AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene057038

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene057038.t1 MTR_2g100250 98.677 756 10 0 1 756 1 756 0.0 1575
MS.gene057038.t1 MTR_8g016160 74.005 754 180 5 4 756 7 745 0.0 1171
MS.gene057038.t1 MTR_2g103730 44.636 811 385 19 4 756 5 809 0.0 634
MS.gene057038.t1 MTR_3g107360 43.445 778 381 17 30 756 53 822 0.0 624
MS.gene057038.t1 MTR_4g010650 42.222 810 403 19 5 756 6 808 0.0 612
MS.gene057038.t1 MTR_3g107320 43.117 770 388 17 32 756 62 826 0.0 604
MS.gene057038.t1 MTR_5g011050 41.321 772 382 20 36 749 90 848 0.0 543
MS.gene057038.t1 MTR_5g011060 40.674 772 387 20 36 749 84 842 4.64e-178 531
MS.gene057038.t1 MTR_8g033080 41.276 768 384 21 36 745 281 1039 5.98e-178 538
MS.gene057038.t1 MTR_7g075910 40.933 772 376 25 36 745 351 1104 8.25e-177 536
MS.gene057038.t1 MTR_5g023050 39.152 802 392 24 36 756 86 872 1.26e-176 529
MS.gene057038.t1 MTR_8g088690 40.076 786 391 21 36 756 72 842 2.03e-174 522
MS.gene057038.t1 MTR_3g114840 39.547 794 392 23 36 756 73 851 3.08e-171 514
MS.gene057038.t1 MTR_3g114840 39.853 680 329 18 36 645 73 742 2.72e-144 442
MS.gene057038.t1 MTR_8g033080 39.312 552 275 16 36 534 281 825 9.49e-108 348
MS.gene057038.t1 MTR_1g083620 33.462 260 123 14 427 670 461 686 2.27e-22 103
MS.gene057038.t1 MTR_1g083620 28.440 218 126 5 185 392 127 324 5.01e-16 82.8
MS.gene057038.t1 MTR_1g083620 33.462 260 123 14 427 670 721 946 2.37e-22 103
MS.gene057038.t1 MTR_1g083620 28.440 218 126 5 185 392 387 584 4.50e-16 83.2
MS.gene057038.t1 MTR_2g435560 30.837 227 109 8 425 638 764 955 1.28e-19 94.7
MS.gene057038.t1 MTR_2g435560 25.740 338 166 12 145 425 324 633 9.74e-16 82.4
MS.gene057038.t1 MTR_2g435560 30.837 227 109 8 425 638 629 820 1.37e-19 94.7
MS.gene057038.t1 MTR_2g435560 26.804 291 143 10 145 393 189 451 1.16e-15 82.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene057038.t1 AT1G55180 62.240 768 263 11 3 756 8 762 0.0 1001
MS.gene057038.t1 AT1G55180 62.097 744 255 11 27 756 10 740 0.0 965
MS.gene057038.t1 AT3G15730 43.473 766 382 16 36 756 51 810 0.0 615
MS.gene057038.t1 AT1G52570 43.342 766 383 19 36 756 51 810 0.0 611
MS.gene057038.t1 AT1G52570 43.342 766 383 19 36 756 51 810 0.0 611
MS.gene057038.t1 AT1G52570 43.342 766 383 19 36 756 51 810 0.0 611
MS.gene057038.t1 AT5G25370 42.753 821 396 18 4 756 6 820 0.0 584
MS.gene057038.t1 AT5G25370 42.753 821 396 18 4 756 6 820 0.0 584
MS.gene057038.t1 AT5G25370 42.753 821 396 18 4 756 6 820 0.0 584
MS.gene057038.t1 AT5G25370 45.027 744 359 17 57 756 8 745 0.0 569
MS.gene057038.t1 AT4G11830 41.753 776 370 23 36 745 55 814 1.04e-180 538
MS.gene057038.t1 AT4G11830 41.753 776 370 23 36 745 87 846 1.94e-180 538
MS.gene057038.t1 AT4G11840 41.335 779 370 25 36 745 96 856 4.60e-177 530
MS.gene057038.t1 AT2G42010 40.808 767 385 22 36 745 319 1073 6.95e-177 536
MS.gene057038.t1 AT4G11840 40.927 777 346 24 36 745 96 826 2.36e-175 524
MS.gene057038.t1 AT4G11850 41.268 773 378 23 36 745 89 848 1.65e-174 523
MS.gene057038.t1 AT2G42010 39.520 792 385 22 36 745 319 1098 2.16e-173 528
MS.gene057038.t1 AT4G35790 38.269 797 397 23 36 756 80 857 2.36e-168 507
MS.gene057038.t1 AT4G00240 39.323 768 395 21 36 745 11 765 4.25e-168 503
MS.gene057038.t1 AT4G00240 38.605 803 407 24 16 745 93 882 1.86e-167 506
MS.gene057038.t1 AT4G35790 37.748 808 397 23 36 756 80 868 1.31e-166 503
MS.gene057038.t1 AT4G00240 39.323 768 395 21 36 745 163 917 1.97e-166 504
MS.gene057038.t1 AT4G35790 37.705 610 299 17 36 573 80 680 1.34e-121 380
MS.gene057038.t1 AT4G11830 40.036 562 268 18 36 542 87 634 1.51e-114 360
MS.gene057038.t1 AT4G11830 40.110 546 258 18 36 526 87 618 5.24e-109 346
MS.gene057038.t1 AT3G16785 32.727 220 114 8 425 638 739 930 5.72e-20 95.9
MS.gene057038.t1 AT3G16785 29.577 213 116 7 193 393 388 578 4.28e-15 80.1
MS.gene057038.t1 AT3G16785 32.727 220 114 8 425 638 739 930 5.72e-20 95.9
MS.gene057038.t1 AT3G16785 29.577 213 116 7 193 393 388 578 4.28e-15 80.1
MS.gene057038.t1 AT3G16785 32.727 220 114 8 425 638 739 930 5.88e-20 95.9
MS.gene057038.t1 AT3G16785 29.577 213 116 7 193 393 388 578 4.76e-15 80.1
MS.gene057038.t1 AT3G16785 32.727 220 114 8 425 638 739 930 6.05e-20 95.9
MS.gene057038.t1 AT3G16785 29.577 213 116 7 193 393 388 578 3.68e-15 80.5
MS.gene057038.t1 AT3G16785 32.727 220 114 8 425 638 739 930 7.54e-20 95.5
MS.gene057038.t1 AT3G16785 29.577 213 116 7 193 393 388 578 4.37e-15 80.1
MS.gene057038.t1 AT3G16785 32.727 220 114 8 425 638 739 930 7.54e-20 95.5
MS.gene057038.t1 AT3G16785 29.577 213 116 7 193 393 388 578 4.37e-15 80.1
MS.gene057038.t1 AT3G05630 29.804 255 143 9 425 670 694 921 3.63e-19 93.2
MS.gene057038.t1 AT3G05630 27.477 222 123 7 185 392 375 572 6.18e-14 76.3

Find 163 sgRNAs with CRISPR-Local

Find 245 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACACCTTTGTTCTTGATAAA+TGG 0.146812 2.3:-3390189 None:intergenic
