Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057036.t1 | XP_003597621.1 | 99 | 610 | 6 | 0 | 1 | 610 | 1 | 610 | 0.00E+00 | 1274.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057036.t1 | Q9C888 | 63.6 | 618 | 210 | 7 | 3 | 610 | 8 | 620 | 6.6e-241 | 834.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057036.t1 | A2Q468 | 99.0 | 610 | 6 | 0 | 1 | 610 | 1 | 610 | 0.0e+00 | 1274.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene057036 | MS.gene057037 | 0.895624 | 8.03E-76 | -1.69E-46 |
MS.gene057036 | MS.gene057038 | 0.905394 | 4.49E-80 | -1.69E-46 |
MS.gene057036 | MS.gene36409 | 0.870576 | 1.31E-66 | -1.69E-46 |
MS.gene057036 | MS.gene50038 | 0.89889 | 3.41E-77 | -1.69E-46 |
MS.gene057036 | MS.gene85200 | 0.849735 | 2.67E-60 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene057036 | MS.gene034074 | PPI |
MS.gene057036 | MS.gene026763 | PPI |
MS.gene057036 | MS.gene86393 | PPI |
MS.gene057036 | MS.gene75365 | PPI |
MS.gene057036 | MS.gene60041 | PPI |
MS.gene057036 | MS.gene067395 | PPI |
MS.gene057036 | MS.gene89026 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057036.t1 | MTR_2g100250 | 99.016 | 610 | 6 | 0 | 1 | 610 | 1 | 610 | 0.0 | 1276 |
MS.gene057036.t1 | MTR_8g016160 | 76.355 | 609 | 138 | 2 | 4 | 611 | 7 | 610 | 0.0 | 984 |
MS.gene057036.t1 | MTR_2g103730 | 43.524 | 664 | 315 | 15 | 4 | 610 | 5 | 665 | 4.69e-166 | 494 |
MS.gene057036.t1 | MTR_3g107360 | 43.062 | 627 | 306 | 14 | 30 | 610 | 53 | 674 | 2.69e-164 | 490 |
MS.gene057036.t1 | MTR_3g107320 | 43.156 | 621 | 307 | 14 | 32 | 610 | 62 | 678 | 3.88e-162 | 484 |
MS.gene057036.t1 | MTR_4g010650 | 41.176 | 663 | 329 | 15 | 5 | 610 | 6 | 664 | 5.44e-159 | 476 |
MS.gene057036.t1 | MTR_5g011050 | 40.157 | 635 | 309 | 18 | 36 | 613 | 90 | 710 | 1.95e-136 | 419 |
MS.gene057036.t1 | MTR_5g011060 | 39.399 | 632 | 315 | 17 | 36 | 610 | 84 | 704 | 3.00e-133 | 410 |
MS.gene057036.t1 | MTR_8g033080 | 39.873 | 632 | 316 | 18 | 36 | 610 | 281 | 905 | 4.94e-131 | 410 |
MS.gene057036.t1 | MTR_5g023050 | 37.825 | 653 | 317 | 20 | 36 | 610 | 86 | 727 | 4.87e-130 | 403 |
MS.gene057036.t1 | MTR_7g075910 | 39.623 | 636 | 307 | 22 | 36 | 610 | 351 | 970 | 1.69e-129 | 407 |
MS.gene057036.t1 | MTR_3g114840 | 38.580 | 648 | 315 | 19 | 36 | 613 | 73 | 707 | 5.40e-127 | 393 |
MS.gene057036.t1 | MTR_3g114840 | 38.580 | 648 | 315 | 19 | 36 | 613 | 73 | 707 | 2.33e-126 | 393 |
MS.gene057036.t1 | MTR_8g088690 | 38.629 | 642 | 315 | 18 | 36 | 613 | 72 | 698 | 8.35e-126 | 391 |
MS.gene057036.t1 | MTR_8g033080 | 39.312 | 552 | 275 | 16 | 36 | 534 | 281 | 825 | 1.90e-109 | 348 |
MS.gene057036.t1 | MTR_1g083620 | 28.440 | 218 | 126 | 5 | 185 | 392 | 387 | 584 | 4.01e-16 | 82.8 |
MS.gene057036.t1 | MTR_1g083620 | 31.633 | 196 | 88 | 11 | 427 | 610 | 721 | 882 | 4.59e-11 | 66.6 |
MS.gene057036.t1 | MTR_1g083620 | 28.440 | 218 | 126 | 5 | 185 | 392 | 127 | 324 | 5.37e-16 | 82.4 |
MS.gene057036.t1 | MTR_1g083620 | 31.633 | 196 | 88 | 11 | 427 | 610 | 461 | 622 | 4.69e-11 | 66.2 |
MS.gene057036.t1 | MTR_2g435560 | 26.804 | 291 | 143 | 10 | 145 | 393 | 324 | 586 | 1.18e-15 | 81.3 |
MS.gene057036.t1 | MTR_2g435560 | 26.804 | 291 | 143 | 10 | 145 | 393 | 189 | 451 | 1.48e-15 | 80.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057036.t1 | AT1G55180 | 63.592 | 618 | 210 | 7 | 3 | 610 | 8 | 620 | 0.0 | 836 |
MS.gene057036.t1 | AT1G55180 | 63.468 | 594 | 202 | 7 | 27 | 610 | 10 | 598 | 0.0 | 801 |
MS.gene057036.t1 | AT1G52570 | 42.003 | 619 | 312 | 15 | 36 | 610 | 51 | 666 | 1.23e-155 | 468 |
MS.gene057036.t1 | AT1G52570 | 42.003 | 619 | 312 | 15 | 36 | 610 | 51 | 666 | 1.23e-155 | 468 |
MS.gene057036.t1 | AT1G52570 | 42.003 | 619 | 312 | 15 | 36 | 610 | 51 | 666 | 1.23e-155 | 468 |
MS.gene057036.t1 | AT3G15730 | 39.850 | 665 | 339 | 15 | 4 | 610 | 5 | 666 | 1.28e-155 | 468 |
MS.gene057036.t1 | AT5G25370 | 42.325 | 671 | 319 | 14 | 4 | 610 | 6 | 672 | 4.04e-154 | 464 |
MS.gene057036.t1 | AT5G25370 | 42.325 | 671 | 319 | 14 | 4 | 610 | 6 | 672 | 4.04e-154 | 464 |
