AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene057037

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene057037.t1 MTR_2g100250 98.677 756 10 0 1 756 1 756 0.0 1575
MS.gene057037.t1 MTR_8g016160 74.005 754 180 5 4 756 7 745 0.0 1171
MS.gene057037.t1 MTR_2g103730 44.636 811 385 19 4 756 5 809 0.0 634
MS.gene057037.t1 MTR_3g107360 43.445 778 381 17 30 756 53 822 0.0 624
MS.gene057037.t1 MTR_4g010650 42.222 810 403 19 5 756 6 808 0.0 612
MS.gene057037.t1 MTR_3g107320 43.117 770 388 17 32 756 62 826 0.0 604
MS.gene057037.t1 MTR_5g011050 41.321 772 382 20 36 749 90 848 0.0 543
MS.gene057037.t1 MTR_5g011060 40.674 772 387 20 36 749 84 842 4.64e-178 531
MS.gene057037.t1 MTR_8g033080 41.276 768 384 21 36 745 281 1039 5.98e-178 538
MS.gene057037.t1 MTR_7g075910 40.933 772 376 25 36 745 351 1104 8.25e-177 536
MS.gene057037.t1 MTR_5g023050 39.152 802 392 24 36 756 86 872 1.26e-176 529
MS.gene057037.t1 MTR_8g088690 40.076 786 391 21 36 756 72 842 2.03e-174 522
MS.gene057037.t1 MTR_3g114840 39.547 794 392 23 36 756 73 851 3.08e-171 514
MS.gene057037.t1 MTR_3g114840 39.853 680 329 18 36 645 73 742 2.72e-144 442
MS.gene057037.t1 MTR_8g033080 39.312 552 275 16 36 534 281 825 9.49e-108 348
MS.gene057037.t1 MTR_1g083620 33.462 260 123 14 427 670 461 686 2.27e-22 103
MS.gene057037.t1 MTR_1g083620 28.440 218 126 5 185 392 127 324 5.01e-16 82.8
MS.gene057037.t1 MTR_1g083620 33.462 260 123 14 427 670 721 946 2.37e-22 103
MS.gene057037.t1 MTR_1g083620 28.440 218 126 5 185 392 387 584 4.50e-16 83.2
MS.gene057037.t1 MTR_2g435560 30.837 227 109 8 425 638 764 955 1.28e-19 94.7
MS.gene057037.t1 MTR_2g435560 25.740 338 166 12 145 425 324 633 9.74e-16 82.4
MS.gene057037.t1 MTR_2g435560 30.837 227 109 8 425 638 629 820 1.37e-19 94.7
MS.gene057037.t1 MTR_2g435560 26.804 291 143 10 145 393 189 451 1.16e-15 82.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene057037.t1 AT1G55180 62.240 768 263 11 3 756 8 762 0.0 1001
MS.gene057037.t1 AT1G55180 62.097 744 255 11 27 756 10 740 0.0 965
MS.gene057037.t1 AT3G15730 43.473 766 382 16 36 756 51 810 0.0 615
MS.gene057037.t1 AT1G52570 43.342 766 383 19 36 756 51 810 0.0 611
MS.gene057037.t1 AT1G52570 43.342 766 383 19 36 756 51 810 0.0 611
MS.gene057037.t1 AT1G52570 43.342 766 383 19 36 756 51 810 0.0 611
MS.gene057037.t1 AT5G25370 42.753 821 396 18 4 756 6 820 0.0 584
MS.gene057037.t1 AT5G25370 42.753 821 396 18 4 756 6 820 0.0 584
MS.gene057037.t1 AT5G25370 42.753 821 396 18 4 756 6 820 0.0 584
MS.gene057037.t1 AT5G25370 45.027 744 359 17 57 756 8 745 0.0 569
MS.gene057037.t1 AT4G11830 41.753 776 370 23 36 745 55 814 1.04e-180 538
MS.gene057037.t1 AT4G11830 41.753 776 370 23 36 745 87 846 1.94e-180 538
MS.gene057037.t1 AT4G11840 41.335 779 370 25 36 745 96 856 4.60e-177 530
MS.gene057037.t1 AT2G42010 40.808 767 385 22 36 745 319 1073 6.95e-177 536
MS.gene057037.t1 AT4G11840 40.927 777 346 24 36 745 96 826 2.36e-175 524
MS.gene057037.t1 AT4G11850 41.268 773 378 23 36 745 89 848 1.65e-174 523
MS.gene057037.t1 AT2G42010 39.520 792 385 22 36 745 319 1098 2.16e-173 528
MS.gene057037.t1 AT4G35790 38.269 797 397 23 36 756 80 857 2.36e-168 507
MS.gene057037.t1 AT4G00240 39.323 768 395 21 36 745 11 765 4.25e-168 503
MS.gene057037.t1 AT4G00240 38.605 803 407 24 16 745 93 882 1.86e-167 506
MS.gene057037.t1 AT4G35790 37.748 808 397 23 36 756 80 868 1.31e-166 503
MS.gene057037.t1 AT4G00240 39.323 768 395 21 36 745 163 917 1.97e-166 504
MS.gene057037.t1 AT4G35790 37.705 610 299 17 36 573 80 680 1.34e-121 380
MS.gene057037.t1 AT4G11830 40.036 562 268 18 36 542 87 634 1.51e-114 360
MS.gene057037.t1 AT4G11830 40.110 546 258 18 36 526 87 618 5.24e-109 346
MS.gene057037.t1 AT3G16785 32.727 220 114 8 425 638 739 930 5.72e-20 95.9
MS.gene057037.t1 AT3G16785 29.577 213 116 7 193 393 388 578 4.28e-15 80.1
MS.gene057037.t1 AT3G16785 32.727 220 114 8 425 638 739 930 5.72e-20 95.9
MS.gene057037.t1 AT3G16785 29.577 213 116 7 193 393 388 578 4.28e-15 80.1
MS.gene057037.t1 AT3G16785 32.727 220 114 8 425 638 739 930 5.88e-20 95.9
MS.gene057037.t1 AT3G16785 29.577 213 116 7 193 393 388 578 4.76e-15 80.1
MS.gene057037.t1 AT3G16785 32.727 220 114 8 425 638 739 930 6.05e-20 95.9
MS.gene057037.t1 AT3G16785 29.577 213 116 7 193 393 388 578 3.68e-15 80.5
MS.gene057037.t1 AT3G16785 32.727 220 114 8 425 638 739 930 7.54e-20 95.5
MS.gene057037.t1 AT3G16785 29.577 213 116 7 193 393 388 578 4.37e-15 80.1
MS.gene057037.t1 AT3G16785 32.727 220 114 8 425 638 739 930 7.54e-20 95.5
MS.gene057037.t1 AT3G16785 29.577 213 116 7 193 393 388 578 4.37e-15 80.1
MS.gene057037.t1 AT3G05630 29.804 255 143 9 425 670 694 921 3.63e-19 93.2
MS.gene057037.t1 AT3G05630 27.477 222 123 7 185 392 375 572 6.18e-14 76.3

Find 163 sgRNAs with CRISPR-Local

Find 245 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACACCTTTGTTCTTGATAAA+TGG 0.146812 2.3:-3402116 None:intergenic
