Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028282.t1 | XP_004504666.1 | 92.8 | 347 | 24 | 1 | 4 | 349 | 54 | 400 | 6.00E-174 | 620.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028282.t1 | Q42546 | 70.5 | 352 | 99 | 3 | 3 | 349 | 2 | 353 | 6.0e-130 | 465.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028282.t1 | A0A1S2YGY7 | 92.8 | 347 | 24 | 1 | 4 | 349 | 54 | 400 | 4.3e-174 | 620.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene028282 | MS.gene046100 | PPI |
| MS.gene29934 | MS.gene028282 | PPI |
| MS.gene070607 | MS.gene028282 | PPI |
| MS.gene02315 | MS.gene028282 | PPI |
| MS.gene028282 | MS.gene01744 | PPI |
| MS.gene01364 | MS.gene028282 | PPI |
| MS.gene002387 | MS.gene028282 | PPI |
| MS.gene028282 | MS.gene047523 | PPI |
| MS.gene028282 | MS.gene01773 | PPI |
| MS.gene028282 | MS.gene01334 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028282.t1 | MTR_4g094672 | 94.167 | 240 | 13 | 1 | 57 | 295 | 1 | 240 | 2.23e-168 | 470 |
| MS.gene028282.t1 | MTR_8g464260 | 41.192 | 369 | 188 | 6 | 4 | 343 | 6 | 374 | 1.57e-89 | 273 |
| MS.gene028282.t1 | MTR_2g012510 | 43.503 | 354 | 165 | 8 | 4 | 324 | 91 | 442 | 2.81e-89 | 276 |
| MS.gene028282.t1 | MTR_4g090525 | 37.714 | 350 | 184 | 9 | 4 | 324 | 82 | 426 | 2.06e-62 | 206 |
| MS.gene028282.t1 | MTR_2g011680 | 32.527 | 372 | 209 | 12 | 2 | 341 | 47 | 408 | 4.88e-48 | 167 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028282.t1 | AT5G63980 | 76.420 | 352 | 78 | 3 | 3 | 349 | 2 | 353 | 0.0 | 525 |
| MS.gene028282.t1 | AT5G63990 | 62.500 | 344 | 123 | 4 | 3 | 343 | 2 | 342 | 3.65e-148 | 422 |
| MS.gene028282.t1 | AT5G09290 | 59.302 | 344 | 127 | 3 | 4 | 345 | 3 | 335 | 4.25e-147 | 419 |
| MS.gene028282.t1 | AT5G64000 | 63.478 | 345 | 121 | 3 | 3 | 345 | 2 | 343 | 1.26e-146 | 418 |
| MS.gene028282.t1 | AT5G63990 | 61.486 | 296 | 108 | 4 | 3 | 295 | 2 | 294 | 3.77e-122 | 354 |
| MS.gene028282.t1 | AT5G64000 | 61.873 | 299 | 109 | 3 | 49 | 345 | 5 | 300 | 1.46e-121 | 352 |
| MS.gene028282.t1 | AT5G54390 | 42.192 | 365 | 183 | 9 | 3 | 341 | 5 | 367 | 3.28e-85 | 262 |
| MS.gene028282.t1 | AT4G05090 | 32.507 | 363 | 203 | 12 | 2 | 338 | 44 | 390 | 4.78e-42 | 151 |
| MS.gene028282.t1 | AT4G05090 | 28.926 | 363 | 184 | 11 | 2 | 338 | 44 | 358 | 8.51e-33 | 125 |
Find 76 sgRNAs with CRISPR-Local
Find 283 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTAAACTCTATTAGGATTC+AGG | 0.211302 | 4.2:+17189810 | MS.gene028282:intron |
| CGTTGGTCGACACTGGGTTT+TGG | 0.242248 | 4.2:+17189986 | MS.gene028282:CDS |
| TGAGAAGTCCAAAGGGTTTC+CGG | 0.253320 | 4.2:-17192982 | None:intergenic |
| TCCTCGGCCACTAATGAAAA+TGG | 0.316778 | 4.2:-17189719 | None:intergenic |
| CCTGTCACTGTTGCTGATTA+TGG | 0.316799 | 4.2:+17189325 | MS.gene028282:CDS |
| ATGATTGCCAGTGGAAGATT+TGG | 0.322685 | 4.2:-17190208 | None:intergenic |
| AAAGCGAAGGCATCAAGTTC+TGG | 0.343253 | 4.2:-17193049 | None:intergenic |
| TACCCTTTAGTACCATCTAT+TGG | 0.348231 | 4.2:-17190011 | None:intergenic |
| TTTGACAGGTTCACAGGTCT+TGG | 0.349966 | 4.2:+17189661 | MS.gene028282:intron |
| AAGTTTCTTGATGTTGATAC+TGG | 0.362764 | 4.2:+17193011 | MS.gene028282:CDS |
| AAGAAGAATGTGGTTGATTC+GGG | 0.366084 | 4.2:-17190234 | None:intergenic |
| AACAACGGACGACGTGCTTA+AGG | 0.370635 | 4.2:+17189932 | MS.gene028282:CDS |
| GAAGAAGAATGTGGTTGATT+CGG | 0.372917 | 4.2:-17190235 | None:intergenic |
| GTGGTTCCGTTGGTCGACAC+TGG | 0.374689 | 4.2:+17189979 | MS.gene028282:CDS |
| GTGCTTAAGGCTATTGATAA+TGG | 0.378671 | 4.2:+17189945 | MS.gene028282:CDS |
| CCACATTCTTCTTCTGAAGT+TGG | 0.400858 | 4.2:+17190244 | MS.gene028282:CDS |
| ATATGTTCCGTTGCCAACTT+TGG | 0.409838 | 4.2:-17190281 | None:intergenic |
| CTTGCTTCAGAAAGTACAAA+AGG | 0.416331 | 4.2:+17189261 | MS.gene028282:intron |
| AGATGCTGCCGGAAACCCTT+TGG | 0.422474 | 4.2:+17192974 | MS.gene028282:CDS |
| GAGCTAATGCTATGGCATAT+TGG | 0.422687 | 4.2:-17190144 | None:intergenic |
| AGATCAAGGGAAAGTTGTAT+TGG | 0.434380 | 4.2:+17190171 | MS.gene028282:CDS |
| ATATATAGCCCCATCTCCTC+TGG | 0.438111 | 4.2:-17190706 | None:intergenic |
| CATTTGTTTGACAGGTTCAC+AGG | 0.441832 | 4.2:+17189655 | MS.gene028282:intron |
| AACCCTTTGGACTTCTCAAA+AGG | 0.444660 | 4.2:+17192987 | MS.gene028282:CDS |
| GCCTGGCTGTCAATTCTGAC+TGG | 0.455260 | 4.2:-17190666 | None:intergenic |
| GATCCAATAGATGGTACTAA+AGG | 0.456630 | 4.2:+17190008 | MS.gene028282:CDS |
| GGACGGTTCTACACAAACTA+AGG | 0.461170 | 4.2:+17190315 | MS.gene028282:CDS |
| AATCTTCCACTGGCAATCAT+TGG | 0.464699 | 4.2:+17190211 | MS.gene028282:CDS |
