Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene029108.t1 | XP_013470468.1 | 97.8 | 314 | 7 | 0 | 1 | 314 | 1 | 314 | 4.00E-177 | 630.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene029108.t1 | Q9C942 | 36.4 | 280 | 176 | 2 | 21 | 298 | 50 | 329 | 8.8e-48 | 192.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene029108.t1 | A0A072VS52 | 97.8 | 314 | 7 | 0 | 1 | 314 | 1 | 314 | 2.9e-177 | 630.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene029108 | MS.gene92221 | PPI |
MS.gene029108 | MS.gene90834 | PPI |
MS.gene029108 | MS.gene32176 | PPI |
MS.gene029108 | MS.gene066454 | PPI |
MS.gene029108 | MS.gene052529 | PPI |
MS.gene54469 | MS.gene029108 | PPI |
MS.gene029108 | MS.gene39411 | PPI |
MS.gene90834 | MS.gene029108 | PPI |
MS.gene029108 | MS.gene80965 | PPI |
MS.gene029108 | MS.gene33751 | PPI |
MS.gene029108 | MS.gene75172 | PPI |
MS.gene029108 | MS.gene76909 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene029108.t1 | MTR_1g115535 | 97.771 | 314 | 7 | 0 | 1 | 314 | 1 | 314 | 0.0 | 645 |
MS.gene029108.t1 | MTR_1g115535 | 97.764 | 313 | 7 | 0 | 2 | 314 | 6 | 318 | 0.0 | 642 |
MS.gene029108.t1 | MTR_1g088470 | 52.881 | 295 | 138 | 1 | 8 | 302 | 6 | 299 | 2.84e-121 | 351 |
MS.gene029108.t1 | MTR_7g108770 | 51.370 | 292 | 141 | 1 | 4 | 295 | 2 | 292 | 6.54e-115 | 335 |
MS.gene029108.t1 | MTR_6g025610 | 47.260 | 292 | 154 | 0 | 7 | 298 | 41 | 332 | 2.20e-94 | 283 |
MS.gene029108.t1 | MTR_6g018490 | 46.918 | 292 | 155 | 0 | 7 | 298 | 51 | 342 | 3.80e-94 | 283 |
MS.gene029108.t1 | MTR_5g056550 | 46.528 | 288 | 153 | 1 | 7 | 293 | 104 | 391 | 5.31e-91 | 276 |
MS.gene029108.t1 | MTR_7g007260 | 45.455 | 286 | 156 | 0 | 7 | 292 | 52 | 337 | 2.71e-87 | 265 |
MS.gene029108.t1 | MTR_1g110670 | 43.369 | 279 | 157 | 1 | 16 | 293 | 79 | 357 | 7.95e-84 | 257 |
MS.gene029108.t1 | MTR_6g084420 | 42.321 | 293 | 168 | 1 | 7 | 298 | 51 | 343 | 9.83e-83 | 254 |
MS.gene029108.t1 | MTR_4g089170 | 42.321 | 293 | 168 | 1 | 4 | 295 | 33 | 325 | 9.56e-78 | 240 |
MS.gene029108.t1 | MTR_7g007260 | 42.308 | 286 | 152 | 1 | 7 | 292 | 52 | 324 | 2.24e-75 | 234 |
MS.gene029108.t1 | MTR_5g056550 | 42.014 | 288 | 133 | 2 | 7 | 293 | 104 | 358 | 7.35e-75 | 234 |
MS.gene029108.t1 | MTR_7g007260 | 42.160 | 287 | 152 | 2 | 7 | 292 | 52 | 325 | 5.50e-74 | 231 |
MS.gene029108.t1 | MTR_1g095110 | 38.776 | 294 | 171 | 6 | 7 | 295 | 28 | 317 | 3.02e-63 | 203 |
MS.gene029108.t1 | MTR_4g127220 | 36.918 | 279 | 174 | 2 | 21 | 297 | 41 | 319 | 6.12e-58 | 189 |
MS.gene029108.t1 | MTR_5g056550 | 44.056 | 143 | 79 | 1 | 7 | 148 | 104 | 246 | 6.96e-39 | 139 |
MS.gene029108.t1 | MTR_5g056550 | 44.366 | 142 | 78 | 1 | 7 | 147 | 104 | 245 | 1.94e-38 | 137 |
MS.gene029108.t1 | MTR_6g071475 | 31.071 | 280 | 182 | 6 | 16 | 293 | 120 | 390 | 1.60e-32 | 124 |
MS.gene029108.t1 | MTR_3g109870 | 28.374 | 289 | 177 | 9 | 8 | 293 | 93 | 354 | 5.11e-24 | 100 |
MS.gene029108.t1 | MTR_1g110680 | 42.553 | 94 | 50 | 2 | 200 | 293 | 15 | 104 | 1.45e-14 | 68.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene029108.t1 | AT2G39420 | 64.650 | 314 | 110 | 1 | 1 | 313 | 1 | 314 | 7.87e-160 | 449 |
MS.gene029108.t1 | AT2G39410 | 61.415 | 311 | 119 | 1 | 1 | 310 | 1 | 311 | 2.66e-154 | 434 |
MS.gene029108.t1 | AT2G39400 | 62.171 | 304 | 115 | 0 | 7 | 310 | 2 | 305 | 2.83e-149 | 422 |
MS.gene029108.t1 | AT3G55180 | 60.984 | 305 | 118 | 1 | 7 | 310 | 2 | 306 | 1.24e-145 | 412 |
MS.gene029108.t1 | AT3G55190 | 55.208 | 288 | 128 | 1 | 7 | 293 | 8 | 295 | 2.46e-122 | 353 |
MS.gene029108.t1 | AT3G62860 | 52.431 | 288 | 136 | 1 | 7 | 294 | 6 | 292 | 1.71e-119 | 347 |
MS.gene029108.t1 | AT2G47630 | 51.546 | 291 | 140 | 1 | 5 | 294 | 4 | 294 | 1.17e-118 | 345 |
MS.gene029108.t1 | AT2G39400 | 62.667 | 225 | 83 | 1 | 7 | 231 | 2 | 225 | 1.24e-106 | 311 |
MS.gene029108.t1 | AT3G62860 | 53.414 | 249 | 116 | 0 | 46 | 294 | 1 | 249 | 1.75e-102 | 303 |
MS.gene029108.t1 | AT2G47630 | 51.807 | 249 | 120 | 0 | 46 | 294 | 1 | 249 | 7.41e-100 | 296 |
MS.gene029108.t1 | AT2G47630 | 50.196 | 255 | 120 | 1 | 40 | 294 | 22 | 269 | 1.71e-97 | 291 |
MS.gene029108.t1 | AT5G16120 | 45.361 | 291 | 159 | 0 | 4 | 294 | 50 | 340 | 1.72e-91 | 276 |
MS.gene029108.t1 | AT5G16120 | 45.361 | 291 | 159 | 0 | 4 | 294 | 50 | 340 | 1.72e-91 | 276 |
MS.gene029108.t1 | AT5G16120 | 45.361 | 291 | 159 | 0 | 4 | 294 | 82 | 372 | 3.40e-91 | 276 |
MS.gene029108.t1 | AT5G16120 | 45.361 | 291 | 159 | 0 | 4 | 294 | 68 | 358 | 4.78e-91 | 276 |
MS.gene029108.t1 | AT1G11090 | 45.390 | 282 | 153 | 1 | 13 | 293 | 33 | 314 | 5.41e-83 | 254 |
MS.gene029108.t1 | AT1G77420 | 42.361 | 288 | 165 | 1 | 7 | 293 | 91 | 378 | 2.62e-80 | 249 |
MS.gene029108.t1 | AT5G14980 | 37.755 | 294 | 181 | 2 | 3 | 295 | 25 | 317 | 1.24e-70 | 222 |
MS.gene029108.t1 | AT5G19290 | 34.364 | 291 | 188 | 3 | 7 | 295 | 29 | 318 | 3.21e-59 | 193 |
MS.gene029108.t1 | AT1G52760 | 37.011 | 281 | 173 | 4 | 21 | 298 | 50 | 329 | 1.70e-57 | 188 |
MS.gene029108.t1 | AT2G39410 | 61.165 | 103 | 39 | 1 | 1 | 102 | 1 | 103 | 1.34e-43 | 145 |
MS.gene029108.t1 | AT1G73480 | 34.875 | 281 | 166 | 8 | 18 | 293 | 194 | 462 | 9.17e-41 | 148 |
MS.gene029108.t1 | AT1G18360 | 32.302 | 291 | 177 | 10 | 11 | 293 | 103 | 381 | 1.07e-34 | 130 |
MS.gene029108.t1 | AT5G11650 | 32.500 | 280 | 174 | 8 | 18 | 293 | 110 | 378 | 4.73e-34 | 128 |
Find 62 sgRNAs with CRISPR-Local
Find 379 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATATTGGGACGGTGCTATTT+TGG | 0.211717 | 1.3:+78741564 | MS.gene029108:CDS |
CACATGAAGATTAATGCTTT+TGG | 0.262833 | 1.3:-78740945 | None:intergenic |
TGGTGAGCCACCAGAAAATT+TGG | 0.292885 | 1.3:+78746802 | MS.gene029108:CDS |
TACCACATATGCTGCTAAAA+TGG | 0.299979 | 1.3:-78741230 | None:intergenic |