TCTTGAACTGGTTCACTTTC+AGG 0.161180 2.3:-3402923 None:intergenic
TAAAATTAAGGTTTATATTA+TGG 0.167823 2.3:+3401506 MS.gene057037:CDS
TGCACACATTCTAAACTTTC+TGG 0.177165 2.3:-3403908 None:intergenic
GTGAATGTCACCTTTGCTTA+TGG 0.212678 2.3:-3403825 None:intergenic
TTTCAGTGTTTATTTGTAAA+TGG 0.237490 2.3:+3401229 MS.gene057037:intron
ATGGTTCAAGCCAGCAAATT+TGG 0.246559 2.3:+3401525 MS.gene057037:CDS
TTCCTCAACAAGCACTTCTA+TGG 0.258809 2.3:+3402595 MS.gene057037:CDS
TCACTTTCAGGCACTCCTTC+TGG 0.260249 2.3:-3402911 None:intergenic
AAAACAACATGTACCATATT+AGG 0.268038 2.3:+3401388 MS.gene057037:CDS
GATGCTCATGCTTGTGTTAC+TGG 0.268529 2.3:+3402467 MS.gene057037:CDS
ACATCCTCCCATAACTTTCT+AGG 0.271863 2.3:-3401697 None:intergenic
GGCACCCTCCAATGAAATAT+TGG 0.278690 2.3:-3402763 None:intergenic
CAAATCAAGAACTAAAATTA+AGG 0.279298 2.3:+3401494 MS.gene057037:CDS
CTACAGCAGTGAAGAAATTA+TGG 0.290427 2.3:+3403967 MS.gene057037:CDS
CAACTTGGTTCCAAATTTGC+TGG 0.292857 2.3:-3401535 None:intergenic
TTTGCCCGTCCATCGATCTT+TGG 0.295154 2.3:-3403745 None:intergenic
TCAACTGTTGTGCCTTGATT+TGG 0.299930 2.3:-3401417 None:intergenic
TTGCTTCGACGTAAGCTTCA+TGG 0.302186 2.3:-3402706 None:intergenic
CCCATGATAGTAACACAAAA+TGG 0.306781 2.3:+3404019 MS.gene057037:CDS
TTCCCTCTACTAATGGAAAA+TGG 0.318183 2.3:+3401466 MS.gene057037:CDS
TGGCTGTAAGGGTTATGATT+TGG 0.320459 2.3:+3402075 MS.gene057037:CDS
ATATGTACCAGAACCATCTT+AGG 0.324723 2.3:-3401778 None:intergenic
GGCTGTAAGGGTTATGATTT+GGG 0.332421 2.3:+3402076 MS.gene057037:CDS
GTGTTACTGGCGAGGCGGCT+TGG 0.335844 2.3:+3402480 MS.gene057037:CDS
TGGATCCTTCCCTCTACTAA+TGG 0.347290 2.3:+3401459 MS.gene057037:CDS
GCACTCCAGTATTGAGTATC+AGG 0.351096 2.3:-3403115 None:intergenic
TGTTACTGGCGAGGCGGCTT+GGG 0.360313 2.3:+3402481 MS.gene057037:CDS
TCTCTGTCATTGACAGAGTT+AGG 0.362506 2.3:-3402278 None:intergenic
TTTCAATCCTAAGATGGTTC+TGG 0.364284 2.3:+3401771 MS.gene057037:CDS
ACATGACAATTAGACCTTTG+TGG 0.370512 2.3:-3401610 None:intergenic
AGCTTTGGTATCCACGGTTA+TGG 0.372953 2.3:-3402255 None:intergenic
ATTGACAGAGTTAGGAGCTT+TGG 0.373133 2.3:-3402270 None:intergenic
ATTGAAAACCAATATTTCAT+TGG 0.373278 2.3:+3402755 MS.gene057037:CDS
TTCAAACAATGAATGTTTCT+CGG 0.374381 2.3:-3402351 None:intergenic
GCACTTCTATGGAAAGGAAT+TGG 0.375461 2.3:+3402606 MS.gene057037:CDS
AAGCTTACGTCGAAGCAATA+AGG 0.376408 2.3:+3402711 MS.gene057037:CDS
GAAGTGCTTGTTGAGGAAAT+AGG 0.378292 2.3:-3402590 None:intergenic
GATGACCTATATATACTAAT+AGG 0.379557 2.3:+3403707 MS.gene057037:CDS
CACAAGAAAGTGAACGTGTT+TGG 0.380930 2.3:+3401305 MS.gene057037:CDS
GCATCATGCCATGGCTCTCT+TGG 0.387236 2.3:-3402449 None:intergenic
TGGAGTTCCTAGAAAGTTAT+GGG 0.388103 2.3:+3401690 MS.gene057037:CDS
CTCTTCCTGATACTCAATAC+TGG 0.390043 2.3:+3403110 MS.gene057037:CDS
TGAATGTCACCTTTGCTTAT+GGG 0.394279 2.3:-3403824 None:intergenic
CAACTCCATCTTGATGAAAC+TGG 0.398815 2.3:-3403796 None:intergenic
TGATGATGAGCAAAGATTGT+AGG 0.400183 2.3:-3402227 None:intergenic
GGGAATTTGTCATGTAATCT+AGG 0.401511 2.3:-3402206 None:intergenic
GTGGAGTTCCTAGAAAGTTA+TGG 0.405314 2.3:+3401689 MS.gene057037:CDS
GGATGTTTATAAAGCTATTG+AGG 0.411752 2.3:+3401714 MS.gene057037:CDS
CAGAAGAAGGAGTGGCTGTA+AGG 0.414409 2.3:+3402063 MS.gene057037:CDS
TTCTACCAGACAAATATTGC+AGG 0.419367 2.3:+3402404 MS.gene057037:CDS
AAGGGAAATGAAGGAGAGTA+GGG 0.420361 2.3:-3400780 None:intergenic
CTTAGTAGCTTTGTCCAACT+TGG 0.425327 2.3:-3401550 None:intergenic
GAAGGGAAATGAAGGAGAGT+AGG 0.425566 2.3:-3400781 None:intergenic
GCATGTGGGATTTCTGTTTG+AGG 0.436003 2.3:-3402002 None:intergenic
GTTCACTCCAAGCTCGTGAT+AGG 0.437935 2.3:+3403166 MS.gene057037:CDS
TCATTGGAGGGTGCCATTTG+TGG 0.442041 2.3:+3402771 MS.gene057037:CDS
GCAATGGATAAGCTCATTCA+TGG 0.442063 2.3:+3400726 None:intergenic
GATGATGAGCAAAGATTGTA+GGG 0.448753 2.3:-3402226 None:intergenic
ATCATAGAAAGTGGTGAGCC+AGG 0.450323 2.3:+3403004 MS.gene057037:CDS
CACACTGAATCTGAAATGTT+TGG 0.451106 2.3:-3401330 None:intergenic
CCTTGCAAATAGGGAAAAGA+AGG 0.453199 2.3:+3403057 MS.gene057037:CDS
ATCTTGATTGTCACATAAGC+AGG 0.455101 2.3:-3401256 None:intergenic
CTGATCCTATTAGTATATAT+AGG 0.457591 2.3:-3403712 None:intergenic
TCTTATCTTTCTGCCACAAA+TGG 0.460881 2.3:-3402784 None:intergenic
TTCATTAGAGCTCACATTGA+AGG 0.462875 2.3:-3400799 None:intergenic
AAATATTTAGTATATATTGC+AGG 0.463860 2.3:+3401742 MS.gene057037:CDS
CTGGTCTTTCAATCCTAAGA+TGG 0.467682 2.3:+3401765 MS.gene057037:CDS
TCAAAAGGAGGTTGGAAAGT+AGG 0.467738 2.3:-3401661 None:intergenic
CAATGCAGTATATCTTGAAC+TGG 0.467818 2.3:-3402935 None:intergenic
CTATCATGGGGTAAGTTACT+AGG 0.473210 2.3:-3404006 None:intergenic
GTGCAGAGAATGTGCTCAAT+AGG 0.473934 2.3:+3403926 MS.gene057037:CDS
CACAATTATCAAAAGGAGGT+TGG 0.476823 2.3:-3401669 None:intergenic
CTAAGTAGTGAAGAGTTTCA+AGG 0.476881 2.3:+3401568 MS.gene057037:CDS
ACAAGATTAAAGCAAGAGAA+AGG 0.477212 2.3:+3402858 MS.gene057037:CDS
CTGTTAGCTTTCTAAACAGT+TGG 0.477520 2.3:-3402670 None:intergenic