| TTAAACTCTATTAGGATTCA+GGG | 0.465154 | 4.2:+17189811 | MS.gene028282:intron |
| TCTCGCTGCTCGTCTCTGTC+AGG | 0.468930 | 4.2:+17189158 | MS.gene028282:CDS |
| GGAGCTCTGTCCAGAGGAGA+TGG | 0.471942 | 4.2:+17190696 | MS.gene028282:CDS |
| GAAAGTTGTATTGGGTGTCT+TGG | 0.473874 | 4.2:+17190180 | MS.gene028282:CDS |
| TCGACCAACGGAACCACCTT+CGG | 0.474544 | 4.2:-17189973 | None:intergenic |
| GCATTAGCTCTGCTAGATCA+AGG | 0.483237 | 4.2:+17190157 | MS.gene028282:CDS |
| GGCTTGTCCAAATCTTCCAC+TGG | 0.487579 | 4.2:+17190201 | MS.gene028282:CDS |
| GATCAAGGGAAAGTTGTATT+GGG | 0.494154 | 4.2:+17190172 | MS.gene028282:CDS |
| TAATGCGCTTCAACGTATCC+TGG | 0.496105 | 4.2:-17189854 | None:intergenic |
| ATCCAATAGATGGTACTAAA+GGG | 0.503600 | 4.2:+17190009 | MS.gene028282:CDS |
| ATTGACAGCCAGGCAAAATA+CGG | 0.504693 | 4.2:+17190675 | MS.gene028282:CDS |
| TGGTTCCGTTGGTCGACACT+GGG | 0.508761 | 4.2:+17189980 | MS.gene028282:CDS |
| GAGTTAAAATTTCACCTCCT+CGG | 0.512994 | 4.2:-17189735 | None:intergenic |
| CCATAATCAGCAACAGTGAC+AGG | 0.514252 | 4.2:-17189325 | None:intergenic |
| TTCTTTGCCAAAGTTGGCAA+CGG | 0.521795 | 4.2:+17190274 | MS.gene028282:CDS |
| AATGATACTCTCGCTAATGA+AGG | 0.531200 | 4.2:+17189888 | MS.gene028282:CDS |
| ACTAATGAAAATGGTTGAGA+AGG | 0.533566 | 4.2:-17189710 | None:intergenic |
| ACAGAGACGAGCAGCGAGAG+TGG | 0.534318 | 4.2:-17189154 | None:intergenic |
| GAGCTCTGTCCAGAGGAGAT+GGG | 0.536588 | 4.2:+17190697 | MS.gene028282:CDS |
| CGGAACATATATGCAAGCAT+TGG | 0.540261 | 4.2:+17190294 | MS.gene028282:CDS |
| GCCAGTCAGAATTGACAGCC+AGG | 0.556165 | 4.2:+17190665 | MS.gene028282:CDS |
| AAAATATGGGATCATGCTGC+TGG | 0.556471 | 4.2:+17190759 | MS.gene028282:CDS |
| GGATTCAGGGGATCTTCGTA+AGG | 0.557759 | 4.2:+17189824 | MS.gene028282:intron |
| TCTTCGTAAGGAAAGTGGCC+AGG | 0.562989 | 4.2:+17189836 | MS.gene028282:CDS |
| AAGTCCGAAGGTGGTTCCGT+TGG | 0.568271 | 4.2:+17189969 | MS.gene028282:CDS |
| TTCAATGTCGTCTTACGACA+AGG | 0.579282 | 4.2:+17189107 | None:intergenic |
| TGCTTCTTCTGGATTATCAA+CGG | 0.579300 | 4.2:-17190441 | None:intergenic |
| TTTCACGGTATCCTTTGTTG+GGG | 0.579406 | 4.2:-17190737 | None:intergenic |
| ATCTAGCAGAGCTAATGCTA+TGG | 0.585894 | 4.2:-17190152 | None:intergenic |
| GGGGATCTTCGTAAGGAAAG+TGG | 0.588350 | 4.2:+17189831 | MS.gene028282:CDS |
| TTAACTGCTCTCAAAAGCGA+AGG | 0.588785 | 4.2:-17193062 | None:intergenic |
| GGTATTGTCTCAGATGCTGC+CGG | 0.589379 | 4.2:+17192963 | MS.gene028282:CDS |
| CATTAGCTCTGCTAGATCAA+GGG | 0.596216 | 4.2:+17190158 | MS.gene028282:CDS |
| TATTTGCGTTTCCCCAACAA+AGG | 0.603160 | 4.2:+17190726 | MS.gene028282:CDS |
| TTCGGGCCAATGATTGCCAG+TGG | 0.607267 | 4.2:-17190217 | None:intergenic |
| AGCTCTGTCCAGAGGAGATG+GGG | 0.607532 | 4.2:+17190698 | MS.gene028282:CDS |
| ACATATATGCAAGCATTGGA+CGG | 0.618173 | 4.2:+17190298 | MS.gene028282:CDS |
| TAAACTCTATTAGGATTCAG+GGG | 0.620644 | 4.2:+17189812 | MS.gene028282:intron |
| CAAAACCCAGTGTCGACCAA+CGG | 0.625868 | 4.2:-17189985 | None:intergenic |
| ATTGATAATGGTAAGTCCGA+AGG | 0.626317 | 4.2:+17189957 | MS.gene028282:CDS |
| TGGCTGTCAATTCTGACTGG+CGG | 0.630579 | 4.2:-17190663 | None:intergenic |
| GCTGGCTGTATTGTTGTGAG+TGG | 0.637794 | 4.2:+17190777 | MS.gene028282:CDS |
| GATAATGGTAAGTCCGAAGG+TGG | 0.645047 | 4.2:+17189960 | MS.gene028282:CDS |
| TGGCTTCATGAACAGAAACT+CGG | 0.649975 | 4.2:+17190630 | MS.gene028282:intron |
| TGTACTTCTACAGAAGCTGG+AGG | 0.680394 | 4.2:+17192942 | MS.gene028282:intron |
| AAATACGGAGCTCTGTCCAG+AGG | 0.682404 | 4.2:+17190690 | MS.gene028282:CDS |
| CCAACTTCAGAAGAAGAATG+TGG | 0.683606 | 4.2:-17190244 | None:intergenic |
| TACGCTTGACGGATATCACA+AGG | 0.686096 | 4.2:-17193111 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAATGGTAA+AGG | - | chr4.2:17190562-17190581 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAATGGTAAA+GGG | - | chr4.2:17190561-17190580 | None:intergenic | 10.0% |
| !! | ATTATACTTTACATAATTTA+AGG | + | chr4.2:17191610-17191629 | MS.gene028282:intron | 10.0% |
| !!! | TACAAGTTTTTTTTTTTTTT+GGG | + | chr4.2:17189463-17189482 | MS.gene028282:intron | 10.0% |
| !!! | TTACAAGTTTTTTTTTTTTT+TGG | + | chr4.2:17189462-17189481 | MS.gene028282:intron | 10.0% |
| !! | AAAAAAAAAAAATGGTAAAG+GGG | - | chr4.2:17190560-17190579 | None:intergenic | 15.0% |
| !!! | AATTTGTTTTTAAGAGATTA+TGG | + | chr4.2:17189376-17189395 | MS.gene028282:intron | 15.0% |
| !!! | ATTTGTTTTTAAGAGATTAT+GGG | + | chr4.2:17189377-17189396 | MS.gene028282:intron | 15.0% |
| !! | AAAAAAAAAAATGGTAAAGG+GGG | - | chr4.2:17190559-17190578 | None:intergenic | 20.0% |