TCTTGAACTGGTTCACTTTC+AGG 0.161180 2.3:-3390996 None:intergenic
TAAAATTAAGGTTTATATTA+TGG 0.167823 2.3:+3389579 MS.gene057038:CDS
TGCACACATTCTAAACTTTC+TGG 0.177165 2.3:-3391981 None:intergenic
GTGAATGTCACCTTTGCTTA+TGG 0.212678 2.3:-3391898 None:intergenic
TTTCAGTGTTTATTTGTAAA+TGG 0.237490 2.3:+3389302 MS.gene057038:intron
ATGGTTCAAGCCAGCAAATT+TGG 0.246559 2.3:+3389598 MS.gene057038:CDS
TTCCTCAACAAGCACTTCTA+TGG 0.258809 2.3:+3390668 MS.gene057038:CDS
TCACTTTCAGGCACTCCTTC+TGG 0.260249 2.3:-3390984 None:intergenic
AAAACAACATGTACCATATT+AGG 0.268038 2.3:+3389461 MS.gene057038:CDS
GATGCTCATGCTTGTGTTAC+TGG 0.268529 2.3:+3390540 MS.gene057038:CDS
ACATCCTCCCATAACTTTCT+AGG 0.271863 2.3:-3389770 None:intergenic
GGCACCCTCCAATGAAATAT+TGG 0.278690 2.3:-3390836 None:intergenic
CAAATCAAGAACTAAAATTA+AGG 0.279298 2.3:+3389567 MS.gene057038:CDS
CTACAGCAGTGAAGAAATTA+TGG 0.290427 2.3:+3392040 MS.gene057038:CDS
CAACTTGGTTCCAAATTTGC+TGG 0.292857 2.3:-3389608 None:intergenic
TTTGCCCGTCCATCGATCTT+TGG 0.295154 2.3:-3391818 None:intergenic
TCAACTGTTGTGCCTTGATT+TGG 0.299930 2.3:-3389490 None:intergenic
TTGCTTCGACGTAAGCTTCA+TGG 0.302186 2.3:-3390779 None:intergenic
CCCATGATAGTAACACAAAA+TGG 0.306781 2.3:+3392092 MS.gene057038:CDS
TTCCCTCTACTAATGGAAAA+TGG 0.318183 2.3:+3389539 MS.gene057038:CDS
TGGCTGTAAGGGTTATGATT+TGG 0.320459 2.3:+3390148 MS.gene057038:CDS
ATATGTACCAGAACCATCTT+AGG 0.324723 2.3:-3389851 None:intergenic
GGCTGTAAGGGTTATGATTT+GGG 0.332421 2.3:+3390149 MS.gene057038:CDS
GTGTTACTGGCGAGGCGGCT+TGG 0.335844 2.3:+3390553 MS.gene057038:CDS
TGGATCCTTCCCTCTACTAA+TGG 0.347290 2.3:+3389532 MS.gene057038:CDS
GCACTCCAGTATTGAGTATC+AGG 0.351096 2.3:-3391188 None:intergenic
TGTTACTGGCGAGGCGGCTT+GGG 0.360313 2.3:+3390554 MS.gene057038:CDS
TCTCTGTCATTGACAGAGTT+AGG 0.362506 2.3:-3390351 None:intergenic
TTTCAATCCTAAGATGGTTC+TGG 0.364284 2.3:+3389844 MS.gene057038:CDS
ACATGACAATTAGACCTTTG+TGG 0.370512 2.3:-3389683 None:intergenic
AGCTTTGGTATCCACGGTTA+TGG 0.372953 2.3:-3390328 None:intergenic
ATTGACAGAGTTAGGAGCTT+TGG 0.373133 2.3:-3390343 None:intergenic
ATTGAAAACCAATATTTCAT+TGG 0.373278 2.3:+3390828 MS.gene057038:CDS
TTCAAACAATGAATGTTTCT+CGG 0.374381 2.3:-3390424 None:intergenic
GCACTTCTATGGAAAGGAAT+TGG 0.375461 2.3:+3390679 MS.gene057038:CDS
AAGCTTACGTCGAAGCAATA+AGG 0.376408 2.3:+3390784 MS.gene057038:CDS
GAAGTGCTTGTTGAGGAAAT+AGG 0.378292 2.3:-3390663 None:intergenic
GATGACCTATATATACTAAT+AGG 0.379557 2.3:+3391780 MS.gene057038:CDS
CACAAGAAAGTGAACGTGTT+TGG 0.380930 2.3:+3389378 MS.gene057038:CDS
GCATCATGCCATGGCTCTCT+TGG 0.387236 2.3:-3390522 None:intergenic
TGGAGTTCCTAGAAAGTTAT+GGG 0.388103 2.3:+3389763 MS.gene057038:CDS
CTCTTCCTGATACTCAATAC+TGG 0.390043 2.3:+3391183 MS.gene057038:CDS
TGAATGTCACCTTTGCTTAT+GGG 0.394279 2.3:-3391897 None:intergenic
CAACTCCATCTTGATGAAAC+TGG 0.398815 2.3:-3391869 None:intergenic
TGATGATGAGCAAAGATTGT+AGG 0.400183 2.3:-3390300 None:intergenic
GGGAATTTGTCATGTAATCT+AGG 0.401511 2.3:-3390279 None:intergenic
GTGGAGTTCCTAGAAAGTTA+TGG 0.405314 2.3:+3389762 MS.gene057038:CDS
GGATGTTTATAAAGCTATTG+AGG 0.411752 2.3:+3389787 MS.gene057038:CDS
CAGAAGAAGGAGTGGCTGTA+AGG 0.414409 2.3:+3390136 MS.gene057038:CDS
TTCTACCAGACAAATATTGC+AGG 0.419367 2.3:+3390477 MS.gene057038:CDS
AAGGGAAATGAAGGAGAGTA+GGG 0.420361 2.3:-3388853 None:intergenic
CTTAGTAGCTTTGTCCAACT+TGG 0.425327 2.3:-3389623 None:intergenic
GAAGGGAAATGAAGGAGAGT+AGG 0.425566 2.3:-3388854 None:intergenic
GCATGTGGGATTTCTGTTTG+AGG 0.436003 2.3:-3390075 None:intergenic
GTTCACTCCAAGCTCGTGAT+AGG 0.437935 2.3:+3391239 MS.gene057038:CDS
TCATTGGAGGGTGCCATTTG+TGG 0.442041 2.3:+3390844 MS.gene057038:CDS
GCAATGGATAAGCTCATTCA+TGG 0.442063 2.3:+3388799 None:intergenic
GATGATGAGCAAAGATTGTA+GGG 0.448753 2.3:-3390299 None:intergenic
ATCATAGAAAGTGGTGAGCC+AGG 0.450323 2.3:+3391077 MS.gene057038:CDS
CACACTGAATCTGAAATGTT+TGG 0.451106 2.3:-3389403 None:intergenic
CCTTGCAAATAGGGAAAAGA+AGG 0.453199 2.3:+3391130 MS.gene057038:CDS
ATCTTGATTGTCACATAAGC+AGG 0.455101 2.3:-3389329 None:intergenic
CTGATCCTATTAGTATATAT+AGG 0.457591 2.3:-3391785 None:intergenic
TCTTATCTTTCTGCCACAAA+TGG 0.460881 2.3:-3390857 None:intergenic
TTCATTAGAGCTCACATTGA+AGG 0.462875 2.3:-3388872 None:intergenic
AAATATTTAGTATATATTGC+AGG 0.463860 2.3:+3389815 MS.gene057038:CDS
CTGGTCTTTCAATCCTAAGA+TGG 0.467682 2.3:+3389838 MS.gene057038:CDS
TCAAAAGGAGGTTGGAAAGT+AGG 0.467738 2.3:-3389734 None:intergenic
CAATGCAGTATATCTTGAAC+TGG 0.467818 2.3:-3391008 None:intergenic
CTATCATGGGGTAAGTTACT+AGG 0.473210 2.3:-3392079 None:intergenic
GTGCAGAGAATGTGCTCAAT+AGG 0.473934 2.3:+3391999 MS.gene057038:CDS
CACAATTATCAAAAGGAGGT+TGG 0.476823 2.3:-3389742 None:intergenic
CTAAGTAGTGAAGAGTTTCA+AGG 0.476881 2.3:+3389641 MS.gene057038:CDS
ACAAGATTAAAGCAAGAGAA+AGG 0.477212 2.3:+3390931 MS.gene057038:CDS
CTGTTAGCTTTCTAAACAGT+TGG 0.477520 2.3:-3390743 None:intergenic