MS.gene057036.t1 | AT5G25370 | 42.325 | 671 | 319 | 14 | 4 | 610 | 6 | 672 | 4.04e-154 | 464 |
MS.gene057036.t1 | AT5G25370 | 45.118 | 594 | 282 | 13 | 57 | 610 | 8 | 597 | 7.50e-149 | 448 |
MS.gene057036.t1 | AT4G11830 | 40.781 | 640 | 300 | 20 | 36 | 610 | 55 | 680 | 2.81e-137 | 421 |
MS.gene057036.t1 | AT4G11830 | 40.781 | 640 | 300 | 19 | 36 | 610 | 87 | 712 | 1.60e-136 | 419 |
MS.gene057036.t1 | AT4G11840 | 40.280 | 643 | 300 | 22 | 36 | 610 | 96 | 722 | 7.81e-133 | 410 |
MS.gene057036.t1 | AT2G42010 | 39.620 | 631 | 315 | 19 | 36 | 610 | 319 | 939 | 1.68e-131 | 412 |
MS.gene057036.t1 | AT4G11840 | 39.782 | 641 | 276 | 21 | 36 | 610 | 96 | 692 | 4.69e-131 | 405 |
MS.gene057036.t1 | AT4G11850 | 40.188 | 637 | 308 | 20 | 36 | 610 | 89 | 714 | 7.63e-131 | 405 |
MS.gene057036.t1 | AT2G42010 | 38.110 | 656 | 315 | 19 | 36 | 610 | 319 | 964 | 8.85e-128 | 403 |
MS.gene057036.t1 | AT4G35790 | 37.634 | 651 | 315 | 20 | 36 | 613 | 80 | 712 | 1.24e-126 | 394 |
MS.gene057036.t1 | AT4G00240 | 37.975 | 632 | 324 | 18 | 36 | 610 | 11 | 631 | 1.16e-125 | 389 |
MS.gene057036.t1 | AT4G00240 | 37.181 | 667 | 336 | 21 | 16 | 610 | 93 | 748 | 2.50e-125 | 391 |
MS.gene057036.t1 | AT4G35790 | 37.009 | 662 | 315 | 20 | 36 | 613 | 80 | 723 | 5.46e-125 | 390 |
MS.gene057036.t1 | AT4G00240 | 37.975 | 632 | 324 | 18 | 36 | 610 | 163 | 783 | 2.04e-124 | 390 |
MS.gene057036.t1 | AT4G35790 | 37.705 | 610 | 299 | 17 | 36 | 573 | 80 | 680 | 1.98e-123 | 380 |
MS.gene057036.t1 | AT4G11830 | 40.036 | 562 | 268 | 17 | 36 | 542 | 87 | 634 | 4.08e-116 | 360 |
MS.gene057036.t1 | AT4G11830 | 40.110 | 546 | 258 | 18 | 36 | 526 | 87 | 618 | 6.99e-111 | 346 |
MS.gene057036.t1 | AT3G16785 | 29.577 | 213 | 116 | 7 | 193 | 393 | 388 | 578 | 4.94e-15 | 79.3 |
MS.gene057036.t1 | AT3G16785 | 28.638 | 213 | 118 | 6 | 193 | 393 | 388 | 578 | 5.18e-15 | 79.3 |
MS.gene057036.t1 | AT3G16785 | 28.638 | 213 | 118 | 6 | 193 | 393 | 388 | 578 | 5.18e-15 | 79.3 |
MS.gene057036.t1 | AT3G16785 | 29.577 | 213 | 116 | 7 | 193 | 393 | 388 | 578 | 5.78e-15 | 79.3 |
MS.gene057036.t1 | AT3G16785 | 29.577 | 213 | 116 | 7 | 193 | 393 | 388 | 578 | 5.78e-15 | 79.3 |
MS.gene057036.t1 | AT3G16785 | 29.577 | 213 | 116 | 7 | 193 | 393 | 388 | 578 | 5.94e-15 | 79.3 |
MS.gene057036.t1 | AT3G05630 | 27.477 | 222 | 123 | 7 | 185 | 392 | 375 | 572 | 7.34e-14 | 75.5 |
Find 131 sgRNAs with CRISPR-Local
Find 180 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACACCTTTGTTCTTGATAAA+TGG | 0.146812 | 2.1:-4475270 | None:intergenic |
TCTTGAACTGGTTCACTTTC+AGG | 0.161180 | 2.1:-4476077 | None:intergenic |
TAAAATTAAGGTTTATATTA+TGG | 0.167823 | 2.1:+4474660 | MS.gene057036:CDS |
TTTCAGTGTTTATTTGTAAA+TGG | 0.237490 | 2.1:+4474383 | MS.gene057036:intron |
ATGGTTCAAGCCAGCAAATT+TGG | 0.246559 | 2.1:+4474679 | MS.gene057036:CDS |
TTCCTCAACAAGCACTTCTA+TGG | 0.258809 | 2.1:+4475749 | MS.gene057036:CDS |
TCACTTTCAGGCACTCCTTC+TGG | 0.260249 | 2.1:-4476065 | None:intergenic |
AAAACAACATGTACCATATT+AGG | 0.268038 | 2.1:+4474542 | MS.gene057036:CDS |
GATGCTCATGCTTGTGTTAC+TGG | 0.268529 | 2.1:+4475621 | MS.gene057036:CDS |
ACATCCTCCCATAACTTTCT+AGG | 0.271863 | 2.1:-4474851 | None:intergenic |
GGCACCCTCCAATGAAATAT+TGG | 0.278690 | 2.1:-4475917 | None:intergenic |
CAAATCAAGAACTAAAATTA+AGG | 0.279298 | 2.1:+4474648 | MS.gene057036:CDS |
CAACTTGGTTCCAAATTTGC+TGG | 0.292857 | 2.1:-4474689 | None:intergenic |
TCAACTGTTGTGCCTTGATT+TGG | 0.299930 | 2.1:-4474571 | None:intergenic |
TTGCTTCGACGTAAGCTTCA+TGG | 0.302186 | 2.1:-4475860 | None:intergenic |
TTCCCTCTACTAATGGAAAA+TGG | 0.318183 | 2.1:+4474620 | MS.gene057036:CDS |
TGGCTGTAAGGGTTATGATT+TGG | 0.320459 | 2.1:+4475229 | MS.gene057036:CDS |
ATATGTACCAGAACCATCTT+AGG | 0.324723 | 2.1:-4474932 | None:intergenic |
GGCTGTAAGGGTTATGATTT+GGG | 0.332421 | 2.1:+4475230 | MS.gene057036:CDS |
GTGTTACTGGCGAGGCGGCT+TGG | 0.335844 | 2.1:+4475634 | MS.gene057036:CDS |
TGGATCCTTCCCTCTACTAA+TGG | 0.347290 | 2.1:+4474613 | MS.gene057036:CDS |
GCACTCCAGTATTGAGTATC+AGG | 0.351096 | 2.1:-4476269 | None:intergenic |
TGTTACTGGCGAGGCGGCTT+GGG | 0.360313 | 2.1:+4475635 | MS.gene057036:CDS |