AAGAAGATGAGGTATTTGTT+AGG | 0.361063 | 1.3:+78741490 | MS.gene029108:CDS |
ATGCAACGTCAATGATATCT+TGG | 0.366862 | 1.3:-78746369 | None:intergenic |
ATAGCACCGTCCCAATATTC+TGG | 0.371738 | 1.3:-78741559 | None:intergenic |
TATACCTGTTGTCTGACTTC+GGG | 0.372481 | 1.3:-78746400 | None:intergenic |
GAAGGACATGGAAAATCATA+TGG | 0.374514 | 1.3:+78741156 | MS.gene029108:CDS |
CTCATCTTCTTCTTATTCTC+CGG | 0.389076 | 1.3:-78741478 | None:intergenic |
AATGGTGGATATGCAGTATA+TGG | 0.394585 | 1.3:+78741123 | MS.gene029108:CDS |
GGTAAACCTCGTTTGAGAAC+AGG | 0.406676 | 1.3:+78746590 | MS.gene029108:CDS |
ATACGCATCACAAATGCGTT+TGG | 0.426579 | 1.3:-78746298 | None:intergenic |
AATAAACCATGCCACATTCC+AGG | 0.432223 | 1.3:-78746776 | None:intergenic |
GAACAGGTTATGAACTTAGC+AGG | 0.442798 | 1.3:+78746606 | MS.gene029108:CDS |
TTCGTTTGCAGGAATCCAAC+TGG | 0.447472 | 1.3:-78740919 | None:intergenic |
ATATACCTGTTGTCTGACTT+CGG | 0.460427 | 1.3:-78746401 | None:intergenic |
ATGTGGCATGGTTTATTGTA+TGG | 0.464306 | 1.3:+78746782 | MS.gene029108:CDS |
GTATTTGTTAGGAGAATCAA+TGG | 0.473307 | 1.3:+78741501 | MS.gene029108:CDS |
CAGGGTTGCTACACAAATTG+AGG | 0.478781 | 1.3:+78746625 | MS.gene029108:CDS |
CGTCAATGATATCTTGGGTT+GGG | 0.478954 | 1.3:-78746363 | None:intergenic |
ATTAAATTACTTACTGTCCA+TGG | 0.494516 | 1.3:-78740997 | None:intergenic |
GTCTCTGATTCTGATTACTT+AGG | 0.494953 | 1.3:-78746923 | None:intergenic |
TGTAATTGTTTGCTCACTGA+TGG | 0.495340 | 1.3:-78746713 | None:intergenic |
CATGGTGATGCTGCATTCCA+TGG | 0.495721 | 1.3:-78740979 | None:intergenic |
ATAGAGGAAAGATCTCAATA+TGG | 0.496875 | 1.3:+78746854 | MS.gene029108:CDS |
GTTGGGACTATTTGCCATGT+GGG | 0.500420 | 1.3:-78746346 | None:intergenic |
TTCACGAGGAATGAAGCTAT+TGG | 0.503313 | 1.3:+78740893 | MS.gene029108:CDS |
GCAAATCAATACTGCTTCAA+AGG | 0.506460 | 1.3:+78746569 | MS.gene029108:CDS |
AGTCCCCGAAGTCAGACAAC+AGG | 0.533737 | 1.3:+78746396 | MS.gene029108:CDS |
GCATTAATCTTCATGTGTCA+TGG | 0.535158 | 1.3:+78740951 | MS.gene029108:CDS |
ATAAACCATGCCACATTCCA+GGG | 0.536826 | 1.3:-78746775 | None:intergenic |
GGAAAATCATATGGGTTACC+TGG | 0.550368 | 1.3:+78741165 | MS.gene029108:CDS |
TGAAGCTATTGGCAACCAGT+TGG | 0.556889 | 1.3:+78740904 | MS.gene029108:CDS |
GAGCAAACAATTACATGAAG+TGG | 0.559648 | 1.3:+78746721 | MS.gene029108:CDS |
TTTGGCTGCACCAATGTGCA+AGG | 0.567302 | 1.3:+78741582 | MS.gene029108:CDS |
TGCAACGTCAATGATATCTT+GGG | 0.571424 | 1.3:-78746368 | None:intergenic |
CGGAGAATAAGAAGAAGATG+AGG | 0.571485 | 1.3:+78741479 | MS.gene029108:CDS |
GGTTGGGACTATTTGCCATG+TGG | 0.578579 | 1.3:-78746347 | None:intergenic |
ACGTCAATGATATCTTGGGT+TGG | 0.580610 | 1.3:-78746364 | None:intergenic |
TGAAATTATACCCTGGAATG+TGG | 0.585853 | 1.3:+78746765 | MS.gene029108:CDS |
ACTGCAAGAAGACTAGCAAA+TGG | 0.585870 | 1.3:+78741105 | MS.gene029108:CDS |
AGAATCAATGGGAGGAGCTG+TGG | 0.588110 | 1.3:+78741513 | MS.gene029108:CDS |
TCAAAATTCTTAACAAGACC+AGG | 0.588245 | 1.3:-78741183 | None:intergenic |
TTATACCCTGGAATGTGGCA+TGG | 0.590145 | 1.3:+78746770 | MS.gene029108:CDS |
AACAGGTTATGAACTTAGCA+GGG | 0.592891 | 1.3:+78746607 | MS.gene029108:CDS |
ATACCTGTTGTCTGACTTCG+GGG | 0.600788 | 1.3:-78746399 | None:intergenic |
TATTTGTTAGGAGAATCAAT+GGG | 0.610159 | 1.3:+78741502 | MS.gene029108:CDS |
AAGGACATGGAAAATCATAT+GGG | 0.610292 | 1.3:+78741157 | MS.gene029108:CDS |
CACATATGCTGCTAAAATGG+CGG | 0.616640 | 1.3:-78741227 | None:intergenic |
GTATATGGTATAGATTATGA+AGG | 0.621762 | 1.3:+78741138 | MS.gene029108:CDS |
GCAAAGCTAACCTTGCACAT+TGG | 0.625763 | 1.3:-78741592 | None:intergenic |
GGTATAGATTATGAAGGACA+TGG | 0.626273 | 1.3:+78741144 | MS.gene029108:CDS |
AACTGACATCAAATACGAAG+AGG | 0.629312 | 1.3:+78740693 | MS.gene029108:CDS |
TCATAACCTGTTCTCAAACG+AGG | 0.632056 | 1.3:-78746596 | None:intergenic |
TAAGCAAAGTTGCTCCCACA+TGG | 0.635188 | 1.3:+78746332 | MS.gene029108:CDS |
GCAAGAAGACTAGCAAATGG+TGG | 0.646499 | 1.3:+78741108 | MS.gene029108:CDS |
CATGGAATGCAGCATCACCA+TGG | 0.662101 | 1.3:+78740980 | MS.gene029108:CDS |
TTGTTAGGAGAATCAATGGG+AGG | 0.667244 | 1.3:+78741505 | MS.gene029108:CDS |
CATGTGTCATGGATATGCCA+TGG | 0.671110 | 1.3:+78740962 | MS.gene029108:CDS |
AAGACACTGAAATTATACCC+TGG | 0.682010 | 1.3:+78746758 | MS.gene029108:CDS |
GATTTCGTATTGAATTCACG+AGG | 0.718373 | 1.3:+78740879 | MS.gene029108:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAATTATTACCATTATT+TGG | + | chr1.3:78745463-78745482 | MS.gene029108:intron | 10.0% |
!! | AATGTATCTTATTATAAATA+TGG | + | chr1.3:78743550-78743569 | MS.gene029108:intron | 10.0% |
!! | AATTGAATGAATTATTATAT+AGG | + | chr1.3:78741081-78741100 | MS.gene029108:intron | 10.0% |
!! | ATTATTAGATAATAATGTTT+GGG | - | chr1.3:78741828-78741847 | None:intergenic | 10.0% |
!! | CAATAATCATAATAAAAAAA+AGG | + | chr1.3:78745086-78745105 | MS.gene029108:intron | 10.0% |
!! | CTAAAAGTTTATATATAAAT+GGG | - | chr1.3:78744566-78744585 | None:intergenic | 10.0% |
!! | CTTAAAAGAAATTATTAAAT+AGG | + | chr1.3:78743105-78743124 | MS.gene029108:intron | 10.0% |
!! | TAACATATACATAAAATTTA+GGG | + | chr1.3:78745858-78745877 | MS.gene029108:intron | 10.0% |
!! | TAATGATATAAAATTATTTG+TGG | - | chr1.3:78743133-78743152 | None:intergenic | 10.0% |
!! | TTATTTGGATAAAAAAAATA+GGG | - | chr1.3:78745522-78745541 | None:intergenic | 10.0% |
!! | TTGAATGAAATTAATTTATA+GGG | - | chr1.3:78742505-78742524 | None:intergenic | 10.0% |
!!! | AAAAAACTTTTTCATTAAAT+TGG | - | chr1.3:78744622-78744641 | None:intergenic | 10.0% |
!!! | CAATTATTTTTATTCAAAAA+AGG | + | chr1.3:78743430-78743449 | MS.gene029108:intron | 10.0% |
!!! | CAGAATTAATTTTTTTTTTT+TGG | - | chr1.3:78745902-78745921 | None:intergenic | 10.0% |
!!! | CTATTTAATAATTTCTTTTA+AGG | - | chr1.3:78743107-78743126 | None:intergenic | 10.0% |
!!! | GAATTAATTTTTTTTTTTTG+GGG | - | chr1.3:78745900-78745919 | None:intergenic | 10.0% |
