAGAAGGCAAGAG+TGG + chr4.1:85443032-85443051 MS.gene026763:CDS 45.0%
! TGCAAAGCACCAATGTCTTC+AGG - chr4.1:85444482-85444501 None:intergenic 45.0%
! TTATGAGCCTCATCGGTGTT+GGG + chr4.1:85443485-85443504 MS.gene026763:CDS 45.0%
!! AAGCAATATTGGACTGGCAG+AGG + chr4.1:85444621-85444640 MS.gene026763:CDS 45.0%
!! GGAAACTGTTGGTCTTGGAA+AGG + chr4.1:85442984-85443003 MS.gene026763:CDS 45.0%
!!! GGCTCAAAATGACGGACTTT+TGG + chr4.1:85442477-85442496 MS.gene026763:intron 45.0%
!!! AAAAAAAAAAAAGAATATTT+TGG + chr4.1:85442091-85442110 MS.gene026763:intron 5.0%
AAAGATCAATGGACGGAGCG+AGG + chr4.1:85445025-85445044 MS.gene026763:CDS 50.0%
AACGATGGAGGAAGCAAGGT+GGG + chr4.1:85444144-85444163 MS.gene026763:CDS 50.0%
AAGATCAATGGACGGAGCGA+GGG + chr4.1:85445026-85445045 MS.gene026763:CDS 50.0%
AAGTAGTGAGGATAGGAGGG+AGG - chr4.1:85445395-85445414 None:intergenic 50.0%
AGGAGTCATGAAGCATGCCA+AGG - chr4.1:85445155-85445174 None:intergenic 50.0%
AGGATATCGTTCTGGCACTC+AGG + chr4.1:85444666-85444685 MS.gene026763:CDS 50.0%
AGGGAATCGAGGAAGATCCT+CGG + chr4.1:85444693-85444712 MS.gene026763:CDS 50.0%
AGTGGCCAAAATATCCGCCA+TGG - chr4.1:85442410-85442429 None:intergenic 50.0%
ATATCCTCCCAACACCGATG+AGG - chr4.1:85443495-85443514 None:intergenic 50.0%
ATGATGCTACCGCCATCATC+AGG - chr4.1:85443810-85443829 None:intergenic 50.0%
ATGTCATGCCAAGGTTCCCT+TGG - chr4.1:85444071-85444090 None:intergenic 50.0%
CAATCACAAAAGGCGGTCCA+AGG + chr4.1:85444051-85444070 MS.gene026763:CDS 50.0%
CACTTGCTTCGCTATCCGAT+TGG + chr4.1:85445279-85445298 MS.gene026763:CDS 50.0%
CATGAAACGTCGGGACTGTT+GGG - chr4.1:85444819-85444838 None:intergenic 50.0%
CCGATCATTTGCAAACCCGT+TGG + chr4.1:85442318-85442337 MS.gene026763:intron 50.0%
CCGATTGGAGTTGCTAGTGA+AGG + chr4.1:85445294-85445313 MS.gene026763:CDS 50.0%
CGCTTCAGCACCTTACTCAT+TGG + chr4.1:85442722-85442741 MS.gene026763:intron 50.0%
CGGGAATGAATGTCATGCCA+AGG - chr4.1:85444080-85444099 None:intergenic 50.0%
CGTTCTTCTGCCTCGGTAAT+CGG + chr4.1:85444726-85444745 MS.gene026763:CDS 50.0%
CTGGCTGTCTTGCAGCTAAA+TGG - chr4.1:85445086-85445105 None:intergenic 50.0%
CTTATGAGCCTCATCGGTGT+TGG + chr4.1:85443484-85443503 MS.gene026763:CDS 50.0%