TCTCTGTCATTGACAGAGTT+AGG | 0.362506 | 2.1:-4475432 | None:intergenic |
TTTCAATCCTAAGATGGTTC+TGG | 0.364284 | 2.1:+4474925 | MS.gene057036:CDS |
ACATGACAATTAGACCTTTG+TGG | 0.370512 | 2.1:-4474764 | None:intergenic |
AGCTTTGGTATCCACGGTTA+TGG | 0.372953 | 2.1:-4475409 | None:intergenic |
ATTGACAGAGTTAGGAGCTT+TGG | 0.373133 | 2.1:-4475424 | None:intergenic |
ATTGAAAACCAATATTTCAT+TGG | 0.373278 | 2.1:+4475909 | MS.gene057036:CDS |
TTCAAACAATGAATGTTTCT+CGG | 0.374381 | 2.1:-4475505 | None:intergenic |
GCACTTCTATGGAAAGGAAT+TGG | 0.375461 | 2.1:+4475760 | MS.gene057036:CDS |
AAGCTTACGTCGAAGCAATA+AGG | 0.376408 | 2.1:+4475865 | MS.gene057036:CDS |
GAAGTGCTTGTTGAGGAAAT+AGG | 0.378292 | 2.1:-4475744 | None:intergenic |
CACAAGAAAGTGAACGTGTT+TGG | 0.380930 | 2.1:+4474459 | MS.gene057036:CDS |
GCATCATGCCATGGCTCTCT+TGG | 0.387236 | 2.1:-4475603 | None:intergenic |
TGGAGTTCCTAGAAAGTTAT+GGG | 0.388103 | 2.1:+4474844 | MS.gene057036:CDS |
CTCTTCCTGATACTCAATAC+TGG | 0.390043 | 2.1:+4476264 | MS.gene057036:CDS |
TGATGATGAGCAAAGATTGT+AGG | 0.400183 | 2.1:-4475381 | None:intergenic |
GGGAATTTGTCATGTAATCT+AGG | 0.401511 | 2.1:-4475360 | None:intergenic |
GTGGAGTTCCTAGAAAGTTA+TGG | 0.405314 | 2.1:+4474843 | MS.gene057036:CDS |
GGATGTTTATAAAGCTATTG+AGG | 0.411752 | 2.1:+4474868 | MS.gene057036:CDS |
CAGAAGAAGGAGTGGCTGTA+AGG | 0.414409 | 2.1:+4475217 | MS.gene057036:CDS |
TTCTACCAGACAAATATTGC+AGG | 0.419367 | 2.1:+4475558 | MS.gene057036:CDS |
AAGGGAAATGAAGGAGAGTA+GGG | 0.420361 | 2.1:-4473934 | None:intergenic |
CTTAGTAGCTTTGTCCAACT+TGG | 0.425327 | 2.1:-4474704 | None:intergenic |
GAAGGGAAATGAAGGAGAGT+AGG | 0.425566 | 2.1:-4473935 | None:intergenic |
GCATGTGGGATTTCTGTTTG+AGG | 0.436003 | 2.1:-4475156 | None:intergenic |
GTTCACTCCAAGCTCGTGAT+AGG | 0.437935 | 2.1:+4476320 | MS.gene057036:CDS |
TCATTGGAGGGTGCCATTTG+TGG | 0.442041 | 2.1:+4475925 | MS.gene057036:CDS |
GCAATGGATAAGCTCATTCA+TGG | 0.442063 | 2.1:+4473880 | None:intergenic |
GATGATGAGCAAAGATTGTA+GGG | 0.448753 | 2.1:-4475380 | None:intergenic |
ATCATAGAAAGTGGTGAGCC+AGG | 0.450323 | 2.1:+4476158 | MS.gene057036:CDS |
CACACTGAATCTGAAATGTT+TGG | 0.451106 | 2.1:-4474484 | None:intergenic |
CCTTGCAAATAGGGAAAAGA+AGG | 0.453199 | 2.1:+4476211 | MS.gene057036:CDS |
ATCTTGATTGTCACATAAGC+AGG | 0.455101 | 2.1:-4474410 | None:intergenic |
TCTTATCTTTCTGCCACAAA+TGG | 0.460881 | 2.1:-4475938 | None:intergenic |
TTCATTAGAGCTCACATTGA+AGG | 0.462875 | 2.1:-4473953 | None:intergenic |
AAATATTTAGTATATATTGC+AGG | 0.463860 | 2.1:+4474896 | MS.gene057036:CDS |
CTGGTCTTTCAATCCTAAGA+TGG | 0.467682 | 2.1:+4474919 | MS.gene057036:CDS |
TCAAAAGGAGGTTGGAAAGT+AGG | 0.467738 | 2.1:-4474815 | None:intergenic |
CAATGCAGTATATCTTGAAC+TGG | 0.467818 | 2.1:-4476089 | None:intergenic |
CACAATTATCAAAAGGAGGT+TGG | 0.476823 | 2.1:-4474823 | None:intergenic |
CTAAGTAGTGAAGAGTTTCA+AGG | 0.476881 | 2.1:+4474722 | MS.gene057036:CDS |
ACAAGATTAAAGCAAGAGAA+AGG | 0.477212 | 2.1:+4476012 | MS.gene057036:CDS |
CTGTTAGCTTTCTAAACAGT+TGG | 0.477520 | 2.1:-4475824 | None:intergenic |
TATTTGTCTGGTAGAAATCA+TGG | 0.479616 | 2.1:-4475551 | None:intergenic |
AAGGAAGACAGTTTGATCAA+TGG | 0.480801 | 2.1:+4474593 | MS.gene057036:CDS |
TCCTATTGAGATTGCACTCA+AGG | 0.481371 | 2.1:+4475983 | MS.gene057036:CDS |
AACTTTATTTCTCTAGCATG+TGG | 0.485581 | 2.1:-4475171 | None:intergenic |
TAGCCCCTGCAATATTTGTC+TGG | 0.486823 | 2.1:-4475563 | None:intergenic |
ATTAGGAAAATTCCAAATCA+AGG | 0.487446 | 2.1:+4474559 | MS.gene057036:CDS |
ACAATGATGTATAAGTTGAT+TGG | 0.489344 | 2.1:+4476128 | MS.gene057036:CDS |
GAAAACCAATATTTCATTGG+AGG | 0.491937 | 2.1:+4475912 | MS.gene057036:CDS |
ACCTTGAGTGCAATCTCAAT+AGG | 0.493010 | 2.1:-4475984 | None:intergenic |
GTGAAGAGTTTCAAGGGCTG+AGG | 0.494050 | 2.1:+4474729 | MS.gene057036:CDS |
AATCAAGGCACAACAGTTGA+AGG | 0.494105 | 2.1:+4474574 | MS.gene057036:CDS |
AAGTAATCTCTCGGATGTCC+TGG | 0.496223 | 2.1:-4476176 | None:intergenic |
AAAACCAATATTTCATTGGA+GGG | 0.496243 | 2.1:+4475913 | MS.gene057036:CDS |
CTCTTGGACCTCCTTTGTTG+AGG | 0.496416 | 2.1:-4475587 | None:intergenic |