TATTTGTCTGGTAGAAATCA+TGG 0.479616 2.3:-3402397 None:intergenic
AAGGAAGACAGTTTGATCAA+TGG 0.480801 2.3:+3401439 MS.gene057037:CDS
TCCTATTGAGATTGCACTCA+AGG 0.481371 2.3:+3402829 MS.gene057037:CDS
AACTTTATTTCTCTAGCATG+TGG 0.485581 2.3:-3402017 None:intergenic
TAGCCCCTGCAATATTTGTC+TGG 0.486823 2.3:-3402409 None:intergenic
ATTAGGAAAATTCCAAATCA+AGG 0.487446 2.3:+3401405 MS.gene057037:CDS
ACAATGATGTATAAGTTGAT+TGG 0.489344 2.3:+3402974 MS.gene057037:CDS
GAAAACCAATATTTCATTGG+AGG 0.491937 2.3:+3402758 MS.gene057037:CDS
ACCTTGAGTGCAATCTCAAT+AGG 0.493010 2.3:-3402830 None:intergenic
GTGAAGAGTTTCAAGGGCTG+AGG 0.494050 2.3:+3401575 MS.gene057037:CDS
AATCAAGGCACAACAGTTGA+AGG 0.494105 2.3:+3401420 MS.gene057037:CDS
AAGTAATCTCTCGGATGTCC+TGG 0.496223 2.3:-3403022 None:intergenic
AAAACCAATATTTCATTGGA+GGG 0.496243 2.3:+3402759 MS.gene057037:CDS
CTCTTGGACCTCCTTTGTTG+AGG 0.496416 2.3:-3402433 None:intergenic
GGAACTCCACAATTATCAAA+AGG 0.498863 2.3:-3401676 None:intergenic
GGCACTCCTTCTGGCCACAT+TGG 0.503394 2.3:-3402902 None:intergenic
AATCATACCTATCACGAGCT+TGG 0.505438 2.3:-3403173 None:intergenic
CTCACATTGAAGGGAAATGA+AGG 0.505783 2.3:-3400789 None:intergenic
AAGCAATAAGGCGTGCCGAT+AGG 0.510171 2.3:+3402723 MS.gene057037:CDS
AAGATCGATGGACGGGCAAA+GGG 0.511045 2.3:+3403748 MS.gene057037:CDS
GGCTACCAGTTTCATCAAGA+TGG 0.515157 2.3:+3403791 MS.gene057037:CDS
CAAGATAGACAATAAGAAAG+TGG 0.515400 2.3:+3401273 MS.gene057037:CDS
AAGAAATTCAAGTAATCTCT+CGG 0.518087 2.3:-3403031 None:intergenic
CAGTATTGAGTATCAGGAAG+AGG 0.519004 2.3:-3403109 None:intergenic
AAAGATCGATGGACGGGCAA+AGG 0.521722 2.3:+3403747 MS.gene057037:CDS
CATGCTAGAGAAATAAAGTT+GGG 0.529280 2.3:+3402020 MS.gene057037:CDS
GATGTTTATAAAGCTATTGA+GGG 0.530650 2.3:+3401715 MS.gene057037:CDS
AGAAGAAGGAGTGGCTGTAA+GGG 0.531289 2.3:+3402064 MS.gene057037:CDS
ACTTTATTTCTCTAGCATGT+GGG 0.537734 2.3:-3402016 None:intergenic
ATTGGAAAGTGCAAGTATAC+CGG 0.542544 2.3:+3402624 MS.gene057037:CDS
TCATTAGAGCTCACATTGAA+GGG 0.542682 2.3:-3400798 None:intergenic
TAGGGAAAAGAAGGAAAATG+AGG 0.551505 2.3:+3403066 MS.gene057037:CDS
CAGCAAATTTGGAACCAAGT+TGG 0.555393 2.3:+3401536 MS.gene057037:CDS
ATTGTTTGAAACACTTGCTG+AGG 0.558143 2.3:+3402364 MS.gene057037:CDS
TGAACCAAAGATCGATGGAC+GGG 0.560632 2.3:+3403741 MS.gene057037:CDS
GAGGTTGGAAAGTAGGTGAA+TGG 0.561082 2.3:-3401654 None:intergenic
CAGTGAAGAAATTATGGACA+TGG 0.568985 2.3:+3403973 MS.gene057037:CDS
TCTGTGGAAGATCTAACTAA+TGG 0.569159 2.3:+3404043 MS.gene057037:CDS
TCAGGAAGAGGAGAATGTGG+TGG 0.569774 2.3:-3403097 None:intergenic
TTTCCATTTATCAAGAACAA+AGG 0.570612 2.3:+3402113 MS.gene057037:CDS
ATTTAGTATATATTGCAGGC+TGG 0.570668 2.3:+3401746 MS.gene057037:CDS
GATACAAAAGCTCTAGTGAA+AGG 0.570925 2.3:+3404082 MS.gene057037:CDS
TTCAATGTACACAAACCTAT+CGG 0.572544 2.3:-3402738 None:intergenic
GCTCATTCATGGAACAATTG+AGG 0.574540 2.3:+3400737 MS.gene057037:CDS
ACATGCTAGAGAAATAAAGT+TGG 0.574919 2.3:+3402019 MS.gene057037:CDS
CAACAAGCACTTCTATGGAA+AGG 0.578353 2.3:+3402600 MS.gene057037:CDS
GTCATACCAATGTGGCCAGA+AGG 0.580529 2.3:+3402896 MS.gene057037:CDS
TAAGTAGTGAAGAGTTTCAA+GGG 0.580907 2.3:+3401569 MS.gene057037:CDS
GGAGAAGCAATCATAGAAAG+TGG 0.580963 2.3:+3402995 MS.gene057037:CDS
GTTAGGAGCTTTGGTATCCA+CGG 0.582477 2.3:-3402261 None:intergenic
TTCCATAGAAGTGCTTGTTG+AGG 0.590769 2.3:-3402597 None:intergenic
GCTCAATAGGAGATAAAATG+TGG 0.592126 2.3:+3403939 MS.gene057037:CDS
GGTGGTTTAGATTTGTGCGA+CGG 0.597565 2.3:+3402317 MS.gene057037:CDS
TCTACCAGACAAATATTGCA+GGG 0.601616 2.3:+3402405 MS.gene057037:CDS
GTATCAGGAAGAGGAGAATG+TGG 0.604673 2.3:-3403100 None:intergenic
TGAAGAGTTTCAAGGGCTGA+GGG 0.609783 2.3:+3401576 MS.gene057037:CDS
CTGAGACATGATCAATCGAC+CGG 0.610594 2.3:-3402643 None:intergenic
AAAGAAAGCAGAAGAAGGAG+TGG 0.610818 2.3:+3402055 MS.gene057037:CDS
GGCTAAGTGGTAATGACAGA+GGG 0.611158 2.3:-3404124 None:intergenic
AGTAACACAAAATGGATCTG+TGG 0.620720 2.3:+3404027 MS.gene057037:CDS
ACACAAAAGTAGTATGCAGA+AGG 0.623210 2.3:+3402180 MS.gene057037:CDS
GTGAACCAAAGATCGATGGA+CGG 0.630105 2.3:+3403740 MS.gene057037:CDS
CAAGCATGAGCATCATGCCA+TGG 0.632322 2.3:-3402458 None:intergenic
CAGTTCAAGATATACTGCAT+TGG 0.636717 2.3:+3402936 MS.gene057037:CDS
GTTGATCATCCCATAAGCAA+AGG 0.638827 2.3:+3403815 MS.gene057037:CDS
TGAAGAAATTATGGACATGG+AGG 0.639170 2.3:+3403976 MS.gene057037:CDS
CTACCAGACAAATATTGCAG+GGG 0.640062 2.3:+3402406 MS.gene057037:CDS
AGGGACACAGAAATTGCGAT+CGG 0.641781 2.3:+3403767 MS.gene057037:CDS
AAATGTGAACCAAAGATCGA+TGG 0.642298 2.3:+3403736 MS.gene057037:CDS
ACTCCACAATTATCAAAAGG+AGG 0.646785 2.3:-3401673 None:intergenic
AAGGAGGTCCAAGAGAGCCA+TGG 0.649131 2.3:+3402441 MS.gene057037:CDS
GAAGAAATTATGGACATGGA+GGG 0.652171 2.3:+3403977 MS.gene057037:CDS
TCATGCTTGTGTTACTGGCG+AGG 0.655164 2.3:+3402472 MS.gene057037:CDS
GACACAGAAATTGCGATCGG+AGG 0.656668 2.3:+3403770 MS.gene057037:CDS
GGGGCTAGCCTCAACAAAGG+AGG 0.660504 2.3:+3402425 MS.gene057037:CDS