GACATTCATTCCCGCCTTGA+AGG + chr4.1:85444086-85444105 MS.gene026763:CDS 50.0%
GCAGCATCTTCAGGAGTTTC+TGG - chr4.1:85444305-85444324 None:intergenic 50.0%
GCTTGAACCGATGCACTTTC+TGG - chr4.1:85444605-85444624 None:intergenic 50.0%
GGATATCGTTCTGGCACTCA+GGG + chr4.1:85444667-85444686 MS.gene026763:CDS 50.0%
GTGGACAGTGAATTACCTGG+TGG + chr4.1:85443882-85443901 MS.gene026763:CDS 50.0%
GTTCTTCTGCCTCGGTAATC+GGG + chr4.1:85444727-85444746 MS.gene026763:CDS 50.0%
TACCGCCATCATCAGGATTG+CGG - chr4.1:85443803-85443822 None:intergenic 50.0%
TCATGAAACGTCGGGACTGT+TGG - chr4.1:85444820-85444839 None:intergenic 50.0%
TCCATCCCCGGTAACATTTC+CGG + chr4.1:85444214-85444233 MS.gene026763:CDS 50.0%
TCGCTCCGTCCATTGATCTT+TGG - chr4.1:85445026-85445045 None:intergenic 50.0%
TTCCGGATGATCACGAGACA+TGG + chr4.1:85444231-85444250 MS.gene026763:CDS 50.0%
! AAGAGCATATGTGCCTGTCG+AGG + chr4.1:85443191-85443210 MS.gene026763:CDS 50.0%
! ATTCTAGGAGGCCAAAGGCT+GGG + chr4.1:85443595-85443614 MS.gene026763:CDS 50.0%
! CCAGGTGCTGCAATCACAAA+AGG + chr4.1:85444041-85444060 MS.gene026763:CDS 50.0%
! CCTTTTGTGATTGCAGCACC+TGG - chr4.1:85444044-85444063 None:intergenic 50.0%
! CTCTTTTGCTTGGAGTGGTG+AGG + chr4.1:85444448-85444467 MS.gene026763:CDS 50.0%
! GGAAGCTCTTTTGCTTGGAG+TGG + chr4.1:85444443-85444462 MS.gene026763:CDS 50.0%
! GGTGCTGCAATCACAAAAGG+CGG + chr4.1:85444044-85444063 MS.gene026763:CDS 50.0%
!! AAGCTTAATGCTGGTGGTGG+TGG + chr4.1:85441923-85441942 MS.gene026763:CDS 50.0%
!! AGGGACTCTGAGATAGCGAT+GGG + chr4.1:85445045-85445064 MS.gene026763:CDS 50.0%
!! AGTGGACCCTGCTTGCTTTT+AGG + chr4.1:85442138-85442157 MS.gene026763:intron 50.0%
!! TGATGGCGGTAGCATCATTC+AGG + chr4.1:85443812-85443831 MS.gene026763:CDS 50.0%
!!! ATTGATGGTGGGGCTGCTTT+TGG + chr4.1:85444275-85444294 MS.gene026763:CDS 50.0%
!!! GGACTTTTGGCTTTCCACCA+TGG + chr4.1:85442490-85442509 MS.gene026763:intron 50.0%
!!! TTGATGGTGGGGCTGCTTTT+GGG + chr4.1:85444276-85444295 MS.gene026763:CDS 50.0%
AAGCGATCGGTCCTTCAAGG+CGG - chr4.1:85444100-85444119 None:intergenic 55.0%
ACCGCCATCATCAGGATTGC+GGG - chr4.1:85443802-85443821 None:intergenic 55.0%