TATTTGTCTGGTAGAAATCA+TGG 0.479616 2.3:-3390470 None:intergenic
AAGGAAGACAGTTTGATCAA+TGG 0.480801 2.3:+3389512 MS.gene057038:CDS
TCCTATTGAGATTGCACTCA+AGG 0.481371 2.3:+3390902 MS.gene057038:CDS
AACTTTATTTCTCTAGCATG+TGG 0.485581 2.3:-3390090 None:intergenic
TAGCCCCTGCAATATTTGTC+TGG 0.486823 2.3:-3390482 None:intergenic
ATTAGGAAAATTCCAAATCA+AGG 0.487446 2.3:+3389478 MS.gene057038:CDS
ACAATGATGTATAAGTTGAT+TGG 0.489344 2.3:+3391047 MS.gene057038:CDS
GAAAACCAATATTTCATTGG+AGG 0.491937 2.3:+3390831 MS.gene057038:CDS
ACCTTGAGTGCAATCTCAAT+AGG 0.493010 2.3:-3390903 None:intergenic
GTGAAGAGTTTCAAGGGCTG+AGG 0.494050 2.3:+3389648 MS.gene057038:CDS
AATCAAGGCACAACAGTTGA+AGG 0.494105 2.3:+3389493 MS.gene057038:CDS
AAGTAATCTCTCGGATGTCC+TGG 0.496223 2.3:-3391095 None:intergenic
AAAACCAATATTTCATTGGA+GGG 0.496243 2.3:+3390832 MS.gene057038:CDS
CTCTTGGACCTCCTTTGTTG+AGG 0.496416 2.3:-3390506 None:intergenic
GGAACTCCACAATTATCAAA+AGG 0.498863 2.3:-3389749 None:intergenic
GGCACTCCTTCTGGCCACAT+TGG 0.503394 2.3:-3390975 None:intergenic
AATCATACCTATCACGAGCT+TGG 0.505438 2.3:-3391246 None:intergenic
CTCACATTGAAGGGAAATGA+AGG 0.505783 2.3:-3388862 None:intergenic
AAGCAATAAGGCGTGCCGAT+AGG 0.510171 2.3:+3390796 MS.gene057038:CDS
AAGATCGATGGACGGGCAAA+GGG 0.511045 2.3:+3391821 MS.gene057038:CDS
GGCTACCAGTTTCATCAAGA+TGG 0.515157 2.3:+3391864 MS.gene057038:CDS
CAAGATAGACAATAAGAAAG+TGG 0.515400 2.3:+3389346 MS.gene057038:CDS
AAGAAATTCAAGTAATCTCT+CGG 0.518087 2.3:-3391104 None:intergenic
CAGTATTGAGTATCAGGAAG+AGG 0.519004 2.3:-3391182 None:intergenic
AAAGATCGATGGACGGGCAA+AGG 0.521722 2.3:+3391820 MS.gene057038:CDS
CATGCTAGAGAAATAAAGTT+GGG 0.529280 2.3:+3390093 MS.gene057038:CDS
GATGTTTATAAAGCTATTGA+GGG 0.530650 2.3:+3389788 MS.gene057038:CDS
AGAAGAAGGAGTGGCTGTAA+GGG 0.531289 2.3:+3390137 MS.gene057038:CDS
ACTTTATTTCTCTAGCATGT+GGG 0.537734 2.3:-3390089 None:intergenic
ATTGGAAAGTGCAAGTATAC+CGG 0.542544 2.3:+3390697 MS.gene057038:CDS
TCATTAGAGCTCACATTGAA+GGG 0.542682 2.3:-3388871 None:intergenic
TAGGGAAAAGAAGGAAAATG+AGG 0.551505 2.3:+3391139 MS.gene057038:CDS
CAGCAAATTTGGAACCAAGT+TGG 0.555393 2.3:+3389609 MS.gene057038:CDS
ATTGTTTGAAACACTTGCTG+AGG 0.558143 2.3:+3390437 MS.gene057038:CDS
TGAACCAAAGATCGATGGAC+GGG 0.560632 2.3:+3391814 MS.gene057038:CDS
GAGGTTGGAAAGTAGGTGAA+TGG 0.561082 2.3:-3389727 None:intergenic
CAGTGAAGAAATTATGGACA+TGG 0.568985 2.3:+3392046 MS.gene057038:CDS
TCTGTGGAAGATCTAACTAA+TGG 0.569159 2.3:+3392116 MS.gene057038:CDS
TCAGGAAGAGGAGAATGTGG+TGG 0.569774 2.3:-3391170 None:intergenic
TTTCCATTTATCAAGAACAA+AGG 0.570612 2.3:+3390186 MS.gene057038:CDS
ATTTAGTATATATTGCAGGC+TGG 0.570668 2.3:+3389819 MS.gene057038:CDS
GATACAAAAGCTCTAGTGAA+AGG 0.570925 2.3:+3392155 MS.gene057038:CDS
TTCAATGTACACAAACCTAT+CGG 0.572544 2.3:-3390811 None:intergenic
GCTCATTCATGGAACAATTG+AGG 0.574540 2.3:+3388810 MS.gene057038:CDS
ACATGCTAGAGAAATAAAGT+TGG 0.574919 2.3:+3390092 MS.gene057038:CDS
CAACAAGCACTTCTATGGAA+AGG 0.578353 2.3:+3390673 MS.gene057038:CDS
GTCATACCAATGTGGCCAGA+AGG 0.580529 2.3:+3390969 MS.gene057038:CDS
TAAGTAGTGAAGAGTTTCAA+GGG 0.580907 2.3:+3389642 MS.gene057038:CDS
GGAGAAGCAATCATAGAAAG+TGG 0.580963 2.3:+3391068 MS.gene057038:CDS
GTTAGGAGCTTTGGTATCCA+CGG 0.582477 2.3:-3390334 None:intergenic
TTCCATAGAAGTGCTTGTTG+AGG 0.590769 2.3:-3390670 None:intergenic
GCTCAATAGGAGATAAAATG+TGG 0.592126 2.3:+3392012 MS.gene057038:CDS
GGTGGTTTAGATTTGTGCGA+CGG 0.597565 2.3:+3390390 MS.gene057038:CDS
TCTACCAGACAAATATTGCA+GGG 0.601616 2.3:+3390478 MS.gene057038:CDS
GTATCAGGAAGAGGAGAATG+TGG 0.604673 2.3:-3391173 None:intergenic
TGAAGAGTTTCAAGGGCTGA+GGG 0.609783 2.3:+3389649 MS.gene057038:CDS
CTGAGACATGATCAATCGAC+CGG 0.610594 2.3:-3390716 None:intergenic
AAAGAAAGCAGAAGAAGGAG+TGG 0.610818 2.3:+3390128 MS.gene057038:CDS
GGCTAAGTGGTAATGACAGA+GGG 0.611158 2.3:-3392197 None:intergenic
AGTAACACAAAATGGATCTG+TGG 0.620720 2.3:+3392100 MS.gene057038:CDS
ACACAAAAGTAGTATGCAGA+AGG 0.623210 2.3:+3390253 MS.gene057038:CDS
GTGAACCAAAGATCGATGGA+CGG 0.630105 2.3:+3391813 MS.gene057038:CDS
CAAGCATGAGCATCATGCCA+TGG 0.632322 2.3:-3390531 None:intergenic
CAGTTCAAGATATACTGCAT+TGG 0.636717 2.3:+3391009 MS.gene057038:CDS
GTTGATCATCCCATAAGCAA+AGG 0.638827 2.3:+3391888 MS.gene057038:CDS
TGAAGAAATTATGGACATGG+AGG 0.639170 2.3:+3392049 MS.gene057038:CDS
CTACCAGACAAATATTGCAG+GGG 0.640062 2.3:+3390479 MS.gene057038:CDS
AGGGACACAGAAATTGCGAT+CGG 0.641781 2.3:+3391840 MS.gene057038:CDS
AAATGTGAACCAAAGATCGA+TGG 0.642298 2.3:+3391809 MS.gene057038:CDS
ACTCCACAATTATCAAAAGG+AGG 0.646785 2.3:-3389746 None:intergenic
AAGGAGGTCCAAGAGAGCCA+TGG 0.649131 2.3:+3390514 MS.gene057038:CDS
GAAGAAATTATGGACATGGA+GGG 0.652171 2.3:+3392050 MS.gene057038:CDS
TCATGCTTGTGTTACTGGCG+AGG 0.655164 2.3:+3390545 MS.gene057038:CDS
GACACAGAAATTGCGATCGG+AGG 0.656668 2.3:+3391843 MS.gene057038:CDS
GGGGCTAGCCTCAACAAAGG+AGG 0.660504 2.3:+3390498 MS.gene057038:CDS