| !! | AAAAAACTTGTAAGATTGTT+TGG | - | chr4.2:17189455-17189474 | None:intergenic | 20.0% |
| !! | AAAAACTTGTAAGATTGTTT+GGG | - | chr4.2:17189454-17189473 | None:intergenic | 20.0% |
| !! | AAATTAAAGAAGAACCAATA+AGG | - | chr4.2:17192366-17192385 | None:intergenic | 20.0% |
| !! | CAAAGTATAGATTTATGTAT+GGG | + | chr4.2:17191469-17191488 | MS.gene028282:intron | 20.0% |
| !! | GTTAGAAAAAACAGTTAAAT+GGG | + | chr4.2:17191418-17191437 | MS.gene028282:intron | 20.0% |
| !! | TAAATATTGCAACATGTTAA+CGG | - | chr4.2:17192848-17192867 | None:intergenic | 20.0% |
| !! | TATAAAGAAAATGTGTCAAA+TGG | - | chr4.2:17192507-17192526 | None:intergenic | 20.0% |
| !! | TCAAAGTATAGATTTATGTA+TGG | + | chr4.2:17191468-17191487 | MS.gene028282:intron | 20.0% |
| !! | TTATAACTTATCAACAAAGA+AGG | - | chr4.2:17192300-17192319 | None:intergenic | 20.0% |
| !! | TTTAACTCTTACATATTTCT+TGG | + | chr4.2:17189750-17189769 | MS.gene028282:intron | 20.0% |
| !! | TTTAGTGTTTAAACTCTATT+AGG | + | chr4.2:17189803-17189822 | MS.gene028282:intron | 20.0% |
| !!! | AAGTTTTTTTTTTTTTTGGG+TGG | + | chr4.2:17189466-17189485 | MS.gene028282:intron | 20.0% |
| !!! | ACTTTGTCAAATTATTTTTC+TGG | + | chr4.2:17191642-17191661 | MS.gene028282:intron | 20.0% |
| !!! | TAACTTTTCTACTTTAACAA+CGG | + | chr4.2:17189917-17189936 | MS.gene028282:CDS | 20.0% |
| !!! | TAGAACAATTTTTCATAACA+AGG | - | chr4.2:17190965-17190984 | None:intergenic | 20.0% |
| !!! | TGTTTAAGATAACAAAATTC+AGG | - | chr4.2:17192399-17192418 | None:intergenic | 20.0% |
| ! | AAGGCTTATTGAAAGTTAAA+CGG | - | chr4.2:17192454-17192473 | None:intergenic | 25.0% |
| ! | CGTTAGAAAAAACAGTTAAA+TGG | + | chr4.2:17191417-17191436 | MS.gene028282:intron | 25.0% |
| ! | GTTGATTACTAAATCCTTAT+TGG | + | chr4.2:17192349-17192368 | MS.gene028282:intron | 25.0% |
| ! | TCGTTATAGGTTAAGTTATT+TGG | + | chr4.2:17191529-17191548 | MS.gene028282:intron | 25.0% |
| ! | TTAAACTCTATTAGGATTCA+GGG | + | chr4.2:17189811-17189830 | MS.gene028282:intron | 25.0% |
| ! | TTTAAACTCTATTAGGATTC+AGG | + | chr4.2:17189810-17189829 | MS.gene028282:intron | 25.0% |
| !! | CAAGTATAATGATTTTCAGT+CGG | - | chr4.2:17190071-17190090 | None:intergenic | 25.0% |
| !! | CATTTTTGTAAGAGAACAAA+TGG | - | chr4.2:17192330-17192349 | None:intergenic | 25.0% |
| !! | TTACCAAACAGAATTCTTTT+GGG | - | chr4.2:17191020-17191039 | None:intergenic | 25.0% |
| !! | TTTACCAAACAGAATTCTTT+TGG | - | chr4.2:17191021-17191040 | None:intergenic | 25.0% |
| !!! | AATGAATTTTAACACCTTGA+AGG | + | chr4.2:17192700-17192719 | MS.gene028282:intron | 25.0% |
| !!! | ATGAATTTTAACACCTTGAA+GGG | + | chr4.2:17192701-17192720 | MS.gene028282:intron | 25.0% |
| !!! | CTTTGTGGTGATTATTTTTT+TGG | + | chr4.2:17192634-17192653 | MS.gene028282:intron | 25.0% |
| !!! | TTTTTTTTTTTTTTGGGTGG+TGG | + | chr4.2:17189469-17189488 | MS.gene028282:intron | 25.0% |
| AAACCCAAAAGAATTCTGTT+TGG | + | chr4.2:17191014-17191033 | MS.gene028282:intron | 30.0% | |
| AAGATTAGAAGTAGAAGACA+CGG | - | chr4.2:17192894-17192913 | None:intergenic | 30.0% | |
| AAGGATACCGTGAAAAAATA+TGG | + | chr4.2:17190745-17190764 | MS.gene028282:CDS | 30.0% | |
| AAGTTTCTTGATGTTGATAC+TGG | + | chr4.2:17193011-17193030 | MS.gene028282:CDS | 30.0% | |
| ACTAATGAAAATGGTTGAGA+AGG | - | chr4.2:17189713-17189732 | None:intergenic | 30.0% | |
| ACTACTGCAAATAAATTCCA+AGG | - | chr4.2:17192680-17192699 | None:intergenic | 30.0% | |
| AGGATACCGTGAAAAAATAT+GGG | + | chr4.2:17190746-17190765 | MS.gene028282:CDS | 30.0% | |
| ATCCAATAGATGGTACTAAA+GGG | + | chr4.2:17190009-17190028 | MS.gene028282:CDS | 30.0% | |
| CATGCTTATGAAGAAAAGAT+GGG | - | chr4.2:17190885-17190904 | None:intergenic | 30.0% | |
| CGACTGAAAATCATTATACT+TGG | + | chr4.2:17190069-17190088 | MS.gene028282:intron | 30.0% | |
| CTCCTCTTACAAAACTATAA+TGG | - | chr4.2:17190123-17190142 | None:intergenic | 30.0% | |
| CTTAACCAAAAAGACATGAA+AGG | - | chr4.2:17190813-17190832 | None:intergenic | 30.0% | |
| GACAATGCATAATATATGCA+AGG | - | chr4.2:17189514-17189533 | None:intergenic | 30.0% | |
| GATGATGATAACAAGACAAT+TGG | - | chr4.2:17190405-17190424 | None:intergenic | 30.0% | |
| GATTCAGTATCTAAAGATCT+AGG | + | chr4.2:17191495-17191514 | MS.gene028282:intron | 30.0% | |
| TAAACTCTATTAGGATTCAG+GGG | + | chr4.2:17189812-17189831 | MS.gene028282:intron | 30.0% | |
| TAGTAAAGAAGACATACTGA+AGG | - | chr4.2:17192473-17192492 | None:intergenic | 30.0% | |
| TCAAAAAATGATGCTTCTTC+TGG | - | chr4.2:17190455-17190474 | None:intergenic | 30.0% | |
| TCATGAAGCCATAATGTTTA+AGG | - | chr4.2:17190621-17190640 | None:intergenic | 30.0% | |