ACTCAGGGCAAAGGGAATCG+AGG + chr4.1:85444682-85444701 MS.gene026763:CDS 55.0%
AGCATATGTGCCTGTCGAGG+AGG + chr4.1:85443194-85443213 MS.gene026763:CDS 55.0%
AGCGAAGCAAGTGTCCAGGA+AGG - chr4.1:85445272-85445291 None:intergenic 55.0%
ATGGAGGAAGCAAGGTGGGA+AGG + chr4.1:85444148-85444167 MS.gene026763:CDS 55.0%
ATGTCACGAAAGACCGCAGC+TGG + chr4.1:85443319-85443338 MS.gene026763:CDS 55.0%
CAACGATGGAGGAAGCAAGG+TGG + chr4.1:85444143-85444162 MS.gene026763:CDS 55.0%
CCATTCAAGACCTCCTCGAC+AGG - chr4.1:85443207-85443226 None:intergenic 55.0%
CCTCCTAGAATCCCTCACCA+AGG - chr4.1:85443586-85443605 None:intergenic 55.0%
CCTGTCGAGGAGGTCTTGAA+TGG + chr4.1:85443204-85443223 MS.gene026763:CDS 55.0%
CCTTGAAGGACCGATCGCTT+GGG + chr4.1:85444100-85444119 MS.gene026763:CDS 55.0%
CCTTGGTGAGGGATTCTAGG+AGG + chr4.1:85443583-85443602 MS.gene026763:CDS 55.0%
CGAGGAGGTCTTGAATGGTG+AGG + chr4.1:85443209-85443228 MS.gene026763:CDS 55.0%
CTGAAGATGCTGCGAGAGCT+GGG + chr4.1:85444312-85444331 MS.gene026763:CDS 55.0%
GACACCAAGGCTCGGATTCT+CGG + chr4.1:85445354-85445373 MS.gene026763:CDS 55.0%
GAGCAACGATGGAGGAAGCA+AGG + chr4.1:85444140-85444159 MS.gene026763:CDS 55.0%
GCGAGAGCTGGGCTTATTAG+TGG + chr4.1:85444323-85444342 MS.gene026763:CDS 55.0%
GCTGGGGGAGACACAACAAT+TGG + chr4.1:85443612-85443631 MS.gene026763:CDS 55.0%
GGAAATGTTACCGGGGATGG+AGG - chr4.1:85444215-85444234 None:intergenic 55.0%
GGATAGCGAAGCAAGTGTCC+AGG - chr4.1:85445276-85445295 None:intergenic 55.0%
GTTCTGGCACTCAGGGCAAA+GGG + chr4.1:85444674-85444693 MS.gene026763:CDS 55.0%
GTTGTCCCAATGTGGCCAGA+GGG + chr4.1:85444575-85444594 MS.gene026763:CDS 55.0%
TCACTTGAGCACGACCTTCC+TGG + chr4.1:85445255-85445274 MS.gene026763:CDS 55.0%
TCCGGAAATGTTACCGGGGA+TGG - chr4.1:85444218-85444237 None:intergenic 55.0%
TGGAGAAGGCAAGAGTGGGA+AGG + chr4.1:85443037-85443056 MS.gene026763:CDS 55.0%
TGTCACGAAAGACCGCAGCT+GGG + chr4.1:85443320-85443339 MS.gene026763:CDS 55.0%
TGTTGTCCCAATGTGGCCAG+AGG + chr4.1:85444574-85444593 MS.gene026763:CDS 55.0%
! GAGAATCCGAGCCTTGGTGT+CGG - chr4.1:85445355-85445374 None:intergenic 55.0%
! GAGGGATTCTAGGAGGCCAA+AGG + chr4.1:85443590-85443609 MS.gene026763:CDS 55.0%