TGCTTGTGTTACTGGCGAGG+CGG 0.660654 2.3:+3390548 MS.gene057038:CDS
GCAGGGGCTAGCCTCAACAA+AGG 0.667195 2.3:+3390495 MS.gene057038:CDS
TGGCTAAGTGGTAATGACAG+AGG 0.667320 2.3:-3392198 None:intergenic
TGGCAGAAAGATAAGAACAG+TGG 0.670376 2.3:+3390864 MS.gene057038:CDS
TGTGATGAACACACATGACG+AGG 0.674406 2.3:+3390209 MS.gene057038:CDS
TATTGAGATTGCACTCAAGG+TGG 0.678261 2.3:+3390905 MS.gene057038:CDS
AGTTCCTAGAAAGTTATGGG+AGG 0.683421 2.3:+3389766 MS.gene057038:CDS
GGAAGATCTAACTAATGGTG+AGG 0.696498 2.3:+3392121 MS.gene057038:CDS
TGTATATAGTCATACCAATG+TGG 0.699010 2.3:+3390961 MS.gene057038:CDS
GGGATGCTACATTTCCACAA+AGG 0.704533 2.3:+3389669 MS.gene057038:CDS
ACGAATACAGAATGTCAATG+TGG 0.720257 2.3:+3391919 MS.gene057038:CDS
TCAATGTGGTATGAACACAC+TGG 0.796931 2.3:+3391933 MS.gene057038:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAAAAAAATAAAGAGA+AGG - chr2.3:3388948-3388967 None:intergenic 10.0%
!! TAAAATTAAGGTTTATATTA+TGG + chr2.3:3389579-3389598 MS.gene057038:CDS 10.0%
!!! TATATTGATATACATTTTTT+TGG + chr2.3:3389900-3389919 MS.gene057038:intron 10.0%
!! AAATATTTAGTATATATTGC+AGG + chr2.3:3389815-3389834 MS.gene057038:CDS 15.0%
!! ATTAAACCAACATATATTTA+TGG - chr2.3:3391275-3391294 None:intergenic 15.0%
!! ATTAAACCATAAATATATGT+TGG + chr2.3:3391266-3391285 MS.gene057038:intron 15.0%
!!! CAAATTTTGTCAATATTATA+GGG - chr2.3:3388923-3388942 None:intergenic 15.0%
!!! TCAAATTTTGTCAATATTAT+AGG - chr2.3:3388924-3388943 None:intergenic 15.0%
!! AGTTGTTGAACATATATATA+TGG - chr2.3:3391584-3391603 None:intergenic 20.0%
!! ATTGAAAACCAATATTTCAT+TGG + chr2.3:3390828-3390847 MS.gene057038:CDS 20.0%
!! CAAATCAAGAACTAAAATTA+AGG + chr2.3:3389567-3389586 MS.gene057038:CDS 20.0%
!! CAAGTGAATTTATAATACAT+AGG + chr2.3:3391414-3391433 MS.gene057038:intron 20.0%
!! CTATGTATTATAAATTCACT+TGG - chr2.3:3391416-3391435 None:intergenic 20.0%
!! TTCCAATACAAAAACTTAAT+AGG + chr2.3:3391645-3391664 MS.gene057038:intron 20.0%
!! TTTCAGTGTTTATTTGTAAA+TGG + chr2.3:3389302-3389321 MS.gene057038:intron 20.0%
!!! AATAATTGGATTTTAAAAGG+AGG + chr2.3:3391508-3391527 MS.gene057038:intron 20.0%
!!! ACAATTTTTTTTTATTGACG+TGG - chr2.3:3391448-3391467 None:intergenic 20.0%
!!! ATAATTGGATTTTAAAAGGA+GGG + chr2.3:3391509-3391528 MS.gene057038:intron 20.0%
!!! ATTAAGTTTTTGTATTGGAA+AGG - chr2.3:3391645-3391664 None:intergenic 20.0%
!!! CCAAATAATTGGATTTTAAA+AGG + chr2.3:3391505-3391524 MS.gene057038:intron 20.0%
!!! CCTTTTAAAATCCAATTATT+TGG - chr2.3:3391508-3391527 None:intergenic 20.0%
!!! CTTAATTTTAGTTCTTGATT+TGG - chr2.3:3389569-3389588 None:intergenic 20.0%
!!! TGATATACATTTTTTTGGTT+AGG + chr2.3:3389905-3389924 MS.gene057038:intron 20.0%
! AAAACAACATGTACCATATT+AGG + chr2.3:3389461-3389480 MS.gene057038:CDS 25.0%
! AAAACCAATATTTCATTGGA+GGG + chr2.3:3390832-3390851 MS.gene057038:CDS 25.0%
! AAGAAATTCAAGTAATCTCT+CGG - chr2.3:3391107-3391126 None:intergenic 25.0%
! ACAGAAAAATAGAAGATTCA+TGG + chr2.3:3391211-3391230 MS.gene057038:CDS 25.0%
! ATATATATATGGCTTGATCA+TGG - chr2.3:3391573-3391592 None:intergenic 25.0%
! ATTAGGAAAATTCCAAATCA+AGG + chr2.3:3389478-3389497 MS.gene057038:CDS 25.0%
! ATTGAAGAAATAATAACAGG+AGG - chr2.3:3389139-3389158 None:intergenic 25.0%
! CACATTATAGAATATGTAGT+TGG - chr2.3:3389254-3389273 None:intergenic 25.0%
! CTGATCCTATTAGTATATAT+AGG - chr2.3:3391788-3391807 None:intergenic 25.0%
! GACATTGAAGAAATAATAAC+AGG - chr2.3:3389142-3389161 None:intergenic 25.0%
! GATGACCTATATATACTAAT+AGG + chr2.3:3391780-3391799 MS.gene057038:CDS 25.0%
! GATGTTTATAAAGCTATTGA+GGG + chr2.3:3389788-3389807 MS.gene057038:CDS 25.0%
! TTCAAACAATGAATGTTTCT+CGG - chr2.3:3390427-3390446 None:intergenic 25.0%
! TTTCCATTTATCAAGAACAA+AGG + chr2.3:3390186-3390205 MS.gene057038:CDS 25.0%
!! AATAGGAATGAGATTTTCTA+AGG - chr2.3:3390649-3390668 None:intergenic 25.0%
!! AGAGAAATTATGAGCTTTTT+GGG + chr2.3:3390369-3390388 MS.gene057038:CDS 25.0%
!! CTCCTATTAAGTTTTTGTAT+TGG - chr2.3:3391650-3391669 None:intergenic 25.0%
!! TAGCTAATTTTGAACAAAGA+TGG + chr2.3:3390583-3390602 MS.gene057038:CDS 25.0%
!!! ACAATGATGTATAAGTTGAT+TGG + chr2.3:3391047-3391066 MS.gene057038:CDS 25.0%
!!! GATTTGGAATTTTCCTAATA+TGG - chr2.3:3389477-3389496 None:intergenic 25.0%
ACAAGATTAAAGCAAGAGAA+AGG + chr2.3:3390931-3390950 MS.gene057038:CDS 30.0%
ACACCTTTGTTCTTGATAAA+TGG - chr2.3:3390192-3390211 None:intergenic 30.0%
ACATGCTAGAGAAATAAAGT+TGG + chr2.3:3390092-3390111 MS.gene057038:CDS 30.0%
AGTTAAACCAAGATCATGAA+TGG - chr2.3:3391726-3391745 None:intergenic 30.0%
ATTTAGTATATATTGCAGGC+TGG + chr2.3:3389819-3389838 MS.gene057038:CDS 30.0%
CAAGATAGACAATAAGAAAG+TGG + chr2.3:3389346-3389365 MS.gene057038:CDS 30.0%
CATGCTAGAGAAATAAAGTT+GGG + chr2.3:3390093-3390112 MS.gene057038:CDS 30.0%
GAAAACCAATATTTCATTGG+AGG + chr2.3:3390831-3390850 MS.gene057038:CDS 30.0%
GGATGTTTATAAAGCTATTG+AGG + chr2.3:3389787-3389806 MS.gene057038:CDS 30.0%
TAAGTAGTGAAGAGTTTCAA+GGG + chr2.3:3389642-3389661 MS.gene057038:CDS 30.0%