| TGATAGAGCAGAAATTTATG+TGG | + | chr4.2:17192773-17192792 | MS.gene028282:intron | 30.0% | |
| TGTAAGAGAACAAATGGATA+TGG | - | chr4.2:17192324-17192343 | None:intergenic | 30.0% | |
| TTACATATTTCTTGGACATG+AGG | + | chr4.2:17189758-17189777 | MS.gene028282:intron | 30.0% | |
| TTTGCTTACATTTGTTTGAC+AGG | + | chr4.2:17189647-17189666 | MS.gene028282:intron | 30.0% | |
| ! | AATATTTCTGTGCTTGAGAT+TGG | + | chr4.2:17192804-17192823 | MS.gene028282:intron | 30.0% |
| ! | GAAACTTTTGCTTATATCCT+CGG | + | chr4.2:17190365-17190384 | MS.gene028282:intron | 30.0% |
| ! | TTCTCAACCATTTTCATTAG+TGG | + | chr4.2:17189712-17189731 | MS.gene028282:CDS | 30.0% |
| ! | TTCTTCCTTTCATGTCTTTT+TGG | + | chr4.2:17190805-17190824 | MS.gene028282:intron | 30.0% |
| !! | CATTTGATGTTGTTGACTTA+GGG | - | chr4.2:17189195-17189214 | None:intergenic | 30.0% |
| !! | CTGGATTTTAGTAGTATTAC+CGG | + | chr4.2:17191661-17191680 | MS.gene028282:intron | 30.0% |
| !! | GGTTTTCTCTGATTTAAGTT+AGG | + | chr4.2:17192571-17192590 | MS.gene028282:intron | 30.0% |
| !! | TACAGTGTTTGTTTCTGTTA+AGG | + | chr4.2:17192045-17192064 | MS.gene028282:intron | 30.0% |
| !! | TGGATTTTAGTAGTATTACC+GGG | + | chr4.2:17191662-17191681 | MS.gene028282:intron | 30.0% |
| !! | TTTACAGTGTTTGTTTCTGT+AGG | + | chr4.2:17191889-17191908 | MS.gene028282:intron | 30.0% |
| !!! | CATGATCCCATATTTTTTCA+CGG | - | chr4.2:17190755-17190774 | None:intergenic | 30.0% |
| !!! | GTGATTATTTTTTTGGACTC+TGG | + | chr4.2:17192641-17192660 | MS.gene028282:intron | 30.0% |
| !!! | TGCCATTATAGTTTTGTAAG+AGG | + | chr4.2:17190118-17190137 | MS.gene028282:intron | 30.0% |
| !!! | TTTTTTCTAACGTGTTTCAG+TGG | - | chr4.2:17191409-17191428 | None:intergenic | 30.0% |
| AAAATGGTAAAGGGGGAAAA+TGG | - | chr4.2:17190552-17190571 | None:intergenic | 35.0% | |
| AACCAAACAAGTCCTAAATC+TGG | - | chr4.2:17190937-17190956 | None:intergenic | 35.0% | |
| AAGCCATAATGTTTAAGGAC+TGG | - | chr4.2:17190616-17190635 | None:intergenic | 35.0% | |
| AATAAGCTGAAAACAGCTTC+TGG | + | chr4.2:17189400-17189419 | MS.gene028282:intron | 35.0% | |
| AATGATACTCTCGCTAATGA+AGG | + | chr4.2:17189888-17189907 | MS.gene028282:CDS | 35.0% | |
| AATTGTACTTCTACAGAAGC+TGG | + | chr4.2:17192939-17192958 | MS.gene028282:intron | 35.0% | |
| AGAACACGTTTGAAAATGGA+CGG | + | chr4.2:17191117-17191136 | MS.gene028282:intron | 35.0% | |
| AGATCAAGGGAAAGTTGTAT+TGG | + | chr4.2:17190171-17190190 | MS.gene028282:CDS | 35.0% | |
| AGTGAGAACACGTTTGAAAA+TGG | + | chr4.2:17191113-17191132 | MS.gene028282:intron | 35.0% | |
| ATTCATGCTGAATCGACAAA+AGG | + | chr4.2:17192542-17192561 | MS.gene028282:intron | 35.0% | |
| ATTGAAAGTTAAACGGAGAG+TGG | - | chr4.2:17192447-17192466 | None:intergenic | 35.0% | |
| CATAATATATGCAAGGTCTG+AGG | - | chr4.2:17189507-17189526 | None:intergenic | 35.0% | |
| GAAGAAGAATGTGGTTGATT+CGG | - | chr4.2:17190238-17190257 | None:intergenic | 35.0% | |
| GACAATTGGTCATAATGCAA+CGG | - | chr4.2:17190391-17190410 | None:intergenic | 35.0% | |
| GAGTTAAAATTTCACCTCCT+CGG | - | chr4.2:17189738-17189757 | None:intergenic | 35.0% | |
| GATCAAGGGAAAGTTGTATT+GGG | + | chr4.2:17190172-17190191 | MS.gene028282:CDS | 35.0% | |
| GATCCAATAGATGGTACTAA+AGG | + | chr4.2:17190008-17190027 | MS.gene028282:CDS | 35.0% | |
| GCATGCTTATGAAGAAAAGA+TGG | - | chr4.2:17190886-17190905 | None:intergenic | 35.0% | |
| GTATAGATTTATGTATGGGC+TGG | + | chr4.2:17191473-17191492 | MS.gene028282:intron | 35.0% | |
| GTGCTTAAGGCTATTGATAA+TGG | + | chr4.2:17189945-17189964 | MS.gene028282:CDS | 35.0% | |
| TACCCTTTAGTACCATCTAT+TGG | - | chr4.2:17190014-17190033 | None:intergenic | 35.0% | |
| TGCTTCTTCTGGATTATCAA+CGG | - | chr4.2:17190444-17190463 | None:intergenic | 35.0% | |
| TGGACGAAACAAGATACAAA+TGG | - | chr4.2:17192157-17192176 | None:intergenic | 35.0% | |
| TTTAGAGAACCAAACTGTTG+TGG | + | chr4.2:17192611-17192630 | MS.gene028282:intron | 35.0% | |
| TTTGTGCTCTTTCGGTATAT+CGG | + | chr4.2:17191724-17191743 | MS.gene028282:intron | 35.0% | |
| ! | AACCAGATTTAGGACTTGTT+TGG | + | chr4.2:17190932-17190951 | MS.gene028282:intron | 35.0% |
| ! | AAGAAGAATGTGGTTGATTC+GGG | - | chr4.2:17190237-17190256 | None:intergenic | 35.0% |
| ! | AATAAGTTTGTCTGAAACGC+AGG | + | chr4.2:17189600-17189619 | MS.gene028282:intron | 35.0% |
| ! | CTGATTTAAGTTAGGATCTG+CGG | + | chr4.2:17192579-17192598 | MS.gene028282:intron | 35.0% |
| ! | CTTGCTTCAGAAAGTACAAA+AGG | + | chr4.2:17189261-17189280 | MS.gene028282:intron | 35.0% |
| ! | GCATTTTCTATTTCCCTTCA+AGG | - | chr4.2:17192717-17192736 | None:intergenic | 35.0% |