GGAACTCCACAATTATCAAA+AGG | 0.498863 | 2.1:-4474830 | None:intergenic |
GGCACTCCTTCTGGCCACAT+TGG | 0.503394 | 2.1:-4476056 | None:intergenic |
AATCATACCTATCACGAGCT+TGG | 0.505438 | 2.1:-4476327 | None:intergenic |
CTCACATTGAAGGGAAATGA+AGG | 0.505783 | 2.1:-4473943 | None:intergenic |
AAGCAATAAGGCGTGCCGAT+AGG | 0.510171 | 2.1:+4475877 | MS.gene057036:CDS |
CAAGATAGACAATAAGAAAG+TGG | 0.515400 | 2.1:+4474427 | MS.gene057036:CDS |
AAGAAATTCAAGTAATCTCT+CGG | 0.518087 | 2.1:-4476185 | None:intergenic |
CAGTATTGAGTATCAGGAAG+AGG | 0.519004 | 2.1:-4476263 | None:intergenic |
CATGCTAGAGAAATAAAGTT+GGG | 0.529280 | 2.1:+4475174 | MS.gene057036:CDS |
GATGTTTATAAAGCTATTGA+GGG | 0.530650 | 2.1:+4474869 | MS.gene057036:CDS |
AGAAGAAGGAGTGGCTGTAA+GGG | 0.531289 | 2.1:+4475218 | MS.gene057036:CDS |
ACTTTATTTCTCTAGCATGT+GGG | 0.537734 | 2.1:-4475170 | None:intergenic |
ATTGGAAAGTGCAAGTATAC+CGG | 0.542544 | 2.1:+4475778 | MS.gene057036:CDS |
TCATTAGAGCTCACATTGAA+GGG | 0.542682 | 2.1:-4473952 | None:intergenic |
TAGGGAAAAGAAGGAAAATG+AGG | 0.551505 | 2.1:+4476220 | MS.gene057036:CDS |
CAGCAAATTTGGAACCAAGT+TGG | 0.555393 | 2.1:+4474690 | MS.gene057036:CDS |
ATTGTTTGAAACACTTGCTG+AGG | 0.558143 | 2.1:+4475518 | MS.gene057036:CDS |
GAGGTTGGAAAGTAGGTGAA+TGG | 0.561082 | 2.1:-4474808 | None:intergenic |
TCAGGAAGAGGAGAATGTGG+TGG | 0.569774 | 2.1:-4476251 | None:intergenic |
TTTCCATTTATCAAGAACAA+AGG | 0.570612 | 2.1:+4475267 | MS.gene057036:CDS |
ATTTAGTATATATTGCAGGC+TGG | 0.570668 | 2.1:+4474900 | MS.gene057036:CDS |
TTCAATGTACACAAACCTAT+CGG | 0.572544 | 2.1:-4475892 | None:intergenic |
GCTCATTCATGGAACAATTG+AGG | 0.574540 | 2.1:+4473891 | MS.gene057036:CDS |
ACATGCTAGAGAAATAAAGT+TGG | 0.574919 | 2.1:+4475173 | MS.gene057036:CDS |
CAACAAGCACTTCTATGGAA+AGG | 0.578353 | 2.1:+4475754 | MS.gene057036:CDS |
GTCATACCAATGTGGCCAGA+AGG | 0.580529 | 2.1:+4476050 | MS.gene057036:CDS |
TAAGTAGTGAAGAGTTTCAA+GGG | 0.580907 | 2.1:+4474723 | MS.gene057036:CDS |
GGAGAAGCAATCATAGAAAG+TGG | 0.580963 | 2.1:+4476149 | MS.gene057036:CDS |
GTTAGGAGCTTTGGTATCCA+CGG | 0.582477 | 2.1:-4475415 | None:intergenic |
TTCCATAGAAGTGCTTGTTG+AGG | 0.590769 | 2.1:-4475751 | None:intergenic |
GGTGGTTTAGATTTGTGCGA+CGG | 0.597565 | 2.1:+4475471 | MS.gene057036:CDS |
TCTACCAGACAAATATTGCA+GGG | 0.601616 | 2.1:+4475559 | MS.gene057036:CDS |
GTATCAGGAAGAGGAGAATG+TGG | 0.604673 | 2.1:-4476254 | None:intergenic |
TGAAGAGTTTCAAGGGCTGA+GGG | 0.609783 | 2.1:+4474730 | MS.gene057036:CDS |
CTGAGACATGATCAATCGAC+CGG | 0.610594 | 2.1:-4475797 | None:intergenic |
AAAGAAAGCAGAAGAAGGAG+TGG | 0.610818 | 2.1:+4475209 | MS.gene057036:CDS |
ACACAAAAGTAGTATGCAGA+AGG | 0.623210 | 2.1:+4475334 | MS.gene057036:CDS |
CAAGCATGAGCATCATGCCA+TGG | 0.632322 | 2.1:-4475612 | None:intergenic |
CAGTTCAAGATATACTGCAT+TGG | 0.636717 | 2.1:+4476090 | MS.gene057036:CDS |
CTACCAGACAAATATTGCAG+GGG | 0.640062 | 2.1:+4475560 | MS.gene057036:CDS |
ACTCCACAATTATCAAAAGG+AGG | 0.646785 | 2.1:-4474827 | None:intergenic |
AAGGAGGTCCAAGAGAGCCA+TGG | 0.649131 | 2.1:+4475595 | MS.gene057036:CDS |
TCATGCTTGTGTTACTGGCG+AGG | 0.655164 | 2.1:+4475626 | MS.gene057036:CDS |
GGGGCTAGCCTCAACAAAGG+AGG | 0.660504 | 2.1:+4475579 | MS.gene057036:CDS |
TGCTTGTGTTACTGGCGAGG+CGG | 0.660654 | 2.1:+4475629 | MS.gene057036:CDS |
GCAGGGGCTAGCCTCAACAA+AGG | 0.667195 | 2.1:+4475576 | MS.gene057036:CDS |
TGGCAGAAAGATAAGAACAG+TGG | 0.670376 | 2.1:+4475945 | MS.gene057036:CDS |
TGTGATGAACACACATGACG+AGG | 0.674406 | 2.1:+4475290 | MS.gene057036:CDS |
TATTGAGATTGCACTCAAGG+TGG | 0.678261 | 2.1:+4475986 | MS.gene057036:CDS |
AGTTCCTAGAAAGTTATGGG+AGG | 0.683421 | 2.1:+4474847 | MS.gene057036:CDS |
TGTATATAGTCATACCAATG+TGG | 0.699010 | 2.1:+4476042 | MS.gene057036:CDS |
GGGATGCTACATTTCCACAA+AGG | 0.704533 | 2.1:+4474750 | MS.gene057036:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAAAAAAAAAATAAAGAGA+AGG | - | chr2.1:4474029-4474048 | None:intergenic | 10.0% |
!! | TAAAATTAAGGTTTATATTA+TGG | + | chr2.1:4474660-4474679 | MS.gene057036:CDS | 10.0% |