!! | AACATATACATAAAATTTAG+GGG | + | chr1.3:78745859-78745878 | MS.gene029108:intron | 15.0% |
!! | AAGAATATCTAAGAAATAAT+AGG | + | chr1.3:78743685-78743704 | MS.gene029108:intron | 15.0% |
!! | AATAAATGAACAGTAAAATA+CGG | - | chr1.3:78743824-78743843 | None:intergenic | 15.0% |
!! | AATGCTATTAAAATTAAGTA+AGG | + | chr1.3:78742431-78742450 | MS.gene029108:intron | 15.0% |
!! | AATGTCTATTATAAAATTAG+AGG | - | chr1.3:78745162-78745181 | None:intergenic | 15.0% |
!! | ACTATCAATACATATAAATT+AGG | + | chr1.3:78741988-78742007 | MS.gene029108:intron | 15.0% |
!! | AGAATATCTAAGAAATAATA+GGG | + | chr1.3:78743686-78743705 | MS.gene029108:intron | 15.0% |
!! | AGATAAAAAGTAATAAAATC+TGG | + | chr1.3:78742239-78742258 | MS.gene029108:intron | 15.0% |
!! | ATGTCTATTATAAAATTAGA+GGG | - | chr1.3:78745161-78745180 | None:intergenic | 15.0% |
!! | CATATAATAAAAGAGAAAAA+AGG | - | chr1.3:78741027-78741046 | None:intergenic | 15.0% |
!! | CCTAAAAGTTTATATATAAA+TGG | - | chr1.3:78744567-78744586 | None:intergenic | 15.0% |
!! | CTATCAATACATATAAATTA+GGG | + | chr1.3:78741989-78742008 | MS.gene029108:intron | 15.0% |
!! | GACATGATTATTAATTTATT+AGG | + | chr1.3:78740829-78740848 | MS.gene029108:intron | 15.0% |
!! | GATTATTAGATAATAATGTT+TGG | - | chr1.3:78741829-78741848 | None:intergenic | 15.0% |
!! | GTAACATATACATAAAATTT+AGG | + | chr1.3:78745857-78745876 | MS.gene029108:intron | 15.0% |
!! | GTTATAGATTTATATATTGA+AGG | + | chr1.3:78746520-78746539 | MS.gene029108:intron | 15.0% |
!! | GTTATTTGGATAAAAAAAAT+AGG | - | chr1.3:78745523-78745542 | None:intergenic | 15.0% |
!! | GTTGAATGAAATTAATTTAT+AGG | - | chr1.3:78742506-78742525 | None:intergenic | 15.0% |
!! | TTTAATGAATAATTTATGCA+TGG | + | chr1.3:78746122-78746141 | MS.gene029108:intron | 15.0% |
!! | TTTATCTTAATCAAAAGAAA+CGG | + | chr1.3:78740797-78740816 | MS.gene029108:intron | 15.0% |
!!! | ATATATTTTAAAAGAACTCA+GGG | - | chr1.3:78745191-78745210 | None:intergenic | 15.0% |
!!! | ATCAATTGTTTCTTATAATA+AGG | + | chr1.3:78743607-78743626 | MS.gene029108:intron | 15.0% |
!!! | CCATTTATATATAAACTTTT+AGG | + | chr1.3:78744564-78744583 | MS.gene029108:intron | 15.0% |
!!! | TATATATTTTAAAAGAACTC+AGG | - | chr1.3:78745192-78745211 | None:intergenic | 15.0% |
!!! | TATTCAAAGACATTTTTAAT+TGG | + | chr1.3:78746831-78746850 | MS.gene029108:CDS | 15.0% |
!!! | TCTTTTATTATATGATATCA+TGG | + | chr1.3:78741033-78741052 | MS.gene029108:intron | 15.0% |
!!! | TTCTGTTTTTTATTTTATTC+AGG | + | chr1.3:78740857-78740876 | MS.gene029108:intron | 15.0% |
!!! | TTTTTTTTATCCAAATAACA+TGG | + | chr1.3:78745524-78745543 | MS.gene029108:intron | 15.0% |
!! | AAAAAAAAAAACAGAAAAGC+CGG | + | chr1.3:78741459-78741478 | MS.gene029108:intron | 20.0% |
!! | AAAAAAGGAACAAATACAAA+GGG | + | chr1.3:78743445-78743464 | MS.gene029108:intron | 20.0% |
!! | AAACAAATTTGAATTGAGTA+GGG | + | chr1.3:78742369-78742388 | MS.gene029108:intron | 20.0% |
!! | AAATAAATAAGCTATGTCAT+GGG | - | chr1.3:78741354-78741373 | None:intergenic | 20.0% |
!! | AACATTAGGAAAACTAATTA+CGG | - | chr1.3:78740634-78740653 | None:intergenic | 20.0% |
!! | ACATGTTACATGTTTATTAT+AGG | + | chr1.3:78740772-78740791 | MS.gene029108:intron | 20.0% |
!! | ACTTTGAGCTAAAAAAAAAA+AGG | + | chr1.3:78742956-78742975 | MS.gene029108:intron | 20.0% |
!! | AGATTATAATCTAATGTCTA+TGG | - | chr1.3:78741874-78741893 | None:intergenic | 20.0% |
!! | AGCAATATAATTCAATTCAA+TGG | + | chr1.3:78744847-78744866 | MS.gene029108:intron | 20.0% |
!! | ATCTTTATGTTTAATTGTGA+TGG | - | chr1.3:78742546-78742565 | None:intergenic | 20.0% |
!! | ATGGTGTTTATTAAGTATTA+CGG | - | chr1.3:78743068-78743087 | None:intergenic | 20.0% |
!! | GATTATTAATTTATTAGGCA+TGG | + | chr1.3:78740834-78740853 | MS.gene029108:intron | 20.0% |
!! | GCATAAAAAGTTGAATTTAA+TGG | - | chr1.3:78741300-78741319 | None:intergenic | 20.0% |
!! | GGAAAAAAATAACAAACATT+AGG | - | chr1.3:78740648-78740667 | None:intergenic | 20.0% |
!! | TAAACAAATTTGAATTGAGT+AGG | + | chr1.3:78742368-78742387 | MS.gene029108:intron | 20.0% |
!! | TATTCTACAAAAAAAGATGT+TGG | - | chr1.3:78740736-78740755 | None:intergenic | 20.0% |
!! | TATTTAACACCACATTAAAT+AGG | - | chr1.3:78743288-78743307 | None:intergenic | 20.0% |
!! | TATTTATGAATTGCAGATTA+GGG | + | chr1.3:78746547-78746566 | MS.gene029108:intron | 20.0% |
!! | TCAAAACAAAAACCAAATAA+TGG | - | chr1.3:78745478-78745497 | None:intergenic | 20.0% |
!! | TCTAACAGAATATTAACTAA+CGG | - | chr1.3:78745237-78745256 | None:intergenic | 20.0% |
!! | TGTCTATTATAAAATTAGAG+GGG | - | chr1.3:78745160-78745179 | None:intergenic | 20.0% |
!! | TTATGTTTAATACAGTTGTT+TGG | + | chr1.3:78746069-78746088 | MS.gene029108:intron | 20.0% |
!! | TTATTTATGAATTGCAGATT+AGG | + | chr1.3:78746546-78746565 | MS.gene029108:intron | 20.0% |
!!! | AATAATTTCTTTTAAGGTGT+TGG | - | chr1.3:78743101-78743120 | None:intergenic | 20.0% |
!!! | AATCAAACTTTGTTTTAACA+GGG | - | chr1.3:78742079-78742098 | None:intergenic | 20.0% |
!!! | AATTTTGCGATAATTTTTTG+CGG | + | chr1.3:78742274-78742293 | MS.gene029108:intron | 20.0% |
!!! | AGATTACTATGCATTTTATA+TGG | - | chr1.3:78744680-78744699 | None:intergenic | 20.0% |
!!! | AGTAGAAGATTAGTATTTTA+TGG | - | chr1.3:78744901-78744920 | None:intergenic | 20.0% |
!!! | ATAATTTCTTTTAAGGTGTT+GGG | - | chr1.3:78743100-78743119 | None:intergenic | 20.0% |
!!! | ATTCTTTTACATTGATTGAT+AGG | - | chr1.3:78743671-78743690 | None:intergenic | 20.0% |
!!! | CACTATTAATACTTTTTTTG+AGG | - | chr1.3:78746480-78746499 | None:intergenic | 20.0% |
!!! | CATATTTAAATTTTGACGTA+AGG | - | chr1.3:78744784-78744803 | None:intergenic | 20.0% |
!!! | GTAGAAGATTAGTATTTTAT+GGG | - | chr1.3:78744900-78744919 | None:intergenic | 20.0% |
!!! | GTCAACTTTTTCTTATAATA+AGG | - | chr1.3:78743508-78743527 | None:intergenic | 20.0% |