TGCTTGTGTTACTGGCGAGG+CGG 0.660654 2.3:+3402475 MS.gene057037:CDS
GCAGGGGCTAGCCTCAACAA+AGG 0.667195 2.3:+3402422 MS.gene057037:CDS
TGGCTAAGTGGTAATGACAG+AGG 0.667320 2.3:-3404125 None:intergenic
TGGCAGAAAGATAAGAACAG+TGG 0.670376 2.3:+3402791 MS.gene057037:CDS
TGTGATGAACACACATGACG+AGG 0.674406 2.3:+3402136 MS.gene057037:CDS
TATTGAGATTGCACTCAAGG+TGG 0.678261 2.3:+3402832 MS.gene057037:CDS
AGTTCCTAGAAAGTTATGGG+AGG 0.683421 2.3:+3401693 MS.gene057037:CDS
GGAAGATCTAACTAATGGTG+AGG 0.696498 2.3:+3404048 MS.gene057037:CDS
TGTATATAGTCATACCAATG+TGG 0.699010 2.3:+3402888 MS.gene057037:CDS
GGGATGCTACATTTCCACAA+AGG 0.704533 2.3:+3401596 MS.gene057037:CDS
ACGAATACAGAATGTCAATG+TGG 0.720257 2.3:+3403846 MS.gene057037:CDS
TCAATGTGGTATGAACACAC+TGG 0.796931 2.3:+3403860 MS.gene057037:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAAAAAAATAAAGAGA+AGG - chr2.3:3400875-3400894 None:intergenic 10.0%
!! TAAAATTAAGGTTTATATTA+TGG + chr2.3:3401506-3401525 MS.gene057037:CDS 10.0%
!!! TATATTGATATACATTTTTT+TGG + chr2.3:3401827-3401846 MS.gene057037:intron 10.0%
!! AAATATTTAGTATATATTGC+AGG + chr2.3:3401742-3401761 MS.gene057037:CDS 15.0%
!! ATTAAACCAACATATATTTA+TGG - chr2.3:3403202-3403221 None:intergenic 15.0%
!! ATTAAACCATAAATATATGT+TGG + chr2.3:3403193-3403212 MS.gene057037:intron 15.0%
!!! CAAATTTTGTCAATATTATA+GGG - chr2.3:3400850-3400869 None:intergenic 15.0%
!!! TCAAATTTTGTCAATATTAT+AGG - chr2.3:3400851-3400870 None:intergenic 15.0%
!! AGTTGTTGAACATATATATA+TGG - chr2.3:3403511-3403530 None:intergenic 20.0%
!! ATTGAAAACCAATATTTCAT+TGG + chr2.3:3402755-3402774 MS.gene057037:CDS 20.0%
!! CAAATCAAGAACTAAAATTA+AGG + chr2.3:3401494-3401513 MS.gene057037:CDS 20.0%
!! CAAGTGAATTTATAATACAT+AGG + chr2.3:3403341-3403360 MS.gene057037:intron 20.0%
!! CTATGTATTATAAATTCACT+TGG - chr2.3:3403343-3403362 None:intergenic 20.0%
!! TTCCAATACAAAAACTTAAT+AGG + chr2.3:3403572-3403591 MS.gene057037:intron 20.0%
!! TTTCAGTGTTTATTTGTAAA+TGG + chr2.3:3401229-3401248 MS.gene057037:intron 20.0%
!!! AATAATTGGATTTTAAAAGG+AGG + chr2.3:3403435-3403454 MS.gene057037:intron 20.0%
!!! ACAATTTTTTTTTATTGACG+TGG - chr2.3:3403375-3403394 None:intergenic 20.0%
!!! ATAATTGGATTTTAAAAGGA+GGG + chr2.3:3403436-3403455 MS.gene057037:intron 20.0%
!!! ATTAAGTTTTTGTATTGGAA+AGG - chr2.3:3403572-3403591 None:intergenic 20.0%
!!! CCAAATAATTGGATTTTAAA+AGG + chr2.3:3403432-3403451 MS.gene057037:intron 20.0%
!!! CCTTTTAAAATCCAATTATT+TGG - chr2.3:3403435-3403454 None:intergenic 20.0%
!!! CTTAATTTTAGTTCTTGATT+TGG - chr2.3:3401496-3401515 None:intergenic 20.0%
!!! TGATATACATTTTTTTGGTT+AGG + chr2.3:3401832-3401851 MS.gene057037:intron 20.0%
! AAAACAACATGTACCATATT+AGG + chr2.3:3401388-3401407 MS.gene057037:CDS 25.0%
! AAAACCAATATTTCATTGGA+GGG + chr2.3:3402759-3402778 MS.gene057037:CDS 25.0%
! AAGAAATTCAAGTAATCTCT+CGG - chr2.3:3403034-3403053 None:intergenic 25.0%
! ACAGAAAAATAGAAGATTCA+TGG + chr2.3:3403138-3403157 MS.gene057037:CDS 25.0%
! ATATATATATGGCTTGATCA+TGG - chr2.3:3403500-3403519 None:intergenic 25.0%
! ATTAGGAAAATTCCAAATCA+AGG + chr2.3:3401405-3401424 MS.gene057037:CDS 25.0%
! ATTGAAGAAATAATAACAGG+AGG - chr2.3:3401066-3401085 None:intergenic 25.0%
! CACATTATAGAATATGTAGT+TGG - chr2.3:3401181-3401200 None:intergenic 25.0%
! CTGATCCTATTAGTATATAT+AGG - chr2.3:3403715-3403734 None:intergenic 25.0%
! GACATTGAAGAAATAATAAC+AGG - chr2.3:3401069-3401088 None:intergenic 25.0%
! GATGACCTATATATACTAAT+AGG + chr2.3:3403707-3403726 MS.gene057037:CDS 25.0%
! GATGTTTATAAAGCTATTGA+GGG + chr2.3:3401715-3401734 MS.gene057037:CDS 25.0%
! TTCAAACAATGAATGTTTCT+CGG - chr2.3:3402354-3402373 None:intergenic 25.0%
! TTTCCATTTATCAAGAACAA+AGG + chr2.3:3402113-3402132 MS.gene057037:CDS 25.0%
!! AATAGGAATGAGATTTTCTA+AGG - chr2.3:3402576-3402595 None:intergenic 25.0%
!! AGAGAAATTATGAGCTTTTT+GGG + chr2.3:3402296-3402315 MS.gene057037:CDS 25.0%
!! CTCCTATTAAGTTTTTGTAT+TGG - chr2.3:3403577-3403596 None:intergenic 25.0%
!! TAGCTAATTTTGAACAAAGA+TGG + chr2.3:3402510-3402529 MS.gene057037:CDS 25.0%
!!! ACAATGATGTATAAGTTGAT+TGG + chr2.3:3402974-3402993 MS.gene057037:CDS 25.0%
!!! GATTTGGAATTTTCCTAATA+TGG - chr2.3:3401404-3401423 None:intergenic 25.0%
ACAAGATTAAAGCAAGAGAA+AGG + chr2.3:3402858-3402877 MS.gene057037:CDS 30.0%
ACACCTTTGTTCTTGATAAA+TGG - chr2.3:3402119-3402138 None:intergenic 30.0%
ACATGCTAGAGAAATAAAGT+TGG + chr2.3:3402019-3402038 MS.gene057037:CDS 30.0%
AGTTAAACCAAGATCATGAA+TGG - chr2.3:3403653-3403672 None:intergenic 30.0%
ATTTAGTATATATTGCAGGC+TGG + chr2.3:3401746-3401765 MS.gene057037:CDS 30.0%
CAAGATAGACAATAAGAAAG+TGG + chr2.3:3401273-3401292 MS.gene057037:CDS 30.0%
CATGCTAGAGAAATAAAGTT+GGG + chr2.3:3402020-3402039 MS.gene057037:CDS 30.0%
GAAAACCAATATTTCATTGG+AGG + chr2.3:3402758-3402777 MS.gene057037:CDS 30.0%
GGATGTTTATAAAGCTATTG+AGG + chr2.3:3401714-3401733 MS.gene057037:CDS 30.0%
TAAGTAGTGAAGAGTTTCAA+GGG + chr2.3:3401569-3401588 MS.gene057037:CDS 30.0%