!!! | TATATTGATATACATTTTTT+TGG | + | chr2.1:4474981-4475000 | MS.gene057036:intron | 10.0% |
!! | AAATATTTAGTATATATTGC+AGG | + | chr2.1:4474896-4474915 | MS.gene057036:CDS | 15.0% |
!!! | CAAATTTTGTCAATATTATA+GGG | - | chr2.1:4474004-4474023 | None:intergenic | 15.0% |
!!! | TCAAATTTTGTCAATATTAT+AGG | - | chr2.1:4474005-4474024 | None:intergenic | 15.0% |
!! | ATTGAAAACCAATATTTCAT+TGG | + | chr2.1:4475909-4475928 | MS.gene057036:CDS | 20.0% |
!! | CAAATCAAGAACTAAAATTA+AGG | + | chr2.1:4474648-4474667 | MS.gene057036:CDS | 20.0% |
!! | TTTCAGTGTTTATTTGTAAA+TGG | + | chr2.1:4474383-4474402 | MS.gene057036:intron | 20.0% |
!!! | CTTAATTTTAGTTCTTGATT+TGG | - | chr2.1:4474650-4474669 | None:intergenic | 20.0% |
!!! | TGATATACATTTTTTTGGTT+AGG | + | chr2.1:4474986-4475005 | MS.gene057036:intron | 20.0% |
! | AAAACAACATGTACCATATT+AGG | + | chr2.1:4474542-4474561 | MS.gene057036:CDS | 25.0% |
! | AAAACCAATATTTCATTGGA+GGG | + | chr2.1:4475913-4475932 | MS.gene057036:CDS | 25.0% |
! | AAGAAATTCAAGTAATCTCT+CGG | - | chr2.1:4476188-4476207 | None:intergenic | 25.0% |
! | ACAGAAAAATAGAAGATTCA+TGG | + | chr2.1:4476292-4476311 | MS.gene057036:CDS | 25.0% |
! | ATTAGGAAAATTCCAAATCA+AGG | + | chr2.1:4474559-4474578 | MS.gene057036:CDS | 25.0% |
! | ATTGAAGAAATAATAACAGG+AGG | - | chr2.1:4474220-4474239 | None:intergenic | 25.0% |
! | CACATTATAGAATATGTAGT+TGG | - | chr2.1:4474335-4474354 | None:intergenic | 25.0% |
! | GACATTGAAGAAATAATAAC+AGG | - | chr2.1:4474223-4474242 | None:intergenic | 25.0% |
! | GATGTTTATAAAGCTATTGA+GGG | + | chr2.1:4474869-4474888 | MS.gene057036:CDS | 25.0% |
! | TTCAAACAATGAATGTTTCT+CGG | - | chr2.1:4475508-4475527 | None:intergenic | 25.0% |
! | TTTCCATTTATCAAGAACAA+AGG | + | chr2.1:4475267-4475286 | MS.gene057036:CDS | 25.0% |
!! | AATAGGAATGAGATTTTCTA+AGG | - | chr2.1:4475730-4475749 | None:intergenic | 25.0% |
!! | AGAGAAATTATGAGCTTTTT+GGG | + | chr2.1:4475450-4475469 | MS.gene057036:CDS | 25.0% |
!! | TAGCTAATTTTGAACAAAGA+TGG | + | chr2.1:4475664-4475683 | MS.gene057036:CDS | 25.0% |
!!! | ACAATGATGTATAAGTTGAT+TGG | + | chr2.1:4476128-4476147 | MS.gene057036:CDS | 25.0% |
!!! | GATTTGGAATTTTCCTAATA+TGG | - | chr2.1:4474558-4474577 | None:intergenic | 25.0% |
ACAAGATTAAAGCAAGAGAA+AGG | + | chr2.1:4476012-4476031 | MS.gene057036:CDS | 30.0% | |
ACACCTTTGTTCTTGATAAA+TGG | - | chr2.1:4475273-4475292 | None:intergenic | 30.0% | |
ACATGCTAGAGAAATAAAGT+TGG | + | chr2.1:4475173-4475192 | MS.gene057036:CDS | 30.0% | |
ATTTAGTATATATTGCAGGC+TGG | + | chr2.1:4474900-4474919 | MS.gene057036:CDS | 30.0% | |
CAAGATAGACAATAAGAAAG+TGG | + | chr2.1:4474427-4474446 | MS.gene057036:CDS | 30.0% | |
CATGCTAGAGAAATAAAGTT+GGG | + | chr2.1:4475174-4475193 | MS.gene057036:CDS | 30.0% | |
GAAAACCAATATTTCATTGG+AGG | + | chr2.1:4475912-4475931 | MS.gene057036:CDS | 30.0% | |
GGATGTTTATAAAGCTATTG+AGG | + | chr2.1:4474868-4474887 | MS.gene057036:CDS | 30.0% | |
TAAGTAGTGAAGAGTTTCAA+GGG | + | chr2.1:4474723-4474742 | MS.gene057036:CDS | 30.0% | |
TATTTGTCTGGTAGAAATCA+TGG | - | chr2.1:4475554-4475573 | None:intergenic | 30.0% | |
TGTATATAGTCATACCAATG+TGG | + | chr2.1:4476042-4476061 | MS.gene057036:CDS | 30.0% | |
TGTTACAAGTATGACTATAG+AGG | - | chr2.1:4474054-4474073 | None:intergenic | 30.0% | |
TTCAATGTACACAAACCTAT+CGG | - | chr2.1:4475895-4475914 | None:intergenic | 30.0% | |
TTGAAAAAGAAAGCAGAAGA+AGG | + | chr2.1:4475204-4475223 | MS.gene057036:CDS | 30.0% | |
! | AACTTTATTTCTCTAGCATG+TGG | - | chr2.1:4475174-4475193 | None:intergenic | 30.0% |
! | ACTTTATTTCTCTAGCATGT+GGG | - | chr2.1:4475173-4475192 | None:intergenic | 30.0% |
! | ATTTCTTTTGCCTTGCAAAT+AGG | + | chr2.1:4476201-4476220 | MS.gene057036:CDS | 30.0% |
! | CAGAGAAATTATGAGCTTTT+TGG | + | chr2.1:4475449-4475468 | MS.gene057036:CDS | 30.0% |
! | TACCATTTTCCATTAGTAGA+GGG | - | chr2.1:4474625-4474644 | None:intergenic | 30.0% |
! | TTACCATTTTCCATTAGTAG+AGG | - | chr2.1:4474626-4474645 | None:intergenic | 30.0% |
! | TTTCTTTTGCCTTGCAAATA+GGG | + | chr2.1:4476202-4476221 | MS.gene057036:CDS | 30.0% |
!!! | ACATGTTGTTTTCAGTGTAA+TGG | - | chr2.1:4474534-4474553 | None:intergenic | 30.0% |