| ! | GGCTCTTTTCAAATCGTTAT+AGG | + | chr4.2:17191516-17191535 | MS.gene028282:intron | 35.0% |
| ! | TGTCTTTTCTTTGCCAAAGT+TGG | + | chr4.2:17190268-17190287 | MS.gene028282:CDS | 35.0% |
| ! | TTGTCTTGTTATCATCATCC+AGG | + | chr4.2:17190406-17190425 | MS.gene028282:intron | 35.0% |
| ! | TTTTCACGGTATCCTTTGTT+GGG | - | chr4.2:17190741-17190760 | None:intergenic | 35.0% |
| ! | TTTTTCACGGTATCCTTTGT+TGG | - | chr4.2:17190742-17190761 | None:intergenic | 35.0% |
| !! | ACATATATGCAAGCATTGGA+CGG | + | chr4.2:17190298-17190317 | MS.gene028282:CDS | 35.0% |
| !! | ATTGATAATGGTAAGTCCGA+AGG | + | chr4.2:17189957-17189976 | MS.gene028282:CDS | 35.0% |
| !! | GCATTTGATGTTGTTGACTT+AGG | - | chr4.2:17189196-17189215 | None:intergenic | 35.0% |
| !! | TATCTTCATGGGCTTTGTTT+GGG | + | chr4.2:17192103-17192122 | MS.gene028282:intron | 35.0% |
| !! | TTATCTTCATGGGCTTTGTT+TGG | + | chr4.2:17192102-17192121 | MS.gene028282:intron | 35.0% |
| !! | TTCCTTTTGAGAAGTCCAAA+GGG | - | chr4.2:17192992-17193011 | None:intergenic | 35.0% |
| !! | TTTCCTTTTGAGAAGTCCAA+AGG | - | chr4.2:17192993-17193012 | None:intergenic | 35.0% |
| !! | TTTGGTGGGTTTATCTTCAT+GGG | + | chr4.2:17192092-17192111 | MS.gene028282:intron | 35.0% |
| !!! | AAGTCTGAGAGTTTTTTGAG+GGG | + | chr4.2:17191820-17191839 | MS.gene028282:intron | 35.0% |
| !!! | GAAGTCTGAGAGTTTTTTGA+GGG | + | chr4.2:17191819-17191838 | MS.gene028282:intron | 35.0% |
| !!! | GCTTTTGTTTTGTGCTCTTT+CGG | + | chr4.2:17191716-17191735 | MS.gene028282:intron | 35.0% |
| !!! | TGAAGTCTGAGAGTTTTTTG+AGG | + | chr4.2:17191818-17191837 | MS.gene028282:intron | 35.0% |
| !!! | TTTGGCTCAAGTTGGTTTTT+GGG | + | chr4.2:17191694-17191713 | MS.gene028282:intron | 35.0% |
| !!! | TTTTGGTGGGTTTATCTTCA+TGG | + | chr4.2:17192091-17192110 | MS.gene028282:intron | 35.0% |
| !!! | TTTTTTGAGGGGTGTTCTTT+GGG | + | chr4.2:17191831-17191850 | MS.gene028282:intron | 35.0% |
| AAAATATGGGATCATGCTGC+TGG | + | chr4.2:17190759-17190778 | MS.gene028282:CDS | 40.0% | |
| AAACACATCACCACCTAAGA+CGG | - | chr4.2:17192074-17192093 | None:intergenic | 40.0% | |
| AACACACTAGCTGAAAGATG+GGG | - | chr4.2:17190851-17190870 | None:intergenic | 40.0% | |
| AACCCTTTGGACTTCTCAAA+AGG | + | chr4.2:17192987-17193006 | MS.gene028282:CDS | 40.0% | |
| AATCTTCCACTGGCAATCAT+TGG | + | chr4.2:17190211-17190230 | MS.gene028282:CDS | 40.0% | |
| ACGAAAGAAACAGTGGATAC+TGG | + | chr4.2:17191343-17191362 | MS.gene028282:intron | 40.0% | |
| AGCTGCATGTTCATTAGGTT+AGG | + | chr4.2:17191765-17191784 | MS.gene028282:intron | 40.0% | |
| ATATGTTCCGTTGCCAACTT+TGG | - | chr4.2:17190284-17190303 | None:intergenic | 40.0% | |
| ATCTAGCAGAGCTAATGCTA+TGG | - | chr4.2:17190155-17190174 | None:intergenic | 40.0% | |
| ATGATTGCCAGTGGAAGATT+TGG | - | chr4.2:17190211-17190230 | None:intergenic | 40.0% | |
| ATTGACAGCCAGGCAAAATA+CGG | + | chr4.2:17190675-17190694 | MS.gene028282:CDS | 40.0% | |
| CATTTGTTTGACAGGTTCAC+AGG | + | chr4.2:17189655-17189674 | MS.gene028282:intron | 40.0% | |
| CCAACTTCAGAAGAAGAATG+TGG | - | chr4.2:17190247-17190266 | None:intergenic | 40.0% | |
| CGGAACATATATGCAAGCAT+TGG | + | chr4.2:17190294-17190313 | MS.gene028282:CDS | 40.0% | |
| GAAAGTTGTATTGGGTGTCT+TGG | + | chr4.2:17190180-17190199 | MS.gene028282:CDS | 40.0% | |
| GAACACACTAGCTGAAAGAT+GGG | - | chr4.2:17190852-17190871 | None:intergenic | 40.0% | |
| GACGATAACGAACCAGATTT+AGG | + | chr4.2:17190922-17190941 | MS.gene028282:intron | 40.0% | |
| GAGCAGAAATTTATGTGGCT+AGG | + | chr4.2:17192778-17192797 | MS.gene028282:intron | 40.0% | |
| GAGCTAATGCTATGGCATAT+TGG | - | chr4.2:17190147-17190166 | None:intergenic | 40.0% | |
| GCACCAGTCCTTAAACATTA+TGG | + | chr4.2:17190610-17190629 | MS.gene028282:intron | 40.0% | |
| TATGGTGTACCGTCTATATG+CGG | + | chr4.2:17192129-17192148 | MS.gene028282:intron | 40.0% | |
| TATTTGCGTTTCCCCAACAA+AGG | + | chr4.2:17190726-17190745 | MS.gene028282:CDS | 40.0% | |
| TGAACACACTAGCTGAAAGA+TGG | - | chr4.2:17190853-17190872 | None:intergenic | 40.0% | |
| TGAATCGACAAAAGGTAGCT+GGG | + | chr4.2:17192550-17192569 | MS.gene028282:intron | 40.0% | |
| TGGCTTCATGAACAGAAACT+CGG | + | chr4.2:17190630-17190649 | MS.gene028282:intron | 40.0% | |
| TTAACTGCTCTCAAAAGCGA+AGG | - | chr4.2:17193065-17193084 | None:intergenic | 40.0% | |
| TTATCGGACAGTGAAACAGA+TGG | + | chr4.2:17191236-17191255 | MS.gene028282:intron | 40.0% | |
| TTCTTTGCCAAAGTTGGCAA+CGG | + | chr4.2:17190274-17190293 | MS.gene028282:CDS | 40.0% | |
| TTTCACGGTATCCTTTGTTG+GGG | - | chr4.2:17190740-17190759 | None:intergenic | 40.0% | |
| TTTCGAATGTGGCTCAGTTT+GGG | + | chr4.2:17191792-17191811 | MS.gene028282:intron | 40.0% | |