TAGATCCAAAATACGAGTAA+GGG + chr2.3:3391481-3391500 MS.gene057038:intron 30.0%
TATTTGTCTGGTAGAAATCA+TGG - chr2.3:3390473-3390492 None:intergenic 30.0%
TGTATATAGTCATACCAATG+TGG + chr2.3:3390961-3390980 MS.gene057038:CDS 30.0%
TGTTACAAGTATGACTATAG+AGG - chr2.3:3388973-3388992 None:intergenic 30.0%
TTAGATCCAAAATACGAGTA+AGG + chr2.3:3391480-3391499 MS.gene057038:intron 30.0%
TTCAATGTACACAAACCTAT+CGG - chr2.3:3390814-3390833 None:intergenic 30.0%
TTGAAAAAGAAAGCAGAAGA+AGG + chr2.3:3390123-3390142 MS.gene057038:CDS 30.0%
! AACTTTATTTCTCTAGCATG+TGG - chr2.3:3390093-3390112 None:intergenic 30.0%
! ACTTTATTTCTCTAGCATGT+GGG - chr2.3:3390092-3390111 None:intergenic 30.0%
! AGACTTTTGTACACAAAAGT+GGG + chr2.3:3391338-3391357 MS.gene057038:intron 30.0%
! ATTTCTTTTGCCTTGCAAAT+AGG + chr2.3:3391120-3391139 MS.gene057038:CDS 30.0%
! CAGAGAAATTATGAGCTTTT+TGG + chr2.3:3390368-3390387 MS.gene057038:CDS 30.0%
! TACCATTTTCCATTAGTAGA+GGG - chr2.3:3389544-3389563 None:intergenic 30.0%
! TAGACTTTTGTACACAAAAG+TGG + chr2.3:3391337-3391356 MS.gene057038:intron 30.0%
! TTACCATTTTCCATTAGTAG+AGG - chr2.3:3389545-3389564 None:intergenic 30.0%
! TTTCTTTTGCCTTGCAAATA+GGG + chr2.3:3391121-3391140 MS.gene057038:CDS 30.0%
!! CATTTTGTGTTACTATCATG+GGG - chr2.3:3392094-3392113 None:intergenic 30.0%
!! CCATTTTGTGTTACTATCAT+GGG - chr2.3:3392095-3392114 None:intergenic 30.0%
!! TCCATTTTGTGTTACTATCA+TGG - chr2.3:3392096-3392115 None:intergenic 30.0%
!!! ACATGTTGTTTTCAGTGTAA+TGG - chr2.3:3389453-3389472 None:intergenic 30.0%
!!! GTTTTTTGTCCAAATAAGAC+TGG + chr2.3:3389005-3389024 MS.gene057038:intron 30.0%
!!! TGTTGGTTTAATTGCAGTTT+TGG + chr2.3:3391283-3391302 MS.gene057038:intron 30.0%
AAATGTGAACCAAAGATCGA+TGG + chr2.3:3391809-3391828 MS.gene057038:CDS 35.0%
AACGAATCTTAGTATCAGCT+CGG + chr2.3:3389951-3389970 MS.gene057038:intron 35.0%
AAGGAAGACAGTTTGATCAA+TGG + chr2.3:3389512-3389531 MS.gene057038:CDS 35.0%
AAGTCTACAAATTTCGTGAG+CGG - chr2.3:3391324-3391343 None:intergenic 35.0%
ACACAAAAGTAGTATGCAGA+AGG + chr2.3:3390253-3390272 MS.gene057038:CDS 35.0%
ACATGACAATTAGACCTTTG+TGG - chr2.3:3389686-3389705 None:intergenic 35.0%
ACGAATACAGAATGTCAATG+TGG + chr2.3:3391919-3391938 MS.gene057038:CDS 35.0%
ACTCCACAATTATCAAAAGG+AGG - chr2.3:3389749-3389768 None:intergenic 35.0%
AGTAACACAAAATGGATCTG+TGG + chr2.3:3392100-3392119 MS.gene057038:CDS 35.0%
AGTATATATAGGTCATCCAC+TGG - chr2.3:3391777-3391796 None:intergenic 35.0%
ATATGTACCAGAACCATCTT+AGG - chr2.3:3389854-3389873 None:intergenic 35.0%
ATCTTGATTGTCACATAAGC+AGG - chr2.3:3389332-3389351 None:intergenic 35.0%
CAATGCAGTATATCTTGAAC+TGG - chr2.3:3391011-3391030 None:intergenic 35.0%
CACAATTATCAAAAGGAGGT+TGG - chr2.3:3389745-3389764 None:intergenic 35.0%
CAGTGAAGAAATTATGGACA+TGG + chr2.3:3392046-3392065 MS.gene057038:CDS 35.0%
CAGTTCAAGATATACTGCAT+TGG + chr2.3:3391009-3391028 MS.gene057038:CDS 35.0%
CCCATGATAGTAACACAAAA+TGG + chr2.3:3392092-3392111 MS.gene057038:CDS 35.0%
CTAAGTAGTGAAGAGTTTCA+AGG + chr2.3:3389641-3389660 MS.gene057038:CDS 35.0%
CTACAGCAGTGAAGAAATTA+TGG + chr2.3:3392040-3392059 MS.gene057038:CDS 35.0%
GAAAACACCATTCATGATCT+TGG + chr2.3:3391716-3391735 MS.gene057038:intron 35.0%
GAAGAAATTATGGACATGGA+GGG + chr2.3:3392050-3392069 MS.gene057038:CDS 35.0%
GATGATGAGCAAAGATTGTA+GGG - chr2.3:3390302-3390321 None:intergenic 35.0%
GCTCAATAGGAGATAAAATG+TGG + chr2.3:3392012-3392031 MS.gene057038:CDS 35.0%
GGAACTCCACAATTATCAAA+AGG - chr2.3:3389752-3389771 None:intergenic 35.0%
GGGAATTTGTCATGTAATCT+AGG - chr2.3:3390282-3390301 None:intergenic 35.0%
TAGGGAAAAGAAGGAAAATG+AGG + chr2.3:3391139-3391158 MS.gene057038:CDS 35.0%
TCATCAAAAAACCATAACCG+TGG + chr2.3:3390317-3390336 MS.gene057038:CDS 35.0%
TCATTAGAGCTCACATTGAA+GGG - chr2.3:3388874-3388893 None:intergenic 35.0%
TCTACCAGACAAATATTGCA+GGG + chr2.3:3390478-3390497 MS.gene057038:CDS 35.0%
TCTGTGGAAGATCTAACTAA+TGG + chr2.3:3392116-3392135 MS.gene057038:CDS 35.0%
TCTTATCTTTCTGCCACAAA+TGG - chr2.3:3390860-3390879 None:intergenic 35.0%
TGAAGAAATTATGGACATGG+AGG + chr2.3:3392049-3392068 MS.gene057038:CDS 35.0%
TGAATGTCACCTTTGCTTAT+GGG - chr2.3:3391900-3391919 None:intergenic 35.0%
TGCACACATTCTAAACTTTC+TGG - chr2.3:3391984-3392003 None:intergenic 35.0%
TGGAGTTCCTAGAAAGTTAT+GGG + chr2.3:3389763-3389782 MS.gene057038:CDS 35.0%
TTCATTAGAGCTCACATTGA+AGG - chr2.3:3388875-3388894 None:intergenic 35.0%
TTCCCTCTACTAATGGAAAA+TGG + chr2.3:3389539-3389558 MS.gene057038:CDS 35.0%
TTCTACCAGACAAATATTGC+AGG + chr2.3:3390477-3390496 MS.gene057038:CDS 35.0%
TTGTCCAAATAAGACTGGTA+GGG + chr2.3:3389010-3389029 MS.gene057038:intron 35.0%
TTTCAATCCTAAGATGGTTC+TGG + chr2.3:3389844-3389863 MS.gene057038:CDS 35.0%
TTTGTCCAAATAAGACTGGT+AGG + chr2.3:3389009-3389028 MS.gene057038:intron 35.0%
! AGTTTTCAGAGTTCGAACTT+TGG + chr2.3:3389112-3389131 MS.gene057038:intron 35.0%
! ATATGGCTTGATCATGGTTT+TGG - chr2.3:3391567-3391586 None:intergenic 35.0%