!!! | GTTTTTTGTCCAAATAAGAC+TGG | + | chr2.1:4474086-4474105 | MS.gene057036:intron | 30.0% |
AACGAATCTTAGTATCAGCT+CGG | + | chr2.1:4475032-4475051 | MS.gene057036:intron | 35.0% | |
AAGGAAGACAGTTTGATCAA+TGG | + | chr2.1:4474593-4474612 | MS.gene057036:CDS | 35.0% | |
ACACAAAAGTAGTATGCAGA+AGG | + | chr2.1:4475334-4475353 | MS.gene057036:CDS | 35.0% | |
ACATGACAATTAGACCTTTG+TGG | - | chr2.1:4474767-4474786 | None:intergenic | 35.0% | |
ACTCCACAATTATCAAAAGG+AGG | - | chr2.1:4474830-4474849 | None:intergenic | 35.0% | |
ATATGTACCAGAACCATCTT+AGG | - | chr2.1:4474935-4474954 | None:intergenic | 35.0% | |
ATCTTGATTGTCACATAAGC+AGG | - | chr2.1:4474413-4474432 | None:intergenic | 35.0% | |
CAATGCAGTATATCTTGAAC+TGG | - | chr2.1:4476092-4476111 | None:intergenic | 35.0% | |
CACAATTATCAAAAGGAGGT+TGG | - | chr2.1:4474826-4474845 | None:intergenic | 35.0% | |
CAGTTCAAGATATACTGCAT+TGG | + | chr2.1:4476090-4476109 | MS.gene057036:CDS | 35.0% | |
CTAAGTAGTGAAGAGTTTCA+AGG | + | chr2.1:4474722-4474741 | MS.gene057036:CDS | 35.0% | |
GATGATGAGCAAAGATTGTA+GGG | - | chr2.1:4475383-4475402 | None:intergenic | 35.0% | |
GGAACTCCACAATTATCAAA+AGG | - | chr2.1:4474833-4474852 | None:intergenic | 35.0% | |
GGGAATTTGTCATGTAATCT+AGG | - | chr2.1:4475363-4475382 | None:intergenic | 35.0% | |
TAGGGAAAAGAAGGAAAATG+AGG | + | chr2.1:4476220-4476239 | MS.gene057036:CDS | 35.0% | |
TCATCAAAAAACCATAACCG+TGG | + | chr2.1:4475398-4475417 | MS.gene057036:CDS | 35.0% | |
TCATTAGAGCTCACATTGAA+GGG | - | chr2.1:4473955-4473974 | None:intergenic | 35.0% | |
TCTACCAGACAAATATTGCA+GGG | + | chr2.1:4475559-4475578 | MS.gene057036:CDS | 35.0% | |
TCTTATCTTTCTGCCACAAA+TGG | - | chr2.1:4475941-4475960 | None:intergenic | 35.0% | |
TGGAGTTCCTAGAAAGTTAT+GGG | + | chr2.1:4474844-4474863 | MS.gene057036:CDS | 35.0% | |
TTCATTAGAGCTCACATTGA+AGG | - | chr2.1:4473956-4473975 | None:intergenic | 35.0% | |
TTCCCTCTACTAATGGAAAA+TGG | + | chr2.1:4474620-4474639 | MS.gene057036:CDS | 35.0% | |
TTCTACCAGACAAATATTGC+AGG | + | chr2.1:4475558-4475577 | MS.gene057036:CDS | 35.0% | |
TTGTCCAAATAAGACTGGTA+GGG | + | chr2.1:4474091-4474110 | MS.gene057036:intron | 35.0% | |
TTTCAATCCTAAGATGGTTC+TGG | + | chr2.1:4474925-4474944 | MS.gene057036:CDS | 35.0% | |
TTTGTCCAAATAAGACTGGT+AGG | + | chr2.1:4474090-4474109 | MS.gene057036:intron | 35.0% | |
! | AGTTTTCAGAGTTCGAACTT+TGG | + | chr2.1:4474193-4474212 | MS.gene057036:intron | 35.0% |
! | ATTGGAAAGTGCAAGTATAC+CGG | + | chr2.1:4475778-4475797 | MS.gene057036:CDS | 35.0% |
! | ATTGTTTGAAACACTTGCTG+AGG | + | chr2.1:4475518-4475537 | MS.gene057036:CDS | 35.0% |
! | ATTTTCCATTAGTAGAGGGA+AGG | - | chr2.1:4474621-4474640 | None:intergenic | 35.0% |
! | CACACTGAATCTGAAATGTT+TGG | - | chr2.1:4474487-4474506 | None:intergenic | 35.0% |
! | TGATGATGAGCAAAGATTGT+AGG | - | chr2.1:4475384-4475403 | None:intergenic | 35.0% |
! | TGTTTTCAGTGTAATGGTGA+TGG | - | chr2.1:4474528-4474547 | None:intergenic | 35.0% |
!! | CAACCTCCTTTTGATAATTG+TGG | + | chr2.1:4474824-4474843 | MS.gene057036:CDS | 35.0% |
!! | CTGTTAGCTTTCTAAACAGT+TGG | - | chr2.1:4475827-4475846 | None:intergenic | 35.0% |
!! | GAAATTATGAGCTTTTTGGG+TGG | + | chr2.1:4475453-4475472 | MS.gene057036:CDS | 35.0% |
!!! | AGATTTTCTAAGGTGTTTGC+AGG | - | chr2.1:4475720-4475739 | None:intergenic | 35.0% |
!!! | GATTTTCTAAGGTGTTTGCA+GGG | - | chr2.1:4475719-4475738 | None:intergenic | 35.0% |
AAAGAAAGCAGAAGAAGGAG+TGG | + | chr2.1:4475209-4475228 | MS.gene057036:CDS | 40.0% | |
AAGCTTACGTCGAAGCAATA+AGG | + | chr2.1:4475865-4475884 | MS.gene057036:CDS | 40.0% | |
AAGGGAAATGAAGGAGAGTA+GGG | - | chr2.1:4473937-4473956 | None:intergenic | 40.0% | |
AATCAAGGCACAACAGTTGA+AGG | + | chr2.1:4474574-4474593 | MS.gene057036:CDS | 40.0% | |
AATCATACCTATCACGAGCT+TGG | - | chr2.1:4476330-4476349 | None:intergenic | 40.0% | |
ACATCCTCCCATAACTTTCT+AGG | - | chr2.1:4474854-4474873 | None:intergenic | 40.0% | |
ACCTTGAGTGCAATCTCAAT+AGG | - | chr2.1:4475987-4476006 | None:intergenic | 40.0% | |