| ! | GAATCTAGAGTATGACGTCA+AGG | + | chr4.2:17192241-17192260 | MS.gene028282:intron | 40.0% |
| ! | TTTTCGAATGTGGCTCAGTT+TGG | + | chr4.2:17191791-17191810 | MS.gene028282:intron | 40.0% |
| !! | ATCTTCATGGGCTTTGTTTG+GGG | + | chr4.2:17192104-17192123 | MS.gene028282:intron | 40.0% |
| !! | CATTAGCTCTGCTAGATCAA+GGG | + | chr4.2:17190158-17190177 | MS.gene028282:CDS | 40.0% |
| !! | CCACATTCTTCTTCTGAAGT+TGG | + | chr4.2:17190244-17190263 | MS.gene028282:CDS | 40.0% |
| !! | GTGTTTGTTTCTGTAGGTTG+TGG | + | chr4.2:17191895-17191914 | MS.gene028282:intron | 40.0% |
| !! | TCTTAGGTGGTGATGTGTTT+TGG | + | chr4.2:17192074-17192093 | MS.gene028282:intron | 40.0% |
| !!! | CGGACTTGTTTTTACTGTAC+AGG | - | chr4.2:17192874-17192893 | None:intergenic | 40.0% |
| !!! | CTTTGGCTCAAGTTGGTTTT+TGG | + | chr4.2:17191693-17191712 | MS.gene028282:intron | 40.0% |
| !!! | GTTTTTTGAGGGGTGTTCTT+TGG | + | chr4.2:17191830-17191849 | MS.gene028282:intron | 40.0% |
| !!! | TGGGTTTTGGATCCAATAGA+TGG | + | chr4.2:17189999-17190018 | MS.gene028282:CDS | 40.0% |
| !!! | TTTTTGAGGGGTGTTCTTTG+GGG | + | chr4.2:17191832-17191851 | MS.gene028282:intron | 40.0% |
| ACAGATCGTAATGAGGGAAG+TGG | + | chr4.2:17191268-17191287 | MS.gene028282:intron | 45.0% | |
| ACCACAAAGCCACAACAGTT+TGG | - | chr4.2:17192623-17192642 | None:intergenic | 45.0% | |
| AGACAACAATGGAGGCTGTT+GGG | + | chr4.2:17191178-17191197 | MS.gene028282:intron | 45.0% | |
| AGGGTGACAGATCGTAATGA+GGG | + | chr4.2:17191262-17191281 | MS.gene028282:intron | 45.0% | |
| ATACTGGCAGTGACAGTAGA+AGG | + | chr4.2:17191359-17191378 | MS.gene028282:intron | 45.0% | |
| ATATATAGCCCCATCTCCTC+TGG | - | chr4.2:17190709-17190728 | None:intergenic | 45.0% | |
| CAACGGTACTAACATTCACC+TGG | - | chr4.2:17190427-17190446 | None:intergenic | 45.0% | |
| CCATAATCAGCAACAGTGAC+AGG | - | chr4.2:17189328-17189347 | None:intergenic | 45.0% | |
| CTGAATCGACAAAAGGTAGC+TGG | + | chr4.2:17192549-17192568 | MS.gene028282:intron | 45.0% | |
| GGACGGTTCTACACAAACTA+AGG | + | chr4.2:17190315-17190334 | MS.gene028282:CDS | 45.0% | |
| GTGGAAGCTGCATGTTCATT+AGG | + | chr4.2:17191760-17191779 | MS.gene028282:intron | 45.0% | |
| TAATGCGCTTCAACGTATCC+TGG | - | chr4.2:17189857-17189876 | None:intergenic | 45.0% | |
| TAGCTGAAAGATGGGGTGAA+AGG | - | chr4.2:17190844-17190863 | None:intergenic | 45.0% | |
| TCCTCGGCCACTAATGAAAA+TGG | - | chr4.2:17189722-17189741 | None:intergenic | 45.0% | |
| TGAGAAGTCCAAAGGGTTTC+CGG | - | chr4.2:17192985-17193004 | None:intergenic | 45.0% | |
| TGTACTTCTACAGAAGCTGG+AGG | + | chr4.2:17192942-17192961 | MS.gene028282:intron | 45.0% | |
| TTTCAGTGGCTGTGTTATCG+CGG | - | chr4.2:17191395-17191414 | None:intergenic | 45.0% | |
| TTTGACAGGTTCACAGGTCT+TGG | + | chr4.2:17189661-17189680 | MS.gene028282:intron | 45.0% | |
| ! | AAGGTCTGAGGTTCAAACCT+CGG | - | chr4.2:17189495-17189514 | None:intergenic | 45.0% |
| ! | ACCAAACTGTTGTGGCTTTG+TGG | + | chr4.2:17192619-17192638 | MS.gene028282:intron | 45.0% |
| ! | ACCATTTTCATTAGTGGCCG+AGG | + | chr4.2:17189718-17189737 | MS.gene028282:CDS | 45.0% |
| ! | ATGGTAGTGACTAGTGATGG+AGG | + | chr4.2:17191310-17191329 | MS.gene028282:intron | 45.0% |
| ! | ATTTTCATTAGTGGCCGAGG+AGG | + | chr4.2:17189721-17189740 | MS.gene028282:CDS | 45.0% |
| ! | CCTGTCACTGTTGCTGATTA+TGG | + | chr4.2:17189325-17189344 | MS.gene028282:CDS | 45.0% |
| ! | GATAATGGTAAGTCCGAAGG+TGG | + | chr4.2:17189960-17189979 | MS.gene028282:CDS | 45.0% |
| ! | GGTTAGGAGCTTTTCGAATG+TGG | + | chr4.2:17191781-17191800 | MS.gene028282:intron | 45.0% |
| ! | GTGATGGTAGTGACTAGTGA+TGG | + | chr4.2:17191307-17191326 | MS.gene028282:intron | 45.0% |
| ! | GTTTGTCTGAAACGCAGGTT+TGG | + | chr4.2:17189605-17189624 | MS.gene028282:intron | 45.0% |
| ! | TCTGTTAAGGTGTCCGTCTT+AGG | + | chr4.2:17192058-17192077 | MS.gene028282:intron | 45.0% |
| ! | TGAGCTTAGCTCAGTTGGTA+GGG | - | chr4.2:17189536-17189555 | None:intergenic | 45.0% |
| ! | TGGTAGTGACTAGTGATGGA+GGG | + | chr4.2:17191311-17191330 | MS.gene028282:intron | 45.0% |
| !! | AAAGCGAAGGCATCAAGTTC+TGG | - | chr4.2:17193052-17193071 | None:intergenic | 45.0% |
| !! | ACAGTGAAACAGATGGTGGA+GGG | + | chr4.2:17191243-17191262 | MS.gene028282:intron | 45.0% |
| !! | CAAATGGTGCCGCATATAGA+CGG | - | chr4.2:17192141-17192160 | None:intergenic | 45.0% |
| !! | CAGTGACAGTAGAAGGTGTT+GGG | + | chr4.2:17191366-17191385 | MS.gene028282:intron | 45.0% |
| !! | GCATTAGCTCTGCTAGATCA+AGG | + | chr4.2:17190157-17190176 | MS.gene028282:CDS | 45.0% |