!!! | TAAGAAAAAGTTGACTTTTT+AGG | + | chr1.3:78743513-78743532 | MS.gene029108:intron | 20.0% |
!!! | TAATCAAACTTTGTTTTAAC+AGG | - | chr1.3:78742080-78742099 | None:intergenic | 20.0% |
!!! | TATATTTTAAAAGAACTCAG+GGG | - | chr1.3:78745190-78745209 | None:intergenic | 20.0% |
!!! | TATTTAATGTGGTGTTAAAT+AGG | + | chr1.3:78743287-78743306 | MS.gene029108:intron | 20.0% |
!!! | TCAACTATAGATTTGAAATA+AGG | - | chr1.3:78745365-78745384 | None:intergenic | 20.0% |
!!! | TCATAGATTGTTTTTTATAG+TGG | - | chr1.3:78742869-78742888 | None:intergenic | 20.0% |
!!! | TCTTGTTATATACTTGAATA+TGG | + | chr1.3:78742608-78742627 | MS.gene029108:intron | 20.0% |
!!! | TGTATTTTGAGAGTAATAAT+GGG | - | chr1.3:78746010-78746029 | None:intergenic | 20.0% |
!!! | TTTTAGTTTGAGAAATGATA+AGG | - | chr1.3:78744504-78744523 | None:intergenic | 20.0% |
! | AAATTCCAACTAAATATGAG+GGG | - | chr1.3:78744406-78744425 | None:intergenic | 25.0% |
! | AAGTAAGGACTAAATTTACA+AGG | - | chr1.3:78742048-78742067 | None:intergenic | 25.0% |
! | AATAAATAAGCTATGTCATG+GGG | - | chr1.3:78741353-78741372 | None:intergenic | 25.0% |
! | AATTGAAAAGCTTACAACAA+TGG | - | chr1.3:78745326-78745345 | None:intergenic | 25.0% |
! | AATTGGAAATCAATTAGACT+AGG | - | chr1.3:78744605-78744624 | None:intergenic | 25.0% |
! | ACTTATTACTGTATATGTGA+TGG | - | chr1.3:78741781-78741800 | None:intergenic | 25.0% |
! | AGTGCAGAAAAACAAAATTA+GGG | + | chr1.3:78742402-78742421 | MS.gene029108:intron | 25.0% |
! | ATAAATAAAATCAGCTGTAG+CGG | + | chr1.3:78745627-78745646 | MS.gene029108:intron | 25.0% |
! | ATATACATAAAATTTAGGGG+AGG | + | chr1.3:78745862-78745881 | MS.gene029108:intron | 25.0% |
! | ATTAAATTACTTACTGTCCA+TGG | - | chr1.3:78741000-78741019 | None:intergenic | 25.0% |
! | CAAAAAAGGAACAAATACAA+AGG | + | chr1.3:78743444-78743463 | MS.gene029108:intron | 25.0% |
! | CAAATAAATAAGCTATGTCA+TGG | - | chr1.3:78741355-78741374 | None:intergenic | 25.0% |
! | CAAGAAGCTACAAAATATAA+CGG | - | chr1.3:78742701-78742720 | None:intergenic | 25.0% |
! | CAATTATGTTCCATGTTATT+TGG | - | chr1.3:78745537-78745556 | None:intergenic | 25.0% |
! | CATTTCACCTATTAAATCAA+GGG | - | chr1.3:78742933-78742952 | None:intergenic | 25.0% |
! | GAAAGAATAGTATGTATGTA+TGG | - | chr1.3:78741680-78741699 | None:intergenic | 25.0% |
! | GAAATTCCAACTAAATATGA+GGG | - | chr1.3:78744407-78744426 | None:intergenic | 25.0% |
! | GAGAAAAGGGAAAAAAAATA+TGG | - | chr1.3:78743847-78743866 | None:intergenic | 25.0% |
! | GTAATTTCCTTCAAAAACAA+TGG | - | chr1.3:78744437-78744456 | None:intergenic | 25.0% |
! | GTATATGGTATAGATTATGA+AGG | + | chr1.3:78741138-78741157 | MS.gene029108:CDS | 25.0% |
! | GTTATATACTTGAATATGGA+GGG | + | chr1.3:78742612-78742631 | MS.gene029108:intron | 25.0% |
! | TAGCTTATTTATTTGTCCTT+TGG | + | chr1.3:78741360-78741379 | MS.gene029108:intron | 25.0% |
! | TCACCATGTAAAATCAAAAA+AGG | - | chr1.3:78746674-78746693 | None:intergenic | 25.0% |
! | TGAAATATGTATAGCATGTT+TGG | - | chr1.3:78742777-78742796 | None:intergenic | 25.0% |
! | TGAAATTCCAACTAAATATG+AGG | - | chr1.3:78744408-78744427 | None:intergenic | 25.0% |
! | TGTACAATCTGTTTCATTTA+TGG | - | chr1.3:78744209-78744228 | None:intergenic | 25.0% |
! | TGTTATATACTTGAATATGG+AGG | + | chr1.3:78742611-78742630 | MS.gene029108:intron | 25.0% |
! | TTATATACTTGAATATGGAG+GGG | + | chr1.3:78742613-78742632 | MS.gene029108:intron | 25.0% |
! | TTGCACAAAAAAAAATTGAG+TGG | + | chr1.3:78745554-78745573 | MS.gene029108:intron | 25.0% |
! | TTGGCTAAATAAGATATGAA+TGG | + | chr1.3:78741379-78741398 | MS.gene029108:intron | 25.0% |
!! | AATACAATCTCCAAATTTTC+TGG | - | chr1.3:78746815-78746834 | None:intergenic | 25.0% |
!! | ATTAATAAGTCACTTTCTGA+AGG | - | chr1.3:78745006-78745025 | None:intergenic | 25.0% |
!! | CTTTTTCTTATAATAAGGAC+CGG | - | chr1.3:78743503-78743522 | None:intergenic | 25.0% |
!! | TATTTGTTAGGAGAATCAAT+GGG | + | chr1.3:78741502-78741521 | MS.gene029108:CDS | 25.0% |
!! | TTCATATCTTATTTAGCCAA+AGG | - | chr1.3:78741379-78741398 | None:intergenic | 25.0% |
!! | TTGTTTCTTATAATAAGGAC+CGG | + | chr1.3:78743612-78743631 | MS.gene029108:intron | 25.0% |
!!! | AAATATGCCATTGTTTTTGA+AGG | + | chr1.3:78744427-78744446 | MS.gene029108:intron | 25.0% |
!!! | AGACATTTTTAATTGGATAG+AGG | + | chr1.3:78746838-78746857 | MS.gene029108:CDS | 25.0% |
!!! | CTTCCTTTTTTGATTTTACA+TGG | + | chr1.3:78746668-78746687 | MS.gene029108:CDS | 25.0% |
!!! | GTGTATTTTGAGAGTAATAA+TGG | - | chr1.3:78746011-78746030 | None:intergenic | 25.0% |
!!! | TAGTACTGTCTTTTTTATGA+TGG | + | chr1.3:78745265-78745284 | MS.gene029108:intron | 25.0% |
!!! | TCAATTAGACTAGGTTTTAT+AGG | - | chr1.3:78744596-78744615 | None:intergenic | 25.0% |
!!! | TTTCCTTAATTTTGTTTTGC+AGG | + | chr1.3:78740663-78740682 | MS.gene029108:intron | 25.0% |
!!! | TTTTTTGATTTTACATGGTG+AGG | + | chr1.3:78746673-78746692 | MS.gene029108:CDS | 25.0% |
AAAAAAAAAAAGGAGAGACG+TGG | + | chr1.3:78742966-78742985 | MS.gene029108:intron | 30.0% | |
AAATACCCCTCATATTTAGT+TGG | + | chr1.3:78744398-78744417 | MS.gene029108:intron | 30.0% | |
AACAGGGACTAAAATAAGTA+AGG | - | chr1.3:78742063-78742082 | None:intergenic | 30.0% | |
AACATCATCGTATAATAGGA+AGG | + | chr1.3:78745583-78745602 | MS.gene029108:intron | 30.0% | |
AAGAGAGATTAACAGAAAAG+AGG | - | chr1.3:78743920-78743939 | None:intergenic | 30.0% | |
AAGAGGAAAACATTGTTTGT+TGG | - | chr1.3:78743903-78743922 | None:intergenic | 30.0% | |
AAGGACATGGAAAATCATAT+GGG | + | chr1.3:78741157-78741176 | MS.gene029108:CDS | 30.0% | |
ACAATTGAACACCCTAAATT+GGG | + | chr1.3:78743003-78743022 | MS.gene029108:intron | 30.0% | |
ACATCATCGTATAATAGGAA+GGG | + | chr1.3:78745584-78745603 | MS.gene029108:intron | 30.0% | |
ATAGAGGAAAGATCTCAATA+TGG | + | chr1.3:78746854-78746873 | MS.gene029108:CDS | 30.0% | |