! GATTCTAGGAGGCCAAAGGC+TGG + chr4.1:85443594-85443613 MS.gene026763:CDS 55.0%
! GGACTGGCAGAGGAGAACAA+TGG + chr4.1:85444631-85444650 MS.gene026763:CDS 55.0%
! GGGTGTCCCAGAAAGTGCAT+CGG + chr4.1:85444595-85444614 MS.gene026763:CDS 55.0%
! GGTGGGGCCATGGAGTTTTA+AGG + chr4.1:85442453-85442472 MS.gene026763:intron 55.0%
! TTCTAGGAGGCCAAAGGCTG+GGG + chr4.1:85443596-85443615 MS.gene026763:CDS 55.0%
! TTTTCCCCGACACCAAGGCT+CGG + chr4.1:85445346-85445365 MS.gene026763:CDS 55.0%
!! AGAATCCGAGCCTTGGTGTC+GGG - chr4.1:85445354-85445373 None:intergenic 55.0%
!! GAGGGACTCTGAGATAGCGA+TGG + chr4.1:85445044-85445063 MS.gene026763:CDS 55.0%
!! TGTAACAGATGGTGGGGCCA+TGG + chr4.1:85442443-85442462 MS.gene026763:intron 55.0%
!!! CAGCGCCATGGCGGATATTT+TGG + chr4.1:85442402-85442421 MS.gene026763:intron 55.0%
!!! GGGGCCATGGAGTTTTAAGG+TGG + chr4.1:85442456-85442475 MS.gene026763:intron 55.0%
AAGGCGGTCCAAGGGAACCT+TGG + chr4.1:85444060-85444079 MS.gene026763:CDS 60.0%
ACCAAGGCTCGGATTCTCGG+CGG + chr4.1:85445357-85445376 MS.gene026763:CDS 60.0%
AGCGATCGGTCCTTCAAGGC+GGG - chr4.1:85444099-85444118 None:intergenic 60.0%
CCAGCACGTGGTCAAGTCCA+TGG + chr4.1:85445102-85445121 MS.gene026763:CDS 60.0%
CCAGCTCTCGCAGCATCTTC+AGG - chr4.1:85444314-85444333 None:intergenic 60.0%
CCATGGACTTGACCACGTGC+TGG - chr4.1:85445105-85445124 None:intergenic 60.0%
CCCAAGCGATCGGTCCTTCA+AGG - chr4.1:85444103-85444122 None:intergenic 60.0%
CCGCCATCATCAGGATTGCG+GGG - chr4.1:85443801-85443820 None:intergenic 60.0%
CCTGAAGATGCTGCGAGAGC+TGG + chr4.1:85444311-85444330 MS.gene026763:CDS 60.0%
CGCCATCATCAGGATTGCGG+GGG - chr4.1:85443800-85443819 None:intergenic 60.0%
CGCTTATCCGACCTTCCACC+AGG - chr4.1:85443900-85443919 None:intergenic 60.0%
CGTTCTGGCACTCAGGGCAA+AGG + chr4.1:85444673-85444692 MS.gene026763:CDS 60.0%
GCCTTGAAGGACCGATCGCT+TGG + chr4.1:85444099-85444118 MS.gene026763:CDS 60.0%
GGACACCCTCTGGCCACATT+GGG - chr4.1:85444583-85444602 None:intergenic 60.0%
GGAGATGTCACACAGCTGCC+TGG + chr4.1:85445315-85445334 MS.gene026763:CDS 60.0%
GGGGGTCTCGACCTTTGTGA+TGG + chr4.1:85443939-85443958 MS.gene026763:CDS 60.0%
GTTGTGTCTCCCCCAGCCTT+TGG - chr4.1:85443609-85443628 None:intergenic 60.0%