| !! | GCGGAAATGGTGGATGTTAT+CGG | + | chr4.2:17191220-17191239 | MS.gene028282:intron | 45.0% |
| !! | TAGGTGGTGATGTGTTTTGG+TGG | + | chr4.2:17192077-17192096 | MS.gene028282:intron | 45.0% |
| !!! | AGGTGGTGATGTGTTTTGGT+GGG | + | chr4.2:17192078-17192097 | MS.gene028282:intron | 45.0% |
| !! | AAGTAAAAAAAAAAAAAAAA+TGG | - | chr4.2:17190568-17190587 | None:intergenic | 5.0% |
| !!! | ATTTTATTATTAATCTTTTT+TGG | + | chr4.2:17189223-17189242 | MS.gene028282:intron | 5.0% |
| AAATACGGAGCTCTGTCCAG+AGG | + | chr4.2:17190690-17190709 | MS.gene028282:CDS | 50.0% | |
| AACAACGGACGACGTGCTTA+AGG | + | chr4.2:17189932-17189951 | MS.gene028282:CDS | 50.0% | |
| ATTACCGGGAGTCAGCTCTT+TGG | + | chr4.2:17191676-17191695 | MS.gene028282:intron | 50.0% | |
| CCAGGCAACGAAAGAAACAG+TGG | + | chr4.2:17191336-17191355 | MS.gene028282:intron | 50.0% | |
| GAGACAACAATGGAGGCTGT+TGG | + | chr4.2:17191177-17191196 | MS.gene028282:intron | 50.0% | |
| GAGGGTGACAGATCGTAATG+AGG | + | chr4.2:17191261-17191280 | MS.gene028282:intron | 50.0% | |
| GATCGTAATGAGGGAAGTGG+TGG | + | chr4.2:17191271-17191290 | MS.gene028282:intron | 50.0% | |
| GCTGGCTGTATTGTTGTGAG+TGG | + | chr4.2:17190777-17190796 | MS.gene028282:CDS | 50.0% | |
| GGAAGTCGAGACAACAATGG+AGG | + | chr4.2:17191170-17191189 | MS.gene028282:intron | 50.0% | |
| GGATTCAGGGGATCTTCGTA+AGG | + | chr4.2:17189824-17189843 | MS.gene028282:intron | 50.0% | |
| GGCTTGTCCAAATCTTCCAC+TGG | + | chr4.2:17190201-17190220 | MS.gene028282:CDS | 50.0% | |
| GGGGATCTTCGTAAGGAAAG+TGG | + | chr4.2:17189831-17189850 | MS.gene028282:CDS | 50.0% | |
| GGTATTGTCTCAGATGCTGC+CGG | + | chr4.2:17192963-17192982 | MS.gene028282:CDS | 50.0% | |
| GGTGGAAGTCGAGACAACAA+TGG | + | chr4.2:17191167-17191186 | MS.gene028282:intron | 50.0% | |
| GTGAGCTTAGCTCAGTTGGT+AGG | - | chr4.2:17189537-17189556 | None:intergenic | 50.0% | |
| GTGCTCTTTCGGTATATCGG+AGG | + | chr4.2:17191727-17191746 | MS.gene028282:intron | 50.0% | |
| TCGGACAGTGAAACAGATGG+TGG | + | chr4.2:17191239-17191258 | MS.gene028282:intron | 50.0% | |
| TCTTCGTAAGGAAAGTGGCC+AGG | + | chr4.2:17189836-17189855 | MS.gene028282:CDS | 50.0% | |
| TGGCTGTCAATTCTGACTGG+CGG | - | chr4.2:17190666-17190685 | None:intergenic | 50.0% | |
| TTGGGGTGAGTAGTGACGAT+GGG | + | chr4.2:17191849-17191868 | MS.gene028282:intron | 50.0% | |
| TTGTTGTCTCGACTTCCACC+AGG | - | chr4.2:17191167-17191186 | None:intergenic | 50.0% | |
| ! | ACAGAGCTCCGTATTTTGCC+TGG | - | chr4.2:17190686-17190705 | None:intergenic | 50.0% |
| ! | CCACTGTTTCTTTCGTTGCC+TGG | - | chr4.2:17191339-17191358 | None:intergenic | 50.0% |
| ! | CTGGAGCTAGTTTAGTGCCT+TGG | + | chr4.2:17192660-17192679 | MS.gene028282:intron | 50.0% |
| ! | GACAGTGAAACAGATGGTGG+AGG | + | chr4.2:17191242-17191261 | MS.gene028282:intron | 50.0% |
| ! | GCAGTGACAGTAGAAGGTGT+TGG | + | chr4.2:17191365-17191384 | MS.gene028282:intron | 50.0% |
| ! | GTCAGCTCTTTGGCTCAAGT+TGG | + | chr4.2:17191686-17191705 | MS.gene028282:intron | 50.0% |
| ! | GTTAAGGTGTCCGTCTTAGG+TGG | + | chr4.2:17192061-17192080 | MS.gene028282:intron | 50.0% |
| ! | TTTGGGGTGAGTAGTGACGA+TGG | + | chr4.2:17191848-17191867 | MS.gene028282:intron | 50.0% |
| !! | CAAAACCCAGTGTCGACCAA+CGG | - | chr4.2:17189988-17190007 | None:intergenic | 50.0% |
| !! | TGGAGAGTGTTGGGAAGTGA+TGG | + | chr4.2:17191291-17191310 | MS.gene028282:intron | 50.0% |
| !! | TGGGCTTTGTTTGGGGCTTA+TGG | + | chr4.2:17192111-17192130 | MS.gene028282:intron | 50.0% |
| !!! | TTTTTTTTGGGTGGTGGCCG+AGG | + | chr4.2:17189475-17189494 | MS.gene028282:intron | 50.0% |
| AAGTCCGAAGGTGGTTCCGT+TGG | + | chr4.2:17189969-17189988 | MS.gene028282:CDS | 55.0% | |
| AGATGCTGCCGGAAACCCTT+TGG | + | chr4.2:17192974-17192993 | MS.gene028282:CDS | 55.0% | |
| AGCTCTGTCCAGAGGAGATG+GGG | + | chr4.2:17190698-17190717 | MS.gene028282:CDS | 55.0% | |
| ATGGACGGTGACAGCAGCAA+TGG | + | chr4.2:17191132-17191151 | MS.gene028282:intron | 55.0% | |
| CCAACTGAGCTAAGCTCACG+AGG | + | chr4.2:17189538-17189557 | MS.gene028282:intron | 55.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | - | chr4.2:17189541-17189560 | None:intergenic | 55.0% | |
| GAGCTCTGTCCAGAGGAGAT+GGG | + | chr4.2:17190697-17190716 | MS.gene028282:CDS | 55.0% | |
| GCCAGTCAGAATTGACAGCC+AGG | + | chr4.2:17190665-17190684 | MS.gene028282:CDS | 55.0% | |
| GCCTGGCTGTCAATTCTGAC+TGG | - | chr4.2:17190669-17190688 | None:intergenic | 55.0% | |
| GTAGTGACGATGGGTGGTTG+TGG | + | chr4.2:17191858-17191877 | MS.gene028282:intron | 55.0% | |
| GTGACAGCAGCAATGGTGAG+TGG | + | chr4.2:17191139-17191158 | MS.gene028282:intron | 55.0% | |