ATCAAAGTAAACTCACGTTT+AGG | + | chr1.3:78742672-78742691 | MS.gene029108:intron | 30.0% | |
ATGTATTATACTCCACACAA+TGG | + | chr1.3:78743258-78743277 | MS.gene029108:intron | 30.0% | |
ATTGTGTGGAGTATAATACA+TGG | - | chr1.3:78743259-78743278 | None:intergenic | 30.0% | |
CAAGATTAGAACACTATGAA+AGG | + | chr1.3:78742142-78742161 | MS.gene029108:intron | 30.0% | |
CAATTTAAGCACCCAATTTA+GGG | - | chr1.3:78743017-78743036 | None:intergenic | 30.0% | |
CAGTGCAGAAAAACAAAATT+AGG | + | chr1.3:78742401-78742420 | MS.gene029108:intron | 30.0% | |
CCATTTCACCTATTAAATCA+AGG | - | chr1.3:78742934-78742953 | None:intergenic | 30.0% | |
CCTTGATTTAATAGGTGAAA+TGG | + | chr1.3:78742931-78742950 | MS.gene029108:intron | 30.0% | |
GAGAAACATCATCGTATAAT+AGG | + | chr1.3:78745579-78745598 | MS.gene029108:intron | 30.0% | |
GCAATTTGAATAAAGTCACA+CGG | + | chr1.3:78745042-78745061 | MS.gene029108:intron | 30.0% | |
GCACATTATAGTATATGATG+TGG | - | chr1.3:78741656-78741675 | None:intergenic | 30.0% | |
TAAACTCAGTCGTAAAAAGA+AGG | - | chr1.3:78746106-78746125 | None:intergenic | 30.0% | |
TCAAAATTCTTAACAAGACC+AGG | - | chr1.3:78741186-78741205 | None:intergenic | 30.0% | |
TCAATTTAAGCACCCAATTT+AGG | - | chr1.3:78743018-78743037 | None:intergenic | 30.0% | |
TCATTTACATGATCTTGTCA+CGG | + | chr1.3:78742797-78742816 | MS.gene029108:intron | 30.0% | |
TGATATCAAATTGCTGCTAA+CGG | + | chr1.3:78745799-78745818 | MS.gene029108:intron | 30.0% | |
TGGATAAAAAAAATAGGGTG+CGG | - | chr1.3:78745517-78745536 | None:intergenic | 30.0% | |
TGTATTATACTCCACACAAT+GGG | + | chr1.3:78743259-78743278 | MS.gene029108:intron | 30.0% | |
TTGTGTGGAGTATAATACAT+GGG | - | chr1.3:78743258-78743277 | None:intergenic | 30.0% | |
! | AAGAAGATGAGGTATTTGTT+AGG | + | chr1.3:78741490-78741509 | MS.gene029108:CDS | 30.0% |
! | ACTAACGGTGTTAAATGAAA+AGG | - | chr1.3:78745222-78745241 | None:intergenic | 30.0% |
! | CACATGAAGATTAATGCTTT+TGG | - | chr1.3:78740948-78740967 | None:intergenic | 30.0% |
! | CTAACGGTGTTAAATGAAAA+GGG | - | chr1.3:78745221-78745240 | None:intergenic | 30.0% |
! | CTTCTACTATGATAATGAGA+AGG | + | chr1.3:78744913-78744932 | MS.gene029108:intron | 30.0% |
! | GAAAAGCCAGGTATAAATTT+TGG | + | chr1.3:78745734-78745753 | MS.gene029108:intron | 30.0% |
! | GTATTTGTTAGGAGAATCAA+TGG | + | chr1.3:78741501-78741520 | MS.gene029108:CDS | 30.0% |
! | TTGTTGATGTACTTGCTAAA+CGG | + | chr1.3:78746040-78746059 | MS.gene029108:intron | 30.0% |
!! | TACAAGGTCGCTATTTTATA+GGG | - | chr1.3:78742032-78742051 | None:intergenic | 30.0% |
!! | TGATGTTGGTGTTATTTCTT+TGG | + | chr1.3:78745703-78745722 | MS.gene029108:intron | 30.0% |
!! | TTACAAGGTCGCTATTTTAT+AGG | - | chr1.3:78742033-78742052 | None:intergenic | 30.0% |
AAAAAGCCAGAATATTGGGA+CGG | + | chr1.3:78741553-78741572 | MS.gene029108:CDS | 35.0% | |
AACAGGTTATGAACTTAGCA+GGG | + | chr1.3:78746607-78746626 | MS.gene029108:CDS | 35.0% | |
AACTGACATCAAATACGAAG+AGG | + | chr1.3:78740693-78740712 | MS.gene029108:CDS | 35.0% | |
AAGAAAGAAACGTGCAAACA+CGG | - | chr1.3:78741728-78741747 | None:intergenic | 35.0% | |
AAGACACTGAAATTATACCC+TGG | + | chr1.3:78746758-78746777 | MS.gene029108:CDS | 35.0% | |
AAGATTCTGCAGGTTTCTTA+CGG | - | chr1.3:78745420-78745439 | None:intergenic | 35.0% | |
AAGTAAGGACTAAACTCACA+AGG | + | chr1.3:78742446-78742465 | MS.gene029108:intron | 35.0% | |
ACATGGAAATAAGATTCTGC+AGG | - | chr1.3:78745430-78745449 | None:intergenic | 35.0% | |
ACGTGATATTGAGATAACGA+AGG | - | chr1.3:78744965-78744984 | None:intergenic | 35.0% | |
ATATACAGTGATGTCGTGAT+CGG | - | chr1.3:78744062-78744081 | None:intergenic | 35.0% | |
ATATACCTGTTGTCTGACTT+CGG | - | chr1.3:78746404-78746423 | None:intergenic | 35.0% | |
ATCTCAGCCCTTGATTTAAT+AGG | + | chr1.3:78742923-78742942 | MS.gene029108:intron | 35.0% | |
ATGCAAAATGAAGACAGAGA+GGG | + | chr1.3:78743202-78743221 | MS.gene029108:intron | 35.0% | |
ATGCAACGTCAATGATATCT+TGG | - | chr1.3:78746372-78746391 | None:intergenic | 35.0% | |
ATGTGGCATGGTTTATTGTA+TGG | + | chr1.3:78746782-78746801 | MS.gene029108:CDS | 35.0% | |
CAACACAAATACGACATCAA+GGG | - | chr1.3:78744467-78744486 | None:intergenic | 35.0% | |
CACAATTGAACACCCTAAAT+TGG | + | chr1.3:78743002-78743021 | MS.gene029108:intron | 35.0% | |
CAGACACACATGTGAAATAT+GGG | - | chr1.3:78743726-78743745 | None:intergenic | 35.0% | |
CAGAGTCCAAAATTTATACC+TGG | - | chr1.3:78745743-78745762 | None:intergenic | 35.0% | |
CTCATCTTCTTCTTATTCTC+CGG | - | chr1.3:78741481-78741500 | None:intergenic | 35.0% | |
GAAGGACATGGAAAATCATA+TGG | + | chr1.3:78741156-78741175 | MS.gene029108:CDS | 35.0% | |
GAGCAAACAATTACATGAAG+TGG | + | chr1.3:78746721-78746740 | MS.gene029108:CDS | 35.0% | |
GATTTCGTATTGAATTCACG+AGG | + | chr1.3:78740879-78740898 | MS.gene029108:CDS | 35.0% | |
GCAAATCAATACTGCTTCAA+AGG | + | chr1.3:78746569-78746588 | MS.gene029108:CDS | 35.0% | |
GCATTAATCTTCATGTGTCA+TGG | + | chr1.3:78740951-78740970 | MS.gene029108:CDS | 35.0% | |
GGCAGAAATATTCAATCCTT+TGG | - | chr1.3:78745305-78745324 | None:intergenic | 35.0% | |
GGTATAGATTATGAAGGACA+TGG | + | chr1.3:78741144-78741163 | MS.gene029108:CDS | 35.0% | |
GTATTATACTCCACACAATG+GGG | + | chr1.3:78743260-78743279 | MS.gene029108:intron | 35.0% | |
TACCACATATGCTGCTAAAA+TGG | - | chr1.3:78741233-78741252 | None:intergenic | 35.0% | |
TCAGACACACATGTGAAATA+TGG | - | chr1.3:78743727-78743746 | None:intergenic | 35.0% | |
TCGCCTGCAAAACAAAATTA+AGG | - | chr1.3:78740669-78740688 | None:intergenic | 35.0% | |
TGAAATTATACCCTGGAATG+TGG | + | chr1.3:78746765-78746784 | MS.gene029108:CDS | 35.0% | |
TGCAACGTCAATGATATCTT+GGG | - | chr1.3:78746371-78746390 | None:intergenic | 35.0% | |
TGTAATTGTTTGCTCACTGA+TGG | - | chr1.3:78746716-78746735 | None:intergenic | 35.0% | |
TGTCATTAAAAGAGACCTCA+GGG | - | chr1.3:78745130-78745149 | None:intergenic | 35.0% | |