AGTTCCTAGAAAGTTATGGG+AGG | + | chr2.1:4474847-4474866 | MS.gene057036:CDS | 40.0% | |
ATCTTAGTATCAGCTCGGTT+TGG | + | chr2.1:4475037-4475056 | MS.gene057036:intron | 40.0% | |
ATGGTTCAAGCCAGCAAATT+TGG | + | chr2.1:4474679-4474698 | MS.gene057036:CDS | 40.0% | |
ATTGACAGAGTTAGGAGCTT+TGG | - | chr2.1:4475427-4475446 | None:intergenic | 40.0% | |
CAACAAGCACTTCTATGGAA+AGG | + | chr2.1:4475754-4475773 | MS.gene057036:CDS | 40.0% | |
CAACTTGGTTCCAAATTTGC+TGG | - | chr2.1:4474692-4474711 | None:intergenic | 40.0% | |
CACAAGAAAGTGAACGTGTT+TGG | + | chr2.1:4474459-4474478 | MS.gene057036:CDS | 40.0% | |
CCAACACAAGGATCGTATTA+AGG | - | chr2.1:4475120-4475139 | None:intergenic | 40.0% | |
CCTTAATACGATCCTTGTGT+TGG | + | chr2.1:4475117-4475136 | MS.gene057036:intron | 40.0% | |
CCTTGCAAATAGGGAAAAGA+AGG | + | chr2.1:4476211-4476230 | MS.gene057036:CDS | 40.0% | |
CTACCAGACAAATATTGCAG+GGG | + | chr2.1:4475560-4475579 | MS.gene057036:CDS | 40.0% | |
CTCACATTGAAGGGAAATGA+AGG | - | chr2.1:4473946-4473965 | None:intergenic | 40.0% | |
CTCTTCCTGATACTCAATAC+TGG | + | chr2.1:4476264-4476283 | MS.gene057036:CDS | 40.0% | |
GATACTAAGATTCGTTGCAC+CGG | - | chr2.1:4475028-4475047 | None:intergenic | 40.0% | |
GCACTTCTATGGAAAGGAAT+TGG | + | chr2.1:4475760-4475779 | MS.gene057036:CDS | 40.0% | |
GCTCATTCATGGAACAATTG+AGG | + | chr2.1:4473891-4473910 | MS.gene057036:CDS | 40.0% | |
GGAGAAGCAATCATAGAAAG+TGG | + | chr2.1:4476149-4476168 | MS.gene057036:CDS | 40.0% | |
GGCTGTAAGGGTTATGATTT+GGG | + | chr2.1:4475230-4475249 | MS.gene057036:CDS | 40.0% | |
GTGGAGTTCCTAGAAAGTTA+TGG | + | chr2.1:4474843-4474862 | MS.gene057036:CDS | 40.0% | |
TAGTTCAAGAAAATCGAGCC+TGG | - | chr2.1:4475084-4475103 | None:intergenic | 40.0% | |
TATTGAGATTGCACTCAAGG+TGG | + | chr2.1:4475986-4476005 | MS.gene057036:CDS | 40.0% | |
TCAAAAGGAGGTTGGAAAGT+AGG | - | chr2.1:4474818-4474837 | None:intergenic | 40.0% | |
TCAACTGTTGTGCCTTGATT+TGG | - | chr2.1:4474574-4474593 | None:intergenic | 40.0% | |
TCCTATTGAGATTGCACTCA+AGG | + | chr2.1:4475983-4476002 | MS.gene057036:CDS | 40.0% | |
TCTCTGTCATTGACAGAGTT+AGG | - | chr2.1:4475435-4475454 | None:intergenic | 40.0% | |
TGGCAGAAAGATAAGAACAG+TGG | + | chr2.1:4475945-4475964 | MS.gene057036:CDS | 40.0% | |
TGGCTGTAAGGGTTATGATT+TGG | + | chr2.1:4475229-4475248 | MS.gene057036:CDS | 40.0% | |
TGTCCAAATAAGACTGGTAG+GGG | + | chr2.1:4474092-4474111 | MS.gene057036:intron | 40.0% | |
TTCCTCAACAAGCACTTCTA+TGG | + | chr2.1:4475749-4475768 | MS.gene057036:CDS | 40.0% | |
! | CAGCAAATTTGGAACCAAGT+TGG | + | chr2.1:4474690-4474709 | MS.gene057036:CDS | 40.0% |
! | CAGTATTGAGTATCAGGAAG+AGG | - | chr2.1:4476266-4476285 | None:intergenic | 40.0% |
! | CCTTCTTTTCCCTATTTGCA+AGG | - | chr2.1:4476214-4476233 | None:intergenic | 40.0% |
! | CTGGTCTTTCAATCCTAAGA+TGG | + | chr2.1:4474919-4474938 | MS.gene057036:CDS | 40.0% |
! | GAAGTGCTTGTTGAGGAAAT+AGG | - | chr2.1:4475747-4475766 | None:intergenic | 40.0% |
! | TCTTGAACTGGTTCACTTTC+AGG | - | chr2.1:4476080-4476099 | None:intergenic | 40.0% |
!! | CTTAGTAGCTTTGTCCAACT+TGG | - | chr2.1:4474707-4474726 | None:intergenic | 40.0% |
!! | TTCCATAGAAGTGCTTGTTG+AGG | - | chr2.1:4475754-4475773 | None:intergenic | 40.0% |
AAGTAATCTCTCGGATGTCC+TGG | - | chr2.1:4476179-4476198 | None:intergenic | 45.0% | |
AGAAGAAGGAGTGGCTGTAA+GGG | + | chr2.1:4475218-4475237 | MS.gene057036:CDS | 45.0% | |
ATCATAGAAAGTGGTGAGCC+AGG | + | chr2.1:4476158-4476177 | MS.gene057036:CDS | 45.0% | |
CTGAGACATGATCAATCGAC+CGG | - | chr2.1:4475800-4475819 | None:intergenic | 45.0% | |
GAAGGGAAATGAAGGAGAGT+AGG | - | chr2.1:4473938-4473957 | None:intergenic | 45.0% | |
GAATCATTAGCGATTCAGCC+AGG | + | chr2.1:4475063-4475082 | MS.gene057036:intron | 45.0% | |
GAGGTTGGAAAGTAGGTGAA+TGG | - | chr2.1:4474811-4474830 | None:intergenic | 45.0% | |
GATGCTCATGCTTGTGTTAC+TGG | + | chr2.1:4475621-4475640 | MS.gene057036:CDS | 45.0% | |
GCATGTGGGATTTCTGTTTG+AGG | - | chr2.1:4475159-4475178 | None:intergenic | 45.0% | |
GGCACCCTCCAATGAAATAT+TGG | - | chr2.1:4475920-4475939 | None:intergenic | 45.0% | |