TAGATCCAAAATACGAGTAA+GGG + chr2.3:3403408-3403427 MS.gene057037:intron 30.0%
TATTTGTCTGGTAGAAATCA+TGG - chr2.3:3402400-3402419 None:intergenic 30.0%
TGTATATAGTCATACCAATG+TGG + chr2.3:3402888-3402907 MS.gene057037:CDS 30.0%
TGTTACAAGTATGACTATAG+AGG - chr2.3:3400900-3400919 None:intergenic 30.0%
TTAGATCCAAAATACGAGTA+AGG + chr2.3:3403407-3403426 MS.gene057037:intron 30.0%
TTCAATGTACACAAACCTAT+CGG - chr2.3:3402741-3402760 None:intergenic 30.0%
TTGAAAAAGAAAGCAGAAGA+AGG + chr2.3:3402050-3402069 MS.gene057037:CDS 30.0%
! AACTTTATTTCTCTAGCATG+TGG - chr2.3:3402020-3402039 None:intergenic 30.0%
! ACTTTATTTCTCTAGCATGT+GGG - chr2.3:3402019-3402038 None:intergenic 30.0%
! AGACTTTTGTACACAAAAGT+GGG + chr2.3:3403265-3403284 MS.gene057037:intron 30.0%
! ATTTCTTTTGCCTTGCAAAT+AGG + chr2.3:3403047-3403066 MS.gene057037:CDS 30.0%
! CAGAGAAATTATGAGCTTTT+TGG + chr2.3:3402295-3402314 MS.gene057037:CDS 30.0%
! TACCATTTTCCATTAGTAGA+GGG - chr2.3:3401471-3401490 None:intergenic 30.0%
! TAGACTTTTGTACACAAAAG+TGG + chr2.3:3403264-3403283 MS.gene057037:intron 30.0%
! TTACCATTTTCCATTAGTAG+AGG - chr2.3:3401472-3401491 None:intergenic 30.0%
! TTTCTTTTGCCTTGCAAATA+GGG + chr2.3:3403048-3403067 MS.gene057037:CDS 30.0%
!! CATTTTGTGTTACTATCATG+GGG - chr2.3:3404021-3404040 None:intergenic 30.0%
!! CCATTTTGTGTTACTATCAT+GGG - chr2.3:3404022-3404041 None:intergenic 30.0%
!! TCCATTTTGTGTTACTATCA+TGG - chr2.3:3404023-3404042 None:intergenic 30.0%
!!! ACATGTTGTTTTCAGTGTAA+TGG - chr2.3:3401380-3401399 None:intergenic 30.0%
!!! GTTTTTTGTCCAAATAAGAC+TGG + chr2.3:3400932-3400951 MS.gene057037:intron 30.0%
!!! TGTTGGTTTAATTGCAGTTT+TGG + chr2.3:3403210-3403229 MS.gene057037:intron 30.0%
AAATGTGAACCAAAGATCGA+TGG + chr2.3:3403736-3403755 MS.gene057037:CDS 35.0%
AACGAATCTTAGTATCAGCT+CGG + chr2.3:3401878-3401897 MS.gene057037:intron 35.0%
AAGGAAGACAGTTTGATCAA+TGG + chr2.3:3401439-3401458 MS.gene057037:CDS 35.0%
AAGTCTACAAATTTCGTGAG+CGG - chr2.3:3403251-3403270 None:intergenic 35.0%
ACACAAAAGTAGTATGCAGA+AGG + chr2.3:3402180-3402199 MS.gene057037:CDS 35.0%
ACATGACAATTAGACCTTTG+TGG - chr2.3:3401613-3401632 None:intergenic 35.0%
ACGAATACAGAATGTCAATG+TGG + chr2.3:3403846-3403865 MS.gene057037:CDS 35.0%
ACTCCACAATTATCAAAAGG+AGG - chr2.3:3401676-3401695 None:intergenic 35.0%
AGTAACACAAAATGGATCTG+TGG + chr2.3:3404027-3404046 MS.gene057037:CDS 35.0%
AGTATATATAGGTCATCCAC+TGG - chr2.3:3403704-3403723 None:intergenic 35.0%
ATATGTACCAGAACCATCTT+AGG - chr2.3:3401781-3401800 None:intergenic 35.0%
ATCTTGATTGTCACATAAGC+AGG - chr2.3:3401259-3401278 None:intergenic 35.0%
CAATGCAGTATATCTTGAAC+TGG - chr2.3:3402938-3402957 None:intergenic 35.0%
CACAATTATCAAAAGGAGGT+TGG - chr2.3:3401672-3401691 None:intergenic 35.0%
CAGTGAAGAAATTATGGACA+TGG + chr2.3:3403973-3403992 MS.gene057037:CDS 35.0%
CAGTTCAAGATATACTGCAT+TGG + chr2.3:3402936-3402955 MS.gene057037:CDS 35.0%
CCCATGATAGTAACACAAAA+TGG + chr2.3:3404019-3404038 MS.gene057037:CDS 35.0%
CTAAGTAGTGAAGAGTTTCA+AGG + chr2.3:3401568-3401587 MS.gene057037:CDS 35.0%
CTACAGCAGTGAAGAAATTA+TGG + chr2.3:3403967-3403986 MS.gene057037:CDS 35.0%
GAAAACACCATTCATGATCT+TGG + chr2.3:3403643-3403662 MS.gene057037:intron 35.0%
GAAGAAATTATGGACATGGA+GGG + chr2.3:3403977-3403996 MS.gene057037:CDS 35.0%
GATGATGAGCAAAGATTGTA+GGG - chr2.3:3402229-3402248 None:intergenic 35.0%
GCTCAATAGGAGATAAAATG+TGG + chr2.3:3403939-3403958 MS.gene057037:CDS 35.0%
GGAACTCCACAATTATCAAA+AGG - chr2.3:3401679-3401698 None:intergenic 35.0%
GGGAATTTGTCATGTAATCT+AGG - chr2.3:3402209-3402228 None:intergenic 35.0%
TAGGGAAAAGAAGGAAAATG+AGG + chr2.3:3403066-3403085 MS.gene057037:CDS 35.0%
TCATCAAAAAACCATAACCG+TGG + chr2.3:3402244-3402263 MS.gene057037:CDS 35.0%
TCATTAGAGCTCACATTGAA+GGG - chr2.3:3400801-3400820 None:intergenic 35.0%
TCTACCAGACAAATATTGCA+GGG + chr2.3:3402405-3402424 MS.gene057037:CDS 35.0%
TCTGTGGAAGATCTAACTAA+TGG + chr2.3:3404043-3404062 MS.gene057037:CDS 35.0%
TCTTATCTTTCTGCCACAAA+TGG - chr2.3:3402787-3402806 None:intergenic 35.0%
TGAAGAAATTATGGACATGG+AGG + chr2.3:3403976-3403995 MS.gene057037:CDS 35.0%
TGAATGTCACCTTTGCTTAT+GGG - chr2.3:3403827-3403846 None:intergenic 35.0%
TGCACACATTCTAAACTTTC+TGG - chr2.3:3403911-3403930 None:intergenic 35.0%
TGGAGTTCCTAGAAAGTTAT+GGG + chr2.3:3401690-3401709 MS.gene057037:CDS 35.0%
TTCATTAGAGCTCACATTGA+AGG - chr2.3:3400802-3400821 None:intergenic 35.0%
TTCCCTCTACTAATGGAAAA+TGG + chr2.3:3401466-3401485 MS.gene057037:CDS 35.0%
TTCTACCAGACAAATATTGC+AGG + chr2.3:3402404-3402423 MS.gene057037:CDS 35.0%
TTGTCCAAATAAGACTGGTA+GGG + chr2.3:3400937-3400956 MS.gene057037:intron 35.0%
TTTCAATCCTAAGATGGTTC+TGG + chr2.3:3401771-3401790 MS.gene057037:CDS 35.0%
TTTGTCCAAATAAGACTGGT+AGG + chr2.3:3400936-3400955 MS.gene057037:intron 35.0%
! AGTTTTCAGAGTTCGAACTT+TGG + chr2.3:3401039-3401058 MS.gene057037:intron 35.0%
! ATATGGCTTGATCATGGTTT+TGG - chr2.3:3403494-3403513 None:intergenic 35.0%