! ATTGGAAAGTGCAAGTATAC+CGG + chr2.3:3390697-3390716 MS.gene057038:CDS 35.0%
! ATTGTTTGAAACACTTGCTG+AGG + chr2.3:3390437-3390456 MS.gene057038:CDS 35.0%
! ATTTTCCATTAGTAGAGGGA+AGG - chr2.3:3389540-3389559 None:intergenic 35.0%
! CACACTGAATCTGAAATGTT+TGG - chr2.3:3389406-3389425 None:intergenic 35.0%
! GATACAAAAGCTCTAGTGAA+AGG + chr2.3:3392155-3392174 MS.gene057038:CDS 35.0%
! TGATGATGAGCAAAGATTGT+AGG - chr2.3:3390303-3390322 None:intergenic 35.0%
! TGTTTTCAGTGTAATGGTGA+TGG - chr2.3:3389447-3389466 None:intergenic 35.0%
! TTCACTAGAGCTTTTGTATC+AGG - chr2.3:3392155-3392174 None:intergenic 35.0%
!! CAACCTCCTTTTGATAATTG+TGG + chr2.3:3389743-3389762 MS.gene057038:CDS 35.0%
!! CTGTTAGCTTTCTAAACAGT+TGG - chr2.3:3390746-3390765 None:intergenic 35.0%
!! GAAATTATGAGCTTTTTGGG+TGG + chr2.3:3390372-3390391 MS.gene057038:CDS 35.0%
!!! AGATTTTCTAAGGTGTTTGC+AGG - chr2.3:3390639-3390658 None:intergenic 35.0%
!!! GATTTTCTAAGGTGTTTGCA+GGG - chr2.3:3390638-3390657 None:intergenic 35.0%
AAAGAAAGCAGAAGAAGGAG+TGG + chr2.3:3390128-3390147 MS.gene057038:CDS 40.0%
AAGCTTACGTCGAAGCAATA+AGG + chr2.3:3390784-3390803 MS.gene057038:CDS 40.0%
AAGGGAAATGAAGGAGAGTA+GGG - chr2.3:3388856-3388875 None:intergenic 40.0%
AATCAAGGCACAACAGTTGA+AGG + chr2.3:3389493-3389512 MS.gene057038:CDS 40.0%
AATCATACCTATCACGAGCT+TGG - chr2.3:3391249-3391268 None:intergenic 40.0%
ACATCCTCCCATAACTTTCT+AGG - chr2.3:3389773-3389792 None:intergenic 40.0%
ACCTTGAGTGCAATCTCAAT+AGG - chr2.3:3390906-3390925 None:intergenic 40.0%
AGTCTACAAATTTCGTGAGC+GGG - chr2.3:3391323-3391342 None:intergenic 40.0%
AGTTCCTAGAAAGTTATGGG+AGG + chr2.3:3389766-3389785 MS.gene057038:CDS 40.0%
ATCTTAGTATCAGCTCGGTT+TGG + chr2.3:3389956-3389975 MS.gene057038:intron 40.0%
ATGGTTCAAGCCAGCAAATT+TGG + chr2.3:3389598-3389617 MS.gene057038:CDS 40.0%
ATTGACAGAGTTAGGAGCTT+TGG - chr2.3:3390346-3390365 None:intergenic 40.0%
CAACAAGCACTTCTATGGAA+AGG + chr2.3:3390673-3390692 MS.gene057038:CDS 40.0%
CAACTCCATCTTGATGAAAC+TGG - chr2.3:3391872-3391891 None:intergenic 40.0%
CAACTTGGTTCCAAATTTGC+TGG - chr2.3:3389611-3389630 None:intergenic 40.0%
CACAAGAAAGTGAACGTGTT+TGG + chr2.3:3389378-3389397 MS.gene057038:CDS 40.0%
CCAACACAAGGATCGTATTA+AGG - chr2.3:3390039-3390058 None:intergenic 40.0%
CCTTAATACGATCCTTGTGT+TGG + chr2.3:3390036-3390055 MS.gene057038:intron 40.0%
CCTTGCAAATAGGGAAAAGA+AGG + chr2.3:3391130-3391149 MS.gene057038:CDS 40.0%
CGAGTAAGGGACCAAATAAT+TGG + chr2.3:3391494-3391513 MS.gene057038:intron 40.0%
CTACCAGACAAATATTGCAG+GGG + chr2.3:3390479-3390498 MS.gene057038:CDS 40.0%
CTATCATGGGGTAAGTTACT+AGG - chr2.3:3392082-3392101 None:intergenic 40.0%
CTCACATTGAAGGGAAATGA+AGG - chr2.3:3388865-3388884 None:intergenic 40.0%
CTCTTCCTGATACTCAATAC+TGG + chr2.3:3391183-3391202 MS.gene057038:CDS 40.0%
GATACTAAGATTCGTTGCAC+CGG - chr2.3:3389947-3389966 None:intergenic 40.0%
GCACTTCTATGGAAAGGAAT+TGG + chr2.3:3390679-3390698 MS.gene057038:CDS 40.0%
GCTCATTCATGGAACAATTG+AGG + chr2.3:3388810-3388829 MS.gene057038:CDS 40.0%
GGAAGATCTAACTAATGGTG+AGG + chr2.3:3392121-3392140 MS.gene057038:CDS 40.0%
GGAGAAGCAATCATAGAAAG+TGG + chr2.3:3391068-3391087 MS.gene057038:CDS 40.0%
GGCTGTAAGGGTTATGATTT+GGG + chr2.3:3390149-3390168 MS.gene057038:CDS 40.0%
GTGAATGTCACCTTTGCTTA+TGG - chr2.3:3391901-3391920 None:intergenic 40.0%
GTGGAGTTCCTAGAAAGTTA+TGG + chr2.3:3389762-3389781 MS.gene057038:CDS 40.0%
GTTGATCATCCCATAAGCAA+AGG + chr2.3:3391888-3391907 MS.gene057038:CDS 40.0%
TAGTTCAAGAAAATCGAGCC+TGG - chr2.3:3390003-3390022 None:intergenic 40.0%
TATTGAGATTGCACTCAAGG+TGG + chr2.3:3390905-3390924 MS.gene057038:CDS 40.0%
TCAAAAGGAGGTTGGAAAGT+AGG - chr2.3:3389737-3389756 None:intergenic 40.0%
TCAACTGTTGTGCCTTGATT+TGG - chr2.3:3389493-3389512 None:intergenic 40.0%
TCAATGTGGTATGAACACAC+TGG + chr2.3:3391933-3391952 MS.gene057038:CDS 40.0%
TCCTATTGAGATTGCACTCA+AGG + chr2.3:3390902-3390921 MS.gene057038:CDS 40.0%
TCTCTGTCATTGACAGAGTT+AGG - chr2.3:3390354-3390373 None:intergenic 40.0%
TGGCAGAAAGATAAGAACAG+TGG + chr2.3:3390864-3390883 MS.gene057038:CDS 40.0%
TGGCTGTAAGGGTTATGATT+TGG + chr2.3:3390148-3390167 MS.gene057038:CDS 40.0%
TGTCCAAATAAGACTGGTAG+GGG + chr2.3:3389011-3389030 MS.gene057038:intron 40.0%
TTCCTCAACAAGCACTTCTA+TGG + chr2.3:3390668-3390687 MS.gene057038:CDS 40.0%
TTGGATGATTCTACATCAGC+AGG - chr2.3:3391397-3391416 None:intergenic 40.0%
TTGTACACAAAAGTGGGACA+TGG + chr2.3:3391344-3391363 MS.gene057038:intron 40.0%
! CAGCAAATTTGGAACCAAGT+TGG + chr2.3:3389609-3389628 MS.gene057038:CDS 40.0%
! CAGTATTGAGTATCAGGAAG+AGG - chr2.3:3391185-3391204 None:intergenic 40.0%
! CCTTCTTTTCCCTATTTGCA+AGG - chr2.3:3391133-3391152 None:intergenic 40.0%
! CTGGTCTTTCAATCCTAAGA+TGG + chr2.3:3389838-3389857 MS.gene057038:CDS 40.0%
! GAAGTGCTTGTTGAGGAAAT+AGG - chr2.3:3390666-3390685 None:intergenic 40.0%
! TCTTGAACTGGTTCACTTTC+AGG - chr2.3:3390999-3391018 None:intergenic 40.0%