TTAAATCAAGGGCTGAGATT+TGG | - | chr1.3:78742922-78742941 | None:intergenic | 35.0% | |
TTACGGTAAAATGAGTGATG+TGG | - | chr1.3:78743051-78743070 | None:intergenic | 35.0% | |
TTCTTATAATAAGGACCGGA+GGG | + | chr1.3:78743616-78743635 | MS.gene029108:intron | 35.0% | |
TTCTTATAATAAGGACCGGA+GGG | - | chr1.3:78743635-78743616 | None:intergenic | 35.0% | |
TTCTTATTGAATACTCCCTC+CGG | - | chr1.3:78743634-78743653 | None:intergenic | 35.0% | |
TTTCTTATAATAAGGACCGG+AGG | + | chr1.3:78743615-78743634 | MS.gene029108:intron | 35.0% | |
TTTCTTATAATAAGGACCGG+AGG | - | chr1.3:78743634-78743615 | None:intergenic | 35.0% | |
! | ACAATCTCCAAATTTTCTGG+TGG | - | chr1.3:78746812-78746831 | None:intergenic | 35.0% |
! | CAATTTAGGGTGTTCAATTG+TGG | - | chr1.3:78743004-78743023 | None:intergenic | 35.0% |
! | TATCCTCACATTTTCTTCTC+AGG | - | chr1.3:78743359-78743378 | None:intergenic | 35.0% |
! | TCTCTGTCTTCATTTTGCAT+GGG | - | chr1.3:78743202-78743221 | None:intergenic | 35.0% |
!! | AATGGTGGATATGCAGTATA+TGG | + | chr1.3:78741123-78741142 | MS.gene029108:CDS | 35.0% |
!! | ATATCGACTTCTGACCTATT+GGG | + | chr1.3:78744078-78744097 | MS.gene029108:intron | 35.0% |
!! | ATTTTAAAAGAACTCAGGGG+AGG | - | chr1.3:78745187-78745206 | None:intergenic | 35.0% |
!! | CACAAGGTCGCTATTTTATA+GGG | + | chr1.3:78742462-78742481 | MS.gene029108:intron | 35.0% |
!! | TATATCGACTTCTGACCTAT+TGG | + | chr1.3:78744077-78744096 | MS.gene029108:intron | 35.0% |
!! | TCACAAGGTCGCTATTTTAT+AGG | + | chr1.3:78742461-78742480 | MS.gene029108:intron | 35.0% |
!! | TGTTGGTGTTATTTCTTTGG+AGG | + | chr1.3:78745706-78745725 | MS.gene029108:intron | 35.0% |
!! | TTTTATGCAACTTGCTCACA+TGG | - | chr1.3:78745447-78745466 | None:intergenic | 35.0% |
!!! | TTTGCGATAATTTTTTGCGG+AGG | + | chr1.3:78742277-78742296 | MS.gene029108:intron | 35.0% |
AAACGAGATCTGAATAGCAG+CGG | + | chr1.3:78744148-78744167 | MS.gene029108:intron | 40.0% | |
AATAAACCATGCCACATTCC+AGG | - | chr1.3:78746779-78746798 | None:intergenic | 40.0% | |
AATAGGGTGCGGTTCATAAT+TGG | - | chr1.3:78745506-78745525 | None:intergenic | 40.0% | |
ACCGGAAAAAGCCAGAATAT+TGG | + | chr1.3:78741548-78741567 | MS.gene029108:CDS | 40.0% | |
ACGTCAATGATATCTTGGGT+TGG | - | chr1.3:78746367-78746386 | None:intergenic | 40.0% | |
ACTGCAAGAAGACTAGCAAA+TGG | + | chr1.3:78741105-78741124 | MS.gene029108:CDS | 40.0% | |
AGACGAATCACACAACGAAT+TGG | - | chr1.3:78745678-78745697 | None:intergenic | 40.0% | |
AGATTCTGCAGGTTTCTTAC+GGG | - | chr1.3:78745419-78745438 | None:intergenic | 40.0% | |
AGTACAGCGCACATCAAATT+TGG | + | chr1.3:78741801-78741820 | MS.gene029108:intron | 40.0% | |
ATAAACCATGCCACATTCCA+GGG | - | chr1.3:78746778-78746797 | None:intergenic | 40.0% | |
ATACGCATCACAAATGCGTT+TGG | - | chr1.3:78746301-78746320 | None:intergenic | 40.0% | |
ATATGATCATGCACTCCACT+AGG | + | chr1.3:78743376-78743395 | MS.gene029108:intron | 40.0% | |
CACATATGCTGCTAAAATGG+CGG | - | chr1.3:78741230-78741249 | None:intergenic | 40.0% | |
CATCCTGAGAAGAAAATGTG+AGG | + | chr1.3:78743353-78743372 | MS.gene029108:intron | 40.0% | |
CATCGTATAATAGGAAGGGA+CGG | + | chr1.3:78745588-78745607 | MS.gene029108:intron | 40.0% | |
CATGCAAAATGAAGACAGAG+AGG | + | chr1.3:78743201-78743220 | MS.gene029108:intron | 40.0% | |
CCAACACAAATACGACATCA+AGG | - | chr1.3:78744468-78744487 | None:intergenic | 40.0% | |
CCGGAAAAAGCCAGAATATT+GGG | + | chr1.3:78741549-78741568 | MS.gene029108:CDS | 40.0% | |
CCTTGATGTCGTATTTGTGT+TGG | + | chr1.3:78744465-78744484 | MS.gene029108:intron | 40.0% | |
CGGAGAATAAGAAGAAGATG+AGG | + | chr1.3:78741479-78741498 | MS.gene029108:CDS | 40.0% | |
CGTCAATGATATCTTGGGTT+GGG | - | chr1.3:78746366-78746385 | None:intergenic | 40.0% | |
GAACAGGTTATGAACTTAGC+AGG | + | chr1.3:78746606-78746625 | MS.gene029108:CDS | 40.0% | |
GACGAATCACACAACGAATT+GGG | - | chr1.3:78745677-78745696 | None:intergenic | 40.0% | |
GATGGAACAACAAACATGTG+TGG | - | chr1.3:78741763-78741782 | None:intergenic | 40.0% | |
GTATAATACATGGGTGGCTA+TGG | - | chr1.3:78743249-78743268 | None:intergenic | 40.0% | |
GTCATTAAAAGAGACCTCAG+GGG | - | chr1.3:78745129-78745148 | None:intergenic | 40.0% | |
TATACCTGTTGTCTGACTTC+GGG | - | chr1.3:78746403-78746422 | None:intergenic | 40.0% | |
TATGATCATGCACTCCACTA+GGG | + | chr1.3:78743377-78743396 | MS.gene029108:intron | 40.0% | |
TCATAACCTGTTCTCAAACG+AGG | - | chr1.3:78746599-78746618 | None:intergenic | 40.0% | |
TGTCTGAGAATTGAGATGAG+AGG | + | chr1.3:78743740-78743759 | MS.gene029108:intron | 40.0% | |
TGTGGAGTATAATACATGGG+TGG | - | chr1.3:78743255-78743274 | None:intergenic | 40.0% | |
TTCACGAGGAATGAAGCTAT+TGG | + | chr1.3:78740893-78740912 | MS.gene029108:CDS | 40.0% | |
TTCGTTGTGTGATTCGTCTA+TGG | + | chr1.3:78745679-78745698 | MS.gene029108:intron | 40.0% | |
TTGTTAGGAGAATCAATGGG+AGG | + | chr1.3:78741505-78741524 | MS.gene029108:CDS | 40.0% | |
! | AATGGGGTGCCTATTTAATG+TGG | + | chr1.3:78743276-78743295 | MS.gene029108:intron | 40.0% |
! | ATGTGCTACTGTGTGAGAAA+AGG | - | chr1.3:78743861-78743880 | None:intergenic | 40.0% |
! | CTCTCTGTCTTCATTTTGCA+TGG | - | chr1.3:78743203-78743222 | None:intergenic | 40.0% |
! | GATTCGTCTATGGTTGATGT+TGG | + | chr1.3:78745689-78745708 | MS.gene029108:intron | 40.0% |
! | GATTTGGAGTCTCATGTGAT+AGG | - | chr1.3:78742906-78742925 | None:intergenic | 40.0% |
! | GCTTTTGGATTTTCGTTTGC+AGG | - | chr1.3:78740933-78740952 | None:intergenic | 40.0% |
! | GGAAAATCATATGGGTTACC+TGG | + | chr1.3:78741165-78741184 | MS.gene029108:CDS | 40.0% |
! | GTGTCATTAAAAGAGACCTC+AGG | - | chr1.3:78745131-78745150 | None:intergenic | 40.0% |
! | TGTGCTACTGTGTGAGAAAA+GGG | - | chr1.3:78743860-78743879 | None:intergenic | 40.0% |
! | TTAGGGTGTTCAATTGTGGA+TGG | - | chr1.3:78743000-78743019 | None:intergenic | 40.0% |