! ATTGGAAAGTGCAAGTATAC+CGG + chr2.3:3402624-3402643 MS.gene057037:CDS 35.0%
! ATTGTTTGAAACACTTGCTG+AGG + chr2.3:3402364-3402383 MS.gene057037:CDS 35.0%
! ATTTTCCATTAGTAGAGGGA+AGG - chr2.3:3401467-3401486 None:intergenic 35.0%
! CACACTGAATCTGAAATGTT+TGG - chr2.3:3401333-3401352 None:intergenic 35.0%
! GATACAAAAGCTCTAGTGAA+AGG + chr2.3:3404082-3404101 MS.gene057037:CDS 35.0%
! TGATGATGAGCAAAGATTGT+AGG - chr2.3:3402230-3402249 None:intergenic 35.0%
! TGTTTTCAGTGTAATGGTGA+TGG - chr2.3:3401374-3401393 None:intergenic 35.0%
! TTCACTAGAGCTTTTGTATC+AGG - chr2.3:3404082-3404101 None:intergenic 35.0%
!! CAACCTCCTTTTGATAATTG+TGG + chr2.3:3401670-3401689 MS.gene057037:CDS 35.0%
!! CTGTTAGCTTTCTAAACAGT+TGG - chr2.3:3402673-3402692 None:intergenic 35.0%
!! GAAATTATGAGCTTTTTGGG+TGG + chr2.3:3402299-3402318 MS.gene057037:CDS 35.0%
!!! AGATTTTCTAAGGTGTTTGC+AGG - chr2.3:3402566-3402585 None:intergenic 35.0%
!!! GATTTTCTAAGGTGTTTGCA+GGG - chr2.3:3402565-3402584 None:intergenic 35.0%
AAAGAAAGCAGAAGAAGGAG+TGG + chr2.3:3402055-3402074 MS.gene057037:CDS 40.0%
AAGCTTACGTCGAAGCAATA+AGG + chr2.3:3402711-3402730 MS.gene057037:CDS 40.0%
AAGGGAAATGAAGGAGAGTA+GGG - chr2.3:3400783-3400802 None:intergenic 40.0%
AATCAAGGCACAACAGTTGA+AGG + chr2.3:3401420-3401439 MS.gene057037:CDS 40.0%
AATCATACCTATCACGAGCT+TGG - chr2.3:3403176-3403195 None:intergenic 40.0%
ACATCCTCCCATAACTTTCT+AGG - chr2.3:3401700-3401719 None:intergenic 40.0%
ACCTTGAGTGCAATCTCAAT+AGG - chr2.3:3402833-3402852 None:intergenic 40.0%
AGTCTACAAATTTCGTGAGC+GGG - chr2.3:3403250-3403269 None:intergenic 40.0%
AGTTCCTAGAAAGTTATGGG+AGG + chr2.3:3401693-3401712 MS.gene057037:CDS 40.0%
ATCTTAGTATCAGCTCGGTT+TGG + chr2.3:3401883-3401902 MS.gene057037:intron 40.0%
ATGGTTCAAGCCAGCAAATT+TGG + chr2.3:3401525-3401544 MS.gene057037:CDS 40.0%
ATTGACAGAGTTAGGAGCTT+TGG - chr2.3:3402273-3402292 None:intergenic 40.0%
CAACAAGCACTTCTATGGAA+AGG + chr2.3:3402600-3402619 MS.gene057037:CDS 40.0%
CAACTCCATCTTGATGAAAC+TGG - chr2.3:3403799-3403818 None:intergenic 40.0%
CAACTTGGTTCCAAATTTGC+TGG - chr2.3:3401538-3401557 None:intergenic 40.0%
CACAAGAAAGTGAACGTGTT+TGG + chr2.3:3401305-3401324 MS.gene057037:CDS 40.0%
CCAACACAAGGATCGTATTA+AGG - chr2.3:3401966-3401985 None:intergenic 40.0%
CCTTAATACGATCCTTGTGT+TGG + chr2.3:3401963-3401982 MS.gene057037:intron 40.0%
CCTTGCAAATAGGGAAAAGA+AGG + chr2.3:3403057-3403076 MS.gene057037:CDS 40.0%
CGAGTAAGGGACCAAATAAT+TGG + chr2.3:3403421-3403440 MS.gene057037:intron 40.0%
CTACCAGACAAATATTGCAG+GGG + chr2.3:3402406-3402425 MS.gene057037:CDS 40.0%
CTATCATGGGGTAAGTTACT+AGG - chr2.3:3404009-3404028 None:intergenic 40.0%
CTCACATTGAAGGGAAATGA+AGG - chr2.3:3400792-3400811 None:intergenic 40.0%
CTCTTCCTGATACTCAATAC+TGG + chr2.3:3403110-3403129 MS.gene057037:CDS 40.0%
GATACTAAGATTCGTTGCAC+CGG - chr2.3:3401874-3401893 None:intergenic 40.0%
GCACTTCTATGGAAAGGAAT+TGG + chr2.3:3402606-3402625 MS.gene057037:CDS 40.0%
GCTCATTCATGGAACAATTG+AGG + chr2.3:3400737-3400756 MS.gene057037:CDS 40.0%
GGAAGATCTAACTAATGGTG+AGG + chr2.3:3404048-3404067 MS.gene057037:CDS 40.0%
GGAGAAGCAATCATAGAAAG+TGG + chr2.3:3402995-3403014 MS.gene057037:CDS 40.0%
GGCTGTAAGGGTTATGATTT+GGG + chr2.3:3402076-3402095 MS.gene057037:CDS 40.0%
GTGAATGTCACCTTTGCTTA+TGG - chr2.3:3403828-3403847 None:intergenic 40.0%
GTGGAGTTCCTAGAAAGTTA+TGG + chr2.3:3401689-3401708 MS.gene057037:CDS 40.0%
GTTGATCATCCCATAAGCAA+AGG + chr2.3:3403815-3403834 MS.gene057037:CDS 40.0%
TAGTTCAAGAAAATCGAGCC+TGG - chr2.3:3401930-3401949 None:intergenic 40.0%
TATTGAGATTGCACTCAAGG+TGG + chr2.3:3402832-3402851 MS.gene057037:CDS 40.0%
TCAAAAGGAGGTTGGAAAGT+AGG - chr2.3:3401664-3401683 None:intergenic 40.0%
TCAACTGTTGTGCCTTGATT+TGG - chr2.3:3401420-3401439 None:intergenic 40.0%
TCAATGTGGTATGAACACAC+TGG + chr2.3:3403860-3403879 MS.gene057037:CDS 40.0%
TCCTATTGAGATTGCACTCA+AGG + chr2.3:3402829-3402848 MS.gene057037:CDS 40.0%
TCTCTGTCATTGACAGAGTT+AGG - chr2.3:3402281-3402300 None:intergenic 40.0%
TGGCAGAAAGATAAGAACAG+TGG + chr2.3:3402791-3402810 MS.gene057037:CDS 40.0%
TGGCTGTAAGGGTTATGATT+TGG + chr2.3:3402075-3402094 MS.gene057037:CDS 40.0%
TGTCCAAATAAGACTGGTAG+GGG + chr2.3:3400938-3400957 MS.gene057037:intron 40.0%
TTCCTCAACAAGCACTTCTA+TGG + chr2.3:3402595-3402614 MS.gene057037:CDS 40.0%
TTGGATGATTCTACATCAGC+AGG - chr2.3:3403324-3403343 None:intergenic 40.0%
TTGTACACAAAAGTGGGACA+TGG + chr2.3:3403271-3403290 MS.gene057037:intron 40.0%
! CAGCAAATTTGGAACCAAGT+TGG + chr2.3:3401536-3401555 MS.gene057037:CDS 40.0%
! CAGTATTGAGTATCAGGAAG+AGG - chr2.3:3403112-3403131 None:intergenic 40.0%
! CCTTCTTTTCCCTATTTGCA+AGG - chr2.3:3403060-3403079 None:intergenic 40.0%
! CTGGTCTTTCAATCCTAAGA+TGG + chr2.3:3401765-3401784 MS.gene057037:CDS 40.0%
! GAAGTGCTTGTTGAGGAAAT+AGG - chr2.3:3402593-3402612 None:intergenic 40.0%
! TCTTGAACTGGTTCACTTTC+AGG - chr2.3:3402926-3402945 None:intergenic 40.0%