! TTGGTCCCTTACTCGTATTT+TGG - chr2.3:3391489-3391508 None:intergenic 40.0%
!! CTTAGTAGCTTTGTCCAACT+TGG - chr2.3:3389626-3389645 None:intergenic 40.0%
!! TTCCATAGAAGTGCTTGTTG+AGG - chr2.3:3390673-3390692 None:intergenic 40.0%
AAGTAATCTCTCGGATGTCC+TGG - chr2.3:3391098-3391117 None:intergenic 45.0%
AGAAGAAGGAGTGGCTGTAA+GGG + chr2.3:3390137-3390156 MS.gene057038:CDS 45.0%
AGGGACACAGAAATTGCGAT+CGG + chr2.3:3391840-3391859 MS.gene057038:CDS 45.0%
ATCATAGAAAGTGGTGAGCC+AGG + chr2.3:3391077-3391096 MS.gene057038:CDS 45.0%
CTGAGACATGATCAATCGAC+CGG - chr2.3:3390719-3390738 None:intergenic 45.0%
GAAGGGAAATGAAGGAGAGT+AGG - chr2.3:3388857-3388876 None:intergenic 45.0%
GAATCATTAGCGATTCAGCC+AGG + chr2.3:3389982-3390001 MS.gene057038:intron 45.0%
GAGGTTGGAAAGTAGGTGAA+TGG - chr2.3:3389730-3389749 None:intergenic 45.0%
GATGCTCATGCTTGTGTTAC+TGG + chr2.3:3390540-3390559 MS.gene057038:CDS 45.0%
GCATGTGGGATTTCTGTTTG+AGG - chr2.3:3390078-3390097 None:intergenic 45.0%
GGCACCCTCCAATGAAATAT+TGG - chr2.3:3390839-3390858 None:intergenic 45.0%
GGCTACCAGTTTCATCAAGA+TGG + chr2.3:3391864-3391883 MS.gene057038:CDS 45.0%
GGGATGCTACATTTCCACAA+AGG + chr2.3:3389669-3389688 MS.gene057038:CDS 45.0%
GGTGGTTTAGATTTGTGCGA+CGG + chr2.3:3390390-3390409 MS.gene057038:CDS 45.0%
GTATCAGGAAGAGGAGAATG+TGG - chr2.3:3391176-3391195 None:intergenic 45.0%
GTGAACCAAAGATCGATGGA+CGG + chr2.3:3391813-3391832 MS.gene057038:CDS 45.0%
GTGCAGAGAATGTGCTCAAT+AGG + chr2.3:3391999-3392018 MS.gene057038:CDS 45.0%
TAGCCCCTGCAATATTTGTC+TGG - chr2.3:3390485-3390504 None:intergenic 45.0%
TGAACCAAAGATCGATGGAC+GGG + chr2.3:3391814-3391833 MS.gene057038:CDS 45.0%
TGAAGAGTTTCAAGGGCTGA+GGG + chr2.3:3389649-3389668 MS.gene057038:CDS 45.0%
TGGATCCTTCCCTCTACTAA+TGG + chr2.3:3389532-3389551 MS.gene057038:CDS 45.0%
TGTGATGAACACACATGACG+AGG + chr2.3:3390209-3390228 MS.gene057038:CDS 45.0%
TTCTTGAACTAGACCACGAG+CGG + chr2.3:3390012-3390031 MS.gene057038:intron 45.0%
TTGCTTCGACGTAAGCTTCA+TGG - chr2.3:3390782-3390801 None:intergenic 45.0%
! AGCTTTGGTATCCACGGTTA+TGG - chr2.3:3390331-3390350 None:intergenic 45.0%
! GCACTCCAGTATTGAGTATC+AGG - chr2.3:3391191-3391210 None:intergenic 45.0%
! GTTAGGAGCTTTGGTATCCA+CGG - chr2.3:3390337-3390356 None:intergenic 45.0%
! GTTTTTGTTCCTTGCACCAG+TGG + chr2.3:3391758-3391777 MS.gene057038:intron 45.0%
! TCTGAAACAGACAGCTCAGT+TGG - chr2.3:3389175-3389194 None:intergenic 45.0%
!! AGTCCCCTACCAGTCTTATT+TGG - chr2.3:3389017-3389036 None:intergenic 45.0%
!!! AGGTTTTGAAACCACTGAGC+CGG + chr2.3:3389925-3389944 MS.gene057038:intron 45.0%
AAAGATCGATGGACGGGCAA+AGG + chr2.3:3391820-3391839 MS.gene057038:CDS 50.0%
AAGATCGATGGACGGGCAAA+GGG + chr2.3:3391821-3391840 MS.gene057038:CDS 50.0%
ATAGGTCATCCACTGGTGCA+AGG - chr2.3:3391770-3391789 None:intergenic 50.0%
ATCGTATTAAGGACCGCTCG+TGG - chr2.3:3390028-3390047 None:intergenic 50.0%
CAAGCATGAGCATCATGCCA+TGG - chr2.3:3390534-3390553 None:intergenic 50.0%
CAGAAGAAGGAGTGGCTGTA+AGG + chr2.3:3390136-3390155 MS.gene057038:CDS 50.0%
CTAACCTGCACACCAACACA+AGG - chr2.3:3390051-3390070 None:intergenic 50.0%
CTCTTGGACCTCCTTTGTTG+AGG - chr2.3:3390509-3390528 None:intergenic 50.0%
GACACAGAAATTGCGATCGG+AGG + chr2.3:3391843-3391862 MS.gene057038:CDS 50.0%
GTCATACCAATGTGGCCAGA+AGG + chr2.3:3390969-3390988 MS.gene057038:CDS 50.0%
GTGAAGAGTTTCAAGGGCTG+AGG + chr2.3:3389648-3389667 MS.gene057038:CDS 50.0%
GTTCACTCCAAGCTCGTGAT+AGG + chr2.3:3391239-3391258 MS.gene057038:CDS 50.0%
TCACTTTCAGGCACTCCTTC+TGG - chr2.3:3390987-3391006 None:intergenic 50.0%
TCAGGAAGAGGAGAATGTGG+TGG - chr2.3:3391173-3391192 None:intergenic 50.0%
TTTGCCCGTCCATCGATCTT+TGG - chr2.3:3391821-3391840 None:intergenic 50.0%
! AAGCAATAAGGCGTGCCGAT+AGG + chr2.3:3390796-3390815 MS.gene057038:CDS 50.0%
! TCATGCTTGTGTTACTGGCG+AGG + chr2.3:3390545-3390564 MS.gene057038:CDS 50.0%
!! TCATTGGAGGGTGCCATTTG+TGG + chr2.3:3390844-3390863 MS.gene057038:CDS 50.0%
AAGGAGGTCCAAGAGAGCCA+TGG + chr2.3:3390514-3390533 MS.gene057038:CDS 55.0%
GCATCATGCCATGGCTCTCT+TGG - chr2.3:3390525-3390544 None:intergenic 55.0%
! CGATCCTTGTGTTGGTGTGC+AGG + chr2.3:3390044-3390063 MS.gene057038:intron 55.0%
! TGCTTGTGTTACTGGCGAGG+CGG + chr2.3:3390548-3390567 MS.gene057038:CDS 55.0%
GGCACTCCTTCTGGCCACAT+TGG - chr2.3:3390978-3390997 None:intergenic 60.0%
TGTTACTGGCGAGGCGGCTT+GGG + chr2.3:3390554-3390573 MS.gene057038:CDS 60.0%
!! GATTCGTTGCACCGGCTCAG+TGG - chr2.3:3389939-3389958 None:intergenic 60.0%
!! GCAGGGGCTAGCCTCAACAA+AGG + chr2.3:3390495-3390514 MS.gene057038:CDS 60.0%
!! GGGGCTAGCCTCAACAAAGG+AGG + chr2.3:3390498-3390517 MS.gene057038:CDS 60.0%
! GTGTTACTGGCGAGGCGGCT+TGG + chr2.3:3390553-3390572 MS.gene057038:CDS 65.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 3388802 3392217 3388802 ID=MS.gene057038
chr2.3 mRNA 3388802 3392217 3388802 ID=MS.gene057038.t1;Parent=MS.gene057038
chr2.3 exon 3388802 3388879 3388802 ID=MS.gene057038.t1.exon1;Parent=MS.gene057038.t1