!!! | ATATTGGGACGGTGCTATTT+TGG | + | chr1.3:78741564-78741583 | MS.gene029108:CDS | 40.0% |
!!! | CCCAATATTCTGGCTTTTTC+CGG | - | chr1.3:78741552-78741571 | None:intergenic | 40.0% |
AATTACACTGATCTCCCCTG+AGG | + | chr1.3:78745112-78745131 | MS.gene029108:intron | 45.0% | |
ACTCTATGCCCAAAAGTCAG+AGG | - | chr1.3:78744939-78744958 | None:intergenic | 45.0% | |
AGGTCTTTGTCAAGTGAGAG+GGG | + | chr1.3:78745828-78745847 | MS.gene029108:intron | 45.0% | |
AGTGTGATACATACTCCCTC+CGG | + | chr1.3:78743481-78743500 | MS.gene029108:intron | 45.0% | |
ATACCTGTTGTCTGACTTCG+GGG | - | chr1.3:78746402-78746421 | None:intergenic | 45.0% | |
ATAGCACCGTCCCAATATTC+TGG | - | chr1.3:78741562-78741581 | None:intergenic | 45.0% | |
ATCAAATTGCTGCTAACGGC+AGG | + | chr1.3:78745803-78745822 | MS.gene029108:intron | 45.0% | |
CAACTCTCTCTTTCTCTCAC+CGG | + | chr1.3:78743944-78743963 | MS.gene029108:intron | 45.0% | |
CACCATTGTGGATGGTGTAA+GGG | + | chr1.3:78743319-78743338 | MS.gene029108:intron | 45.0% | |
CAGGGTTGCTACACAAATTG+AGG | + | chr1.3:78746625-78746644 | MS.gene029108:CDS | 45.0% | |
CATGTGTCATGGATATGCCA+TGG | + | chr1.3:78740962-78740981 | MS.gene029108:CDS | 45.0% | |
CCTGGGAAAGAAAAAGAGTG+AGG | + | chr1.3:78745769-78745788 | MS.gene029108:intron | 45.0% | |
CGGTGAGAGCTAATGTTCAA+AGG | - | chr1.3:78744042-78744061 | None:intergenic | 45.0% | |
CTTACACCATCCACAATGGT+GGG | - | chr1.3:78743320-78743339 | None:intergenic | 45.0% | |
CTTCTCACCACTGTCATCAT+CGG | - | chr1.3:78744232-78744251 | None:intergenic | 45.0% | |
CTTCTGACCTATTGGGTTTC+AGG | + | chr1.3:78744085-78744104 | MS.gene029108:intron | 45.0% | |
GAGGTCTTTGTCAAGTGAGA+GGG | + | chr1.3:78745827-78745846 | MS.gene029108:intron | 45.0% | |
GATGATGACAGTGGTGAGAA+GGG | + | chr1.3:78744231-78744250 | MS.gene029108:intron | 45.0% | |
GCAAAGCTAACCTTGCACAT+TGG | - | chr1.3:78741595-78741614 | None:intergenic | 45.0% | |
GCAAGAAGACTAGCAAATGG+TGG | + | chr1.3:78741108-78741127 | MS.gene029108:CDS | 45.0% | |
GGGTGTGAGAGATATACATG+AGG | + | chr1.3:78743397-78743416 | MS.gene029108:intron | 45.0% | |
GGTAAACCTCGTTTGAGAAC+AGG | + | chr1.3:78746590-78746609 | MS.gene029108:CDS | 45.0% | |
GGTGCGGTTCATAATTGGTT+CGG | - | chr1.3:78745501-78745520 | None:intergenic | 45.0% | |
GTATATCTCTCACACCCTAG+TGG | - | chr1.3:78743394-78743413 | None:intergenic | 45.0% | |
GTTGGGACTATTTGCCATGT+GGG | - | chr1.3:78746349-78746368 | None:intergenic | 45.0% | |
TAAATAGGCACCCCATTGTG+TGG | - | chr1.3:78743273-78743292 | None:intergenic | 45.0% | |
TAAGCAAAGTTGCTCCCACA+TGG | + | chr1.3:78746332-78746351 | MS.gene029108:CDS | 45.0% | |
TACCCTTACACCATCCACAA+TGG | - | chr1.3:78743324-78743343 | None:intergenic | 45.0% | |
TCAAATTGCTGCTAACGGCA+GGG | + | chr1.3:78745804-78745823 | MS.gene029108:intron | 45.0% | |
TGAAGCTATTGGCAACCAGT+TGG | + | chr1.3:78740904-78740923 | MS.gene029108:CDS | 45.0% | |
TGAGAGAAAGAGAGAGTTGC+AGG | - | chr1.3:78743943-78743962 | None:intergenic | 45.0% | |
TGGTGAGCCACCAGAAAATT+TGG | + | chr1.3:78746802-78746821 | MS.gene029108:CDS | 45.0% | |
TTATACCCTGGAATGTGGCA+TGG | + | chr1.3:78746770-78746789 | MS.gene029108:CDS | 45.0% | |
TTCGTTTGCAGGAATCCAAC+TGG | - | chr1.3:78740922-78740941 | None:intergenic | 45.0% | |
TTGGAGGAAACTGAAAAGCC+AGG | + | chr1.3:78745722-78745741 | MS.gene029108:intron | 45.0% | |
TTGTACACCGATGATGACAG+TGG | + | chr1.3:78744222-78744241 | MS.gene029108:intron | 45.0% | |
TTTGGACTCTGACTGTTCCT+GGG | + | chr1.3:78745752-78745771 | MS.gene029108:intron | 45.0% | |
! | ATGAGAAGGCCTCTGACTTT+TGG | + | chr1.3:78744927-78744946 | MS.gene029108:intron | 45.0% |
! | CCTCACTCTTTTTCTTTCCC+AGG | - | chr1.3:78745772-78745791 | None:intergenic | 45.0% |
! | GGCAGTCTTTTCTGTACCAA+AGG | + | chr1.3:78745286-78745305 | MS.gene029108:intron | 45.0% |
! | TGAGAAGGCCTCTGACTTTT+GGG | + | chr1.3:78744928-78744947 | MS.gene029108:intron | 45.0% |
! | TTTTGGACTCTGACTGTTCC+TGG | + | chr1.3:78745751-78745770 | MS.gene029108:intron | 45.0% |
!! | AGCTGTAGCGGACAAAAAGA+TGG | + | chr1.3:78745639-78745658 | MS.gene029108:intron | 45.0% |
!! | AGGTGTTGGGTTGCAGAAAA+TGG | - | chr1.3:78743087-78743106 | None:intergenic | 45.0% |
!! | CGCCATTTTAGCAGCATATG+TGG | + | chr1.3:78741228-78741247 | MS.gene029108:CDS | 45.0% |
!! | GCTGTAGCGGACAAAAAGAT+GGG | + | chr1.3:78745640-78745659 | MS.gene029108:intron | 45.0% |
!! | AATAATCATAATAAAAAAAA+GGG | + | chr1.3:78745087-78745106 | MS.gene029108:intron | 5.0% |
!! | TTTATTAAGATTTATTAAAT+GGG | + | chr1.3:78743175-78743194 | MS.gene029108:intron | 5.0% |
!!! | AGAATTAATTTTTTTTTTTT+GGG | - | chr1.3:78745901-78745920 | None:intergenic | 5.0% |
!!! | TTTTATTAAGATTTATTAAA+TGG | + | chr1.3:78743174-78743193 | MS.gene029108:intron | 5.0% |
AAGGCACAGTGAGAGAGAGT+AGG | - | chr1.3:78744023-78744042 | None:intergenic | 50.0% | |
ACATGGGTGGCTATGGAGAA+GGG | - | chr1.3:78743242-78743261 | None:intergenic | 50.0% | |
ACCTATTGGGTTTCAGGAGG+CGG | + | chr1.3:78744091-78744110 | MS.gene029108:intron | 50.0% | |
AGAATCAATGGGAGGAGCTG+TGG | + | chr1.3:78741513-78741532 | MS.gene029108:CDS | 50.0% | |
ATCTGAATAGCAGCGGTCGA+CGG | + | chr1.3:78744155-78744174 | MS.gene029108:intron | 50.0% | |
CAAATTGCTGCTAACGGCAG+GGG | + | chr1.3:78745805-78745824 | MS.gene029108:intron | 50.0% | |
CAGAGGAGAACGATGGTTGT+CGG | + | chr1.3:78744120-78744139 | MS.gene029108:intron | 50.0% | |
CATGGAATGCAGCATCACCA+TGG | + | chr1.3:78740980-78740999 | MS.gene029108:CDS | 50.0% | |
CCACCATTGTGGATGGTGTA+AGG | + | chr1.3:78743318-78743337 | MS.gene029108:intron | 50.0% | |
CCTTACACCATCCACAATGG+TGG | - | chr1.3:78743321-78743340 | None:intergenic | 50.0% | |
CGATGATGACAGTGGTGAGA+AGG | + | chr1.3:78744230-78744249 | MS.gene029108:intron | 50.0% | |
CTGACCTATTGGGTTTCAGG+AGG | + | chr1.3:78744088-78744107 | MS.gene029108:intron | 50.0% | |