| TACCTTGCGTCTTGCGAGGA+TGG | + | chr4.2:17192177-17192196 | MS.gene028282:intron | 55.0% | |
| TATCGGAGGTCGAGAGGTTG+TGG | + | chr4.2:17191741-17191760 | MS.gene028282:intron | 55.0% | |
| TCCATACCTTGCGTCTTGCG+AGG | + | chr4.2:17192173-17192192 | MS.gene028282:intron | 55.0% | |
| TCCTCGCAAGACGCAAGGTA+TGG | - | chr4.2:17192177-17192196 | None:intergenic | 55.0% | |
| TCGACCAACGGAACCACCTT+CGG | - | chr4.2:17189976-17189995 | None:intergenic | 55.0% | |
| TCGGTATATCGGAGGTCGAG+AGG | + | chr4.2:17191735-17191754 | MS.gene028282:intron | 55.0% | |
| TGGTCATAATGCAACGGCCG+AGG | - | chr4.2:17190385-17190404 | None:intergenic | 55.0% | |
| TGGTTCCGTTGGTCGACACT+GGG | + | chr4.2:17189980-17189999 | MS.gene028282:CDS | 55.0% | |
| TGTTGGGCAGCAGAGGTTGT+CGG | + | chr4.2:17191194-17191213 | MS.gene028282:intron | 55.0% | |
| TTCGGGCCAATGATTGCCAG+TGG | - | chr4.2:17190220-17190239 | None:intergenic | 55.0% | |
| ! | AGGGAAGTGGTGGAGAGTGT+TGG | + | chr4.2:17191281-17191300 | MS.gene028282:intron | 55.0% |
| ! | CGTTGGTCGACACTGGGTTT+TGG | + | chr4.2:17189986-17190005 | MS.gene028282:CDS | 55.0% |
| ! | TGAGCCAAAGAGCTGACTCC+CGG | - | chr4.2:17191683-17191702 | None:intergenic | 55.0% |
| !! | GGGAAGTGGTGGAGAGTGTT+GGG | + | chr4.2:17191282-17191301 | MS.gene028282:intron | 55.0% |
| ACAGAGACGAGCAGCGAGAG+TGG | - | chr4.2:17189157-17189176 | None:intergenic | 60.0% | |
| CAATGGTGAGTGGTGCCTGG+TGG | + | chr4.2:17191149-17191168 | MS.gene028282:intron | 60.0% | |
| CAGCAATGGTGAGTGGTGCC+TGG | + | chr4.2:17191146-17191165 | MS.gene028282:intron | 60.0% | |
| GGAGCTCTGTCCAGAGGAGA+TGG | + | chr4.2:17190696-17190715 | MS.gene028282:CDS | 60.0% | |
| GGGTGAGTAGTGACGATGGG+TGG | + | chr4.2:17191852-17191871 | MS.gene028282:intron | 60.0% | |
| GTGGTTCCGTTGGTCGACAC+TGG | + | chr4.2:17189979-17189998 | MS.gene028282:CDS | 60.0% | |
| GTTGGGCAGCAGAGGTTGTC+GGG | + | chr4.2:17191195-17191214 | MS.gene028282:intron | 60.0% | |
| TCTCGCTGCTCGTCTCTGTC+AGG | + | chr4.2:17189158-17189177 | MS.gene028282:CDS | 60.0% | |
| !! | AGGTTGTCGGGTGGCGGAAA+TGG | + | chr4.2:17191207-17191226 | MS.gene028282:intron | 60.0% |
| !! | GACTAGTGATGGAGGGTGCC+AGG | + | chr4.2:17191318-17191337 | MS.gene028282:intron | 60.0% |
| !! | TTGTCGGGTGGCGGAAATGG+TGG | + | chr4.2:17191210-17191229 | MS.gene028282:intron | 60.0% |
| CAGCAGAGGTTGTCGGGTGG+CGG | + | chr4.2:17191201-17191220 | MS.gene028282:intron | 65.0% | |
| CGCCATCCTCGCAAGACGCA+AGG | - | chr4.2:17192182-17192201 | None:intergenic | 65.0% | |
| TGGAGGCTGTTGGGCAGCAG+AGG | + | chr4.2:17191187-17191206 | MS.gene028282:intron | 65.0% | |
| GGGCAGCAGAGGTTGTCGGG+TGG | + | chr4.2:17191198-17191217 | MS.gene028282:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 17189111 | 17193118 | 17189111 | ID=MS.gene028282 |
| chr4.2 | mRNA | 17189111 | 17193118 | 17189111 | ID=MS.gene028282.t1;Parent=MS.gene028282 |
| chr4.2 | exon | 17189111 | 17189183 | 17189111 | ID=MS.gene028282.t1.exon1;Parent=MS.gene028282.t1 |
| chr4.2 | CDS | 17189111 | 17189183 | 17189111 | ID=cds.MS.gene028282.t1;Parent=MS.gene028282.t1 |
| chr4.2 | exon | 17189275 | 17189346 | 17189275 | ID=MS.gene028282.t1.exon2;Parent=MS.gene028282.t1 |
| chr4.2 | CDS | 17189275 | 17189346 | 17189275 | ID=cds.MS.gene028282.t1;Parent=MS.gene028282.t1 |
| chr4.2 | exon | 17189669 | 17189742 | 17189669 | ID=MS.gene028282.t1.exon3;Parent=MS.gene028282.t1 |
| chr4.2 | CDS | 17189669 | 17189742 | 17189669 | ID=cds.MS.gene028282.t1;Parent=MS.gene028282.t1 |
| chr4.2 | exon | 17189825 | 17190030 | 17189825 | ID=MS.gene028282.t1.exon4;Parent=MS.gene028282.t1 |
| chr4.2 | CDS | 17189825 | 17190030 | 17189825 | ID=cds.MS.gene028282.t1;Parent=MS.gene028282.t1 |
| chr4.2 | exon | 17190129 | 17190336 | 17190129 | ID=MS.gene028282.t1.exon5;Parent=MS.gene028282.t1 |
| chr4.2 | CDS | 17190129 | 17190336 | 17190129 | ID=cds.MS.gene028282.t1;Parent=MS.gene028282.t1 |
| chr4.2 | exon | 17190428 | 17190526 | 17190428 | ID=MS.gene028282.t1.exon6;Parent=MS.gene028282.t1 |
| chr4.2 | CDS | 17190428 | 17190526 | 17190428 | ID=cds.MS.gene028282.t1;Parent=MS.gene028282.t1 |
| chr4.2 | exon | 17190645 | 17190798 | 17190645 | ID=MS.gene028282.t1.exon7;Parent=MS.gene028282.t1 |
| chr4.2 | CDS | 17190645 | 17190798 | 17190645 | ID=cds.MS.gene028282.t1;Parent=MS.gene028282.t1 |
| chr4.2 | exon | 17192955 | 17193118 | 17192955 | ID=MS.gene028282.t1.exon8;Parent=MS.gene028282.t1 |
| chr4.2 | CDS | 17192955 | 17193118 | 17192955 | ID=cds.MS.gene028282.t1;Parent=MS.gene028282.t1 |
| Gene Sequence |
| Protein sequence |