! TTGGTCCCTTACTCGTATTT+TGG - chr2.3:3403416-3403435 None:intergenic 40.0%
!! CTTAGTAGCTTTGTCCAACT+TGG - chr2.3:3401553-3401572 None:intergenic 40.0%
!! TTCCATAGAAGTGCTTGTTG+AGG - chr2.3:3402600-3402619 None:intergenic 40.0%
AAGTAATCTCTCGGATGTCC+TGG - chr2.3:3403025-3403044 None:intergenic 45.0%
AGAAGAAGGAGTGGCTGTAA+GGG + chr2.3:3402064-3402083 MS.gene057037:CDS 45.0%
AGGGACACAGAAATTGCGAT+CGG + chr2.3:3403767-3403786 MS.gene057037:CDS 45.0%
ATCATAGAAAGTGGTGAGCC+AGG + chr2.3:3403004-3403023 MS.gene057037:CDS 45.0%
CTGAGACATGATCAATCGAC+CGG - chr2.3:3402646-3402665 None:intergenic 45.0%
GAAGGGAAATGAAGGAGAGT+AGG - chr2.3:3400784-3400803 None:intergenic 45.0%
GAATCATTAGCGATTCAGCC+AGG + chr2.3:3401909-3401928 MS.gene057037:intron 45.0%
GAGGTTGGAAAGTAGGTGAA+TGG - chr2.3:3401657-3401676 None:intergenic 45.0%
GATGCTCATGCTTGTGTTAC+TGG + chr2.3:3402467-3402486 MS.gene057037:CDS 45.0%
GCATGTGGGATTTCTGTTTG+AGG - chr2.3:3402005-3402024 None:intergenic 45.0%
GGCACCCTCCAATGAAATAT+TGG - chr2.3:3402766-3402785 None:intergenic 45.0%
GGCTACCAGTTTCATCAAGA+TGG + chr2.3:3403791-3403810 MS.gene057037:CDS 45.0%
GGGATGCTACATTTCCACAA+AGG + chr2.3:3401596-3401615 MS.gene057037:CDS 45.0%
GGTGGTTTAGATTTGTGCGA+CGG + chr2.3:3402317-3402336 MS.gene057037:CDS 45.0%
GTATCAGGAAGAGGAGAATG+TGG - chr2.3:3403103-3403122 None:intergenic 45.0%
GTGAACCAAAGATCGATGGA+CGG + chr2.3:3403740-3403759 MS.gene057037:CDS 45.0%
GTGCAGAGAATGTGCTCAAT+AGG + chr2.3:3403926-3403945 MS.gene057037:CDS 45.0%
TAGCCCCTGCAATATTTGTC+TGG - chr2.3:3402412-3402431 None:intergenic 45.0%
TGAACCAAAGATCGATGGAC+GGG + chr2.3:3403741-3403760 MS.gene057037:CDS 45.0%
TGAAGAGTTTCAAGGGCTGA+GGG + chr2.3:3401576-3401595 MS.gene057037:CDS 45.0%
TGGATCCTTCCCTCTACTAA+TGG + chr2.3:3401459-3401478 MS.gene057037:CDS 45.0%
TGTGATGAACACACATGACG+AGG + chr2.3:3402136-3402155 MS.gene057037:CDS 45.0%
TTCTTGAACTAGACCACGAG+CGG + chr2.3:3401939-3401958 MS.gene057037:intron 45.0%
TTGCTTCGACGTAAGCTTCA+TGG - chr2.3:3402709-3402728 None:intergenic 45.0%
! AGCTTTGGTATCCACGGTTA+TGG - chr2.3:3402258-3402277 None:intergenic 45.0%
! GCACTCCAGTATTGAGTATC+AGG - chr2.3:3403118-3403137 None:intergenic 45.0%
! GTTAGGAGCTTTGGTATCCA+CGG - chr2.3:3402264-3402283 None:intergenic 45.0%
! GTTTTTGTTCCTTGCACCAG+TGG + chr2.3:3403685-3403704 MS.gene057037:intron 45.0%
! TCTGAAACAGACAGCTCAGT+TGG - chr2.3:3401102-3401121 None:intergenic 45.0%
!! AGTCCCCTACCAGTCTTATT+TGG - chr2.3:3400944-3400963 None:intergenic 45.0%
!!! AGGTTTTGAAACCACTGAGC+CGG + chr2.3:3401852-3401871 MS.gene057037:intron 45.0%
AAAGATCGATGGACGGGCAA+AGG + chr2.3:3403747-3403766 MS.gene057037:CDS 50.0%
AAGATCGATGGACGGGCAAA+GGG + chr2.3:3403748-3403767 MS.gene057037:CDS 50.0%
ATAGGTCATCCACTGGTGCA+AGG - chr2.3:3403697-3403716 None:intergenic 50.0%
ATCGTATTAAGGACCGCTCG+TGG - chr2.3:3401955-3401974 None:intergenic 50.0%
CAAGCATGAGCATCATGCCA+TGG - chr2.3:3402461-3402480 None:intergenic 50.0%
CAGAAGAAGGAGTGGCTGTA+AGG + chr2.3:3402063-3402082 MS.gene057037:CDS 50.0%
CTAACCTGCACACCAACACA+AGG - chr2.3:3401978-3401997 None:intergenic 50.0%
CTCTTGGACCTCCTTTGTTG+AGG - chr2.3:3402436-3402455 None:intergenic 50.0%
GACACAGAAATTGCGATCGG+AGG + chr2.3:3403770-3403789 MS.gene057037:CDS 50.0%
GTCATACCAATGTGGCCAGA+AGG + chr2.3:3402896-3402915 MS.gene057037:CDS 50.0%
GTGAAGAGTTTCAAGGGCTG+AGG + chr2.3:3401575-3401594 MS.gene057037:CDS 50.0%
GTTCACTCCAAGCTCGTGAT+AGG + chr2.3:3403166-3403185 MS.gene057037:CDS 50.0%
TCACTTTCAGGCACTCCTTC+TGG - chr2.3:3402914-3402933 None:intergenic 50.0%
TCAGGAAGAGGAGAATGTGG+TGG - chr2.3:3403100-3403119 None:intergenic 50.0%
TTTGCCCGTCCATCGATCTT+TGG - chr2.3:3403748-3403767 None:intergenic 50.0%
! AAGCAATAAGGCGTGCCGAT+AGG + chr2.3:3402723-3402742 MS.gene057037:CDS 50.0%
! TCATGCTTGTGTTACTGGCG+AGG + chr2.3:3402472-3402491 MS.gene057037:CDS 50.0%
!! TCATTGGAGGGTGCCATTTG+TGG + chr2.3:3402771-3402790 MS.gene057037:CDS 50.0%
AAGGAGGTCCAAGAGAGCCA+TGG + chr2.3:3402441-3402460 MS.gene057037:CDS 55.0%
GCATCATGCCATGGCTCTCT+TGG - chr2.3:3402452-3402471 None:intergenic 55.0%
! CGATCCTTGTGTTGGTGTGC+AGG + chr2.3:3401971-3401990 MS.gene057037:intron 55.0%
! TGCTTGTGTTACTGGCGAGG+CGG + chr2.3:3402475-3402494 MS.gene057037:CDS 55.0%
GGCACTCCTTCTGGCCACAT+TGG - chr2.3:3402905-3402924 None:intergenic 60.0%
TGTTACTGGCGAGGCGGCTT+GGG + chr2.3:3402481-3402500 MS.gene057037:CDS 60.0%
!! GATTCGTTGCACCGGCTCAG+TGG - chr2.3:3401866-3401885 None:intergenic 60.0%
!! GCAGGGGCTAGCCTCAACAA+AGG + chr2.3:3402422-3402441 MS.gene057037:CDS 60.0%
!! GGGGCTAGCCTCAACAAAGG+AGG + chr2.3:3402425-3402444 MS.gene057037:CDS 60.0%
! GTGTTACTGGCGAGGCGGCT+TGG + chr2.3:3402480-3402499 MS.gene057037:CDS 65.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 3400729 3404144 3400729 ID=MS.gene057037
chr2.3 mRNA 3400729 3404144 3400729 ID=MS.gene057037.t1;Parent=MS.gene057037
chr2.3 exon 3400729 3400806 3400729 ID=MS.gene057037.t1.exon1;Parent=MS.gene057037.t1