GGGATGCTACATTTCCACAA+AGG | + | chr2.1:4474750-4474769 | MS.gene057036:CDS | 45.0% | |
GGTGGTTTAGATTTGTGCGA+CGG | + | chr2.1:4475471-4475490 | MS.gene057036:CDS | 45.0% | |
GTATCAGGAAGAGGAGAATG+TGG | - | chr2.1:4476257-4476276 | None:intergenic | 45.0% | |
TAGCCCCTGCAATATTTGTC+TGG | - | chr2.1:4475566-4475585 | None:intergenic | 45.0% | |
TGAAGAGTTTCAAGGGCTGA+GGG | + | chr2.1:4474730-4474749 | MS.gene057036:CDS | 45.0% | |
TGGATCCTTCCCTCTACTAA+TGG | + | chr2.1:4474613-4474632 | MS.gene057036:CDS | 45.0% | |
TGTGATGAACACACATGACG+AGG | + | chr2.1:4475290-4475309 | MS.gene057036:CDS | 45.0% | |
TTCTTGAACTAGACCACGAG+CGG | + | chr2.1:4475093-4475112 | MS.gene057036:intron | 45.0% | |
TTGCTTCGACGTAAGCTTCA+TGG | - | chr2.1:4475863-4475882 | None:intergenic | 45.0% | |
! | AGCTTTGGTATCCACGGTTA+TGG | - | chr2.1:4475412-4475431 | None:intergenic | 45.0% |
! | GCACTCCAGTATTGAGTATC+AGG | - | chr2.1:4476272-4476291 | None:intergenic | 45.0% |
! | GTTAGGAGCTTTGGTATCCA+CGG | - | chr2.1:4475418-4475437 | None:intergenic | 45.0% |
! | TCTGAAACAGACAGCTCAGT+TGG | - | chr2.1:4474256-4474275 | None:intergenic | 45.0% |
!! | AGTCCCCTACCAGTCTTATT+TGG | - | chr2.1:4474098-4474117 | None:intergenic | 45.0% |
!!! | AGGTTTTGAAACCACTGAGC+CGG | + | chr2.1:4475006-4475025 | MS.gene057036:intron | 45.0% |
ATCGTATTAAGGACCGCTCG+TGG | - | chr2.1:4475109-4475128 | None:intergenic | 50.0% | |
CAAGCATGAGCATCATGCCA+TGG | - | chr2.1:4475615-4475634 | None:intergenic | 50.0% | |
CAGAAGAAGGAGTGGCTGTA+AGG | + | chr2.1:4475217-4475236 | MS.gene057036:CDS | 50.0% | |
CTAACCTGCACACCAACACA+AGG | - | chr2.1:4475132-4475151 | None:intergenic | 50.0% | |
CTCTTGGACCTCCTTTGTTG+AGG | - | chr2.1:4475590-4475609 | None:intergenic | 50.0% | |
GTCATACCAATGTGGCCAGA+AGG | + | chr2.1:4476050-4476069 | MS.gene057036:CDS | 50.0% | |
GTGAAGAGTTTCAAGGGCTG+AGG | + | chr2.1:4474729-4474748 | MS.gene057036:CDS | 50.0% | |
GTTCACTCCAAGCTCGTGAT+AGG | + | chr2.1:4476320-4476339 | MS.gene057036:CDS | 50.0% | |
TCACTTTCAGGCACTCCTTC+TGG | - | chr2.1:4476068-4476087 | None:intergenic | 50.0% | |
TCAGGAAGAGGAGAATGTGG+TGG | - | chr2.1:4476254-4476273 | None:intergenic | 50.0% | |
! | AAGCAATAAGGCGTGCCGAT+AGG | + | chr2.1:4475877-4475896 | MS.gene057036:CDS | 50.0% |
! | TCATGCTTGTGTTACTGGCG+AGG | + | chr2.1:4475626-4475645 | MS.gene057036:CDS | 50.0% |
!! | TCATTGGAGGGTGCCATTTG+TGG | + | chr2.1:4475925-4475944 | MS.gene057036:CDS | 50.0% |
AAGGAGGTCCAAGAGAGCCA+TGG | + | chr2.1:4475595-4475614 | MS.gene057036:CDS | 55.0% | |
GCATCATGCCATGGCTCTCT+TGG | - | chr2.1:4475606-4475625 | None:intergenic | 55.0% | |
! | CGATCCTTGTGTTGGTGTGC+AGG | + | chr2.1:4475125-4475144 | MS.gene057036:intron | 55.0% |
! | TGCTTGTGTTACTGGCGAGG+CGG | + | chr2.1:4475629-4475648 | MS.gene057036:CDS | 55.0% |
GGCACTCCTTCTGGCCACAT+TGG | - | chr2.1:4476059-4476078 | None:intergenic | 60.0% | |
TGTTACTGGCGAGGCGGCTT+GGG | + | chr2.1:4475635-4475654 | MS.gene057036:CDS | 60.0% | |
!! | GATTCGTTGCACCGGCTCAG+TGG | - | chr2.1:4475020-4475039 | None:intergenic | 60.0% |
!! | GCAGGGGCTAGCCTCAACAA+AGG | + | chr2.1:4475576-4475595 | MS.gene057036:CDS | 60.0% |
!! | GGGGCTAGCCTCAACAAAGG+AGG | + | chr2.1:4475579-4475598 | MS.gene057036:CDS | 60.0% |
! | GTGTTACTGGCGAGGCGGCT+TGG | + | chr2.1:4475634-4475653 | MS.gene057036:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 4473883 | 4476358 | 4473883 | ID=MS.gene057036 |
chr2.1 | mRNA | 4473883 | 4476358 | 4473883 | ID=MS.gene057036.t1;Parent=MS.gene057036 |
chr2.1 | exon | 4473883 | 4473960 | 4473883 | ID=MS.gene057036.t1.exon1;Parent=MS.gene057036.t1 |
chr2.1 | CDS | 4473883 | 4473960 | 4473883 | ID=cds.MS.gene057036.t1;Parent=MS.gene057036.t1 |
chr2.1 | exon | 4474389 | 4474946 | 4474389 | ID=MS.gene057036.t1.exon2;Parent=MS.gene057036.t1 |
chr2.1 | CDS | 4474389 | 4474946 | 4474389 | ID=cds.MS.gene057036.t1;Parent=MS.gene057036.t1 |
chr2.1 | exon | 4475147 | 4476358 | 4475147 | ID=MS.gene057036.t1.exon3;Parent=MS.gene057036.t1 |
chr2.1 | CDS | 4475147 | 4476358 | 4475147 | ID=cds.MS.gene057036.t1;Parent=MS.gene057036.t1 |
Gene Sequence |
Protein sequence |