TATCCGCCATGGCGCTGCTA+TGG - chr4.1:85442399-85442418 None:intergenic 60.0%
TCTAGGAGGCCAAAGGCTGG+GGG + chr4.1:85443597-85443616 MS.gene026763:CDS 60.0%
TGCCCCCGCAATCCTGATGA+TGG + chr4.1:85443795-85443814 MS.gene026763:CDS 60.0%
!! CCCCGCAATCCTGATGATGG+CGG + chr4.1:85443798-85443817 MS.gene026763:CDS 60.0%
!! CGATTGCAGATGGCGGACCA+TGG - chr4.1:85442510-85442529 None:intergenic 60.0%
!! GAATCCGAGCCTTGGTGTCG+GGG - chr4.1:85445353-85445372 None:intergenic 60.0%
!! GCACTTTCTGGGACACCCTC+TGG - chr4.1:85444593-85444612 None:intergenic 60.0%
!! TGAGCCTCATCGGTGTTGGG+AGG + chr4.1:85443488-85443507 MS.gene026763:CDS 60.0%
!! TTGCAGATGGCGGACCATGG+TGG - chr4.1:85442507-85442526 None:intergenic 60.0%
AAAGACCGCAGCTGGGCTCG+AGG + chr4.1:85443327-85443346 MS.gene026763:CDS 65.0%
GAATGCCTCGAGCCCAGCTG+CGG - chr4.1:85443335-85443354 None:intergenic 65.0%
GCTGCAAGACAGCCAGCACG+TGG + chr4.1:85445090-85445109 MS.gene026763:CDS 65.0%
GGGACACCCTCTGGCCACAT+TGG - chr4.1:85444584-85444603 None:intergenic 65.0%
TGTCGGCCATAGCAGCGCCA+TGG + chr4.1:85442390-85442409 MS.gene026763:intron 65.0%
CGGCCATAGCAGCGCCATGG+CGG + chr4.1:85442393-85442412 MS.gene026763:intron 70.0%
GCCGCCGAGAATCCGAGCCT+TGG - chr4.1:85445361-85445380 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 85441869 85445416 85441869 ID=MS.gene026763
chr4.1 mRNA 85441869 85445416 85441869 ID=MS.gene026763.t1;Parent=MS.gene026763
chr4.1 exon 85441869 85441961 85441869 ID=MS.gene026763.t1.exon1;Parent=MS.gene026763.t1
chr4.1 CDS 85441869 85441961 85441869 ID=cds.MS.gene026763.t1;Parent=MS.gene026763.t1
chr4.1 exon 85442967 85444866 85442967 ID=MS.gene026763.t1.exon2;Parent=MS.gene026763.t1
chr4.1 CDS 85442967 85444866 85442967 ID=cds.MS.gene026763.t1;Parent=MS.gene026763.t1
chr4.1 exon 85444983 85445416 85444983 ID=MS.gene026763.t1.exon3;Parent=MS.gene026763.t1
chr4.1 CDS 85444983 85445416 85444983 ID=cds.MS.gene026763.t1;Parent=MS.gene026763.t1
Gene Sequence

>MS.gene026763