chr2.3 CDS 3400729 3400806 3400729 ID=cds.MS.gene057037.t1;Parent=MS.gene057037.t1
chr2.3 exon 3401235 3401792 3401235 ID=MS.gene057037.t1.exon2;Parent=MS.gene057037.t1
chr2.3 CDS 3401235 3401792 3401235 ID=cds.MS.gene057037.t1;Parent=MS.gene057037.t1
chr2.3 exon 3401993 3403187 3401993 ID=MS.gene057037.t1.exon3;Parent=MS.gene057037.t1
chr2.3 CDS 3401993 3403187 3401993 ID=cds.MS.gene057037.t1;Parent=MS.gene057037.t1
chr2.3 exon 3403705 3404144 3403705 ID=MS.gene057037.t1.exon4;Parent=MS.gene057037.t1
chr2.3 CDS 3403705 3404144 3403705 ID=cds.MS.gene057037.t1;Parent=MS.gene057037.t1
Gene Sequence

>MS.gene057037

ATGGATAAGCTCATTCATGGAACAATTGAGGCTACTGTCTTCAATGCAACTCCCTACTCTCCTTCATTTCCCTTCAATGTGAGCTCTAATGAACTCTTAAGATTAAATATATTATGATCCCTATAATATTGACAAAATTTGATCCTTCTCTTTATTTTTTTTTTTATTCCTCTATAGTCATACTTGTAACAATATTTTGTTTTGTTTTTTGTCCAAATAAGACTGGTAGGGGACTAAAAAGTAAAAATACACAACTTTATTAAATCTATGAAATGAAAATAATTTTTTTTATTGTTTATTGATAAATGTTAGTTTTCAGAGTTCGAACTTTGGACCTCCTGTTATTATTTCTTCAATGTCTCTTAGCTCACCAACTGAGCTGTCTGTTTCAGACTTAAATAAATAATTTGTTTATAGAGTTAAACTAAGCTTTGTCAATTTTATAGAAACCAACTACATATTCTATAATGTGAACTCATAAAATATGTCAATTTTTGTGTTTTCAGTGTTTATTTGTAAATGGAAAGCCTGCTTATGTGACAATCAAGATAGACAATAAGAAAGTGGCAAAAACAACACAAGAAAGTGAACGTGTTTGGAACCAAACATTTCAGATTCAGTGTGCTCATCTAGCTGATTCAACCATCACCATTACACTGAAAACAACATGTACCATATTAGGAAAATTCCAAATCAAGGCACAACAGTTGAAGGAAGACAGTTTGATCAATGGATCCTTCCCTCTACTAATGGAAAATGGTAAACCAAATCAAGAACTAAAATTAAGGTTTATATTATGGTTCAAGCCAGCAAATTTGGAACCAAGTTGGACAAAGCTACTAAGTAGTGAAGAGTTTCAAGGGCTGAGGGATGCTACATTTCCACAAAGGTCTAATTGTCATGTTAAGCTCTATCATGATGCTCACCATTCACCTACTTTCCAACCTCCTTTTGATAATTGTGGAGTTCCTAGAAAGTTATGGGAGGATGTTTATAAAGCTATTGAGGGTGCAAAATATTTAGTATATATTGCAGGCTGGTCTTTCAATCCTAAGATGGTTCTGGTACATATATAATCTCATTTCATACTCTACATTTTATATTGATATACATTTTTTTGGTTAGGTTTTGAAACCACTGAGCCGGTGCAACGAATCTTAGTATCAGCTCGGTTTGGAACGAATCATTAGCGATTCAGCCAGGCTCGATTTTCTTGAACTAGACCACGAGCGGTCCTTAATACGATCCTTGTGTTGGTGTGCAGGTTAGAGATCCTCAAACAGAAATCCCACATGCTAGAGAAATAAAGTTGGGCGAGCTATTGAAAAAGAAAGCAGAAGAAGGAGTGGCTGTAAGGGTTATGATTTGGGATGATGAAACATCATTTCCATTTATCAAGAACAAAGGTGTGATGAACACACATGACGAGGAAGCTTTTGCATACTTTAAACACACAAAAGTAGTATGCAGAAGGTGTCCTAGATTACATGACAAATTCCCTACAATCTTTGCTCATCATCAAAAAACCATAACCGTGGATACCAAAGCTCCTAACTCTGTCAATGACAGAGAAATTATGAGCTTTTTGGGTGGTTTAGATTTGTGCGACGGTCGATATGATACCGAGAAACATTCATTGTTTGAAACACTTGCTGAGGAATCACATTACCATGATTTCTACCAGACAAATATTGCAGGGGCTAGCCTCAACAAAGGAGGTCCAAGAGAGCCATGGCATGATGCTCATGCTTGTGTTACTGGCGAGGCGGCTTGGGATGTGTTAGCTAATTTTGAACAAAGATGGACAAAGCAATGTGATTCATCTCTTCTAGTCCCTGCAAACACCTTAGAAAATCTCATTCCTATTTCCTCAACAAGCACTTCTATGGAAAGGAATTGGAAAGTGCAAGTATACCGGTCGATTGATCATGTCTCAGCTAGCCAACTGTTTAGAAAGCTAACAGTTGAGAGTAGTATCCATGAAGCTTACGTCGAAGCAATAAGGCGTGCCGATAGGTTTGTGTACATTGAAAACCAATATTTCATTGGAGGGTGCCATTTGTGGCAGAAAGATAAGAACAGTGGATGCACAAATTTGATTCCTATTGAGATTGCACTCAAGGTGGTCAACAAGATTAAAGCAAGAGAAAGGTTTGCAGTGTATATAGTCATACCAATGTGGCCAGAAGGAGTGCCTGAAAGTGAACCAGTTCAAGATATACTGCATTGGACAAGAGAAACAATGACAATGATGTATAAGTTGATTGGAGAAGCAATCATAGAAAGTGGTGAGCCAGGACATCCGAGAGATTACTTGAATTTCTTTTGCCTTGCAAATAGGGAAAAGAAGGAAAATGAGGAATATCTTCCACCACATTCTCCTCTTCCTGATACTCAATACTGGAGTGCACAGAAAAATAGAAGATTCATGGTTTATGTTCACTCCAAGCTCGTGATAGGTATGATTAAACCATAAATATATGTTGGTTTAATTGCAGTTTTGGTCATCATATTTTCACCCGCTCACGAAATTTGTAGACTTTTGTACACAAAAGTGGGACATGGCAAATTTTCTATTGACGTGTCATAAAACCTGCTGATGTAGAATCATCCAAGTGAATTTATAATACATAGGTTTCTATGCCACGTCAATAAAAAAAAATTGTCATGTTGTCACTTTAGATCCAAAATACGAGTAAGGGACCAAATAATTGGATTTTAAAAGGAGGGATCGATTTCGTAAGCGAGAGAAAATAAGAAGACCAAAACCATGATCAAGCCATATATATATGTTCAACAACTAACTACTGTCACTATGTATGTTATTTTTAGCTATTCAACCTTTCCAATACAAAAACTTAATAGGAGTGATTTTTTACAATTAAATTCATTGCAATAACTCATTTTAGAAAGAGAAAACACCATTCATGATCTTGGTTTAACTAAAATGTGTTTTGTTTTTGTTCCTTGCACCAGTGGATGACCTATATATACTAATAGGATCAGCAAATGTGAACCAAAGATCGATGGACGGGCAAAGGGACACAGAAATTGCGATCGGAGGCTACCAGTTTCATCAAGATGGAGTTGATCATCCCATAAGCAAAGGTGACATTCACGAATACAGAATGTCAATGTGGTATGAACACACTGGTAGTGCTGAGAAGTTGTTTTTAGAGCCAGAAAGTTTAGAATGTGTGCAGAGAATGTGCTCAATAGGAGATAAAATGTGGAAAATCTACAGCAGTGAAGAAATTATGGACATGGAGGGTGTGCACCTAGTAACTTACCCCATGATAGTAACACAAAATGGATCTGTGGAAGATCTAACTAATGGTGAGGATCATTTTCCTGATACAAAAGCTCTAGTGAAAGGAACAAGATCAAAATTATTACCCTCTGTCATTACCACTTAG
Protein sequence

>MS.gene057037.t1

MDKLIHGTIEATVFNATPYSPSFPFNCLFVNGKPAYVTIKIDNKKVAKTTQESERVWNQTFQIQCAHLADSTITITLKTTCTILGKFQIKAQQLKEDSLINGSFPLLMENGKPNQELKLRFILWFKPANLEPSWTKLLSSEEFQGLRDATFPQRSNCHVKLYHDAHHSPTFQPPFDNCGVPRKLWEDVYKAIEGAKYLVYIAGWSFNPKMVLVRDPQTEIPHAREIKLGELLKKKAEEGVAVRVMIWDDETSFPFIKNKGVMNTHDEEAFAYFKHTKVVCRRCPRLHDKFPTIFAHHQKTITVDTKAPNSVNDREIMSFLGGLDLCDGRYDTEKHSLFETLAEESHYHDFYQTNIAGASLNKGGPREPWHDAHACVTGEAAWDVLANFEQRWTKQCDSSLLVPANTLENLIPISSTSTSMERNWKVQVYRSIDHVSASQLFRKLTVESSIHEAYVEAIRRADRFVYIENQYFIGGCHLWQKDKNSGCTNLIPIEIALKVVNKIKARERFAVYIVIPMWPEGVPESEPVQDILHWTRETMTMMYKLIGEAIIESGEPGHPRDYLNFFCLANREKKENEEYLPPHSPLPDTQYWSAQKNRRFMVYVHSKLVIVDDLYILIGSANVNQRSMDGQRDTEIAIGGYQFHQDGVDHPISKGDIHEYRMSMWYEHTGSAEKLFLEPESLECVQRMCSIGDKMWKIYSSEEIMDMEGVHLVTYPMIVTQNGSVEDLTNGEDHFPDTKALVKGTRSKLLPSVITT