GCTATGGAGAAGGGTGACTA+TGG | - | chr1.3:78743233-78743252 | None:intergenic | 50.0% | |
GGAGGTCTTTGTCAAGTGAG+AGG | + | chr1.3:78745826-78745845 | MS.gene029108:intron | 50.0% | |
GGTTGGGACTATTTGCCATG+TGG | - | chr1.3:78746350-78746369 | None:intergenic | 50.0% | |
GTCGACGACATAACAGTTGC+CGG | - | chr1.3:78743966-78743985 | None:intergenic | 50.0% | |
GTGGTGACTGATGAGGATGA+CGG | + | chr1.3:78744256-78744275 | MS.gene029108:intron | 50.0% | |
TACATGGGTGGCTATGGAGA+AGG | - | chr1.3:78743243-78743262 | None:intergenic | 50.0% | |
TCTTTGTCAAGTGAGAGGGG+AGG | + | chr1.3:78745831-78745850 | MS.gene029108:intron | 50.0% | |
TGAGAGAGAGTAGGAGAGAG+TGG | - | chr1.3:78744014-78744033 | None:intergenic | 50.0% | |
TTTGGCTGCACCAATGTGCA+AGG | + | chr1.3:78741582-78741601 | MS.gene029108:CDS | 50.0% | |
! | CATGGTGATGCTGCATTCCA+TGG | - | chr1.3:78740982-78741001 | None:intergenic | 50.0% |
! | GATGACGGTGGTTATGTGGA+CGG | + | chr1.3:78744271-78744290 | MS.gene029108:intron | 50.0% |
! | TGAGGATGACGGTGGTTATG+TGG | + | chr1.3:78744267-78744286 | MS.gene029108:intron | 50.0% |
!! | GGAGGGGTGTATTTTCTACG+TGG | + | chr1.3:78742629-78742648 | MS.gene029108:intron | 50.0% |
ACCGCCTCCTGAAACCCAAT+AGG | - | chr1.3:78744095-78744114 | None:intergenic | 55.0% | |
ACGGTGGTTATGTGGACGGA+GGG | + | chr1.3:78744275-78744294 | MS.gene029108:intron | 55.0% | |
AGGAGAACGATGGTTGTCGG+AGG | + | chr1.3:78744123-78744142 | MS.gene029108:intron | 55.0% | |
AGTCCCCGAAGTCAGACAAC+AGG | + | chr1.3:78746396-78746415 | MS.gene029108:CDS | 55.0% | |
ATGGGAGGGTGGTAGAAGGA+CGG | + | chr1.3:78744318-78744337 | MS.gene029108:intron | 55.0% | |
GATGACAGTGGTGAGAAGGG+TGG | + | chr1.3:78744234-78744253 | MS.gene029108:intron | 55.0% | |
GTGGTTGCAGAGGAGAACGA+TGG | + | chr1.3:78744113-78744132 | MS.gene029108:intron | 55.0% | |
TATTGGGTTTCAGGAGGCGG+TGG | + | chr1.3:78744094-78744113 | MS.gene029108:intron | 55.0% | |
! | AAGGGTGGTGGTGACTGATG+AGG | + | chr1.3:78744249-78744268 | MS.gene029108:intron | 55.0% |
! | AGGTGAAGCACCCACCATTG+TGG | + | chr1.3:78743307-78743326 | MS.gene029108:intron | 55.0% |
! | GAAGCACCCACCATTGTGGA+TGG | + | chr1.3:78743311-78743330 | MS.gene029108:intron | 55.0% |
! | GTGACTGATGAGGATGACGG+TGG | + | chr1.3:78744259-78744278 | MS.gene029108:intron | 55.0% |
!! | CTGTGGCTCTGCTTTTGCAC+CGG | + | chr1.3:78741530-78741549 | MS.gene029108:CDS | 55.0% |
!! | TAGAAGGACGGTGGTGCTGT+TGG | + | chr1.3:78744330-78744349 | MS.gene029108:intron | 55.0% |
ATTGCTGCTAACGGCAGGGG+AGG | + | chr1.3:78745808-78745827 | MS.gene029108:intron | 60.0% | |
CGTCGCTCTCTTGCTCTCAC+CGG | + | chr1.3:78743985-78744004 | MS.gene029108:intron | 60.0% | |
GACAGTGGTGAGAAGGGTGG+TGG | + | chr1.3:78744237-78744256 | MS.gene029108:intron | 60.0% | |
GACGGTGGTTATGTGGACGG+AGG | + | chr1.3:78744274-78744293 | MS.gene029108:intron | 60.0% | |
GAGTAGGAGAGAGTGGTCGC+CGG | - | chr1.3:78744007-78744026 | None:intergenic | 60.0% | |
GGTCATGGGAGGGTGGTAGA+AGG | + | chr1.3:78744314-78744333 | MS.gene029108:intron | 60.0% | |
GGTTATGTGGACGGAGGGTC+CGG | + | chr1.3:78744280-78744299 | MS.gene029108:intron | 60.0% | |
CCATGACCGCCTCTCACCAC+CGG | - | chr1.3:78744302-78744321 | None:intergenic | 65.0% | |
CGGTGGTGAGAGGCGGTCAT+GGG | + | chr1.3:78744300-78744319 | MS.gene029108:intron | 65.0% | |
GGAGGGTGGTAGAAGGACGG+TGG | + | chr1.3:78744321-78744340 | MS.gene029108:intron | 65.0% | |
GGTGAGAGGCGGTCATGGGA+GGG | + | chr1.3:78744304-78744323 | MS.gene029108:intron | 65.0% | |
TATGTGGACGGAGGGTCCGG+TGG | + | chr1.3:78744283-78744302 | MS.gene029108:intron | 65.0% | |
TCAGGAGGCGGTGGTTGCAG+AGG | + | chr1.3:78744103-78744122 | MS.gene029108:intron | 65.0% | |
TGGTGAGAGGCGGTCATGGG+AGG | + | chr1.3:78744303-78744322 | MS.gene029108:intron | 65.0% | |
ACGGAGGGTCCGGTGGTGAG+AGG | + | chr1.3:78744290-78744309 | MS.gene029108:intron | 70.0% | |
CCGGTGGTGAGAGGCGGTCA+TGG | + | chr1.3:78744299-78744318 | MS.gene029108:intron | 70.0% | |
GAGAGGCGGTCATGGGAGGG+TGG | + | chr1.3:78744307-78744326 | MS.gene029108:intron | 70.0% | |
GAGGGTCCGGTGGTGAGAGG+CGG | + | chr1.3:78744293-78744312 | MS.gene029108:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.3 | gene | 78740586 | 78746931 | 78740586 | ID=MS.gene029108 |
chr1.3 | mRNA | 78740586 | 78746931 | 78740586 | ID=MS.gene029108.t1;Parent=MS.gene029108 |
chr1.3 | exon | 78740586 | 78740588 | 78740586 | ID=MS.gene029108.t1.exon1;Parent=MS.gene029108.t1 |
chr1.3 | CDS | 78740586 | 78740588 | 78740586 | ID=cds.MS.gene029108.t1;Parent=MS.gene029108.t1 |
chr1.3 | exon | 78740685 | 78740714 | 78740685 | ID=MS.gene029108.t1.exon2;Parent=MS.gene029108.t1 |
chr1.3 | CDS | 78740685 | 78740714 | 78740685 | ID=cds.MS.gene029108.t1;Parent=MS.gene029108.t1 |
chr1.3 | exon | 78740879 | 78741005 | 78740879 | ID=MS.gene029108.t1.exon3;Parent=MS.gene029108.t1 |
chr1.3 | CDS | 78740879 | 78741005 | 78740879 | ID=cds.MS.gene029108.t1;Parent=MS.gene029108.t1 |
chr1.3 | exon | 78741103 | 78741249 | 78741103 | ID=MS.gene029108.t1.exon4;Parent=MS.gene029108.t1 |
chr1.3 | CDS | 78741103 | 78741249 | 78741103 | ID=cds.MS.gene029108.t1;Parent=MS.gene029108.t1 |
chr1.3 | exon | 78741473 | 78741603 | 78741473 | ID=MS.gene029108.t1.exon5;Parent=MS.gene029108.t1 |
chr1.3 | CDS | 78741473 | 78741603 | 78741473 | ID=cds.MS.gene029108.t1;Parent=MS.gene029108.t1 |
chr1.3 | exon | 78746280 | 78746417 | 78746280 | ID=MS.gene029108.t1.exon6;Parent=MS.gene029108.t1 |
chr1.3 | CDS | 78746280 | 78746417 | 78746280 | ID=cds.MS.gene029108.t1;Parent=MS.gene029108.t1 |
chr1.3 | exon | 78746563 | 78746931 | 78746563 | ID=MS.gene029108.t1.exon7;Parent=MS.gene029108.t1 |
chr1.3 | CDS | 78746563 | 78746931 | 78746563 | ID=cds.MS.gene029108.t1;Parent=MS.gene029108.t1 |
Gene Sequence |
Protein sequence |