ATGGCACAAATTCATCTTCATGGTACTCTTCATGCTACTATCTATGAGGTTGATAAGCTTAATGCTGGTGGTGGTGGAAATTTCCTCAGCATGGTACTGTTTTATTTAATTATTTTGGCCTATTTGGATCTAATGATTCAATTGATTTTTAGATTTCATGTTTTTGGATTTTGTAATTTTAAGTGCATGTGATTTCATTTGTTTTTGCAAATGATTGAATTAAAAAAAAAAAAAGAATATTTTGGTGGTGGGGATCACTGATGCATCAAAGTGGACCCTGCTTGCTTTTAGGATCTGTGATCTGTTTCATTATTTTATATTGTACTATATTAATTAATAAATAAAAAGTTCTATTGATTTTTTTTTTCTTCCAGCGAATCTGTGATGAGACTTACATTTCTAATCTGATCTTAAATTATGCAGCAACATGCATCATTTTTCTGATACTACCGATCATTTGCAAACCCGTTGGTTAATTGTCAATATTAATAACAATGTTAATCTATATCAGTTTTGTCAAATGTCGGCCATAGCAGCGCCATGGCGGATATTTTGGCCACTGCCATGCCTAATTTGTAACAGATGGTGGGGCCATGGAGTTTTAAGGTGGCTCAAAATGACGGACTTTTGGCTTTCCACCATGGTCCGCCATCTGCAATCGATAACACTGATCTATATTAGTGATTGTTGTCATGTTGTAATTTAATTGTTTGCTTGACATGATTCAAGATTGTCGCCTTCGATTGAAACTACTTTGTGTTCATTCAACTGATCTTTTACCTGAATAACCATTAACTTTATCTTATGCATCTTTTGTAACACATATGCAATGTTTTAGTAAAAAAATTGTGTGCGCTTCAGCACCTTACTCATTGGATTTTGCTTTCGTTATTGGATTTTATACATTGCACATACATACATAGGAGACTGATCTTTTACCTGAATAACCAAAGCTAAATCAAGCAAATTAATGTCGATTGTTTATGTTTATACATACATTGACATGGTGAAAAGAGAATATCCAATTTCTTTAGTTTTGCGTTTTTATTTTCATCCTTCATTATTAATGACCCTATTTATTTGCTTATACTTATACAGATCAGGCAAAACATTGAGGAAACTGTTGGTCTTGGAAAGGGAGTTACTAAACTCTATGCTACCATTGATTTGGAGAAGGCAAGAGTGGGAAGGACAAGAATTATTGAAAATGAGCATACTAATCCCAAATGGTACGAGTCTTTTCACATTTACTGTGCTCATATGGCTTCAGATATCATATTCACTGTGAAAGATGATAATCCTGTTGGAGCAACTTTAATCGGAAGAGCATATGTGCCTGTCGAGGAGGTCTTGAATGGTGAGGAAATTGATAGGTGGGTGGAAATTTTGGACACTGAAAAAAACCCGATACAAGAGGGTTCGAAGATCCATGTGAAGCTGCAATATTTTGATGTCACGAAAGACCGCAGCTGGGCTCGAGGCATTCAAAGCGCTAAATTTCCTGGAGTTCCGTATACTTTCTTCTCACAGAGGAAAGGATGTAAGGTATCTCTTTACCAAGATTCTCATGTGCCGGATAATTTCATCCCTAAAATACCACTTTCTGGTGGCAAGACTTATGAGCCTCATCGGTGTTGGGAGGATATTTATGATGCCATCACCAATGCAAAACACATGATATACATTACCGGTTGGTCTGTTTATACCGAAATTTCCTTGGTGAGGGATTCTAGGAGGCCAAAGGCTGGGGGAGACACAACAATTGGTGAGCTTCTAAAGAAAAAGTCTAGTGAAGGTGTTAGGGTTTTGATGCTTGTTTGGGATGATAGAACATCGGTTGGTTTGTTGAAAAAGGATGGATTGATGGCTACTCATGACGAAGAAACCGCACAGTTCTTTGAAGGTACTGATGTGCACTGTGTTTTATGCCCCCGCAATCCTGATGATGGCGGTAGCATCATTCAGGATTTACAAGTTTCCACCATGTTTACTCATCACCAGAAGATTGTGGTTGTGGACAGTGAATTACCTGGTGGAAGGTCGGATAAGCGAAGAATTGTGAGTTTTGTTGGGGGTCTCGACCTTTGTGATGGAAGATATGATACTCCATTCCACTCACTTTTTAGAACTCTTGACACAGCACACCATGATGATTTTCATCAACCTAACTTTCCAGGTGCTGCAATCACAAAAGGCGGTCCAAGGGAACCTTGGCATGACATTCATTCCCGCCTTGAAGGACCGATCGCTTGGGATGTGTTGTTTAACTTTGAGCAACGATGGAGGAAGCAAGGTGGGAAGGATTTACTTGTCTCTCTAAGGGAGCTTGAAGATTCTATTATTCCTCCATCCCCGGTAACATTTCCGGATGATCACGAGACATGGAATGTTCAGCTGTTTAGATCTATTGATGGTGGGGCTGCTTTTGGGTTCCCAGAAACTCCTGAAGATGCTGCGAGAGCTGGGCTTATTAGTGGAAAGGATAATATCATCGATCGTAGCATTCAAGATGCTTATATTAATGCTATTCGGCGTGCAAAGAACTTCATCTATATTGAAAATCAGTATTTCCTTGGAAGCTCTTTTGCTTGGAGTGGTGAGGATATTAAGCCTGAAGACATTGGTGCTTTGCATCTCATCCCAAAGGAACTTTCACTTAAGATTATGAGTAAGATTGAAGCCGGGGAAAAGTTCACTGTATACGTTGTTGTCCCAATGTGGCCAGAGGGTGTCCCAGAAAGTGCATCGGTTCAAGCAATATTGGACTGGCAGAGGAGAACAATGGAGATGATGTACAAGGATATCGTTCTGGCACTCAGGGCAAAGGGAATCGAGGAAGATCCTCGGAATTATTTGACGTTCTTCTGCCTCGGTAATCGGGAAGTAAAGAAACAAGGAGAGTACGAGCCTTCTGAACAACCAGAACCTGATTCAGATTACGAGAGAGCCCAACAGTCCCGACGTTTCATGATCTATGTTCATACCAAGATGATGATAGGTAAGTTTGAAAATTACTGTCATAAATTACAGGCTGCAGCAATCTCACAAATTTTGAAGCATTATTATTTAATCATTACTTTCATGATTATGCATACTTTCTTTCTTTCTTTGTAGTTGATGACGAATACATAATCGTTGGATCTGCCAACATCAACCAAAGATCAATGGACGGAGCGAGGGACTCTGAGATAGCGATGGGAGCCTATCAGCCCTACCATTTAGCTGCAAGACAGCCAGCACGTGGTCAAGTCCATGGTTTTCGCATGGCATTATGGTATGAGCACCTTGGCATGCTTCATGACTCCTTCCTTCATCCAGAAAATCAAGAATGTATCCGTAAGGTGAACCAGATTGCTGACAAATATTGGGATCTCTATTCAAATGATTCACTTGAGCACGACCTTCCTGGACACTTGCTTCGCTATCCGATTGGAGTTGCTAGTGAAGGAGATGTCACACAGCTGCCTGGATTTGAATTTTTCCCCGACACCAAGGCTCGGATTCTCGGCGGCAAAGCTGATTACCTCCCTCCTATCCTCACTACTTAG
Protein sequence

>MS.gene026763.t1

MAQIHLHGTLHATIYEVDKLNAGGGGNFLSMIRQNIEETVGLGKGVTKLYATIDLEKARVGRTRIIENEHTNPKWYESFHIYCAHMASDIIFTVKDDNPVGATLIGRAYVPVEEVLNGEEIDRWVEILDTEKNPIQEGSKIHVKLQYFDVTKDRSWARGIQSAKFPGVPYTFFSQRKGCKVSLYQDSHVPDNFIPKIPLSGGKTYEPHRCWEDIYDAITNAKHMIYITGWSVYTEISLVRDSRRPKAGGDTTIGELLKKKSSEGVRVLMLVWDDRTSVGLLKKDGLMATHDEETAQFFEGTDVHCVLCPRNPDDGGSIIQDLQVSTMFTHHQKIVVVDSELPGGRSDKRRIVSFVGGLDLCDGRYDTPFHSLFRTLDTAHHDDFHQPNFPGAAITKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWRKQGGKDLLVSLRELEDSIIPPSPVTFPDDHETWNVQLFRSIDGGAAFGFPETPEDAARAGLISGKDNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSSFAWSGEDIKPEDIGALHLIPKELSLKIMSKIEAGEKFTVYVVVPMWPEGVPESASVQAILDWQRRTMEMMYKDIVLALRAKGIEEDPRNYLTFFCLGNREVKKQGEYEPSEQPEPDSDYERAQQSRRFMIYVHTKMMIVDDEYIIVGSANINQRSMDGARDSEIAMGAYQPYHLAARQPARGQVHGFRMALWYEHLGMLHDSFLHPENQECIRKVNQIADKYWDLYSNDSLEHDLPGHLLRYPIGVASEGDVTQLPGFEFFPDTKARILGGKADYLPPILTT