chr2.3 CDS 3388802 3388879 3388802 ID=cds.MS.gene057038.t1;Parent=MS.gene057038.t1
chr2.3 exon 3389308 3389865 3389308 ID=MS.gene057038.t1.exon2;Parent=MS.gene057038.t1
chr2.3 CDS 3389308 3389865 3389308 ID=cds.MS.gene057038.t1;Parent=MS.gene057038.t1
chr2.3 exon 3390066 3391260 3390066 ID=MS.gene057038.t1.exon3;Parent=MS.gene057038.t1
chr2.3 CDS 3390066 3391260 3390066 ID=cds.MS.gene057038.t1;Parent=MS.gene057038.t1
chr2.3 exon 3391778 3392217 3391778 ID=MS.gene057038.t1.exon4;Parent=MS.gene057038.t1
chr2.3 CDS 3391778 3392217 3391778 ID=cds.MS.gene057038.t1;Parent=MS.gene057038.t1
Gene Sequence

>MS.gene057038

ATGGATAAGCTCATTCATGGAACAATTGAGGCTACTGTCTTCAATGCAACTCCCTACTCTCCTTCATTTCCCTTCAATGTGAGCTCTAATGAACTCTTAAGATTAAATATATTATGATCCCTATAATATTGACAAAATTTGATCCTTCTCTTTATTTTTTTTTTTATTCCTCTATAGTCATACTTGTAACAATATTTTGTTTTGTTTTTTGTCCAAATAAGACTGGTAGGGGACTAAAAAGTAAAAATACACAACTTTATTAAATCTATGAAATGAAAATAATTTTTTTTATTGTTTATTGATAAATGTTAGTTTTCAGAGTTCGAACTTTGGACCTCCTGTTATTATTTCTTCAATGTCTCTTAGCTCACCAACTGAGCTGTCTGTTTCAGACTTAAATAAATAATTTGTTTATAGAGTTAAACTAAGCTTTGTCAATTTTATAGAAACCAACTACATATTCTATAATGTGAACTCATAAAATATGTCAATTTTTGTGTTTTCAGTGTTTATTTGTAAATGGAAAGCCTGCTTATGTGACAATCAAGATAGACAATAAGAAAGTGGCAAAAACAACACAAGAAAGTGAACGTGTTTGGAACCAAACATTTCAGATTCAGTGTGCTCATCTAGCTGATTCAACCATCACCATTACACTGAAAACAACATGTACCATATTAGGAAAATTCCAAATCAAGGCACAACAGTTGAAGGAAGACAGTTTGATCAATGGATCCTTCCCTCTACTAATGGAAAATGGTAAACCAAATCAAGAACTAAAATTAAGGTTTATATTATGGTTCAAGCCAGCAAATTTGGAACCAAGTTGGACAAAGCTACTAAGTAGTGAAGAGTTTCAAGGGCTGAGGGATGCTACATTTCCACAAAGGTCTAATTGTCATGTTAAGCTCTATCATGATGCTCACCATTCACCTACTTTCCAACCTCCTTTTGATAATTGTGGAGTTCCTAGAAAGTTATGGGAGGATGTTTATAAAGCTATTGAGGGTGCAAAATATTTAGTATATATTGCAGGCTGGTCTTTCAATCCTAAGATGGTTCTGGTACATATATAATCTCATTTCATACTCTACATTTTATATTGATATACATTTTTTTGGTTAGGTTTTGAAACCACTGAGCCGGTGCAACGAATCTTAGTATCAGCTCGGTTTGGAACGAATCATTAGCGATTCAGCCAGGCTCGATTTTCTTGAACTAGACCACGAGCGGTCCTTAATACGATCCTTGTGTTGGTGTGCAGGTTAGAGATCCTCAAACAGAAATCCCACATGCTAGAGAAATAAAGTTGGGCGAGCTATTGAAAAAGAAAGCAGAAGAAGGAGTGGCTGTAAGGGTTATGATTTGGGATGATGAAACATCATTTCCATTTATCAAGAACAAAGGTGTGATGAACACACATGACGAGGAAGCTTTTGCATACTTTAAACACACAAAAGTAGTATGCAGAAGGTGTCCTAGATTACATGACAAATTCCCTACAATCTTTGCTCATCATCAAAAAACCATAACCGTGGATACCAAAGCTCCTAACTCTGTCAATGACAGAGAAATTATGAGCTTTTTGGGTGGTTTAGATTTGTGCGACGGTCGATATGATACCGAGAAACATTCATTGTTTGAAACACTTGCTGAGGAATCACATTACCATGATTTCTACCAGACAAATATTGCAGGGGCTAGCCTCAACAAAGGAGGTCCAAGAGAGCCATGGCATGATGCTCATGCTTGTGTTACTGGCGAGGCGGCTTGGGATGTGTTAGCTAATTTTGAACAAAGATGGACAAAGCAATGTGATTCATCTCTTCTAGTCCCTGCAAACACCTTAGAAAATCTCATTCCTATTTCCTCAACAAGCACTTCTATGGAAAGGAATTGGAAAGTGCAAGTATACCGGTCGATTGATCATGTCTCAGCTAGCCAACTGTTTAGAAAGCTAACAGTTGAGAGTAGTATCCATGAAGCTTACGTCGAAGCAATAAGGCGTGCCGATAGGTTTGTGTACATTGAAAACCAATATTTCATTGGAGGGTGCCATTTGTGGCAGAAAGATAAGAACAGTGGATGCACAAATTTGATTCCTATTGAGATTGCACTCAAGGTGGTCAACAAGATTAAAGCAAGAGAAAGGTTTGCAGTGTATATAGTCATACCAATGTGGCCAGAAGGAGTGCCTGAAAGTGAACCAGTTCAAGATATACTGCATTGGACAAGAGAAACAATGACAATGATGTATAAGTTGATTGGAGAAGCAATCATAGAAAGTGGTGAGCCAGGACATCCGAGAGATTACTTGAATTTCTTTTGCCTTGCAAATAGGGAAAAGAAGGAAAATGAGGAATATCTTCCACCACATTCTCCTCTTCCTGATACTCAATACTGGAGTGCACAGAAAAATAGAAGATTCATGGTTTATGTTCACTCCAAGCTCGTGATAGGTATGATTAAACCATAAATATATGTTGGTTTAATTGCAGTTTTGGTCATCATATTTTCACCCGCTCACGAAATTTGTAGACTTTTGTACACAAAAGTGGGACATGGCAAATTTTCTATTGACGTGTCATAAAACCTGCTGATGTAGAATCATCCAAGTGAATTTATAATACATAGGTTTCTATGCCACGTCAATAAAAAAAAATTGTCATGTTGTCACTTTAGATCCAAAATACGAGTAAGGGACCAAATAATTGGATTTTAAAAGGAGGGATCGATTTCGTAAGCGAGAGAAAATAAGAAGACCAAAACCATGATCAAGCCATATATATATGTTCAACAACTAACTACTGTCACTATGTATGTTATTTTTAGCTATTCAACCTTTCCAATACAAAAACTTAATAGGAGTGATTTTTTACAATTAAATTCATTGCAATAACTCATTTTAGAAAGAGAAAACACCATTCATGATCTTGGTTTAACTAAAATGTGTTTTGTTTTTGTTCCTTGCACCAGTGGATGACCTATATATACTAATAGGATCAGCAAATGTGAACCAAAGATCGATGGACGGGCAAAGGGACACAGAAATTGCGATCGGAGGCTACCAGTTTCATCAAGATGGAGTTGATCATCCCATAAGCAAAGGTGACATTCACGAATACAGAATGTCAATGTGGTATGAACACACTGGTAGTGCTGAGAAGTTGTTTTTAGAGCCAGAAAGTTTAGAATGTGTGCAGAGAATGTGCTCAATAGGAGATAAAATGTGGAAAATCTACAGCAGTGAAGAAATTATGGACATGGAGGGTGTGCACCTAGTAACTTACCCCATGATAGTAACACAAAATGGATCTGTGGAAGATCTAACTAATGGTGAGGATCATTTTCCTGATACAAAAGCTCTAGTGAAAGGAACAAGATCAAAATTATTACCCTCTGTCATTACCACTTAG
Protein sequence

>MS.gene057038.t1

MDKLIHGTIEATVFNATPYSPSFPFNCLFVNGKPAYVTIKIDNKKVAKTTQESERVWNQTFQIQCAHLADSTITITLKTTCTILGKFQIKAQQLKEDSLINGSFPLLMENGKPNQELKLRFILWFKPANLEPSWTKLLSSEEFQGLRDATFPQRSNCHVKLYHDAHHSPTFQPPFDNCGVPRKLWEDVYKAIEGAKYLVYIAGWSFNPKMVLVRDPQTEIPHAREIKLGELLKKKAEEGVAVRVMIWDDETSFPFIKNKGVMNTHDEEAFAYFKHTKVVCRRCPRLHDKFPTIFAHHQKTITVDTKAPNSVNDREIMSFLGGLDLCDGRYDTEKHSLFETLAEESHYHDFYQTNIAGASLNKGGPREPWHDAHACVTGEAAWDVLANFEQRWTKQCDSSLLVPANTLENLIPISSTSTSMERNWKVQVYRSIDHVSASQLFRKLTVESSIHEAYVEAIRRADRFVYIENQYFIGGCHLWQKDKNSGCTNLIPIEIALKVVNKIKARERFAVYIVIPMWPEGVPESEPVQDILHWTRETMTMMYKLIGEAIIESGEPGHPRDYLNFFCLANREKKENEEYLPPHSPLPDTQYWSAQKNRRFMVYVHSKLVIVDDLYILIGSANVNQRSMDGQRDTEIAIGGYQFHQDGVDHPISKGDIHEYRMSMWYEHTGSAEKLFLEPESLECVQRMCSIGDKMWKIYSSEEIMDMEGVHLVTYPMIVTQNGSVEDLTNGEDHFPDTKALVKGTRSKLLPSVITT